cluster # 1178

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Oryza sativa
cluster # 1178 cluster # 1178 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1178#0 length = 544 sequences # 2

consensusID : consensus_1178#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 544
fasta sequence

                              [ACCCTGGTGGTCTTGGTTTGACCCGCTCGGCTGGGGCATCCGGCTCGCCGGAGAAGATCAAGGAGCTGCGCACCAAGGAGATCAAGAACGGGCGGCTCGTCCATGCTCTGCCGTCATGGGAGCTTGGTTGNCAGGCAGAGTACACCGGCACCGGCCCCATGCGGACAAACCTGCTTGCAGCCCATGCTGCGCCGACCCCGGCCACAGCCACCATGCTGTGCCAGGCCTGTGCACCCCCAAATGAGGAGTTGCTTGCAAGGTGTTGGAGTGTTAGCAATGGCTGCCAATGGAGGAAGATGAAAAGACTGTTCGTCGACGCGACTTACCTCTCTTTTTTGGGATCGGAGTAGCTGTGAATGGTGGTGGTGTATTGGGATGTAATTGTGGATGGAGCACTGCATGCCTTGTTGATTGTGTACCTGTACTATGATGTAACCGATGTAAAAAACAAGTTGATACTCTTTTAGAAGTGAAGTTCTCTTCATCACTGAAAAAAAAAAAAAAAAAAATTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BQ907036             [ACCCTGGTGGTCTTGGTTTGACCCGCTCGGCTGGGGCATCCGGCTCGCCGGAGAAGATCAAGGAGCTGCGCACCAAGGAGATCAAGAACGGGCGGCTCGTCCATGCTCTGCCGTCATGGGAGCTTGGTTGNCAGGCAGAGTACACCGGCACCGGCCCCATGCGGACAAACCTGCTTGCAGCCCATGCTGCGCCGACCCCGGCCACAGCCACCATGCTGTGCCAGGCCTGTGCACCCCCAAATGAGGAGTTGCTTGCAAGGTGTTGGAGTGTTAGCAATGGCTGCCAATGGAGGAAGATGAAAAGACTGTTCGTCGACGCGACTTACCTCTCTTTTTTGGGATCGGAGTAGCTGTGAATGGTGGTGGTGTATTGGGATGTAATTGTGGATGGAGCACTGCATGCCTTGTTGATTGTGTACCTGTACTATGATGTAACCGATGTAAAAAACAAGTTGATACTCTTTTAGAAGTGAAGTTCTCTTCATCACTGAA                                                    ]
[+] EMBL CF299687             [                                                                                                                                                                                                                                                                                                                                                                      GGTGGTGGTGTATTGGGATGTAATTGTGGATGGAGCACTGCATGCCTTGTTGATTGTGTACCTGTACTATGATGTAACCGATGTAAAAAACAAGTTGATACTCTTTTAGAAGTGAAGTTCTCTTCATCAAAAAAAAAAAAAAAAAAAAAAATTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_1178#0
ACCCTGGTGGTCTTGGTTTGACCCGCTCGGCTGGGGCATCCGGCTCGCCGGAGAAGATCA
AGGAGCTGCGCACCAAGGAGATCAAGAACGGGCGGCTCGTCCATGCTCTGCCGTCATGGG
AGCTTGGTTGNCAGGCAGAGTACACCGGCACCGGCCCCATGCGGACAAACCTGCTTGCAG
CCCATGCTGCGCCGACCCCGGCCACAGCCACCATGCTGTGCCAGGCCTGTGCACCCCCAA
ATGAGGAGTTGCTTGCAAGGTGTTGGAGTGTTAGCAATGGCTGCCAATGGAGGAAGATGA
AAAGACTGTTCGTCGACGCGACTTACCTCTCTTTTTTGGGATCGGAGTAGCTGTGAATGG
TGGTGGTGTATTGGGATGTAATTGTGGATGGAGCACTGCATGCCTTGTTGATTGTGTACC
TGTACTATGATGTAACCGATGTAAAAAACAAGTTGATACTCTTTTAGAAGTGAAGTTCTC
TTCATCACTGAAAAAAAAAAAAAAAAAAATTTTTTTTAAAAAAAAAAAAAAAAAAAAAAA
AAAA

clustalw multiple alignements is not computed in this case