These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11789#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3669 fasta sequence [CAGCCTGCGCCGCGCGCTACGACTTCCTCAACTCCAAGCCGCCCCCCAACTACGTGGCGAGACTGGGACGCGGCGCCGCCGGGTTCACCACCCGCTCGGATATCGGGCCCGCCATGGGGCGCGGCCGTGGGAAGCCGCCTGGGGACGACGGCGACGGCGATGGCGGTGGCGACGAGGAGGAGAAGGGGTACGACGAGAACCAGAAGTTCGACGAGTTCGAGGGCAACGACGCCGGCCTCTTCTCCAACGCCGGCCACGACGACGACGACGACGACCGCGAGGCGGACGCGGTCTGGGAGGGCATCGACCGGAGGATGGACTCGCGCCGCAAGGACTGGCGAGAGGCGCGGCTGAAGCAGGAGATCGAGAGGTACCGCGCGTCCAACCCTAAAATCACCGAGCAATTCGCCGATCTGAAGCGGAAATTGGTCGATTTGTCAGCGCAGGAGTGGGAGAGCATACCGGAGATTGGGGATTATTCGCTTCGTCGCAACAAGAAGAGGCGATTTGAGAGCTTTGTCCCGGTGCCTGACACCCTGCTCGAGAAGGCCCGGCAGGAGCAGGGGCATGTCACCGCATTGGACCCCAAGAGCCGTGCAGCCGCCGCTGGCGCAGAGACGCCATGGGCGCAGACTCCGGTTACTGATCTGACAGCCGTCGGCGAAGGCCGTGGCACCGTGCTTTCTTTGAAGCTGGACAGGTTATCCGATTCGGTATCCGGTGTTACTATTGTTGATCCAAGGGGTTACCTGACTAACCTGAAGAGTATGAAGATTACTAGTGATGCTGAAATTTCTGACATAAAGAAGGCCAGGTTGTTGCTCAAGTCAGTGATACAGACGAACCCAAAGCATCCACCAGGATGGATTGCTGCTGCTAGGCTTGAAGAGGTTGCCGGCAAGCTTCAGGTTGCTCAGCAGCTCATCCAGCGTGGCTGCGAGGAGTGCCCCACGAATGAGGATGTTTGGCTCAAGGCATGCCGGTTGGCCAGCCCAGATGAGGCAAAGGCCGTGATTGCCAGGGGTGTGAAGGAAATTCCCAATTCTGTGAAGCTGTGGTTGCAGGCAGCGAAGTTGGAAACTAGTGACTTGAATAAGAGCAGGGTTTTGAGAAAAGGGTTGGAACACATTCCTGATTCAGTCAGGCTGTGGAAATCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGGCTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCATTCCATTTGGAACTGTGGCTTGCACTAGCGAGGCTGGAGACGTATGACCAAGCAAAGAAGGTACTTAACAAGGCAAAAGAAAAGCTCCCTAAGGAGCCTGCCATCTGGATTATGGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCGAGTCAGTAAACGAGGTGATTGAGAGAAGTATAAAAACTTTACAGGGAAAAGGATTGGGTATTGACAGGGAGGCATGGCTAAAGGAAGCAGAAGCTGCTGAGCATGCTGGATCTGTGATGACTTGCCAGGCTATTGTGAAGAACACTATTGGCGTTGGTGTTGATGATGAAGACAGAAAACGCACATGGGTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTATGCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTTGAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATACAATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATTGTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGTCATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAACTAATCTAGAGGAGAAGATAAATGGCTTGAGGAAGTCACGTGCTGTTCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCATTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCTTCTTCTGCAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGGTTAGCAATATTCTTGAACTACCATGACCATGTAGACAATATTCTTGAACTACCAGCACCAGACCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTTCGAAGGACCTTCAGCTTCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGAGGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGTCTACAATTTATTTAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGGAAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCAGTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTCATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAGTTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTGATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGATCAGTTT] [+] EMBL AK101040 [CAGCCTGCGCCGCGCGCTACGACTTCCTCAACTCCAAGCCGCCCCCCAACTACGTGGCGAGACTGGGACGCGGCGCCGCCGGGTTCACCACCCGCTCGGATATCGGGCCCGCCATGGGGCGCGGCCGTGGGAAGCCGCCTGGGGACGACGGCGACGGCGATGGCGGTGGCGACGAGGAGGAGAAGGGGTACGACGAGAACCAGAAGTTCGACGAGTTCGAGGGCAACGACGCCGGCCTCTTCTCCAACGCCGGCCACGACGACGACGACGACGACCGCGAGGCGGACGCGGTCTGGGAGGGCATCGACCGGAGGATGGACTCGCGCCGCAAGGACTGGCGAGAGGCGCGGCTGAAGCAGGAGATCGAGAGGTACCGCGCGTCCAACCCTAAAATCACCGAGCAATTCGCCGATCTGAAGCGGAAATTGGTCGATTTGTCAGCGCAGGAGTGGGAGAGCATACCGGAGATTGGGGATTATTCGCTTCGTCGCAACAAGAAGAGGCGATTTGAGAGCTTTGTCCCGGTGCCTGACACCCTGCTCGAGAAGGCCCGGCAGGAGCAGGGGCATGTCACCGCATTGGACCCCAAGAGCCGTGCAGCCGCCGCTGGCGCAGAGACGCCATGGGCGCAGACTCCGGTTACTGATCTGACAGCCGTCGGCGAAGGCCGTGGCACCGTGCTTTCTTTGAAGCTGGACAGGTTATCCGATTCGGTATCCGGTGTTACTATTGTTGATCCAAGGGGTTACCTGACTAACCTGAAGAGTATGAAGATTACTAGTGATGCTGAAATTTCTGACATAAAGAAGGCCAGGTTGTTGCTCAAGTCAGTGATACAGACGAACCCAAAGCATCCACCAGGATGGATTGCTGCTGCTAGGCTTGAAGAGGTTGCCGGCAAGCTTCAGGTTGCTCAGCAGCTCATCCAGCGTGGCTGCGAGGAGTGCCCCACGAATGAGGATGTTTGGCTCAAGGCATGCCGGTTGGCCAGCCCAGATGAGGCAAAGGCCGTGATTGCCAGGGGTGTGAAGGAAATTCCCAATTCTGTGAAGCTGTGGTTGCAGGCAGCGAAGTTGGAAACTAGTGACTTGAATAAGAGCAGGGTTTTGAGAAAAGGGTTGGAACACATTCCTGATTCAGTCAGGCTGTGGAAATCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGGCTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCATTCCATTTGGAACTGTGGCTTGCACTAGCGAGGCTGGAGACGTATGACCAAGCAAAGAAGGTACTTAACAAGGCAAAAGAAAAGCTCCCTAAGGAGCCTGCCATCTGGATTATGGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCGAGTCAGTAAACGAGGTGATTGAGAGAAGTATAAAAACTTTACAGGGAAAAGGATTGGGTATTGACAGGGAGGCATGGCTAAAGGAAGCAGAAGCTGCTGAGCATGCTGGATCTGTGATGACTTGCCAGGCTATTGTGAAGAACACTATTGGCGTTGGTGTTGATGATGAAGACAGAAAACGCACATGGGTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTATGCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTTGAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATACAATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATTGTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGTCATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAACTAATCTAGAGGAGAAGATAAATGGCTTGAGGAAGTCACGTGCTGTTCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCATTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCTTCTTCTGCAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGGTTAGCAATATTCTTGAACTACCATGACCATGTAGACAATATTCTTGAACTACCAGCACCAGACCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTTCGAAGGACCTTCAGCTTCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGAGGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGTCTACAATTTATTTAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGGAAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCAGTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTCATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAGTTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTGATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGATCAGTTT] [+] EMBL OSR08441A [ ATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCgataaag ] [+] EMBL OSR0851A [ ATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAACCAAAGCATGGAGANAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTAGTGGCTCTTGGCCAGGNTGNAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAG ] consensusID : consensus_11789#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2154 fasta sequence [AAAGGTTGGAACACATTCCTGATTCAGTCAGACTGTGGAAAGCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGACTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCACTCCATGTGGAACTGTGGCTTGCCCTAGCAAGGCTGGAGACATATGACCAAGCAAAGAAGGTACTTAACAAGGCAAGAGAAAAGCTTCCTAAGGAACCTGCCATCTGGATTACAGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCCAGTCAGTAATCAAGGTGATTGAGAGAAGTATAAAAACTTTACAGAGAGAAGGATTGGATATTGACAGGGAGGCATGGCTAAAGGAAGCANAAGCTGCTGAGCGTGCTGGATCTGTATTGACTTGCCAGGCTATTGTTAAGAGCACTATTGNGCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGGGTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTATGCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTTGGCTGAAAGCGGCTCAGCTTGAGAAGAGCCATGGAACCAAGGAGTCTCTTTATAATCTCCTCAGAAAGGCTGTTACCTACAATCCACGTGCAGAAGTTTTATGGCTTATGAGTGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCGGCTGCCCGAGCCATTCTTCAGGAAGCTTATGCTTCTCTCCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAGCAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCGATTGTTGAAAGGGAGTTAGGGAATGTAGACGAAGAAAGGAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAGCTGTGGTTAATGCTTGGACAAATGGAAGACCGGCTTGGCCATGGATCCAAGGCAAAGGAGGTTTACGAGAATGCACTGAAGCACTGCCCGAGTTGCATCCCTCTTTGGCTCTCTCTAGCTAATCTAGAGGAGAAGATAAATGGCTTGAGCAAGTCACGTGCTGTCCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTAGGGCTGAATTGAGACATGGGAACAAGAAGGAAGCTGATGCTCTACTAGCCAAGGCATTACAGGAATGCCCGACAAGTGGTATTTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAGCGTAAAGCAAAGAGCTCAGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCTGTGGCCAAACTTTTCTGGCATGATAGGAAGGTTGATAAAGCTAGAAGTTGGTTGAATAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTTGAACTGCAACATGGAAATGCTGATACACAAAAGGATGTCCTACAAAGATGTGTTGCAGCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAACAAAGGCTGTTGAGAACTCACATCTGTCAATTGAGGCCCTTCTGAAGAAAGCTGTGTTGGCTCTTGGCCAGGAAGAAAATCCAAATGCTGCAGATCCCTAGTTTGTCTCACTTTTAACTTTTGATAAGTCTGGTCACAGGTCTAATTCTTCTGCGCATGCTGGCAATGGAATATATAGAGAAAGAAACACAGTTGGGTAGTGAACTGGGATGGACTCGAGCTGCGACCTCGTGATTCTGTGTACCACCGAACTGATTGCTGCACTCCTCCAACCATGAAGCCTTACCTGAAGAAGAATCAGGCATGCGATTACTACAATTTGTATCGGCGATCACCAGTTAAAACCTGTATCGTTTGTATGCCCTAATTGCCAGCAATACTTCTGTACTACCATGAGCATGTTTATTCCTCCAGATGCATACCACAAATTCTTAGATGGGTGTATTTGCTAGCCGCGACTTGGGATGATGTAATTTTTCTTGGGTTCGGTTTATTCTCAGAGCACTGGCGTCTGTATCTACGACTGTAAGATCTGCCTGAATGTCGGCTTAATATATGAGATAATGCCCCATTTTTCTAGCAAAAAAAAA] [+] EMBL CB640930 [AAAGGTTGGAACACATTCCTGATTCAGTCAGACTGTGGAAAGCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGACTGTTGCTTCACAGGGCTGTGGAGTGCTGCCCACTCCATGTGGAACTGTGGCTTGCCCTAGCAAGGCTGGAGACATATGACCAAGCAAAGAAGGTACTTAACAAGGCAAGAGAAAAGCTTCCTAAGGAACCTGCCATCTGGATTACAGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCCAGTCAGTAATCAAGGTGATTGAGAGAAGTATAAAAACTTTACAGAGAGAAGGATTGGATATTGACAGGGAGGCATGGCTAAAGGAAGCANAAGCTGCTGAGCGTGCTGGATCTGTATTGACTTGCCAGGCTATTGTTAAGAGCACTATTGNGCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGGGTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTATGCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTT ] [+] EMBL AK071378 [ GGCTATTGTTAAGAGCACTATTG GCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGGGTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTATGCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTTGGCTGAAAGCGGCTCAGCTTGAGAAGAGCCATGGAACCAAGGAGTCTCTTTATAATCTCCTCAGAAAGGCTGTTACCTACAATCCACGTGCAGAAGTTTTATGGCTTATGAGTGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCGGCTGCCCGAGCCATTCTTCAGGAAGCTTATGCTTCTCTCCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAGCAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCGATTGTTGAAAGGGAGTTAGGGAATGTAGACGAAGAAAGGAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAGCTGTGGTTAATGCTTGGACAAATGGAAGACCGGCTTGGCCATGGATCCAAGGCAAAGGAGGTTTACGAGAATGCACTGAAGCACTGCCCGAGTTGCATCCCTCTTTGGCTCTCTCTAGCTAATCTAGAGGAGAAGATAAATGGCTTGAGCAAGTCACGTGCTGTCCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTAGGGCTGAATTGAGACATGGGAACAAGAAGGAAGCTGATGCTCTACTAGCCAAGGCATTACAGGAATGCCCGACAAGTGGTATTTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAGCGTAAAGCAAAGAGCTCAGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCTGTGGCCAAACTTTTCTGGCATGATAGGAAGGTTGATAAAGCTAGAAGTTGGTTGAATAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTTGAACTGCAACATGGAAATGCTGATACACAAAAGGATGTCCTACAAAGATGTGTTGCAGCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAACAAAGGCTGTTGAGAACTCACATCTGTCAATTGAGGCCCTTCTGAAGAAAGCTGTGTTGGCTCTTGGCCAGGAAGAAAATCCAAATGCTGCAGATCCCTAGTTTGTCTCACTTTTAACTTTTGATAAGTCTGGTCACAGGTCTAATTCTTCTGCGCATGCTGGCAATGGAATATATAGAGAAAGAAACACAGTTGGGTAGTGAACTGGGATGGACTCGAGCTGCGACCTCGTGATTCTGTGTACCACCGAACTGATTGCTGCACTCCTCCAACCATGAAGCCTTACCTGAAGAAGAATCAGGCATGCGATTACTACAATTTGTATCGGCGATCACCAGTTAAAACCTGTATCGTTTGTATGCCCTAATTGCCAGCAATACTTCTGTACTACCATGAGCATGTTTATTCCTCCAGATGCATACCACAAATTCTTAGATGGGTGTATTTGCTAGCCGCGACTTGGGATGATGTAATTTTTCTTGGGTTCGGTTTATTCTCAGAGCACTGGCGTCTGTATCTACGACTGTAAGATCTGCCTGAATGTCGGCTTAATATATGAGATAATGCCCC ] [+] EMBL BQ909141 [ AGATCCCTAGTTTGTCTCACTTTTAACTTTTGATAAGTCTGGTCACAGGTCTAATTCTTCTGCGCATGCTGGCAATGGAATATATTGAGAAAGAAACACAGTTGGGTAGTGAACTGGGATGGACTCGAGCTGCGACCTCGTGATTCTGTGTACCACCGAACTGATTGCTGCACTCCTCCAACCATGAAGCCTTACCTGAAGAAGAATCAGGCATGCGATTACTACAATTTGTATCGGCGATCACCAGTTAAAACCTGTATCGTTTGGATGCCCTAATTGCCAGCAATACTTCTGTACTACCATGAGCATGTTTATTCCTCCAGATGCATACCACAAATTCTTAGATCGGTGTATTTGCTAGCCGCGACTTGGGATGATGTAATTTTTCTTGGGTTCGGTTTATTCTCAGAGCACTGGCGTCTGTATCTACGACTGTAAGATCTGCCTGAATGTCGGCTTAATATATGAGATAATGCCCCATTTTTCTAGCAAAAAAAAA] consensusID : consensus_11789#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2088 fasta sequence [CTGAGCATGCTGGATCTGTGATGACTTGCCAGGCTATTGTGAAGAACACTATTGGCGTTGGTGTTGATGATGAAGACAGAAAACGCACATGGGTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTATGCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTTGAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATACAATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATTGTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGTCATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAACTAATCTAGAGGAGAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCATTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAGCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCTTCTTCTCAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGACCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTCCGAAGGACCTTCAGCTTCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGAGGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGCCTACAATTTATTTAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGGAAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCAGTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTCATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAGTTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTGATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGA] [+] EMBL AK064411 [CTGAGCATGCTGGATCTGTGATGACTTGCCAGGCTATTGTGAAGAACACTATTGGCGTTGGTGTTGATGATGAAGACAGAAAACGCACATGGGTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTATGCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTTGAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATACAATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGATGTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAGATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATTCTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATTGTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAGTTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGTCATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAACTAATCTAGAGGAGAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCAGTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCATTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGTCCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTCATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGGTTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAATTCGAACTACAACATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGCATCAGAGCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCTTCTTCTCAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGACCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTCCGAAGGACCTTCAGCTTCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGAGGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGCCTACAATTTATTTAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGGAAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCAGTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTCATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAGTTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTGATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGA] consensusID : consensus_11789#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 694 fasta sequence [CGAACTTCCACCATGNAACCGCTGATNCNCATAAGGATGTTGACAACGATGTGTTGCATCAGACCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTT-CTGCTACGACCT-CGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGA-CCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGGTATAGTGTTATACAGATATCATGCCATCAAATGAATGTTTCTTTCGGCAAAGCTCTTCTCCATTTCATGTGACTAAATTATACAATTCTGAAGAAACTTCATTTCACCTAGAATTTTCATGTATTCCATTTCATACTAAAAAAA] [+] EMBL AU081577 [CGAACTTCCACCATGNAACCGCTGATNCNCATAAGGATGTTGACAACGATGTGTTGCATCAGACCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACACCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCCAAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTAAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTGAACTGGGATGCACTCAAGCAACTGCTT CTGCTACGACCT CGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCAACCGTGAAGCTTACCTGAAGAAGCACCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGA CCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGGTATAGTGTTATACAGATATCATGCCATCAAATGAATGTTTCTTTCGGCAAAGCTCTTCTCCATTTCATGTGACTAAATTATACAATTCTGAAGAAACTTCATTTCACCTAGAATTTTCATGTATTCCATTTCATACTAAAAAAA] [+] EMBL AU031722 [ gnCAGTGAACTGGGATGCANTCAAGCAACTGCTTCCTGCTACGACCTNCGCATTCTCTACCCACCGAACTGATTGCTGCAGTCCCCCNACCGTGAAGCTTACCTGAAGAAGCNCCAGGCATGCCATTGCTCCAATGTGATTGGCTATCTCTAGTTAATGACCCAGGAGCATGAAGCATTACAAGATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCACTGCTGCCTTCCTTGGCGTCGGNAGAAGAGCTTTGTTCTACATGTAAGNTATAGTGTTATACAGATATCATGCNATCAAATGAATGTTTCTTTCGGNAAAGNTCTTCTNNATTTCATGTGACTAAATTATACAATTCTGAAGAANCTTCATTTCACCTAGAATTTTCATGTATTCNATTTNATANTAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 CAGCCTGCGCCGCGCGCTACGACTTCCTCAACTCCAAGCCGCCCCCCAACTACGTGGCGA 60 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GACTGGGACGCGGCGCCGCCGGGTTCACCACCCGCTCGGATATCGGGCCCGCCATGGGGC 120 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GCGGCCGTGGGAAGCCGCCTGGGGACGACGGCGACGGCGATGGCGGTGGCGACGAGGAGG 180 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 AGAAGGGGTACGACGAGAACCAGAAGTTCGACGAGTTCGAGGGCAACGACGCCGGCCTCT 240 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 TCTCCAACGCCGGCCACGACGACGACGACGACGACCGCGAGGCGGACGCGGTCTGGGAGG 300 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GCATCGACCGGAGGATGGACTCGCGCCGCAAGGACTGGCGAGAGGCGCGGCTGAAGCAGG 360 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 AGATCGAGAGGTACCGCGCGTCCAACCCTAAAATCACCGAGCAATTCGCCGATCTGAAGC 420 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GGAAATTGGTCGATTTGTCAGCGCAGGAGTGGGAGAGCATACCGGAGATTGGGGATTATT 480 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 CGCTTCGTCGCAACAAGAAGAGGCGATTTGAGAGCTTTGTCCCGGTGCCTGACACCCTGC 540 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 TCGAGAAGGCCCGGCAGGAGCAGGGGCATGTCACCGCATTGGACCCCAAGAGCCGTGCAG 600 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 CCGCCGCTGGCGCAGAGACGCCATGGGCGCAGACTCCGGTTACTGATCTGACAGCCGTCG 660 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GCGAAGGCCGTGGCACCGTGCTTTCTTTGAAGCTGGACAGGTTATCCGATTCGGTATCCG 720 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GTGTTACTATTGTTGATCCAAGGGGTTACCTGACTAACCTGAAGAGTATGAAGATTACTA 780 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GTGATGCTGAAATTTCTGACATAAAGAAGGCCAGGTTGTTGCTCAAGTCAGTGATACAGA 840 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 CGAACCCAAAGCATCCACCAGGATGGATTGCTGCTGCTAGGCTTGAAGAGGTTGCCGGCA 900 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 AGCTTCAGGTTGCTCAGCAGCTCATCCAGCGTGGCTGCGAGGAGTGCCCCACGAATGAGG 960 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 ATGTTTGGCTCAAGGCATGCCGGTTGGCCAGCCCAGATGAGGCAAAGGCCGTGATTGCCA 1020 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GGGGTGTGAAGGAAATTCCCAATTCTGTGAAGCTGTGGTTGCAGGCAGCGAAGTTGGAAA 1080 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 CTAGTGACTTGAATAAGAGCAGGGTTTTGAGAAAAGGGTTGGAACACATTCCTGATTCAG 1140 consensus_11789#1 ---------------------------------AAAGGTTGGAACACATTCCTGATTCAG 27 consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 TCAGGCTGTGGAAATCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGGCTGTTGCTTC 1200 consensus_11789#1 TCAGACTGTGGAAAGCAGTAGTAGAGCTTGCAAATGAGGAGGATGCAAGACTGTTGCTTC 87 consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 ACAGGGCTGTGGAGTGCTGCCCATTCCATTTGGAACTGTGGCTTGCACTAGCGAGGCTGG 1260 consensus_11789#1 ACAGGGCTGTGGAGTGCTGCCCACTCCATGTGGAACTGTGGCTTGCCCTAGCAAGGCTGG 147 consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 AGACGTATGACCAAGCAAAGAAGGTACTTAACAAGGCAAAAGAAAAGCTCCCTAAGGAGC 1320 consensus_11789#1 AGACATATGACCAAGCAAAGAAGGTACTTAACAAGGCAAGAGAAAAGCTTCCTAAGGAAC 207 consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 CTGCCATCTGGATTATGGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCGAGTCAGTAA 1380 consensus_11789#1 CTGCCATCTGGATTACAGCTGCAAAGCTGGAGGAAGCTAATGGAAACACCCAGTCAGTAA 267 consensus_11789#2 ------------------------------------------------------------ consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 ACGAGGTGATTGAGAGAAGTATAAAAACTTTACAGGGAAAAGGATTGGGTATTGACAGGG 1440 consensus_11789#1 TCAAGGTGATTGAGAGAAGTATAAAAACTTTACAGAGAGAAGGATTGGATATTGACAGGG 327 consensus_11789#2 ---------------------------CTGAGCATGCTGGATCTGTGATGACTTGCCAGG 33 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 AGGCATGGCTAAAGGAAGCAGAAGCTGCTGAGCATGCTGGATCTGTGATGACTTGCCAGG 1500 consensus_11789#1 AGGCATGGCTAAAGGAAGCANAAGCTGCTGAGCGTGCTGGATCTGTATTGACTTGCCAGG 387 consensus_11789#2 CTATTGTGAAGAACACTATTGG-CGTTGGTGTTGATGATGAAGACAGAAAACGCACATGG 92 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 CTATTGTGAAGAACACTATTGG-CGTTGGTGTTGATGATGAAGACAGAAAACGCACATGG 1559 consensus_11789#1 CTATTGTTAAGAGCACTATTGNGCATTGGTGTTGATGAGGAAGACAGAAAACGCACATGG 447 consensus_11789#2 GTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTAT 152 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GTTGCTGATGCTGAGGAATGCAAGAAGCGTGGTTCAGTTGAGACAGCCCCTGCCATCTAT 1619 consensus_11789#1 GTTGCCGATGCTGAGGAATGCAAGAAGCGTGGTTCAATTGAGACAGCCCGTGCCATCTAT 507 consensus_11789#2 GCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTT 212 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GCACATGTGCTCAGTGTCTTCAAATTCAAGAAGAGTATTTGGTTGAAAGCGGCTCAGCTT 1679 consensus_11789#1 GCGCATGCACTCAGTGTCTTCGTTTCCAAGAAGAGTATTTGGCTGAAAGCGGCTCAGCTT 567 consensus_11789#2 GAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATAC 272 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GAGAAGAGACATGGGACTGAGGAGTCTCTTTATATTCTCCTCAGTAAGGCTACAACATAC 1739 consensus_11789#1 GAGAAGAGCCATGGAACCAAGGAGTCTCTTTATAATCTCCTCAGAAAGGCTGTTACCTAC 627 consensus_11789#2 AATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGAT 332 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 AATCGACATGCAGAAGTGCTATGGCTTATGTATGCAAAGGAGAAATGGCTGGCTGGAGAT 1799 consensus_11789#1 AATCCACGTGCAGAAGTTTTATGGCTTATGAGTGCAAAGGAGAAATGGCTGGCTGGAGAT 687 consensus_11789#2 GTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAG 392 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GTCCCTGCTGCCCAAACCATTCTTCAGGAAGCTTACGCTTATCTTCCCAATTCAGAGGAG 1859 consensus_11789#1 GTCCCGGCTGCCCGAGCCATTCTTCAGGAAGCTTATGCTTCTCTCCCCAATTCAGAGGAG 747 consensus_11789#2 ATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATT 452 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 ATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAACAATGAACCAGAGAGAGCAAGAATT 1919 consensus_11789#1 ATCTGGCTAGCTGCCTTCAAGCTTGAGTTTGAGAGCAATGAACCAGAGAGAGCAAGAATT 807 consensus_11789#2 CTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATT 512 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 CTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCCATT 1979 consensus_11789#1 CTTTTGTCAAAGGCCAGGGAAAGAGGAGGCACTGAGAGGGTCTGGATGAAATCTGCGATT 867 consensus_11789#2 GTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAG 572 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GTTGAAAGGGAGTTAGGGAATGTAGACGAGGAAAGAAAGCTGTTGGAGGAAGGTCTGAAG 2039 consensus_11789#1 GTTGAAAGGGAGTTAGGGAATGTAGACGAAGAAAGGAAGCTGTTGGAGGAAGGTCTGAAG 927 consensus_11789#2 TTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGT 632 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 TTATTCCCCTCATTCTTCAAATTGTGGTTAATGCTTGGGCAAATGGAAGACCGGCTTGGT 2099 consensus_11789#1 TTATTCCCCTCATTCTTCAAGCTGTGGTTAATGCTTGGACAAATGGAAGACCGGCTTGGC 987 consensus_11789#2 CATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAA------- 685 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 CATGTAGCCAAGGCAAAGGAGGCTAATGAGAACGCACTGAAACACTGCCCGAA------- 2152 consensus_11789#1 CATGGATCCAAGGCAAAGGAGGTTTACGAGAATGCACTGAAGCACTGCCCGAGTTGCATC 1047 consensus_11789#2 -------------------CTAATCTAGAGGAGAAGA----------------------- 703 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 -------------------CTAATCTAGAGGAGAAGATAAATGGCTTGAGGAAGTCACGT 2193 consensus_11789#1 CCTCTTTGGCTCTCTCTAGCTAATCTAGAGGAGAAGATAAATGGCTTGAGCAAGTCACGT 1107 consensus_11789#2 ---------------------AAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCA 742 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GCTGTTCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCA 2253 consensus_11789#1 GCTGTCCTCACCATGGCAAGAAAGAAGAACCCAGCTACACCTGAACTCTGGCTTGCAGCA 1167 consensus_11789#2 GTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCA 802 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GTTCGAGCTGAATTGAGGCATAGGAACAAGAAGGAAGCTGATGCTTTACTAGCCAAGGCA 2313 consensus_11789#1 GTTAGGGCTGAATTGAGACATGGGAACAAGAAGGAAGCTGATGCTCTACTAGCCAAGGCA 1227 consensus_11789#2 TTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGT 862 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 TTGCAGGAGTGCCCAACAAGTGGTATCTTGTGGGCTGCAGCTATAGAGATGGTGCCACGT 2373 consensus_11789#1 TTACAGGAATGCCCGACAAGTGGTATTTTGTGGGCTGCAGCTATAGAGATGGTGCCACGT 1287 consensus_11789#2 CCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTC 922 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 CCCCAACGTAAAGCAAAGAGCTCGGATGCTATAAAACGATGTGACCATGATCCCCATGTC 2433 consensus_11789#1 CCCCAGCGTAAAGCAAAGAGCTCAGATGCTATAAAACGATGTGACCATGATCCCCATGTC 1347 consensus_11789#2 ATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGG 982 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 ATTGCAGCCGTGGCTAAACTTTTCTGGCATGATAGGAAGTTTGATAAAGCTAGGAGTTGG 2493 consensus_11789#1 ATTGCAGCTGTGGCCAAACTTTTCTGGCATGATAGGAAGGTTGATAAAGCTAGAAGTTGG 1407 consensus_11789#2 TTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAA 1042 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 TTGAACAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAA 2553 consensus_11789#1 TTGAATAGAGCTGTTACTCTTGCTCCAGACATTGGAGATTTTTGGGCCTTGTACTACAAA 1467 consensus_11789#2 TTCGAACTACAAC-ATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGC 1101 consensus_11789#3 --CGAACTTCCACCATGNAACCGCTGATNCNCATAAGGATGTTG-ACAACGATGTGTTGC 57 consensus_11789#0 TTCGAACTACAAC-ATGGAAACGCTGATACACATAAGGATGTTGTACAACGATGTGTTGC 2612 consensus_11789#1 TTTGAACTGCAAC-ATGGAAATGCTGATACACAAAAGGATGTCCTACAAAGATGTGTTGC 1526 ***** * ** *** ** ****** * ** ******** **** ********** consensus_11789#2 ATCAGAGCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACA 1161 consensus_11789#3 ATCAGACCCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACA 117 consensus_11789#0 ATCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAGCGAAGGCTGTTGAGAACTCACA 2672 consensus_11789#1 AGCAGAACCAAAGCATGGAGAGAGATGGCAAGCAATAACAAAGGCTGTTGAGAACTCACA 1586 * **** ****************************** * ******************** consensus_11789#2 CCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCC 1221 consensus_11789#3 CCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCC 177 consensus_11789#0 CCTGTCGATTGAGGCCCTTCTGAAGAAAGCTGTGGTGGCTCTTGGCCAGGATGAAAATCC 2732 consensus_11789#1 TCTGTCAATTGAGGCCCTTCTGAAGAAAGCTGTGTTGGCTCTTGGCCAGGAAGAAAATCC 1646 ***** *************************** **************** ******** consensus_11789#2 AAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTA----------AGGTC 1271 consensus_11789#3 AAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTA----------AGGTC 227 consensus_11789#0 AAATGCTGTAGATCCCTAGTCTGTATCACTTTTAACTTTAAATTA----------AGGTC 2782 consensus_11789#1 AAATGCTGCAGATCCCTAGTTTGTCTCACTTTTAACTTTTGATAAGTCTGGTCACAGGTC 1706 ******** *********** *** ************** ** * ***** consensus_11789#2 TTCTTCT------CAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTG 1325 consensus_11789#3 -------------------GATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTG 268 consensus_11789#0 TTCTTCTG-----CAGGTCGATAAAGAAATATGTAGAGAAAGAAATACAACTAGACAGTG 2837 consensus_11789#1 TAATTCTTCTGCGCATGCTGGCAATGGAATATATAGAGAAAGAAACACAGTTGGGTAGTG 1766 * ** * ***** ************ *** * * **** consensus_11789#2 AACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGC-ATTCTCTAC-CCACCGA 1383 consensus_11789#3 AACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGC-ATTCTCTAC-CCACCGA 326 consensus_11789#0 AACTGGGATGCACTCAAGCAACTGCTTCTGCTACGACCTCGC-ATTCTCTAC-CCACCGA 2895 consensus_11789#1 AACTGGGATGGACTCGA------------GCTGCGACCTCGTGATTCTGTGTACCACCGA 1814 ********** **** * *** ******** ***** * ******* consensus_11789#2 ACTGATTGCTGCAGTCCCCCAACCGTGAAGC-TTACCTGAAGAAGCACCAGGCATGCCAT 1442 consensus_11789#3 ACTGATTGCTGCAGTCCCCCAACCGTGAAGC-TTACCTGAAGAAGCACCAGGCATGCCAT 385 consensus_11789#0 ACTGATTGCTGCAGTCCCCCAACCGTGAAGC-TTACCTGAAGAAGCACCAGGCATGCCAT 2954 consensus_11789#1 ACTGATTGCTGCACTCCTCCAACCATGAAGCCTTACCTGAAGAAGAATCAGGCATGCGAT 1874 ************* *** ****** ****** ************* * ********* ** consensus_11789#2 TGCTCCAATGTG-ATTGGCTATCTCTAGTTAATG-------------------------- 1475 consensus_11789#3 TGCTCCAATGTG-ATTGGCTATCTCTAGTTAATG-------------------------- 418 consensus_11789#0 TGCTCCAATGTG-ATTGGCTATCTCTAGTTAATGGTTAGCAATATTCTTGAACTACCATG 3013 consensus_11789#1 TACTACAATTTGTATCGGCGATCACCAGTTAAAA-------------------------- 1908 * ** **** ** ** *** *** * ****** consensus_11789#2 ------------------------------------ACCAGGAGCATGAAGCATTACAAG 1499 consensus_11789#3 ------------------------------------ACCAGGAGCATGAAGCATTACAAG 442 consensus_11789#0 ACCATGTAGACAATATTCTTGAACTACCAGCACCAGACCAGGAGCATGAAGCATTACAAG 3073 consensus_11789#1 -------------------------------------CCTGTATCGT------TTGTATG 1925 ** * * * * ** * * consensus_11789#2 ATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCAC 1559 consensus_11789#3 ATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCAC 502 consensus_11789#0 ATCAACTTTCAGGGAAGGATCATTTTCAAACAGTTTTGTGTATAAATGGGACAGTCCCAC 3133 consensus_11789#1 CCCTAATTGCCAGCAA----TACTTCTGTACTACCATGAGCAT-----GTTTATTCCTCC 1976 * * ** * * ** * ** ** ** * ** * * *** * consensus_11789#2 TGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTCCGA 1619 consensus_11789#3 TGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGGTATAGTGTTATA 562 consensus_11789#0 TGCTGCCTTCCTTGGCGTCGGCAGAAGAGCTTTGTTCTACATGTAAGAGCCTACGTTCGA 3193 consensus_11789#1 AGATGCATACCACAAATTCT-TAGATGGG------TGTATTTGCTAGCCGCGAC-TTGGG 2028 * *** * ** ** *** * * * ** ** ** * consensus_11789#2 AGGACCTTCAGCT-TCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGA 1678 consensus_11789#3 CAGATATCATGCCATCAAATGAATGTTTCTTTCGGCAAAGCTCTT-CTCCATTTCATGTG 621 consensus_11789#0 AGGACCTTCAGCT-TCATGTTATTACCTCCAATATGATGATTGACGCTTTGCTCAAAGGA 3252 consensus_11789#1 ATGATGTAATTTT-TCTTGGGTTCGGTTTATTC-TCAGAGCACTGGCGTCTGTATCTACG 2086 ** * ** * * * * consensus_11789#2 GGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGCCTACAATTTATT 1738 consensus_11789#3 ACTAAATTATACAATTCTGAAGAAAC-TTCATTTCACCTAGAATTTTCATGTATTCCATT 680 consensus_11789#0 GGCAGATAGGAATATGCCATGGATATGTTTAGTCCAGAATAATGTGGTCTACAATTTATT 3312 consensus_11789#1 ACTGTA------AGATCTGCCTGAATGTCGGCTTAATATATGAGATA---ATGCCCCATT 2137 * * * * * * *** consensus_11789#2 TAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGG 1798 consensus_11789#3 TCAT-ACTAAAAAAA--------------------------------------------- 694 consensus_11789#0 TAATGATTATTTTCATTGGAGCTTCTACTGCTTCCCAGCTACCTCTTTTTCTCAAAGAGG 3372 consensus_11789#1 TTTCTAGCAAAAAAAAA------------------------------------------- 2154 * * * * consensus_11789#2 AAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCA 1858 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 AAATATATGCAGCATGTGCAGTCCCTCCCTGAGAAATACCGTTTTCAAGTATCACATGCA 3432 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 GTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTC 1918 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 GTATTTGATAATCGAAATTCTGGTCTGACAATAAGACCAAATTGCTACTTCCTCCGTTTC 3492 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAG 1978 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 ATATTATAAGACTTTCTAGTATTGCCCACATTTCTTTGTAGGACTCATCTGAATCCTTAG 3552 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 TTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTG 2038 consensus_11789#3 ------------------------------------------------------------ consensus_11789#0 TTTTTATAATCGAAGTATTGTTTAAAGTCAAAGATGTCAGAACATGGATGTATAAACCTG 3612 consensus_11789#1 ------------------------------------------------------------ consensus_11789#2 ATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGA------- 2088 consensus_11789#3 --------------------------------------------------------- consensus_11789#0 ATATTTAGATCAGTTATGTAATGTGATCATATTCTTGGGAGATAACAAGATCAGTTT 3669 consensus_11789#1 --------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||