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Oryza sativa
cluster # 11791 cluster # 11791       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11791#0 length = 1726 sequences # 7  
consensus_11791#1 length = 563 sequences # 2  

consensusID : consensus_11791#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1726
fasta sequence
                              [CGCGCGCATCATCCAAATCCCACTACCGCTCCCTTCCAAAAACCAAACTCCGCAGTCTCTACCAAACCCACGCCGGCGCCGCATCGTCTTCGTCTCGTCTCCTCCAGTCAAGTGCTAGCTAGGGCCTAGGCTGCCGCTCCCGCTCTCTCGCCTTCTTCACCCCCGAGCCTGATCGATGGGGAAGCAGGAGCAGGAGAAGATGCTCCTCCAGGCCGCCTACGATGACAACCTCCGCCTCCTCAGGAAGATGGCGCGAGGGCTGGACACCGGGCAGGGCGAGGCTGCCGTCGTGGCGGCGGTGGCGGGCAGGGCCGACGGGAACCGCGCTCTCCACCTGGCGGCCGCCCGAGGAAGCATGGATGTCCTCAGGTACCTCGTGGAGGACCTCCACCTCAGCGTCAACCAGTTCAATGCCAAAGGTGAAACACCACTGTGCCTTTCTTCAATTCATGGGAGAGCTGCTGCTACAAGATATCTTCTCGATCACGGTTCTGATCCTACGATTGATAAATCAGTGTTACCTTTTCATGCTGCTGCAACGAAAGGACACTGCGAAATAGTAGAGTTGTTTCTTTCAAGAGGAGTTGATGTGGATTTAGATTCTATCACTGGGACCCCATTGCTGACAGCTGCGATGAATGGCCAATATAGCACGATGAAGATTTTATTGGAGCATCACGCTGATCCTAACAGGGTTGTCAATCATAATGGTACCCCATTGATTATGTCCATAGTTTCTGGATCATTGGAATGCGTGAAGCTATTAATCAAAGTTGGTGCTGATGTGAATTTTAGAGATCCCAATGGTGTTACTTGTGTGATGGTCGCAGCAAATCATGGCTCTCCTGTCATCATGAAGTGCTTACTAGATGCTGGTGCTAATTCAAATATTCCAGATGAATTTAATAGGACTCCAATTGAAGTTGCCGCTAATCGAGGCAGAAGGGACATTGTTAAAATGTTGTTTCCTTTAACTTCACCAATTTCAACACTGCCTGATTGGAGTATCGATGGAGTTATTTCTCATGTGCAAACTTTTGGTTTGAAGCCAAGGGATAATGATCTGTCTAAAAGGAAAAGTGCTGAACTGAAATTACAAGCTAGAGAGGCTTTCGAGAGAGAGGAATATATGCTTGCAGGACAACACTACACTAATGCAATAGAACTTACCACTAATGCTCATGATAAGGCAACCCTGCTAGCAAACAGGAGCCTGTGCTGGTTGCGTTTGTCAACCGGCAATGGGGCTCTTGCTGATGCTAACATGTGCAGAATGTTGCGGCCCAGTTGGCCCAAAGCATGCTATCGACAAGGGGCAGCTTTCATGTTTCTAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAAGTTGGACCCTGCAAATGAAGATATAGCGAAAGCTTTAAGGGATGCCCAGGAGGCCATGAAGGACCAAATGGAGCACAGAGGTTGATTCAGCCTTACCTTGCGCCTCTATTTTGTTGCTAGCTACTCCCTCCGTTCTATAAAAAGTATAAATCTAAGACATGCGACATATTCTAATACTATGAATTTAATATAAATTAGGATATGTCACATCTGTTACGGTTTGTATTTTATGGTAAAGA-GGGAGTAAGTCCCAAAGACATTTTGGCTGCCAACGGACAAGCTTTTGCGTTTTGTTAACCTGAGACCTGAGAGTTTAGTGTTAAATGTGAACTATGTGGGAACTATTTCA]

[+] EMBL AK100990             [CGCGCGCATCATCCAAATCCCACTACCGCTCCCTTCCAAAAACCAAACTCCGCAGTCTCTACCAAACCCACGCCGGCGCCGCATCGTCTTCGTCTCGTCTCCTCCAGTCAAGTGCTAGCTAGGGCCTAGGCTGCCGCTCCCGCTCTCTCGCCTTCTTCACCCCCGAGCCTGATCGATGGGGAAGCAGGAGCAGGAGAAGATGCTCCTCCAGGCCGCCTACGATGACAACCTCCGCCTCCTCAGGAAGATGGCGCGAGGGCTGGACACCGGGCAGGGCGAGGCTGCCGTCGTGGCGGCGGTGGCGGGCAGGGCCGACGGGAACCGCGCTCTCCACCTGGCGGCCGCCCGAGGAAGCATGGATGTCCTCAGGTACCTCGTGGAGGACCTCCACCTCAGCGTCAACCAGTTCAATGCCAAAGGTGAAACACCACTGTGCCTTTCTTCAATTCATGGGAGAGCTGCTGCTACAAGATATCTTCTCGATCACGGTTCTGATCCTACGATTGATAAATCAGTGTTACCTTTTCATGCTGCTGCAACGAAAGGACACTGCGAAATAGTAGAGTTGTTTCTTTCAAGAGGAGTTGATGTGGATTTAGATTCTATCACTGGGACCCCATTGCTGACAGCTGCGATGAATGGCCAATATAGCACGATGAAGATTTTATTGGAGCATCACGCTGATCCTAACAGGGTTGTCAATCATAATGGTACCCCATTGATTATGTCCATAGTTTCTGGATCATTGGAATGCGTGAAGCTATTAATCAAAGTTGGTGCTGATGTGAATTTTAGAGATCCCAATGGTGTTACTTGTGTGATGGTCGCAGCAAATCATGGCTCTCCTGTCATCATGAAGTGCTTACTAGATGCTGGTGCTAATTCAAATATTCCAGATGAATTTAATAGGACTCCAATTGAAGTTGCCGCTAATCGAGGCAGAAGGGACATTGTTAAAATGTTGTTTCCTTTAACTTCACCAATTTCAACACTGCCTGATTGGAGTATCGATGGAGTTATTTCTCATGTGCAAACTTTTGGTTTGAAGCCAAGGGATAATGATCTGTCTAAAAGGAAAAGTGCTGAACTGAAATTACAAGCTAGAGAGGCTTTCGAGAGAGAGGAATATATGCTTGCAGGACAACACTACACTAATGCAATAGAACTTACCACTAATGCTCATGATAAGGCAACCCTGCTAGCAAACAGGAGCCTGTGCTGGTTGCGTTTGTCAACCGGCAATGGGGCTCTTGCTGATGCTAACATGTGCAGAATGTTGCGGCCCAGTTGGCCCAAAGCATGCTATCGACAAGGGGCAGCTTTCATGTTTCTAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAAGTTGGACCCTGCAAATGAAGATATAGCGAAAGCTTTAAGGGATGCCCAGGAGGCCATGAAGGACCAAATGGAGCACAGAGGTTGATTCAGCCTTACCTTGCGCCTCTATTTTGTTGCTAGCTACTCCCTCCGTTCTATAAAAAGTATAAATCTAAGACATGCGACATATTCTAATGCTATGAATTTAATATAAATTAGGATATGTCACATCTGTTACGGTTTGTATTTTATGGTAAAGA GGGAGTAAGTCCCAAAGACATTTTGGCTGCCAACGGACAAGCTTTTGCGTTTTGTTAACCTGAGACCTGAGAGTTTAGTGTTAAATGTGAACTATGTGGGAACTATTTCA]
[+] EMBL CB666423             [                                                                                                                                                                      GCCTGATCGATGGGGAAGCAGGAGCAGGAGAAGATGCTCCTCCAGGCCGCCTACGATGACAACCTCCGCCTCCTCAGGAAGATGGCGCGAGGGCTGGACACCGGGCAGGGCGAGGCTGCCGTCGTGGCGGCGGTGGCGGGCAGGGCCGACGGGAACCGCGCTCTCCACCTGGCGGCCGCCCGAGGAAGCATGGATGTCCTCAGGTACCTCGTGGAGGACCTCCACCTCAGCGTCAACCAGTTCAATGCCAAAGGTGAAACACCACTGTGCCTTTCTTCAATTCATGGGAGAGCTGCTGCTACAAGATATCTTCTCGATCACGGTTCTGATCCTACGATTGATAAATCAGTGTTACCTTTTCATGCTGCTGCAACGAAAGGACACTGCGAAATAGTAGAGTTGTTTCTTTCAAGAGGAGTTGATGTGGATTTAGATTCTATCACTGGGACCCCATTGCTGACAGCTGCGATGAATGGCCAATATAGCACGATGAAGATTTTATTGGAGCATCACGCTGATCCTAACAGGGTTGTCAATCATAATGGTACCCCATTGATTATGTCCATAGTTTCTGGATCATTGGAATGCGTGAAGCTATTAATCAAAGTTGGTGCTGATGTGAATTTTAGAGATCCCAATGGTGTTACTTGTGTGATGGTCGCAGCAAATCATGGCTCTCCTGTCATCATGAAGTGCTTACTAGATGCTGGTGCTAATTCAAATATTCCAGATGAATTTAATAGGACTCCAATTGAAGTTGCCGCTAATCGAGGCAGAAGGGACATTGTTAAAATGTTGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB664275             [                                                                                                                                                                                            AGCAGGAGAAGATGCTCCTCCAGGCCGCCTACAATGACAACCTCCGCCTCCTCATGAAGATGGCGCGAGGGCTGGACACCGGGCAGGGCGAGGCTGCCGTCGTGGCGGCGGTGGCGGGCAGGGCCGACGGGAACCGCGCTCTCCACCTGGCGGCCGCCCGAGGAAGCATGGATGTCCTCAGGTACCTCGTGGAGGACCTCCGCCTCAGCGTCAACCAGTTCAATGCCAAAGGTGAAACACCACTGTGCCTTTCTTCAATTCATGGGAGAGCTGCTGCTACAAGATATCTTCTCGATCACGGTTCTGATCCTACGATTGATAAATCAGTGTTACCTTTTCATGCTGCTGCAACGAAAGGACACTGCGAAATAGTAGAGTTGTTTCTTTCAAGAGGAGTTGATGTGGATTTAGATTCTATCACTGGGACCCCATTGCTGACAGCTGCGATGAATGGCCAGTATAGCACGATGAAGATTTTATTGGAGCATCACGCTGATCCTAACAGGGTTGTCAATCATAATGGTACCCCATTGATTATGTCCATAGTCTCTGGATCATTGGAATGCGTGAAGCTATTAATCAAAGCTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB661885             [                                                                                                                                                                                                                                                                                                                                      CTCTCCACCTGGCGGCCGCCCGAGGAAGCATGGATGTCCTCAGGTACCTCGTGGAGGACCTCCACCTCAGCGTCAACCAGTTCAATGCCAAAGGTGAAACACCACTGTGCCTTTCTTCAATTCATGGGAGAGCTGCTGCTACAAGATATCTTCTCGATCACGGTTCTGATCCTACGATTGATAAATCAGTGTTACCTTTTCATGCTGCTGCAACGAAAGGACACTGCGAAATAGTAGAGTTGTTTCTTTCAAGAGGAGTTGATGTGGATTTAGATTCTATCACTGGGACCCCATTGCTGACAGCTGCGATGAATGGCCAATATAGCACGATGAAGATTTTATTGGAGCATCACGCTGATCCTAACAGGGTTGTCAATCATAATGGTACCCCATTGATTATGTCCATAGTTTCTGGATCATTGGAATGCGTGAAGCTATTAATCAAAGTTGGTGCTGATGTGAATTTTAGAGATCCCAATGGTGTTACTTGTGTGATGGTCGCAGCAAATCATGGCTCTCCTGTCATCATGAAGTGCTTACTAGATGCTGGTGCTAATTCAAATATTCCAGATGAATTTAATAGGACTCCAATTGAAGTTGCCGCTAATCGAGGCAGAAGGGACATTGTTAAAATGTTGTTTCCTTTAACTTCACCAATTTCAACACTGCCTGATTGGAGTATCGATGGAGTTATTTCTCATGTGCAAACTTTTGGTTTGAAGCCAAGGGATAATGATCTGTCTAAAAGGAAAAGTGCTGAACTGAAATTACAAGCTAGAGAGGCTTTCGAGAGAGAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB661886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TTTCTGGATCATTGGAATGCGTGAAGCTATTAATCAAAGTTGGTGCTGATGTGAA TTTAGAGATCCCAATGGTGTTACTTGTGTGATGGTCGCAGCAAATCATGGCTCTCCTGTCATCATGAAGTGCTTACTAGATGCTGGTGCTAATTCAAATATTCCAGATGAATTTAATAGGACTCCAATTGAAGTTGCCGCTAATCGAGGCAGAAGGGACATTGTTAAAATGTTGTTTCCTTTAACTTCACCAATTTCAACACTGCCTGATTGGAGTATCGATGGAGTTATTTCTCATGTGCAAACTTTTGGTTTGAAGCCAAGGGATAATGATCTGTCTAAAAGGAAAAGTGCTGAACTGAAATTACAAGCTAGAGAGGCTTTCGAGAGAGAGGAATATATGCTTGCAGGACAACACTCCACTAATGCAATAGAACTTACCACTAATGCTCATGATAAGGCAACCCTGCTAGCAAACAGGAGCCTGTGCTGGTTGCGTTTGTCAACCGGCAATGGGGCTCTTGCTGATGCTACCATGTGCAGAATGTTGCGGCCCAGTTGGCCCAAAGCATGCTATCGACAAGGGGCAGCTTTCATGTTTCTAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAAGTTGGCCCCTGCAAATGAAGATATAGCGAAAGCTTTAAGGGATGCCCAGGAGGCCATGAAGGACCAAATGGAGCACAGAGGTTGATTCACCCTTCCCTTGCGCCTCTATTTTGTTGCTAGCTACTCCCTCCGTTCTATAAAAAGTATAAATCTAAGACATGCGACATATTCTAATACTATGAATTTAATATAAATTAGGATATGTCACATCTGTTCCGGTTTGTATTTTATGGTAAAGAGGGGAGTAAGTCCCAAAGCCATTTTGGCTGCCAAaaaaaga                                                                      ]
[-] EMBL CB664276             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCCGCTAATCGAGGCAGAAGGGACATTGTTAAAATGTTGTTTCCTTTAACTTCACCAATTTCAACACTGCNTGATTGGAGTATCGATGGAGTTATTTCTCATGTGCAAACTTTTGGTTTGAAGCCAAGGGATAATGATCTGTCTAAAAGGAAAAGTGCTGAACTGAAATTACAAGCTAGAGAGGCTTTCGAGAGAGAGGAATATATGCTTGCAGGACAACACTACACTAATGCAATAGAACTTACCACTAATGCTCATGATAAGGCAACCCTGCTAGCAAACAGGAGCCTGTGCTGGTTGCGTTTGTCAACCGGCAATGGGGCTCTTGCTGATGCTAACATGTGCAGAATGTTGCGGCCCAGTTGGCCCAAAGCATGCTATCGACAAGGGGCAGCTTTCATGTTTCTAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAAGTTGGACCCTGCAAATGAAGATATAGCGAAAGCTTTAAGGGATGCCCAGGAGGCCATGAAGGACCAAATGGAGCACAGAGGTTGATTCAGCCTTACCTTGCGCCTCTATTTTGTTGCTAGCTACTCCCTCCGTTCTATAAAAAGTATAAATCTAAGACATGCGACATATTCTAATACTATGAATTTAATATAAATTAGGATATGTCACATCTGTTACGGTTTGTATTTTATGGTAAAGA GGGAGTAAGTCCCAAAGACATTTTGGCTGCCAACGGACAAGCTTTTGCGTTTTGTTAACCTGAGACCTGAGAGTTTAGTGTTAAATGTGAACTATGTGGGAACTAT    ]
[+] EMBL CB632921             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAAGCTAGAGAGGCTTTCGAGAGAGAGGAATATATGCTTGCAGGACAACACTACACTAATGCAATAGAACTTACCACTAATGCCCATGATAAGGCAACCCTGCTAGCAAACAGGAGCCTGTGCTGGTTGCGTTTGTCAACCGGCAATGGGGCTCTTGCTGATGCTAACATGTGCAGAATGTTGCGGCCCAGTTGGCCCAAAGCATGCTATCGACAAGGGGCAGCTTTCATGTTTCTAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAAGTTGGACCCTGCAAATGAAGATATAGCGAAAGCTTTAAGGGATGCCCAGGAGGCCATGAAGGACCAAATGGAGCACAGAGGTTGATTCAGCCTTACCTTGCGCCTCTATTTTGTTGCTAGCTACTCCCTCCGTTCTATAAAAAAAATAAATCTAAGACATGCGACATATTCTAATACTATAAATTTAATATAAATTAGGATATGTCACATCTGTTACGGTTTGTATTTTATGGTAAAGA GGGAGTAAGTCCCAAAGACATTTTGGCTGCCAACGGACAAGCTTTTGCGTTTTGTTAACCTGAGACCTGAGAGTTTAGTGTTAAATGTGAACTA                ]


>consensus_11791#0 CGCGCGCATCATCCAAATCCCACTACCGCTCCCTTCCAAAAACCAAACTCCGCAGTCTCT ACCAAACCCACGCCGGCGCCGCATCGTCTTCGTCTCGTCTCCTCCAGTCAAGTGCTAGCT AGGGCCTAGGCTGCCGCTCCCGCTCTCTCGCCTTCTTCACCCCCGAGCCTGATCGATGGG GAAGCAGGAGCAGGAGAAGATGCTCCTCCAGGCCGCCTACGATGACAACCTCCGCCTCCT CAGGAAGATGGCGCGAGGGCTGGACACCGGGCAGGGCGAGGCTGCCGTCGTGGCGGCGGT GGCGGGCAGGGCCGACGGGAACCGCGCTCTCCACCTGGCGGCCGCCCGAGGAAGCATGGA TGTCCTCAGGTACCTCGTGGAGGACCTCCACCTCAGCGTCAACCAGTTCAATGCCAAAGG TGAAACACCACTGTGCCTTTCTTCAATTCATGGGAGAGCTGCTGCTACAAGATATCTTCT CGATCACGGTTCTGATCCTACGATTGATAAATCAGTGTTACCTTTTCATGCTGCTGCAAC GAAAGGACACTGCGAAATAGTAGAGTTGTTTCTTTCAAGAGGAGTTGATGTGGATTTAGA TTCTATCACTGGGACCCCATTGCTGACAGCTGCGATGAATGGCCAATATAGCACGATGAA GATTTTATTGGAGCATCACGCTGATCCTAACAGGGTTGTCAATCATAATGGTACCCCATT GATTATGTCCATAGTTTCTGGATCATTGGAATGCGTGAAGCTATTAATCAAAGTTGGTGC TGATGTGAATTTTAGAGATCCCAATGGTGTTACTTGTGTGATGGTCGCAGCAAATCATGG CTCTCCTGTCATCATGAAGTGCTTACTAGATGCTGGTGCTAATTCAAATATTCCAGATGA ATTTAATAGGACTCCAATTGAAGTTGCCGCTAATCGAGGCAGAAGGGACATTGTTAAAAT GTTGTTTCCTTTAACTTCACCAATTTCAACACTGCCTGATTGGAGTATCGATGGAGTTAT TTCTCATGTGCAAACTTTTGGTTTGAAGCCAAGGGATAATGATCTGTCTAAAAGGAAAAG TGCTGAACTGAAATTACAAGCTAGAGAGGCTTTCGAGAGAGAGGAATATATGCTTGCAGG ACAACACTACACTAATGCAATAGAACTTACCACTAATGCTCATGATAAGGCAACCCTGCT AGCAAACAGGAGCCTGTGCTGGTTGCGTTTGTCAACCGGCAATGGGGCTCTTGCTGATGC TAACATGTGCAGAATGTTGCGGCCCAGTTGGCCCAAAGCATGCTATCGACAAGGGGCAGC TTTCATGTTTCTAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAAGTT GGACCCTGCAAATGAAGATATAGCGAAAGCTTTAAGGGATGCCCAGGAGGCCATGAAGGA CCAAATGGAGCACAGAGGTTGATTCAGCCTTACCTTGCGCCTCTATTTTGTTGCTAGCTA CTCCCTCCGTTCTATAAAAAGTATAAATCTAAGACATGCGACATATTCTAATACTATGAA TTTAATATAAATTAGGATATGTCACATCTGTTACGGTTTGTATTTTATGGTAAAGAGGGA GTAAGTCCCAAAGACATTTTGGCTGCCAACGGACAAGCTTTTGCGTTTTGTTAACCTGAG ACCTGAGAGTTTAGTGTTAAATGTGAACTATGTGGGAACTATTTCA



consensusID : consensus_11791#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 563
fasta sequence
                              [ACTTAGCACAAGTGCTCATGATAAGCCACCCTGCTAGCAAACAGGAGCCTATGCCTGTTGCGTTTGTCAACCGGCATTAGGGGCTATTTGCTGATGCTAACATGTTGCAGAATGTTGCGGCCCAGTTGGCCC-AAGCATGCTATCGACAAGGGGCAGCTTTCATGTTTATAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAAGTTGGACCCTGCAAATGAAGATATATAAGAAAGCTTTAAGGGATGCCGAGGAGGCCATGAAGAAAGACNAAATGGAGCGCAGAGGTTGAGTGTCAGCCTTATGTTGAGCCTCTATTTTGTTGCTAGCTGAAGTTCGTCCTTCATCAGCAACCCAGGACATTTTGGCCGCCAACGGACAAGCTTGTGCTCTTGCAAGCTTCAGATGGCAACTCGTGTTAATCGTGGTCGAATTAACAAGCTCCAATTGCACTCTTCACATTTCGTAGTATGTTCTCTGTTCTAGAGACTAGAGAGTTTAAATGTTAACTATATATGTGGAAACTATTTCATGGTTTGTGGAAAAAAAAAA]

[+] EMBL BI805926             [ACTTAGCACAAGTGCTCATGATAAGCCACCCTGCTAGCAAACAGGAGCCTATGCCTGTTGCGTTTGTCAACCGGCATTAGGGGCTATTTGCTGATGCTAACATGTTGCAGAATGTTGCGGCCCAGTTGGCCC AAGCATGCTATCGACAAGGGGCAGCTTTCATGTTTATAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAAGTTGGACCCTGCAAATGAAGATATATAAGAAAGCTTTAAGGGATGCCGAGGAGGCCATGAAGAAAGACNAAATGGAGCGCAGAGGTTGAGTGTCAGCCTTATGTTGAGCCTCTATTTTGTTGCTAGCTGAAGTTCGTCCTTCATCAGCAACCCAGGACATTTTGGCCGCCAACGGACAAGCTTGTGCTCTTGCAAGCTTCAGATGGCAACTCGTGTTAATCGTGGTCGAATTAACAAGCTCCAATTGCACTCTTCACATTTCGTAGTATGTTCTCTGTTCTAGAGACTAGAGAGTTTAAATGTTAACTATATATGTGGAAACTATTTCATGGTTTGTGGAAAAAAAAAA]
[+] EMBL BM419739             [                                                                                                           CAGAATGTTGCGGCCCAGTTGGCCCAAAGCATGCTATCGACAAGGGGCAGCTTTCATGTTTATAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAAGTTGGACCCTGCAAATGAAGATATA AAGAAAGCTTTAAGGGATGCCGAGGAGGCCATGAAGAAAGAC AAATGGAGCGCAGAGGTTGAGT TCAGCCTTATGTTGAGCCTCTATTTTGTTGCTAGCT AAGTTCGTCCTTCATCAGCAACCCAGGACATTTTGGCCGCCAACGGACAAGCTTGTGCTCTTGCAAGCTTCAGATGGCAACTCGTGTTAATCGTGGTCGAATTAACAAGCTCCAATTGCACTCTTCACATTTCGTAGTATGTTCTCTG TCTAGAGACTAGAGAGTTTAAATGTTAACTATATATGTGGAAACTATTTCATGGTTTGTGGAAAAAAAAAA]


>consensus_11791#1 ACTTAGCACAAGTGCTCATGATAAGCCACCCTGCTAGCAAACAGGAGCCTATGCCTGTTG CGTTTGTCAACCGGCATTAGGGGCTATTTGCTGATGCTAACATGTTGCAGAATGTTGCGG CCCAGTTGGCCCAAGCATGCTATCGACAAGGGGCAGCTTTCATGTTTATAAAGGACTATG GAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAAGTTGGACCCTGCAAATGAAGATATAT AAGAAAGCTTTAAGGGATGCCGAGGAGGCCATGAAGAAAGACNAAATGGAGCGCAGAGGT TGAGTGTCAGCCTTATGTTGAGCCTCTATTTTGTTGCTAGCTGAAGTTCGTCCTTCATCA GCAACCCAGGACATTTTGGCCGCCAACGGACAAGCTTGTGCTCTTGCAAGCTTCAGATGG CAACTCGTGTTAATCGTGGTCGAATTAACAAGCTCCAATTGCACTCTTCACATTTCGTAG TATGTTCTCTGTTCTAGAGACTAGAGAGTTTAAATGTTAACTATATATGTGGAAACTATT TCATGGTTTGTGGAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11791#0      CGCGCGCATCATCCAAATCCCACTACCGCTCCCTTCCAAAAACCAAACTCCGCAGTCTCT 60
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      ACCAAACCCACGCCGGCGCCGCATCGTCTTCGTCTCGTCTCCTCCAGTCAAGTGCTAGCT 120
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      AGGGCCTAGGCTGCCGCTCCCGCTCTCTCGCCTTCTTCACCCCCGAGCCTGATCGATGGG 180
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      GAAGCAGGAGCAGGAGAAGATGCTCCTCCAGGCCGCCTACGATGACAACCTCCGCCTCCT 240
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      CAGGAAGATGGCGCGAGGGCTGGACACCGGGCAGGGCGAGGCTGCCGTCGTGGCGGCGGT 300
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      GGCGGGCAGGGCCGACGGGAACCGCGCTCTCCACCTGGCGGCCGCCCGAGGAAGCATGGA 360
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      TGTCCTCAGGTACCTCGTGGAGGACCTCCACCTCAGCGTCAACCAGTTCAATGCCAAAGG 420
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      TGAAACACCACTGTGCCTTTCTTCAATTCATGGGAGAGCTGCTGCTACAAGATATCTTCT 480
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      CGATCACGGTTCTGATCCTACGATTGATAAATCAGTGTTACCTTTTCATGCTGCTGCAAC 540
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      GAAAGGACACTGCGAAATAGTAGAGTTGTTTCTTTCAAGAGGAGTTGATGTGGATTTAGA 600
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      TTCTATCACTGGGACCCCATTGCTGACAGCTGCGATGAATGGCCAATATAGCACGATGAA 660
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      GATTTTATTGGAGCATCACGCTGATCCTAACAGGGTTGTCAATCATAATGGTACCCCATT 720
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      GATTATGTCCATAGTTTCTGGATCATTGGAATGCGTGAAGCTATTAATCAAAGTTGGTGC 780
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      TGATGTGAATTTTAGAGATCCCAATGGTGTTACTTGTGTGATGGTCGCAGCAAATCATGG 840
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      CTCTCCTGTCATCATGAAGTGCTTACTAGATGCTGGTGCTAATTCAAATATTCCAGATGA 900
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      ATTTAATAGGACTCCAATTGAAGTTGCCGCTAATCGAGGCAGAAGGGACATTGTTAAAAT 960
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      GTTGTTTCCTTTAACTTCACCAATTTCAACACTGCCTGATTGGAGTATCGATGGAGTTAT 1020
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      TTCTCATGTGCAAACTTTTGGTTTGAAGCCAAGGGATAATGATCTGTCTAAAAGGAAAAG 1080
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      TGCTGAACTGAAATTACAAGCTAGAGAGGCTTTCGAGAGAGAGGAATATATGCTTGCAGG 1140
consensus_11791#1      ------------------------------------------------------------
                                                                                   

consensus_11791#0      ACAACACTACACTAATGCAATAGAACTTACCACTAATGCTCATGATAAGGCAACCCTGCT 1200
consensus_11791#1      ------------------------ACTTAGCACAAGTGCTCATGATAAGCCA-CCCTGCT 35
                                               ***** *** * ************* ** *******

consensus_11791#0      AGCAAACAGGAGCCTGTGCTGGTTGCGTTTGTCAACCGGCAAT-GGGGCT-CTTGCTGAT 1258
consensus_11791#1      AGCAAACAGGAGCCTATGCCTGTTGCGTTTGTCAACCGGCATTAGGGGCTATTTGCTGAT 95
                       *************** ***  ******************** * ******  ********

consensus_11791#0      GCTAACATGT-GCAGAATGTTGCGGCCCAGTTGGCCCAAAGCATGCTATCGACAAGGGGC 1317
consensus_11791#1      GCTAACATGTTGCAGAATGTTGCGGCCCAGTTGGCCCAA-GCATGCTATCGACAAGGGGC 154
                       ********** **************************** ********************

consensus_11791#0      AGCTTTCATGTTTCTAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAA 1377
consensus_11791#1      AGCTTTCATGTTTATAAAGGACTATGGAAAAGCTTGTGAAGCTTTTGCAGATGGCTTGAA 214
                       ************* **********************************************

consensus_11791#0      GTTGGACCCTGCAAATGAAGATATA-GCGAAAGCTTTAAGGGATGCCCAGGAGGCCATGA 1436
consensus_11791#1      GTTGGACCCTGCAAATGAAGATATATAAGAAAGCTTTAAGGGATGCCGAGGAGGCCATGA 274
                       *************************   ******************* ************

consensus_11791#0      AG---GACCAAATGGAGCACAGAGGTTGATT--CAGCCTTACCTTGCGCCTCTATTTTGT 1491
consensus_11791#1      AGAAAGACNAAATGGAGCGCAGAGGTTGAGTGTCAGCCTTATGTTGAGCCTCTATTTTGT 334
                       **   *** ********* ********** *  ********  *** *************

consensus_11791#0      TGCTAGCTACTCCCTCCGTTCTATAAAAAGTATAAATCTAAGACATGCGACATATTCTAA 1551
consensus_11791#1      TGCTAGCTGAAG--TTCGTCCTTCAT----CAGCAACCCAGGACAT--------TTTGGC 380
                       ********      * *** **  *      *  ** * * *****        **    

consensus_11791#0      TACTATGAATTTAATATAAATTAGGATATGTCACATCTGTTACGGTTTGTATTTTATGGT 1611
consensus_11791#1      CGCCAACGGACAAGCTTGTGCTCTTGCAAGCTTCAGATGGCAACTCGTGTTAATCGTGGT 440
                         * *       *   *    *     * *   **  **  *     ***   *  ****

consensus_11791#0      AAAGAGGGAGTAAGTCCCAAAGACATTTTGGCTGCCAACGGACAAGCTTTTGCGTTTTGT 1671
consensus_11791#1      C--GAATTAACAAGCTCCAATTGCACTCT---TCACATTTCGTAG---TATGTTCTCTGT 492
                          **   *  ***  ****   ** * *   *  **      *    * **   * ***

consensus_11791#0      TAACCTGAGACCTGAGAGTTTAG-TGTTAAATGTGAACTATGTGGGAACTATTTCA---- 1726
consensus_11791#1      T--CTAGAGACTAGAGAGTTTAAATGTTAACTATA---TATGTGGAAACTATTTCATGGT 547
                       *  *  *****  *********  ****** * *    ******* **********    

consensus_11791#0      ----------------
consensus_11791#1      TTGTGGAAAAAAAAAA 563
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)