These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11792#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2078 fasta sequence [GAATATTCCGGTGACAGCATTGGGCCGTCTCGCTCCCGCCACACGCGCGAATGCCGCTCCTCCACCTCTCGCCGCCGCCGCACCGCCTCCTCCTCGCCGGCGGCGGCCGCCGCCGCCTACTCCTCCCGGCGGCTCGCCGCCGCTCCCTCGTCCGCGTCAGGGCGGCGGCGTCGGCGGCCGCGGCCGCGGCGGAGGCGTACGGGCTACCCTTCCCTCCTGAGCGCGCCGCCCACCACCGGGAGCTCGCGGCGGCCGCCGCGGCCGTCGAGCGCGCCTGCCGCCTCTGCGTAGACGTGAAGAGAACGCTGCTTTCGGGTGACAAGAAGATTCTTGAAAAGAATGACCAAACTCCTGTCACAGTTGCAGATTTTGGAGTACAAGCTCTTATTAGTTTAGAGCTCCAGCGATTGTTTCCGTCAATACCTCTGGTGGCAGAAGAGGATTCAGCTTCTCTGAGGTCATCCAATACTGATGATAACAGTAGTAATGTTCTTGTTGAGTCAATTTCAAGTGCTGTTGCAGAAAAAGTGAGTAACGCCAATTCACTTTTAACTCATGATGATGTGCTGAGAGCTATTGATAGAGGAGGCAAGAATGCTGTATCCTTTGATTCAAATCCTGCTAGTTATTGGGTACTTGATCCAATTGATGGCACAAAAGGTTTCTTGGGAGGGGACGATGCTCTGTATGTGGTGGGGCTGGCTCTTGTGGTAAATGAAAAGGTAGTAGCAGGAGTGATGGGATGTCCTAATTGGTCTAATGCTACCATAGCCAGCAGAAAAGAAGACAGCGCTGCTGCCCAACCTGATCATGGGATCCTTATGATTGCTCATGTGGGCTGTGGAACTTGGTCTAGGCATTTGTCTGTCGATATTGGCCAGTTCACTACGGCACAGAGTACTTGGAATAGATGCTTAGTGGATTCTTGTTCAGTTGTGAACATGGCACGCTTTTGCATTCCTGATAGCCAAACCTGGAATATGATACCGCTATCTGTTCTCTTCAACTCAACAATGGATGAATCCAATCCTAGAGATGAGAATGAAATTCTCCTCTTATCTGTTTACTGTGGCAGCTTGTGCAAGTACCTAACTGTAGCTTCTGGGAGAGCCTCCGTTTTTGTACTTCGAGCACGGACGAAAAATCTCAAGTCTTGGGATCATGCTGTCGGAGTAATTTGTGTACAGGAAGCTGGAGGTCAGATTAGTGACTGGAGTGGGAAACCGTTGGATCTTGCAGCTGACCTAACTGGGCGCAGAGACATTTACCCTTCAGGTGGTGTTCTCGTCACCAACGGTGCTCTGCACGGCAAGCTGGTTGAAATGATCTCAGCAAATCACAAGTAGCGGCAAATTTTGCATAACTGCGCACATAACACAGATTTTTCTTTTGTTAACATTTTACCTCATCAACCATCAAAATGTATTTGGTCTCTCGTTCGGGAGAGAAACCTTGCAAACATGTTCAGATTACTTCCAGTATCATTACAACATACAACACAACAGATATACATGACAGAAGGCATTGTTCCCCAATGAACAATAGTACCTGATTACCTGAAGATACATGCAAATATGTTGCTGGTCTAAGTCATCCAACACCAAATTGCTTGCAGAATTATACAATCTTTTGCCTTCACAATGTGTGAATCTGTTGCATAATCCTGAAAGTTTGCATGGTTGCATAGCATCCACACACACCTGAAGCTTGTGAGGAGGAGAAAACTTGGACCAATCTGACAGCAGTGCACCATGCAGTGAATCAGGATGCTTTCGGTTTGGCCACCAATTCAAGCCGAAGAAAAGGACACCCAAAAGGTCTGCATCTTTGCCTCTTTGGCTCCATTTCAAGATAACGACCTTCATGTCCTAATGCAAGAATTGGCAGCTTCTAATCATGATTAGCCCAACAAATTCCATGATCAGCACGCACTTTACTGCTTGCTTACATCCTGAAGATCTTGCTCTCCATTGACACGTCCTCCAGCTACGAATTTCAGTAGATGGCCTGTAGTTGGATTCTTGTTGTAATCTATATTGACTTTTTTTTTCTTAAGCATTAATAAGAGCTACTGATCT] [+] EMBL AK065243 [GAATATTCCGGTGACAGCATTGGGCCGTCTCGCTCCCGCCACACGCGCGAATGCCGCTCCTCCACCTCTCGCCGCCGCCGCACCGCCTCCTCCTCGCCGGCGGCGGCCGCCGCCGCCTACTCCTCCCGGCGGCTCGCCGCCGCTCCCTCGTCCGCGTCAGGGCGGCGGCGTCGGCGGCCGCGGCCGCGGCGGAGGCGTACGGGCTACCCTTCCCTCCTGAGCGCGCCGCCCACCACCGGGAGCTCGCGGCGGCCGCCGCGGCCGTCGAGCGCGCCTGCCGCCTCTGCGTAGACGTGAAGAGAACGCTGCTTTCGGGTGACAAGAAGATTCTTGAAAAGAATGACCAAACTCCTGTCACAGTTGCAGATTTTGGAGTACAAGCTCTTATTAGTTTAGAGCTCCAGCGATTGTTTCCGTCAATACCTCTGGTGGCAGAAGAGGATTCAGCTTCTCTGAGGTCATCCAATACTGATGATAACAGTAGTAATGTTCTTGTTGAGTCAATTTCAAGTGCTGTTGCAGAAAAAGTGAGTAACGCCAATTCACTTTTAACTCATGATGATGTGCTGAGAGCTATTGATAGAGGAGGCAAGAATGCTGTATCCTTTGATTCAAATCCTGCTAGTTATTGGGTACTTGATCCAATTGATGGCACAAAAGGTTTCTTGGGAGGGGACGATGCTCTGTATGTGGTGGGGCTGGCTCTTGTGGTAAATGAAAAGGTAGTAGCAGGAGTGATGGGATGTCCTAATTGGTCTAATGCTACCATAGCCAGCAGAAAAGAAGTCAGCGCTGCTGCCCAACCTGATCATGGGATCCTTATGATTGCTCATGTGGGCTGTGGAACTTGGTCTAGGCATTTGTCTGTCGATATTGGCCAGTTCACTACGGCACAGAGTACTTGGAATAGATGCTTAGTGGATTCTTGTTCAGTTGTGAACATGGCACGCTTTTGCATTCCTGATAGCCAAACCTGGAATATGATACCGCTATCTGTTCTCTTCAACTCAACAATGGATGAATCCAATCCTAGAGATGAGAATGAAATTCTCCTCTTATCTGTTTACTGTGGCAGCTTGTGCAAGTACCTAACTGTAGCTTCTGGGAGAGCCTCCGTTTTTGTACTTCGGGCACGGACGAAAAATCTCAAGTCTTGGGATCATGCTGTCGGAGTAATTTGTGTACAGGAAGCTGGAGGTCAGATTAGTGACTGGAGTGGGAAACCGTTGGATCTTGCAGCTGACCTAACTGGGCGCAGAGACATTTACCCTTCAGGTGGTGTTCTCGTCACCAACGGTGCTCTGCACGGCAAGCTGGTTGAAATGATCTCAGCAAATCACAAGTAGCGGCAAATTTTGCATAACTGCGCACATAACACAGATTTTTCTTTTGTTAACATTTTACCTCATCAACCATCAAAATGTATTTGGTCTCTCGTTCGGGAGA ] [+] EMBL AK064484 [ TAGAGCTCCAGCGATTGTTTCCGTCAATACCTCTGGTGGCAGAAGAGGATTCAGCTTTTCTGAGGTCATCCAATACTGATGATAACAGTAGTAATGTTCTTGTTGAGTCAATTTCAAGTGCTGTTGCAGAAAAAGTGAGTAACGCCAATTCACTTTTAACTCATGATGATGTGCTGAGAGCTATTGATAGAGGAGGCAAGAATGCTGTATCCTTTGATTCAAATCCTGCTAGTTATTGGGTACTTGATCCAATTGATGGCACAAAAGGTTTCTTGGGAGGGGACGATGCTCTGTATGTGGTGGGGCTGGCTCTTGTGGTAAATGAAAAGGTAGTAGCAGGAGTGATGGGATGTCCTAATTGGTCTAATGCTACCATAGCCAGCAGAAAAGAAGACAGCGCTGCTGCCCAACCTGATCATGGGATCCTTATGATTGCTCATGTGGGCTGTGGAACTTGGTCTAGGCATTTGTCTGTCGATATTGGCCAGTTCACTACGGCACAGAGCACTTGGAATAGATGCCTAGTGGATTCTTGTTCAGTTGTGAACATGGCACGCTTTTGCATTCCTGATAGCCAAACCTGGAATATGATACCGCTATCTGTTCTCTTCAACTCAACAATGGATGAATCCAATCCTAGAGATGAGAATGAAATTCTCCTCTTATCTGTTTACTGTGGCAGCTTGTGCAAGTACCTAACTGTAGCTTCTGGGAGAGCCTCCGTTTTTGTACTTCGAGCACGGACGAAAAATCTCAAGTCTTGGGATCATGCTGTCGGAGTAATTTGTGTACAGGAAGCTGGAGGTCAGATTAGTGACTGGAGTGGGAAACCGTTGGATCTTGCAGCTGACCTAACTGGGCGCAGAGACATTTACCCTTCAGGTGGTGTTCTCGTCACCAACGGTGCTCTGCACGGCAAGCTGGTTGAAATGATCTCAGCAAATCACAAGTAGCGGCAAATTTTGCATAACTGCGCACATAACACAGATTTTTCTTTTGTTAACATTTTACCTCATCAACCATCAAAATGTATTTGGTCTCTCGTTCGGGAGAGAAACCTTGCAAACATGTTCAGATTACTTCCAGTATCATTACAACATACAACACAACAGATATACATGACAGAAGGCATTGTTCCCCAATGAACAATAGTACCTGATTACCTGAAGATACATGCAAATATGTTGCTGGTCTAAGTCATCCAACACCAAATTGCTTGCAGAATTATACAATCTTTTGCCTTCACAATGTGTGAATCTGTTGCATAATCCTGAAAGTTTGCATGGTTGCATAGCATCCACACACACCTGAAGCTTGTGAGGAGGAGAAAACTTGGACCAATCTGACAGCAGTGCACCATGCAGTGAATCAGGATGCTTTCGGTTTGGCCACCAATTCAAGCCGAAGAAAAGGACACCCAAAAGGTCTGCATCTTTGCCTCTTTGGCTCCATTTCAAGATAACGACCTTCATGTCCTAATGCAAGAATTGGCAGCTTCTAATCATGATTAGCCCAACAAATTCCATGATCAGCACGCACTTTACTGCTTGCTTACATCCTGAAGATCTTGCTCTCCATTGACACGTCCTCCAGCTACGAATTTCAGTAGATGGCCTGTAGTTGGATTCTTGTTGTAATCTATATTGACTTTTTTTTTCTTAAGCATTAATAAGAGCTACTGATCT] [-] EMBL CB641646 [ GAGTGATGGGATGTCCTAATTGGTCTAATGCTACCATAGCCAGCAGAAAAGAAGACAGCGCTGCTGCCCAACCTGATCATGGGATCCTTATGATTGCTCATGTGGGCTGTGGAACTTGGTCTAGGCATTTGTCTGTCGATATTGGCCAGTTCACTACGGCACAGAGTACTTGGAATAGATGCTTAGTGGATTCTTGTTCAGTTGTGAACATGGCACGCTTTTGCATTCCTGATAGCCAAACCTGGAATATGATACCGCTATCTGTTCTCTTCAACTCAACAATGGATGAATCCAATCCTAGAGATGAGAATGAAATTCTCCTCTTATCTGTTTACTGTGGCAGCTTGTGCAAGTACCTAACTGTAGCTTCTGGGAGAGCCTCCGTTTTTGTACTTCGAGCACGGACGAAAAATCTCAAGTCTTGGGATCATGCTGTCGGAGTAATTTGTGTACAGGAAGCTGGAGGTCAGATTAGTGACTGGAGTGGGAAACCGTTGGATCTTGCAGCTGACCTAACTGGGCGCAGAGACATTTACCCTTCAGGTGGTGTTCTCGTCACCAACGGTGCTCTGCACGGCAAGCTGGTTGAAATGATCTCAGCAAATCACAAGTAGCGGCAAATTTTGCATAACTGCGCACATAACACAGATTTTTCTTTTGTTAACATTTTACCTCATCAACCATCAAAATGTATTTGGTCTCTCGTTCGGGAGAGAAACCTTGCAAACATGTTCAGATTACTTCCAGTATCATTACAACATACAACACAACAGAT ] consensusID : consensus_11792#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1529 fasta sequence [ATTCGATCGAGGCTTTCGCTCCCGCCACACACGCGAAAATGCCGCTCCTCCACATCTCCCTCCCGCCGCACCGCCTCCTCCTCGTCGCCGGCGGCCGCCGCCGCCGCCGCCGGCTGCTACTCCTCCCGCCGTCTCCCCGCCGCGTCTGCGTAAGGGCGGCGGCGTCGGTGGAGTTGGAGGTGGCCGCGGCCGCGGGGGAGTACGGGCTCCCCTTCCCGTCGGAGCGCGCCGCCCACCACCGCGAGCTCGCCGCGGCCGCCGCCGCCGTCGAGCGCGCCTGCCGCCTCTGCGTAGACGTCAAGAGATCACTG-CTTTCAGGTGAGAAGAAAATTTTCGAAAAGAATGACCAAACTCTTGTCACAGTTGCGGATTTTGGAGTGCAAGCCCTTATTAGTTTAGAGCTCCAGCGATCGTTTCCATCAATTCCTCTTGTGGCAGAAGAGGATTCAGCTTCTTTAAGGTCATCTAATGCTGATAACAGTAGCAATGTGCTTGTTGAGTCAATTTCAAGTGCTGTTGCCGACAATGTGAGTAACACCGATTCACTTTTAACTCATGATGATGTGCTGAGAGCTATTGACAAAGGAGGCAAGGATAGTGCATCCTTTGATTCAAATCCCGCTACTTATTGGGTACTTGATCCAATTGATGGTACACAAGGTTTCTCGAAAGTGGATGATACTCTGTATGTGGTGGGCTTGGCTCTTGTGGTGAATGGAAAAGTAGTAGCAGGAGTCATGGGAAGTCCTAATTGGGCCAGTGATACCATAGCCAACAGAAAAGATGACAGCATTGCTTCCCGTTATGATCGTGGGATCCTTATGATTGCTCATGAGGGTTGTGGTGCTTGGACTAAGCGCCTGTATGATGAGTTTGGCCAGTTCACTACGTCAAAGGATACTTGGAACAGATGCTTCGTGGATTCTTGTTCTGTTGTACACAAGGCACGCTATTGCCTTTCCGATAACCAAACCTGGAATATGATACCACTATCTGTTGTGTTCAACTCAACGACGGATGAATCGAAACCTAGAGATGAGAATGAACTTCTTACTTCATATGTTTTCTCTGGCAGTTTGTGCAAGTACCTTACTGTAGCCTATGGGAGAGCCTCAGTTTTCGTCCTTAAAGCACGGACGAAAAGCCTCAAGTCTTGGGATCATACTGTAGGAGTAATTTGTGTGCAGGAAGCTGGAGGCCAAGTTACTGACTGGAGAGGGGAACCTTTGGATCTTGAAGCTGACCTAACTGGGCGCAGAGACATTTACCCTCATGGTGGCATTCTCATCACCAACGGCGTCCTGCACAACAAGCTTGCTGAATTGATCAAGGCGAATTACTAAGTAGCTGCAATGTTGCATATATAGCTCCACACATGACACATTTTTTTTGGGGTAGCATTTTACCTCACCGACCATCAAGCTGTATTTGGTCTCTCATCCAGGAGAGAAACCTTGCAAACATGTCCATATCACTTATCACCTCTAATATCATTACAGCAACAGATATGCATGACAGAAAAAAAAAGG] [+] EMBL AK120618 [ATTCGATCGAGGCTTTCGCTCCCGCCACACACGCGAAAATGCCGCTCCTCCACATCTCCCTCCCGCCGCACCGCCTCCTCCTCGTCGCCGGCGGCCGCCGCCGCCGCCGCCGGCTGCTACTCCTCCCGCCGTCTCCCCGCCGCGTCTGCGTAAGGGCGGCGGCGTCGGTGGAGTTGGAGGTGGCCGCGGCCGCGGGGGAGTACGGGCTCCCCTTCCCGTCGGAGCGCGCCGCCCACCACCGCGAGCTCGCCGCGGCCGCCGCCGCCGTCGAGCGCGCCTGCCGCCTCTGCGTAGACGTCAAGAGATCACTG CTTTCAGGTGAGAAGAAAATTTTCGAAAAGAATGACCAAACTCTTGTCACAGTTGCGGATTTTGGAGTGCAAGCCCTTATTAGTTTAGAGCTCCAGCGATCGTTTCCATCAATTCCTCTTGTGGCAGAAGAGGATTCAGCTTCTTTAAGGTCATCTAATGCTGATAACAGTAGCAATGTGCTTGTTGAGTCAATTTCAAGTGCTGTTGCCGACAATGTGAGTAACACCGATTCACTTTTAACTCATGATGATGTGCTGAGAGCTATTGACAAAGGAGGCAAGGATAGTGCATCCTTTGATTCAAATCCCGCTACTTATTGGGTACTTGATCCAATTGATGGTACACAAGGTTTCTCGAAAGTGGATGATACTCTGTATGTGGTGGGCTTGGCTCTTGTGGTGAATGGAAAAGTAGTAGCAGGAGTCATGGGAAGTCCTAATTGGGCCAGTGATACCATAGCCAACAGAAAAGATGACAGCATTGCTTCCCGTTATGATCGTGGGATCCTTATGATTGCTCATGAGGGTTGTGGTGCTTGGACTAAGCGCCTGTATGATGAGTTTGGCCAGTTCACTACGTCAAAGGATACTTGGAACAGATGCTTCGTGGATTCTTGTTCTGTTGTACACAAGGCACGCTATTGCCTTTCCGATAACCAAACCTGGAATATGATACCACTATCTGTTGTGTTCAACTCAACGACGGATGAATCGAAACCTAGAGATGAGAATGAACTTCTTACTTCATATGTTTTCTCTGGCAGTTTGTGCAAGTACCTTACTGTAGCCTATGGGAGAGCCTCAGTTTTCGTCCTTAAAGCACGGACGAAAAGCCTCAAGTCTTGGGATCATACTGTAGGAGTAATTTGTGTGCAGGAAGCTGGAGGCCAAGTTACTGACTGGAGAGGGGAACCTTTGGATCTTGAAGCTGACCTAACTGGGCGCAGAGACATTTACCCTCATGGTGGCATTCTCATCACCAACGGCGTCCTGCACAACAAGCTTGCTGAATTGATCAAGGCGAATTACTAAGTAGCTGCAATGTTGCATATATAGCTCCACACATGACACATTTTTTTTGGGGTAGCATTTTACCTCACCGACCATCAAGCTGTATTTGGTCTCTCATCCAGGAGAGAAACCTTGCAAACATGTCCATATCACTTATCACCTCTAATATCATTACAGCAACAGAT ] [+] EMBL CB678538 [ CCTCCCCCTGCACCGCCTCCTCCTCGTCGCCGGCGGCCGCCGCCGCCGCCGCCGGCTGCTACTCCTCCCGCCGTCTCCCCGCCGCGTCTGCGTAAGGGCGGCGGCGTCAGTGGAGTTGGAGGTGGCCGCGGCCGCGGGGGAGTACGGGCTCCCCTTCCCGTCGGAGCGCGCCGCCCACCACCGCGAGCTCGCCGCGGCCGCCGCCGCCGACGAGCGCGCCTGCCGCCTCTGCGTAGACGTCAAGAGATCACTGTCTTTCAGGTGAGAAGAAAATTTTCGAAAAGAATGACCAAACTCTTGTCACAGTTGCGGATTTTGGAGTGCAAGCCCTTATTAGATTACAGCTCCAGCGATCGTTTCCATCAATTCCTCTTGTGGCACAAGAGGATTCAACTTCTTTAAGGTCATCTAATGCTGATAACAGTACCAATGTGCTTGTTGAGACAATTTCAAGTGCTGTTGCCGACAATGTGAGTAACACCGATTCACTTTTAACTCATGATGATGTGCTGAGAGCTATTGACAAAGGAGGCAAGGATAGTGCATCCTTTGATTCAAATCCCGCTACTTATTGGGTACTTGATCCAATTGATGGAACACAAGGTTTCTCGAAAGTGGA ] [+] EMBL CB682915 [ TTGATTCAAATCCCGCTACTTATTGGGTACTTGATCCAATTGATGGTACACAAGGTTTCTCGAAAGTGGATGATACTCTGTATGTGGTGGGCTTGGCTCTTGTGGTGAATGGAAAAGTAGTAGCAGGAGTCATGGGAAGTCCTAATTGGGCCAGTGATACCATAGCCAACAGAAAAGATGACAGCATTGCTTCCCGTTATGATCGTGGGATCCTTATGATTGCTCATGAGGGTTGTGGTGCTTGGACTAAGCGCCTGTATGATGAGTTTGGCCAGTTCACTACGTCAAAGGATACTTGGAACAGATGCTTCGTGGATTCTTGTTCTGTTGTACACAAGGCACGCTATTGCCTTTCCGATAACCAAACCTGGAATATGATACCACTATCTGTTGTGTTCAACTCAACGACGGATGAATCGAAACCTAGAGATGAGAATGAACTTCTTACTTCATATGTTTTCTCTGGCAGTTTGTGCAAGTACCTTACTGTAGCCTATGGGAGAGCCTCAGTTTTCGTCCTTAAAGCACGGACGAAAAGCCTCAAGTCTTGGGATCATACTGTAGGAGTAATTTGTGTGCAGGAAGCTGGAGGCCAAGTTACTGACTGGAGAGGGGAACCTTTGGATCTTGAAGCTGACCTAACTGGGCGCAGAGACATTTACCCTCATGGTGGCATTCTCATCACCAACGGCGTCCTGCACAACAAGCTTGCTGAATTGATCAAGGCGAATTACTAAGTAGCTGCAATGTTGCATATATAGCTCCACACATGACACATTTTTTTTGGGGTAGCATTT ] [-] EMBL CB682916 [ TAGTAGCAGGAGTCATGGGAAGTCCTAATTGGGCCAGTGATACCATAGCCAACAGAAAAGATGACAGCATTGCTTCCCGTTATGATCGTGGGATCCTTATGATTGCTCATGAGGGTTGTGGTGCTTGGACTAAGCGCCTGTATGATGAGTTTGGCCAGTTCACTACGTCAAAGGATACTTGGAACAGATGCTTCGTGGATTCTTGTTCTGTTGTACACAAGGCACGCTATTGCCTTTCCGATAACCAAACCTGGAATATGATACCACTATCTGTTGTGTTCAACTCAACGACGGATGAATCGAAACCTAGAGATGAGAATGAACTTCTTACTTCATATGTTTTCTCTGGCAGTTTGTGCAAGTACCTTACTGTAGCCTATGGGAGAGCCTCAGTTTTCGTCCTTAAAGCACGGACGAAAAGCCTCAAGTCTTGGGATCATACTGTAGGAGTAATTTGTGTGCAGGAAGCTGGAGGCCAAGTTACTGACTGGAGAGGGGAACCTTTGGATCTTGAAGCTGACCTAACTGGGCGCAGAGACATTTACCCTCATGGTGGCATTCTCATCACCAACGGCGTCCTGCACAACAAGCTTGCTGAATTGATCAAGGCGAATTACTAAGTAGCTGCAATGTTGCATATATAGCTCCACACATGACACATTTTTTTTGGGGTAGCATTTTACCTCACCGACCATCAAGCTGTATTTGGTCTCTCATCCAGGAGAGAAACCTTGCAAACATGTCCATATCACTTATCACCTCTAATATCATTACAGCAACAGATATGCATGACAGAAAAAAAAAGG] consensusID : consensus_11792#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 810 fasta sequence [TAGTAGCAGGAGTCATGGGAAGTCCTAATGGGGCCAGTGATACCATAGCCAACAGAAAAGATGACAGCATTGCTTCCCGTTATGATCGTGGGATCCTTATGATTGCTCATGAGGGTTGTGGTGCTTGGACTAAGCGCCTGTATGATGAGTTTGGCCAGTTCACTACGTCAAAGGATACTTGGAACAGATGCTTCGTGGATTCTTGTTCTGTTGTACACAAGGCACGCTATTGCCTTTCCGATAACCAAACCTGGAATATGATACCACTATCTGTTGTGTTCAACTCAACGACGGATGAATCGAAACCTAGAGATGAGAATGAACTTCTTACTTCATATGTTTTCTCTGGCAGTTTGTGCAAGTACCTTACTGTAGCCTATGGGAGAGCCTCAGTTTTCGTCCTTAAAGCACGGACGAAAAGCCTCAAGTCTTGGGATCATACTGTAGGAGTAATTTGTGTGCAGGAAGCTGGAGGCCAAGTTACTGACTGGAGAGGGGAACCTTTGGATCTTGAAGCTGACCTAACTGGGCGCAGAGACATTTACCCTCATGGTGGCATTCTCATCACCAACGGCGTCCTGCACAACAAGCTTGCTGAATTGATCAAGGCGAATTACTAAGTAGCTGCAATGTTGCATATATAGCTCCACACATGACACATTTTTTTTGGGGTAGCATTTTACCTCACCGACCATCAAGCTGTATTTGGTCTCTCATCCAGGAGAGAAACCTTGCAAACATGTCCATATCACTTATCACCTCTAATATCATTACAGCAACAGATATGCATGACAGAATACACTGTTCCCC] [-] EMBL CB678539 [TAGTAGCAGGAGTCATGGGAAGTCCTAATGGGGCCAGTGATACCATAGCCAACAGAAAAGATGACAGCATTGCTTCCCGTTATGATCGTGGGATCCTTATGATTGCTCATGAGGGTTGTGGTGCTTGGACTAAGCGCCTGTATGATGAGTTTGGCCAGTTCACTACGTCAAAGGATACTTGGAACAGATGCTTCGTGGATTCTTGTTCTGTTGTACACAAGGCACGCTATTGCCTTTCCGATAACCAAACCTGGAATATGATACCACTATCTGTTGTGTTCAACTCAACGACGGATGAATCGAAACCTAGAGATGAGAATGAACTTCTTACTTCATATGTTTTCTCTGGCAGTTTGTGCAAGTACCTTACTGTAGCCTATGGGAGAGCCTCAGTTTTCGTCCTTAAAGCACGGACGAAAAGCCTCAAGTCTTGGGATCATACTGTAGGAGTAATTTGTGTGCAGGAAGCTGGAGGCCAAGTTACTGACTGGAGAGGGGAACCTTTGGATCTTGAAGCTGACCTAACTGGGCGCAGAGACATTTACCCTCATGGTGGCATTCTCATCACCAACGGCGTCCTGCACAACAAGCTTGCTGAATTGATCAAGGCGAATTACTAAGTAGCTGCAATGTTGCATATATAGCTCCACACATGACACATTTTTTTTGGGGTAGCATTTTACCTCACCGACCATCAAGCTGTATTTGGTCTCTCATCCAGGAGAGAAACCTTGCAAACATGTCCATATCACTTATCACCTCTAATATCATTACAGCAACAGATATGCATGACAGAATACACTGTTCCCC] [+] EMBL CF589233 [ ACAGCATTGCTTCCCGTTATGATCGTGGGATCCTTATGATTGCTCATGAGGGTTGTGGTGCTTGGACTAAGCGCCTGTATGATGAGTTTGGCCAGTTCACTACGTCAAAGGATACTTGGAACAGATGCTTCGTGGATTCTTGTTCTGTTGTACACAAGGCACGCTATTGCCTTTCCGATAACCAAACCTGGAATATGATACCACTATCTGTTGTGTTCAACTCAACGACGGATGAATCGAAACCTAGAGATGAGAATGAACTTCTTACTTCATATGTTTTCTCTGGCAGTTTGTGCAAGTACCTTACTGTAGCCTATGGGAGAGCCTCAGTTTTCGTCCTTAAAGCACGGACGAAAAGCCTCAAGTCTTGGGATCATACTGTAGGAGTAATTTGTGTGCAGGAAGCTGGAGGCCAAGTTACTGACTGGAGAGGGGAACCTTTGGATCTTGAAGCTGACCTAACTGGGCGCAGAGACATTTACCCTCATGGTGGCATTCTCATCACCAACGGCGTCCTGCACAACAAGCTTGCTGAATTGATCAAGGCGAATTACTAAGTAGCTGCAATGTTGCATATATAGCTCCACACATGACACATTTTTTTTGGGGTAGCATTTTACCTCACCGACCATCAAGCTGTATTTGGTCTCTCATCCAGGAGAGAAACCTTGCAAACATGTCCATATCACTTATCACCTCT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11792#1 ------------ATTCGATCGAGGCTTTCGCTCCCGCCACACACGCGAAAATGCCGCTCC 48 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 GAATATTCCGGTGACAGCATTGGGCCGTCTCGCTCCCGCCACACGCGCGAATGCCGCTCC 60 consensus_11792#1 TCCACATCTCCCTCCCGCCGCACCGCCTCCTCCTCGTCGCCGGCGGCCGCCGCCGCCGCC 108 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 TCCACCTCTCGCCGCCGCCGCACCGCCTCCTCCTCGCCGGCGGCGGCCGCCGCCGCC--- 117 consensus_11792#1 GCCGGCTGCTACTCCTCCCGCCGTCTCCCCGCCGCGTCTGCGTAAGGGCGGCGGCGTCGG 168 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 ---------TACTCCTCCCGGCGGCTCGCCGCCGCTCCCTCGTCCGCGTCAGGGCG---G 165 consensus_11792#1 TGGAGTTGGAGGTGGCCGCGGCCGCGGGGGAGTACGGGCTCCCCTTCCCGTCGGAGCGCG 228 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 CGGCGTCGGCGGCCGCGGCCGCGGCGGAGGCGTACGGGCTACCCTTCCCTCCTGAGCGCG 225 consensus_11792#1 CCGCCCACCACCGCGAGCTCGCCGCGGCCGCCGCCGCCGTCGAGCGCGCCTGCCGCCTCT 288 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 CCGCCCACCACCGGGAGCTCGCGGCGGCCGCCGCGGCCGTCGAGCGCGCCTGCCGCCTCT 285 consensus_11792#1 GCGTAGACGTCAAGAGATCACTGCTTTCAGGTGAGAAGAAAATTTTCGAAAAGAATGACC 348 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 GCGTAGACGTGAAGAGAACGCTGCTTTCGGGTGACAAGAAGATTCTTGAAAAGAATGACC 345 consensus_11792#1 AAACTCTTGTCACAGTTGCGGATTTTGGAGTGCAAGCCCTTATTAGTTTAGAGCTCCAGC 408 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 AAACTCCTGTCACAGTTGCAGATTTTGGAGTACAAGCTCTTATTAGTTTAGAGCTCCAGC 405 consensus_11792#1 GATCGTTTCCATCAATTCCTCTTGTGGCAGAAGAGGATTCAGCTTCTTTAAGGTCATCTA 468 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 GATTGTTTCCGTCAATACCTCTGGTGGCAGAAGAGGATTCAGCTTCTCTGAGGTCATCCA 465 consensus_11792#1 ATGCTGAT---AACAGTAGCAATGTGCTTGTTGAGTCAATTTCAAGTGCTGTTGCCGACA 525 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 ATACTGATGATAACAGTAGTAATGTTCTTGTTGAGTCAATTTCAAGTGCTGTTGCAGAAA 525 consensus_11792#1 ATGTGAGTAACACCGATTCACTTTTAACTCATGATGATGTGCTGAGAGCTATTGACAAAG 585 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 AAGTGAGTAACGCCAATTCACTTTTAACTCATGATGATGTGCTGAGAGCTATTGATAGAG 585 consensus_11792#1 GAGGCAAGGATAGTGCATCCTTTGATTCAAATCCCGCTACTTATTGGGTACTTGATCCAA 645 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 GAGGCAAGAATGCTGTATCCTTTGATTCAAATCCTGCTAGTTATTGGGTACTTGATCCAA 645 consensus_11792#1 TTGATGGTACACAAGGTTTCTCGAAAGTGGATGATACTCTGTATGTGGTGGGCTTGGCTC 705 consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 TTGATGGCACAAAAGGTTTCTTGGGAGGGGACGATGCTCTGTATGTGGTGGGGCTGGCTC 705 consensus_11792#1 TTGTGGTGAATGGAAAAGTAGTAGCAGGAGTCATGGGAAGTCCTAATTGGGCCAGTGATA 765 consensus_11792#2 ------------------TAGTAGCAGGAGTCATGGGAAGTCCTAATGGGGCCAGTGATA 42 consensus_11792#0 TTGTGGTAAATGAAAAGGTAGTAGCAGGAGTGATGGGATGTCCTAATTGGTCTAATGCTA 765 ************* ****** ******** ** * * ** ** consensus_11792#1 CCATAGCCAACAGAAAAGATGACAGCATTGCTTCCCGTTATGATCGTGGGATCCTTATGA 825 consensus_11792#2 CCATAGCCAACAGAAAAGATGACAGCATTGCTTCCCGTTATGATCGTGGGATCCTTATGA 102 consensus_11792#0 CCATAGCCAGCAGAAAAGAAGACAGCGCTGCTGCCCAACCTGATCATGGGATCCTTATGA 825 ********* ********* ****** **** *** ***** ************** consensus_11792#1 TTGCTCATGAGGGTTGTGGTGCTTGGACTAAGCGCCTGTATGATGAGTTTGGCCAGTTCA 885 consensus_11792#2 TTGCTCATGAGGGTTGTGGTGCTTGGACTAAGCGCCTGTATGATGAGTTTGGCCAGTTCA 162 consensus_11792#0 TTGCTCATGTGGGCTGTGGAACTTGGTCTAGGCATTTGTCTGTCGATATTGGCCAGTTCA 885 ********* *** ***** ***** *** ** *** ** ** ************ consensus_11792#1 CTACGTCAAAGGATACTTGGAACAGATGCTTCGTGGATTCTTGTTCTGTTGTACACAAGG 945 consensus_11792#2 CTACGTCAAAGGATACTTGGAACAGATGCTTCGTGGATTCTTGTTCTGTTGTACACAAGG 222 consensus_11792#0 CTACGGCACAGAGTACTTGGAATAGATGCTTAGTGGATTCTTGTTCAGTTGTGAACATGG 945 ***** ** ** ********* ******** ************** ***** *** ** consensus_11792#1 CACGCTATTGCCTTTCCGATAACCAAACCTGGAATATGATACCACTATCTGTTGTGTTCA 1005 consensus_11792#2 CACGCTATTGCCTTTCCGATAACCAAACCTGGAATATGATACCACTATCTGTTGTGTTCA 282 consensus_11792#0 CACGCTTTTGCATTCCTGATAGCCAAACCTGGAATATGATACCGCTATCTGTTCTCTTCA 1005 ****** **** ** * **** ********************* ********* * **** consensus_11792#1 ACTCAACGACGGATGAATCGAAACCTAGAGATGAGAATGAACTTCTTACTTCATATGTTT 1065 consensus_11792#2 ACTCAACGACGGATGAATCGAAACCTAGAGATGAGAATGAACTTCTTACTTCATATGTTT 342 consensus_11792#0 ACTCAACAATGGATGAATCCAATCCTAGAGATGAGAATGAAATTCTCCTCTTATCTGTTT 1065 ******* * ********* ** ****************** **** * ** ***** consensus_11792#1 TCTCTGGCAGTTTGTGCAAGTACCTTACTGTAGCCTATGGGAGAGCCTCAGTTTTCGTCC 1125 consensus_11792#2 TCTCTGGCAGTTTGTGCAAGTACCTTACTGTAGCCTATGGGAGAGCCTCAGTTTTCGTCC 402 consensus_11792#0 ACTGTGGCAGCTTGTGCAAGTACCTAACTGTAGCTTCTGGGAGAGCCTCCGTTTTTGTAC 1125 ** ****** ************** ******** * ************ ***** ** * consensus_11792#1 TTAAAGCACGGACGAAAAGCCTCAAGTCTTGGGATCATACTGTAGGAGTAATTTGTGTGC 1185 consensus_11792#2 TTAAAGCACGGACGAAAAGCCTCAAGTCTTGGGATCATACTGTAGGAGTAATTTGTGTGC 462 consensus_11792#0 TTCGAGCACGGACGAAAAATCTCAAGTCTTGGGATCATGCTGTCGGAGTAATTTGTGTAC 1185 ** ************** ****************** **** ************** * consensus_11792#1 AGGAAGCTGGAGGCCAAGTTACTGACTGGAGAGGGGAACCTTTGGATCTTGAAGCTGACC 1245 consensus_11792#2 AGGAAGCTGGAGGCCAAGTTACTGACTGGAGAGGGGAACCTTTGGATCTTGAAGCTGACC 522 consensus_11792#0 AGGAAGCTGGAGGTCAGATTAGTGACTGGAGTGGGAAACCGTTGGATCTTGCAGCTGACC 1245 ************* ** *** ********* *** **** ********** ******** consensus_11792#1 TAACTGGGCGCAGAGACATTTACCCTCATGGTGGCATTCTCATCACCAACGGCGTCCTGC 1305 consensus_11792#2 TAACTGGGCGCAGAGACATTTACCCTCATGGTGGCATTCTCATCACCAACGGCGTCCTGC 582 consensus_11792#0 TAACTGGGCGCAGAGACATTTACCCTTCAGGTGGTGTTCTCGTCACCAACGGTGCTCTGC 1305 ************************** ***** ***** ********** * **** consensus_11792#1 ACAACAAGCTTGCTGAATTGATCAAGGCGAATTACTAAGTAGCTGCAATGTTGCATATAT 1365 consensus_11792#2 ACAACAAGCTTGCTGAATTGATCAAGGCGAATTACTAAGTAGCTGCAATGTTGCATATAT 642 consensus_11792#0 ACGGCAAGCTGGTTGAAATGATCTCAGCAAATCAC-AAGTAGCGGCAAATTT---TGCAT 1361 ** ****** * **** ***** ** *** ** ******* **** ** * ** consensus_11792#1 AGCTCCACACATGACACA--TTTTTTTTGGGGTAGCATTTTACCTCACCGACCATCAAGC 1423 consensus_11792#2 AGCTCCACACATGACACA--TTTTTTTTGGGGTAGCATTTTACCTCACCGACCATCAAGC 700 consensus_11792#0 AACTGCGCACATAACACAGATTTTTCTTTTGTTAACATTTTACCTCATCAACCATCAAAA 1421 * ** * ***** ***** ***** ** * ** ************ * ******** consensus_11792#1 TGTATTTGGTCTCTCATCCAGGAGAGAAACCTTGCAAACATGTCCATATCACTTATCACC 1483 consensus_11792#2 TGTATTTGGTCTCTCATCCAGGAGAGAAACCTTGCAAACATGTCCATATCACTTATCACC 760 consensus_11792#0 TGTATTTGGTCTCTCGTTCGGGAGAGAAACCTTGCAAACATGTTCAGATTACTTCCAGTA 1481 *************** * * *********************** ** ** **** consensus_11792#1 TC-TAATATCAT-TACAGCAACAGATATGCATGACAGAAAAAAAAAGG------------ 1529 consensus_11792#2 TC-TAATATCAT-TACAGCAACAGATATGCATGACAGAATACACTGTTCCCC-------- 810 consensus_11792#0 TCATTACAACATACAACACAACAGATATACATGACAGAAGGCATTGTTCCCCAATGAACA 1541 ** * * * *** * ********** ********** * consensus_11792#1 ------------------------------------------------------------ consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 ATAGTACCTGATTACCTGAAGATACATGCAAATATGTTGCTGGTCTAAGTCATCCAACAC 1601 consensus_11792#1 ------------------------------------------------------------ consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 CAAATTGCTTGCAGAATTATACAATCTTTTGCCTTCACAATGTGTGAATCTGTTGCATAA 1661 consensus_11792#1 ------------------------------------------------------------ consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 TCCTGAAAGTTTGCATGGTTGCATAGCATCCACACACACCTGAAGCTTGTGAGGAGGAGA 1721 consensus_11792#1 ------------------------------------------------------------ consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 AAACTTGGACCAATCTGACAGCAGTGCACCATGCAGTGAATCAGGATGCTTTCGGTTTGG 1781 consensus_11792#1 ------------------------------------------------------------ consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 CCACCAATTCAAGCCGAAGAAAAGGACACCCAAAAGGTCTGCATCTTTGCCTCTTTGGCT 1841 consensus_11792#1 ------------------------------------------------------------ consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 CCATTTCAAGATAACGACCTTCATGTCCTAATGCAAGAATTGGCAGCTTCTAATCATGAT 1901 consensus_11792#1 ------------------------------------------------------------ consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 TAGCCCAACAAATTCCATGATCAGCACGCACTTTACTGCTTGCTTACATCCTGAAGATCT 1961 consensus_11792#1 ------------------------------------------------------------ consensus_11792#2 ------------------------------------------------------------ consensus_11792#0 TGCTCTCCATTGACACGTCCTCCAGCTACGAATTTCAGTAGATGGCCTGTAGTTGGATTC 2021 consensus_11792#1 --------------------------------------------------------- consensus_11792#2 --------------------------------------------------------- consensus_11792#0 TTGTTGTAATCTATATTGACTTTTTTTTTCTTAAGCATTAATAAGAGCTACTGATCT 2078 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||