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Oryza sativa
cluster # 11841 cluster # 11841       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11841#0 length = 1982 sequences # 8  
consensus_11841#1 length = 514 sequences # 1  

consensusID : consensus_11841#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1982
fasta sequence
                              [TTGGTTGGGCAACGAATGCGAACCTACTTCTCCTAGTATACTGCTTTTACTTTAGCCATCGCCACCACCGCCATTCCTGGAACCCCCTTCCCTCTTCCTCCCTCGGATCTCTCCTCGCTCGCGCGTTCG-GCCGCCGCCTTCCCCCTTCCCCCGTTGATTGATTGGGAGGAGGATCAATGGAGTGCGTCCGCTCCGGCTCCGGGGTTCTTGATCCCAGGTGCTCTCCGCGGTTCCTGGGGAAGAAGGGTGGTTCGCTCACGTCATGTGGTAAAGCCACTTCTACAAATCTTGCCATTTGTACCAAACACGAGCAAAACTTGCATGGGAATGTTAAACCCTCACAGTTAGCAGCAAGT-GGATCCTCTTATTCTGTTCACAGAAGTCCAGTGCTTAAGCAGAGACAGAATCTTTCTGCTAGGTCTACCTC-TGCAGATGTATATACTACTTTTGATGAAAATGTCAGAGCTGTATCTTCACATGCTGCTGAAGAAAAGGTTGGAGTACTCTTATTAAACCTTGGTGGCCCAGAGACACTGG-ATGATGTTCAGCCATTTCTATTCAACCTGTTTGCTGACCCAGATATCATCCGTTTGCCAAGGCTGTTCAGGTTTCTTCAAAGACCATTGGCCAAGCTTATCTCCACTTTTAGAGCTCCAAAGAGTAAGGAGGGGTACGCTTCAATCGGTGGAGGATCACCTTTGCGGAAAATTACTGATGAGCAGGCAAATGCTTTGAAGGTGGCACTGAAAAAGAAGAATTTGAATGCTAATATATATGTTGGAATGCGATACTGGTACCCTTTTACAGAAGAAGCCATTGATCAGATTAAGAAGGATAAGATTACAAAGCTTGTCGTTCTTCCACTGTACCCTCAATACTCCATATCGACAAGTGGATCAAGCATCCGTGTTCTCCAAAACATTGTCAAGGAGGATTCATATTTTGCTGGATTGCCAATTTCCATTATCGAATCATGGTACCAACGTGACGGTTATGTGAAATCAATGGCTGACTTAATTGAAAAGGAACTGTCAATTTTTTCCAATCCTGAAGAGGTTATGATATTCTTCAGTGCACATGGAGTACCACTTACCTATGTTACGGATGCTGGAGATCCTTACAGAGATCAGATGGAGGACTGCATTGCTTTGATCATGGGAGAGTTAAAATCCAGAGGAATCTTAAACAGCCATACTCTGGCTTACCAGAGTCGAGTGGGGCCAGTTCAGTGGCTGAAACCATATACTGATGAAGTTCTAGTTGAACTAGGTCAACAGGGTGTAAAGAGCCTCCTGGCTGTTCCAGTAAGCTTTGTGAGCGAGCACATCGAGACCTTGGAAGAAATCGACATGGAGTACAAGGAGCTGGCTCTAGAATCGGGCATCGAGAACTGGGGAAGGGTTCCAGCTCTTGGATGCACCTCATCCTTCATCTCCGACCTTGCTGATGCAGTGGTCGAAGCCCTGCCCTCCGCTTCCGCTCTCGTGACGAAGAAGGTGGACGAGAGCGATTCCGACATGGACCTGATGCACTACCTGAGCAAGATGTTCTTCGGCTCCATCTTGGCGTTCGTCCTCCTATTGTCGCCAAGGCTGATTTCCGCTTTCCGGAACACCCTGTTGTAGGTGATGGTGGCTTCTTTTGTTTGGTTTTTTGCACTAGGGGTTTGGCTTGAGTAAGTAGAAAGGCAGGCTCGTGGGATGATAGTGAATAGTGATGGTTAAAGTTCCCCTTTTTTACAGAAGTAATATGCATGAAGTCATTGCAAGGTAGCTTAAGTGGTGGTTTTAAGCAAGGAGCCTCTAGGGGTAAATTGCCAGTCTGTACCAGTTTTCTTGTGCTGGTACAAGGCAAGCCTATCCTTTTTTTTCTTTTTTTTTCTTTTTGTTACATGAGCACATTGATAAAACATCATTGATATATTACTAATGCATAAACACCATAATTTTTCCTCGTTTNAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK068174             [TTGGTTGGGCAACGAATGCGAACCTACTTCTCCTAGTATACTGCTTTTACTTTAGCCATCGCCACCACCGCCATTCCTGGAACCCCCTTCCCTCTTCCTCCCTCGGATCTCTCCTCGCTCGCGCGTTCGCGCCGCCGCCTTCCCCCTTCCCCCGTTGATTGATTGGGAGGAGGATCAATGGAGTGCGTCCGCTCCGGCTCCGGGGTTCTTGATCCCAGGTGCTCTCCGCGGTTCCTGGGGAAGAAGGGTGGTTCGCTCACGTCATGTGGTAAAGCCACTTCTACAAATCTTGCCATTTGTACCAAACACGAGCAAAACTTGCATGGGAATGTTAAACCCTCACAGTTAGCAGCAAGT GGATCCTCTTATTCTGTTCACAGAAGTCCAGTGCTTAAGCAGAGACAGAATCTTTCTGCTAGGTCTACCTC TGCAGATGTATATACTACTTTTGATGAAAATGTCAGAGCTGTATCTTCACATGCTGCTGAAGAAAAGGTTGGAGTACTCTTATTAAACCTTGGTGGCCCAGAGACACTGG ATGATGTTCAGCCATTTCTATTCAACCTGTTTGCTGACCCAGATATCATCCGTTTGCCAAGGCTGTTCAGGTTTCTTCAAAGACCATTGGCCAAGCTTATCTCCACTTTTAGAGCTCCAAAGAGTAAGGAGGGGTACGCTTCAATCGGTGGAGGATCACCTTTGCGGAAAATTACTGATGAGCAGGCAAATGCTTTGAAGGTGGCACTGAAAAAGAAGAATTTGAATGCTAATATATATGTTGGAATGCGATACTGGTACCCTTTTACAGAAGAAGCCATTGATCAGATTAAGAAGGATAAGATTACAAAGCTTGTCGTTCTTCCACTGTACCCTCAATACTCCATATCGACAAGTGGATCAAGCATCCGTGTTCTCCAAAACATTGTCAAGGAGGATTCATATTTTGCTGGATTGCCAATTTCCATTATCGAATCATGGTACCAACGTGACGGTTATGTGAAATCAATGGCTGACTTAATTGAAAAGGAACTGTCAATTTTTTCCAATCCTGAAGAGGTTATGATATTCTTCAGTGCACATGGAGTACCACTTACCTATGTTACGGATGCTGGAGATCCTTACAGAGATCAGATGGAGGACTGCATTGCTTTGATCATGGGAGAGTTAAAATCCAGAGGAATCTTAAACAGCCATACTCTGGCTTACCAGAGTCGAGTGGGGCCAGTTCAGTGGCTGAAACCATATACTGATGAAGTTCTAGTTGAACTAGGTCAACAGGGTGTAAAGAGCCTCCTGGCTGTTCCAGTAAGCTTTGTGAGCGAGCACATCGAGACCTTGGAAGAAATCGACATGGAGTACAAGGAGCTGGCTCTAGAATCGGGCATCGAGAACTGGGGAAGGGTTCCAGCTCTTGGATGCACCTCATCCTTCATCTCCGACCTTGCTGATGCAGTGGTCGAAGCCCTGCCCTCCGCTTCCGCTCTCGTGACGAAGAAGGTGGACGAGAGCGATTCCGACATGGACCTGATGCACTACCTGAGCAAGATGTTCTTCGGCTCCATCTTGGCGTTCGTCCTCCTATTGTCGCCAAGGCTGATTTCCGCTTTCCGGAACACCCTGTTGTAGGTGATGGTGGCTTCTTTTGTTTGGTTTTTTGCACTAGGGGTTTGGCTTGAGTAAGTAGAAAGGCAGGCTCGTGGGATGATAGTGAATAGTGATGGTTAAAGTTCCCCTTTTTTACAGAAGTAATATGCATGAAGTCATTGCAAGGTAGCTTAAGTGGTGGTTTTAAGCAAGGAGCCTCTAGGGGTAAATTGCCAGTCTGTACCAGTTTTCTTGTGCTGGTACAAGGCAAGCCTATCCTTTTTTTTCTTTTTTTTTCTTTTTGTTACATGAGCACATTGATAAAACATCATTGATATATTACTAATGCATAAACACCAT                                       ]
[+] EMBL C28715               [                                                      GCCATCGCCACCACCGCCATTCCTGGAACCCCCTTCCCTCTTCCTCCCTCGGATCTCTCCTCGCTCGCGCGTTCG NCNGCCGCCTTCCCCCTTCCCCCGTTGATTGATTGGGAGGAGGATCAATGGAGTGCGTCCGCTCCGGCTCCGGGGTTCTTGATCCCAGGTGCTCTCCGCGGTTCCTGGGGAAGAAGGGTGGTTCGCTCACGTCATGTGGTAAAGCCACTTCTACAAATCTTGCCATTTGTACCAAACACGAGCAAAACTTGCATGGGAATGTTAAACCCTCACAGTTAGCAGCAAGTGGGATCCTCTTATTCTGTTCACAGAAGTCCAGTGCTTAAGCAGAGACAGAATCTTTCTGCTAGGTCTACCTCTTGCAGATGTATATACTACTTTTGATGAAAATGTCAGAGCTGTATCTTCACATGCTGCTGANGAAAAGGTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C26770               [                                                                                                  TCCCTCGGATCTCTCCTCGCTCGCGCGTTCG GACGCCGCCTTCCCCCTTCCCCCGTTGATTGATTGGGAGGAGGATCAATGGAGTACGTCCGCTCCGGCTCCGGGGTTCTTGATCCCAGGTGCTCTCCGCGGTTCCTGGGGAAGAAGGGTGGTTCGCTCACGTCATGTGGTAAAGCCACTTNTACAAATCTTGCCATTTGTACCAAACACGAGCAAAACTTGNATGGGAATGTTAAANCCTCACAGTTAGCAGCAAGT GGATCCTCTTATTCTGTTCACAGAAGTGCAGTGCTTAAGCAGATACAGAATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB652229             [                                                                                                                                                                                                                                                                                                                                                                                                   AGTGCTTCATTAAAGACAGAATCTTTCTGCTAGGTCTACCTC TGCAGATGTATATACTACTTTTGATGAAAATGTCATAGCTGTATCTTCACATGCTGCTGAAGAAAAGGATGGAGTACTCTTATTAAACCTTGGTGGCCCAAAGACACTGGCATGATGTTCAGCCATTTCTATTCAACCTGTTTGCTGACCCAGATATCGTCCGTTTGCCAAGGCTGTTCACGTTTCTTCAAAGACCATTGGCCAAGCTTATCTCCACTTTTAGAGCTCCAAAGAGTAAGGAGGGGTACGCTTCAATCGGTGGAGGATCACCTTTGCGGAAAATTACTGATGAGCAGGCAAATGCTTTGAAGGTGGCACTGAAAAAGAAGAATTTGAATGCTAATATATATGTTGGAATGCGATACTGGTACCCTTTTACAGAATAAGCCATTGATCATATTAAGAAGGATAAGATTACAAAGCTTGTCTTTCTTCCACTGTACCCTCAATACTCCATATCAACGAGTGGATCAAGCATCCGTGTTCTCCAAAACATTGTCAAGGAGGATTCATATTTTGCTGGATTGCCAATTTCCATTATCGAATCATGGTACCGACGTGACGGTTATGTGAAATCAATGGCTGACTTAATTGAAAAGGAACTGTCAATTTTTTCCAATCCTGAAGACGTTATGATATTCTTCAGTGCACATGGAGTACCACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSR29191A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACTTACCTATGTTACGGATGCTGGAGATCCTTACAGAGATCAGATGGAGGACTGCATTGCTTTGATCATGGGAGAGTTAAAATCCAGAGGAATCTTAAACAGCCATACTCTGGCTTACCAGAGTCGAGTGGGGCCAGTTCAGTGGCTGAAACCATATACTGATGAAGTTCTAGTTGAACTAGGTCAACAGGGTGTAAAGAGCCTCCTGGCTGTTCCAGTAAGCTTTGTGAGCGAGCACATCGAGACCTTGGAAGAAATCGACATGGAGTACAAGGAGCTGGCTCTAGAATCGGGCATCGAGAACTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSR29581A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACTTACCTATGTTACGGATGCTGGAGATCCTTACAGAGATCAGATGGAGGACTGCATTGCTTTGATCATGGGAGAGTTAAAATCCAGAGGAATCTTAAACAGCCATACTCTGGCTTACCAGAGTCGAGTGGGGCCAGTTCAGTGGCTGAAACCATATACTGATGAAGTTCTAGTTGAACTAGGTCAACAGGGTGTAAAGAGCCTCCTGGCTGTTCCAGTAAGCTTTGTGAGCGAGCACATCGAGACCTTGGAAGAAATCGACATGGAGTACAAGGAGCTGGCTCTAGAATCGGGCATCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB652230             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGCTGAAACCATATACTGATGAAGTTCTAGTTGAACTAGGTCAACAGGGTGTAAAGAGCCTCCTGGCTGTTCCAGTAAGCTTTGTGAGCGAGCACATCGAGACCTTGGAAGAAATCGACATGGAGTACAAGGAGCTGGCTCTAGAATCGGGCATCGAGAACTGGGGAAGGGTTCCAGCTCTTGGATGCACCTCATCCTTCATCTCCGACCTTGCTGATGCAGTGGTCGAAGCCCTGCCCTCCGCTTCCGCTCTCGTGACGAAGAAGGTGGACGAGAGCGATTCCGACATGGACCTGATGCACTACCTGAGCAAGATGTTCTTCGGCTCCATCTTGGCGTTCGTCCTCCTATTGTCGCCAAGGCTGATTTCCGCTTTCCGGAACACCCTGTTGTAGGTGATGGTGGCTTCTTTTGTTTGGTTTTTTGCACTAGGGGTTTGGCTTGAGTAAGTAGAAAGGCAGGCTCGTGGGATGATAGTGAATAGTGATGGTTAAAGTTCCCCTTTTTTACAGAAGTAATATGCATGAAGTCATTGCAAGGTAGCTTAAGTGGTGGTTTTAAGCAAGGAGCCTCTAGGGGTAAATTGCCAGTCTGTACCAGTTTTCTTGTGCTGGTACAAGGCAAGCCTATCCTTTTTTTTCTTTTTTTTTCTTTTTGTTACATGAGCACATTGATAAAACATCATTGATATATTAGGAATGCATAAACACCATAATTT                                  ]
[-] EMBL AU222749             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTATTGTCGCCAAGGNTGATTTCCGCTTTCCGGAACNCCCTGTTGTAGGTGATGGTGGCTTNTTTTGTTTGGTTTTTTGCNCTAGGGGTTTGGCTTGAGTAAGTANAAAGGCAGGCTCGTGGGATGATAGTGAATAGTGATGGTTAAAGTTCCCCTTTTTTACAGAAGTAATATGCATGAAGTCATTGCAAGGTAGCTTAAGTGGTGGTTTTAAGCAAGGAGCCTNTAGGGGTAAATTGCCAGTCTGNACCAGTTTTNTTGTGCTGGNACAAGGCAAGCCTATCCNTTTTTTTCTTTTTTTTTCTTTTTGNTACATGAGCCCATTGATAAAACATCATTGATATATTACTAATGCATAAACNCCATAATTTTTCCTCGTTTNAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11841#0 TTGGTTGGGCAACGAATGCGAACCTACTTCTCCTAGTATACTGCTTTTACTTTAGCCATC GCCACCACCGCCATTCCTGGAACCCCCTTCCCTCTTCCTCCCTCGGATCTCTCCTCGCTC GCGCGTTCGGCCGCCGCCTTCCCCCTTCCCCCGTTGATTGATTGGGAGGAGGATCAATGG AGTGCGTCCGCTCCGGCTCCGGGGTTCTTGATCCCAGGTGCTCTCCGCGGTTCCTGGGGA AGAAGGGTGGTTCGCTCACGTCATGTGGTAAAGCCACTTCTACAAATCTTGCCATTTGTA CCAAACACGAGCAAAACTTGCATGGGAATGTTAAACCCTCACAGTTAGCAGCAAGTGGAT CCTCTTATTCTGTTCACAGAAGTCCAGTGCTTAAGCAGAGACAGAATCTTTCTGCTAGGT CTACCTCTGCAGATGTATATACTACTTTTGATGAAAATGTCAGAGCTGTATCTTCACATG CTGCTGAAGAAAAGGTTGGAGTACTCTTATTAAACCTTGGTGGCCCAGAGACACTGGATG ATGTTCAGCCATTTCTATTCAACCTGTTTGCTGACCCAGATATCATCCGTTTGCCAAGGC TGTTCAGGTTTCTTCAAAGACCATTGGCCAAGCTTATCTCCACTTTTAGAGCTCCAAAGA GTAAGGAGGGGTACGCTTCAATCGGTGGAGGATCACCTTTGCGGAAAATTACTGATGAGC AGGCAAATGCTTTGAAGGTGGCACTGAAAAAGAAGAATTTGAATGCTAATATATATGTTG GAATGCGATACTGGTACCCTTTTACAGAAGAAGCCATTGATCAGATTAAGAAGGATAAGA TTACAAAGCTTGTCGTTCTTCCACTGTACCCTCAATACTCCATATCGACAAGTGGATCAA GCATCCGTGTTCTCCAAAACATTGTCAAGGAGGATTCATATTTTGCTGGATTGCCAATTT CCATTATCGAATCATGGTACCAACGTGACGGTTATGTGAAATCAATGGCTGACTTAATTG AAAAGGAACTGTCAATTTTTTCCAATCCTGAAGAGGTTATGATATTCTTCAGTGCACATG GAGTACCACTTACCTATGTTACGGATGCTGGAGATCCTTACAGAGATCAGATGGAGGACT GCATTGCTTTGATCATGGGAGAGTTAAAATCCAGAGGAATCTTAAACAGCCATACTCTGG CTTACCAGAGTCGAGTGGGGCCAGTTCAGTGGCTGAAACCATATACTGATGAAGTTCTAG TTGAACTAGGTCAACAGGGTGTAAAGAGCCTCCTGGCTGTTCCAGTAAGCTTTGTGAGCG AGCACATCGAGACCTTGGAAGAAATCGACATGGAGTACAAGGAGCTGGCTCTAGAATCGG GCATCGAGAACTGGGGAAGGGTTCCAGCTCTTGGATGCACCTCATCCTTCATCTCCGACC TTGCTGATGCAGTGGTCGAAGCCCTGCCCTCCGCTTCCGCTCTCGTGACGAAGAAGGTGG ACGAGAGCGATTCCGACATGGACCTGATGCACTACCTGAGCAAGATGTTCTTCGGCTCCA TCTTGGCGTTCGTCCTCCTATTGTCGCCAAGGCTGATTTCCGCTTTCCGGAACACCCTGT TGTAGGTGATGGTGGCTTCTTTTGTTTGGTTTTTTGCACTAGGGGTTTGGCTTGAGTAAG TAGAAAGGCAGGCTCGTGGGATGATAGTGAATAGTGATGGTTAAAGTTCCCCTTTTTTAC AGAAGTAATATGCATGAAGTCATTGCAAGGTAGCTTAAGTGGTGGTTTTAAGCAAGGAGC CTCTAGGGGTAAATTGCCAGTCTGTACCAGTTTTCTTGTGCTGGTACAAGGCAAGCCTAT CCTTTTTTTTCTTTTTTTTTCTTTTTGTTACATGAGCACATTGATAAAACATCATTGATA TATTACTAATGCATAAACACCATAATTTTTCCTCGTTTNAAAAAAAAAAAAAAAAAAAAA AA



consensusID : consensus_11841#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 514
fasta sequence
                              [ATTCCGANATGGCCTTGATGCACTNCTTGAGCAAGATGTTCTTCGGCTCCATCTTGGCGTTCGCCCTCCTATTGTCNCCAAGGCTGATTTCCGCTTTCCGGAACACCCTGTTGTAGGTGATGGTGGCTTCTTTTGTTTGGTTTTTTGCACTAGGGGTTTGGCTTGAGTAAGTAGAAAGGCAGGCTCGTGGGATGATAGTGAATAGTGATGGTTAAAGTTCCCCTTTTTTACAGAAGTAATATGCATGAAGTCATTGCAAGGTAGCTTAAGTGGTGGTTTTAAGCAAGGAGCCTCTAGGGGTAAATTGCCAGTCTGTACCAGTTTTCTTGTGCTGGTACAAGGCAAGCCTATCCTTTTTCTTGTGCTGGTACAAGGCAAGCCTATCCTTTTTTTTCTTTTTTTTTCTTTTTGTTACATGAGCACATTGATAAAACATCATTGATATATTACTAATGCATAAACACCATAATTTTTCCTCGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU088569             [ATTCCGANATGGCCTTGATGCACTNCTTGAGCAAGATGTTCTTCGGCTCCATCTTGGCGTTCGCCCTCCTATTGTCNCCAAGGCTGATTTCCGCTTTCCGGAACACCCTGTTGTAGGTGATGGTGGCTTCTTTTGTTTGGTTTTTTGCACTAGGGGTTTGGCTTGAGTAAGTAGAAAGGCAGGCTCGTGGGATGATAGTGAATAGTGATGGTTAAAGTTCCCCTTTTTTACAGAAGTAATATGCATGAAGTCATTGCAAGGTAGCTTAAGTGGTGGTTTTAAGCAAGGAGCCTCTAGGGGTAAATTGCCAGTCTGTACCAGTTTTCTTGTGCTGGTACAAGGCAAGCCTATCCTTTTTCTTGTGCTGGTACAAGGCAAGCCTATCCTTTTTTTTCTTTTTTTTTCTTTTTGTTACATGAGCACATTGATAAAACATCATTGATATATTACTAATGCATAAACACCATAATTTTTCCTCGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11841#1 ATTCCGANATGGCCTTGATGCACTNCTTGAGCAAGATGTTCTTCGGCTCCATCTTGGCGT TCGCCCTCCTATTGTCNCCAAGGCTGATTTCCGCTTTCCGGAACACCCTGTTGTAGGTGA TGGTGGCTTCTTTTGTTTGGTTTTTTGCACTAGGGGTTTGGCTTGAGTAAGTAGAAAGGC AGGCTCGTGGGATGATAGTGAATAGTGATGGTTAAAGTTCCCCTTTTTTACAGAAGTAAT ATGCATGAAGTCATTGCAAGGTAGCTTAAGTGGTGGTTTTAAGCAAGGAGCCTCTAGGGG TAAATTGCCAGTCTGTACCAGTTTTCTTGTGCTGGTACAAGGCAAGCCTATCCTTTTTCT TGTGCTGGTACAAGGCAAGCCTATCCTTTTTTTTCTTTTTTTTTCTTTTTGTTACATGAG CACATTGATAAAACATCATTGATATATTACTAATGCATAAACACCATAATTTTTCCTCGT TTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11841#0      TTGGTTGGGCAACGAATGCGAACCTACTTCTCCTAGTATACTGCTTTTACTTTAGCCATC 60
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      GCCACCACCGCCATTCCTGGAACCCCCTTCCCTCTTCCTCCCTCGGATCTCTCCTCGCTC 120
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      GCGCGTTCGGCCGCCGCCTTCCCCCTTCCCCCGTTGATTGATTGGGAGGAGGATCAATGG 180
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      AGTGCGTCCGCTCCGGCTCCGGGGTTCTTGATCCCAGGTGCTCTCCGCGGTTCCTGGGGA 240
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      AGAAGGGTGGTTCGCTCACGTCATGTGGTAAAGCCACTTCTACAAATCTTGCCATTTGTA 300
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      CCAAACACGAGCAAAACTTGCATGGGAATGTTAAACCCTCACAGTTAGCAGCAAGTGGAT 360
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      CCTCTTATTCTGTTCACAGAAGTCCAGTGCTTAAGCAGAGACAGAATCTTTCTGCTAGGT 420
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      CTACCTCTGCAGATGTATATACTACTTTTGATGAAAATGTCAGAGCTGTATCTTCACATG 480
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      CTGCTGAAGAAAAGGTTGGAGTACTCTTATTAAACCTTGGTGGCCCAGAGACACTGGATG 540
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      ATGTTCAGCCATTTCTATTCAACCTGTTTGCTGACCCAGATATCATCCGTTTGCCAAGGC 600
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      TGTTCAGGTTTCTTCAAAGACCATTGGCCAAGCTTATCTCCACTTTTAGAGCTCCAAAGA 660
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      GTAAGGAGGGGTACGCTTCAATCGGTGGAGGATCACCTTTGCGGAAAATTACTGATGAGC 720
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      AGGCAAATGCTTTGAAGGTGGCACTGAAAAAGAAGAATTTGAATGCTAATATATATGTTG 780
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      GAATGCGATACTGGTACCCTTTTACAGAAGAAGCCATTGATCAGATTAAGAAGGATAAGA 840
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      TTACAAAGCTTGTCGTTCTTCCACTGTACCCTCAATACTCCATATCGACAAGTGGATCAA 900
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      GCATCCGTGTTCTCCAAAACATTGTCAAGGAGGATTCATATTTTGCTGGATTGCCAATTT 960
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      CCATTATCGAATCATGGTACCAACGTGACGGTTATGTGAAATCAATGGCTGACTTAATTG 1020
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      AAAAGGAACTGTCAATTTTTTCCAATCCTGAAGAGGTTATGATATTCTTCAGTGCACATG 1080
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      GAGTACCACTTACCTATGTTACGGATGCTGGAGATCCTTACAGAGATCAGATGGAGGACT 1140
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      GCATTGCTTTGATCATGGGAGAGTTAAAATCCAGAGGAATCTTAAACAGCCATACTCTGG 1200
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      CTTACCAGAGTCGAGTGGGGCCAGTTCAGTGGCTGAAACCATATACTGATGAAGTTCTAG 1260
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      TTGAACTAGGTCAACAGGGTGTAAAGAGCCTCCTGGCTGTTCCAGTAAGCTTTGTGAGCG 1320
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      AGCACATCGAGACCTTGGAAGAAATCGACATGGAGTACAAGGAGCTGGCTCTAGAATCGG 1380
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      GCATCGAGAACTGGGGAAGGGTTCCAGCTCTTGGATGCACCTCATCCTTCATCTCCGACC 1440
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      TTGCTGATGCAGTGGTCGAAGCCCTGCCCTCCGCTTCCGCTCTCGTGACGAAGAAGGTGG 1500
consensus_11841#1      ------------------------------------------------------------
                                                                                   

consensus_11841#0      ACGAGAGCGATTCCGACATGGACCTGATGCACTACCTGAGCAAGATGTTCTTCGGCTCCA 1560
consensus_11841#1      ---------ATTCCGANATGGCCTTGATGCACTNCTTGAGCAAGATGTTCTTCGGCTCCA 51
                                ******* **** * ********* * ************************

consensus_11841#0      TCTTGGCGTTCGTCCTCCTATTGTCGCCAAGGCTGATTTCCGCTTTCCGGAACACCCTGT 1620
consensus_11841#1      TCTTGGCGTTCGCCCTCCTATTGTCNCCAAGGCTGATTTCCGCTTTCCGGAACACCCTGT 111
                       ************ ************ **********************************

consensus_11841#0      TGTAGGTGATGGTGGCTTCTTTTGTTTGGTTTTTTGCACTAGGGGTTTGGCTTGAGTAAG 1680
consensus_11841#1      TGTAGGTGATGGTGGCTTCTTTTGTTTGGTTTTTTGCACTAGGGGTTTGGCTTGAGTAAG 171
                       ************************************************************

consensus_11841#0      TAGAAAGGCAGGCTCGTGGGATGATAGTGAATAGTGATGGTTAAAGTTCCCCTTTTTTAC 1740
consensus_11841#1      TAGAAAGGCAGGCTCGTGGGATGATAGTGAATAGTGATGGTTAAAGTTCCCCTTTTTTAC 231
                       ************************************************************

consensus_11841#0      AGAAGTAATATGCATGAAGTCATTGCAAGGTAGCTTAAGTGGTGGTTTTAAGCAAGGAGC 1800
consensus_11841#1      AGAAGTAATATGCATGAAGTCATTGCAAGGTAGCTTAAGTGGTGGTTTTAAGCAAGGAGC 291
                       ************************************************************

consensus_11841#0      CTCTAGGGGTAAATTGCCAGTCTGTACCAGTTTTCTTGTGCTGGTACAAGGCAAGCCTAT 1860
consensus_11841#1      CTCTAGGGGTAAATTGCCAGTCTGTACCAGTTTTCTTGTGCTGGTACAAGGCAAGCCTAT 351
                       ************************************************************

consensus_11841#0      CCTTTTT---------------------------------TTTCTTTTTTTTTCTTTTTG 1887
consensus_11841#1      CCTTTTTCTTGTGCTGGTACAAGGCAAGCCTATCCTTTTTTTTCTTTTTTTTTCTTTTTG 411
                       *******                                 ********************

consensus_11841#0      TTACATGAGCACATTGATAAAACATCATTGATATATTACTAATGCATAAACACCATAATT 1947
consensus_11841#1      TTACATGAGCACATTGATAAAACATCATTGATATATTACTAATGCATAAACACCATAATT 471
                       ************************************************************

consensus_11841#0      TTTCCTCGTTTNAAAAAAAAAAAAAAAAAAAAAAA-------- 1982
consensus_11841#1      TTTCCTCGTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 514
                       *********** ***********************        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)