These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11864#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2040 fasta sequence [CTACGCCTACGCGCCCCCTCCCATGGCGCCGCCTCCGCCGCTCGCCGCGCTCCGCCCCGCGCCATTCCCTCTCCCTCGCCTCCTCCCCTGCCCCGCCTCCGCCGCCGCCCGCCGCGGCGCCGTCGCCTTCTCGCTGCAGACCAACGTGCGGCTCCTCAAGCCCAACCGCCGCTCCCGGCGATCCCGGTACCCCTACTACGACCACGACGAGGACGAGGACGACGATGAGGCGGAGTTCGAGTTTGAGGAAGGGGAGGAGGAGGAGGAAGACGGCTACGAGACCGATGATGATCTATCAGGTTTGGAGTATCCTGGTGTACTTTATTCAAACAATCCTCGTGCTCCAATCAAGAAACCAGGCCGGGAAAAACCAGCGCTGAAACAAAACTGGGAAGGAAGACAACCTAAAACACGAGACAGATGTGACACTTCAAAAAAAGTCGATGCTCTGCATGCCAAGAGTAAAGCTAGCAGATCAACTGGTCTTGTGGACATAGATAATGAAGTAGAGTTGAAAAATGAAAGTATCTCTAGAAGCTTGTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTACTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGCCTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGGTGTTAAAAGCAAGGATATGAAGAGGATGCTTGTTAGACAACCACAAATTTTGGAATACACTCTCAGCAACCTGAAGTCTCATGTTGCATTTCTGGTGGGCATAGGTGTTCCTAGTGCACGGATAGGTCAAATTATTTCTGCTGCTCCATCATTTTTCTCTTACAGTGTTGAGCAGTCTCTGAAGCCAACCATAAGGTATCTGATTGAGGAAGTGGGCATTGAGGAGAGTGATGTGGGCAAAGTAGTGCAACTAAGCCCACAGATTCTGGTCCAGCGAATCGATAGTGCATGGAAATCTCGATTTCTTTTTCTATCAAAAGAATTAGGGGCTCCAAAAGATAACATTGTTAAAATGGTCACAAAACACCCACAGCTGCTTCATTACAGTATTGAGGATGGAATATTGCCTCGAATCAATTTCCTTAGAAGCATTGGCATGAGAGATACTGATGTTCTCAAGGTATTGACGAGTCTGACTCAGGTGTTGTCTTTGTCCTTGGAGGAAAATCTCAAACCAAAGTATCTTTACTTGGTCAATGACCTTAAAAACGATGTTCAATCCTTGACAAAGTATCCTATGTACTTGAGCTTGTCCCTTGACCAGAGAATCCGTCCCCGTCACCGTTTTCTTGTTTCATTGAAGAAAGCTCCTAAGGGTCCATTCCCTCTTAGCTCCTTTGTGCCTACAGATGAGCGATTTTGCAAGAGGTGGGCTGGGACTAGCTTAGAAAAGTATCATACATTTCGTCAGAGCATGCTGCTCAAAGGTTTTTCAGAGAAGACTGGAAGGAAAACATTAACATCGA-GGCGGTAGATACTTCATGATTGAGAAGTAGGTTGTTTTTGAACCTATGCCACGCTGAAAAGGCCTGGGTTGCTGTGCTGGTATTCAATCATC-AGCATTCGGCACACATATATCAATATCACAGATACATCACTAACTACAGTTTAGACTTCCTTTTTTTTTTACTCCTATTACAACAAGGTGTAAATTCTTCATCTGATTCCTCCAGTCGAAAAACAAATGGATGTTCCAGGAGTCAATCTAAGGATGAAAAGGGATGCACCAGAATGGTTGATGTGGCATTTTGTTGTCTACTGCCACGGTGACATCACCTTGACCATTAGCTAATGTTAAATATGTCTAGCACAACAAACTAACCATCTATTAGGGATGTATTAGGCAGCATCCTACGTTGCCGTAAGTCTGTAGCGTCGTTAAGCACGATATTTTATTTTCCACGGTTGTAAATGATAGAAATTCTATCACCAGTTCGATCTGTACTTTGTGCGCTTTTCTGGTTTGTTATGTTGGAAAAT] [+] EMBL AK071674 [CTACGCCTACGCGCCCCCTCCCATGGCGCCGCCTCCGCCGCTCGCCGCGCTCCGCCCCGCGCCATTCCCTCTCCCTCGCCTCCTCCCCTGCCCCGCCTCCGCCGCCGCCCGCCGCGGCGCCGTCGCCTTCTCGCTGCAGACCAACGTGCGGCTCCTCAAGCCCAACCGCCGCTCCCGGCGATCCCGGTACCCCTACTACGACCACGACGAGGACGAGGACGACGATGAGGCGGAGTTCGAGTTTGAGGAAGGGGAGGAGGAGGAGGAAGACGGCTACGAGACCGATGATGATCTATCAGGTTTGGAGTATCCTGGTGTACTTTATTCAAACAATCCTCGTGCTCCAATCAAGAAACCAGGCCGGGAAAAACCAGCGCTGAAACAAAACTGGGAAGGAAGACAACCTAAAACACGAGACAGATGTGACACTTCAAAAAAAGTCGATGCTCTGCATGCCAAGAGTAAAGCTAGCAGATCAACTGGTCTTGTGGACATAGATAATGAAGTAGAGTTGAAAAATGAAAGTATCTCTAGAAGCTTGTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTACTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGCCTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGGTGTTAAAAGCAAGGATATGAAGAGGATGCTTGTTAGACAACCACAAATTTTGGAATACACTCTCAGCAACCTGAAGTCTCATGTTGCATTTCTGGTGGGCATAGGTGTTCCTAGTGCACGGATAGGTCAAATTATTTCTGCTGCTCCATCATTTTTCTCTTACAGTGTTGAGCAGTCTCTGAAGCCAACCATAAGGTATCTGATTGAGGAAGTGGGCATTGAGGAGAGTGATGTGGGCAAAGTAGTGCAACTAAGCCCACAGATTCTGGTCCAGCGAATCGATAGTGCATGGAAATCTCGATTTCTTTTTCTATCAAAAGAATTAGGGGCTCCAAAAGATAACATTGTTAAAATGGTCACAAAACACCCACAGCTGCTTCATTACAGTATTGAGGATGGAATATTGCCTCGAATCAATTTCCTTAGAAGCATTGGCATGAGAGATACTGATGTTCTCAAGGTATTGACGAGTCTGACTCAGGTGTTGTCTTTGTCCTTGGAGGAAAATCTCAAACCAAAGTATCTTTACTTGGTCAATGACCTTAAAAACGATGTTCAATCCTTGACAAAGTATCCTATGTACTTGAGCTTGTCCCTTGACCAGAGAATCCGTCCCCGTCACCGTTTTCTTGTTTCATTGAAGAAAGCTCCTAAGGGTCCATTCCCTCTTAGCTCCTTTGTGCCTACAGATGAGCGATTTTGCAAGAGGTGGGCTGGGACTAGCTTAGAAAAGTATCATACATTTCGTCAGAGCATGCTGCTCAAAGGTTTTTCAGAGAAGACTGGAAGGAAAACATTAACATCGA GGCGGTAGATACTTCATGATTGAGAAGTAGGTTGTTTTTGAACCTATGCCACGCTGAAAAGGCCTGGGTTGCTGTGCTGGTATTCAATCATC AGCATTCGGCACACATATATCAATATCACAGATACATCACTAACTACAGTTTAGACTTCCTTTTTTTTTTACTCCTATTACAACAAGGTGTAAATTCTTCATCTGATTCCTCCAGTCGAAAAACAAATGGATGTTCCAGGAGTCAATCTAAGGATGAAAAGGGATGCACCAGAATGGTTGATGTGGCATTTTGTTGTCTACTGCCACGGTGACATCACCTTGACCATTAGCTAATGTTAAATATGTCTAGCACAACAAACTAACCATCTATTAGGGATGTATTAGGCAGCATCCTACGTTGCCGTAAGTCTGTAGCGTCGTTAAGCACGATATTTTATTTTCCACGGTTGTAAATGATAGAAATTCTATCACCAGTTCGATCTGTACTTTGTGCGCTTTTCTGGTTTGTTATGTTGGAAAAT] [+] EMBL CB622181 [ TCCCCTGCCCCGCCTCCGCCGCCGCCCGCCGCGGTGCCGTCGCCTTCTCGCTGCAGACCAACGTGCGGCTCCTCAAGCCCAACCGCCGCTCCCGGCGATCCCGGTACCCCTACTACGACCACGACGAGGACGAGGACGACGATGAGGCGGAGTTCGAGTTTGAGGAAGGGGAGGAGGAGGAGGAAGACGGCTACGAGACCGATGATGATCTATCAGGTTTGGAGTATCCTGGTGTACTTTATTCAAACAATCCTCGTGCTCCAATCAAGAAACCAGGCCGGGAAAAACCAGCGGTGAAACAAAACTGGGAAGGAAGACAACCTAAAACACGAGACAGATGTGACACTTCAAAAAAAGTCGATGCTCTGCATGCCAAGAGTAAAGCTAGCAGATCAACTGGTCTTGTGGACATAGATAATGAAGTAGAGTTGAAAAATGAAAGTATCTCTAGAAGCTTGTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTACTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGCCTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGGTGTTAAAAGCAAGGATATGAAGAGGATGCTTGTTAGACAACCACAAATTTTGGAATACACTCTCAGCAACCTGAAGTCTCATGTTGCATTTCTGGTGGGCATAGGTGTTCCTAGTGCACGGATAGGTCAAATTATTTCTGCTGCTC ] [+] EMBL AU031298 [ AGGTATTGACGAGTCTGACTCAGGTGTTGTCTTTGTCCTTGGAGGAAAATCTCAAACCAAAGTATCTTTACTTGGTCAATGACCTTAAAAACGATGTTCAATCCTTGACAAAGTATCCTATGTACTTGAGCTTGTCCCTTGACCAGAGAATCCGTCCCCGTCACCGTTTTCTTGTTTCATTGAAGAAAGCTCCTAAGGGTCCATTCCCTCTTAGCTCCTTTGTGCCTACAGATGAGCGATTTTGCAAGAGGTGGGCTGGGACTAGCTTAGAAAAGTATCATACATTTCGTCAGAGCATGCTGCTCAAAGGTTTTTCAGAGAAGACTGGAAGGAAAACATTAACATCGAGGGCGGTAGATACTTCATGATTGAGAAGTAGGTTGTTTTTGAACCTATGCCACGCTGAAAAGGCCTGGGTTGCTGTGCTGGTATNCAATCATCNAGCATTCGGNACACATATATCAATATCA ] [+] EMBL AU077728 [ TATTGACGAGTCTGACTCAGGTGTTGTCTTTGTCCTTGGAGGAAAATCTCAAACCAAAGTATCTTTACTTGGTCAATGACCTTAAAAACGATGTTCAATCCTTGACAAAGTATCCTATGTACTTGAGCTTGTCCCTTGACCAGAGAATCCGTCCCCGTCANCGTTTTCTTGTTTCATTGAAGAAAGCTCCTAAGGGTCCATTCCCTCTTAGCTCCTTTGTGCCTACAGATGAGCGATTTTGCAAGAGGTGGGCTGGGACTAGCTTAGAAAAGTATCATACATTTCGTCAGAGCATGCTGCTCAAAGGTTTTTCAGAGAAGACTGGAAGGAAAACATTAACATCGA GGCGGTAGATACTTCATGTTTGAGAAGTAGGTTGTNTTTGAACCTATGnc ] consensusID : consensus_11864#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 836 fasta sequence [GNACAAGGGGGAAGTAGAGTTGAAAAATGAAAGTATCTCTAGAAGCTTGTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTACTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGCCTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGGTGTTAAAAGCAAGGATATGAAGAGGATGCTTGTTAGACAACCACAAATTTTGGAATACACTCTCAGCAACCTGAAGTCTCATGTTGCATTTCTGGTGGGCATAGGTGTTCCTAGTGCACGGATAGGTCAAATTATTTCTGCTGCTCCATCATTTTTCTCTTACAGTGTTGAGCAGTCTCTGAAGCCAACCATAAGGTATCTGATTGAGGAAGTGGGCATTGAGGAGAGTGATGTGGGCAAAGTAGTGCAATTAAGCCCACAGATTCTGGTCCAGCGAATCGATAGTGCATGGAAATCTCGATTTCTTTTTCTATCAAAAGAATTANGGGCTCCAAAAGATAACATTGNTAAAATGGTCACAAAACACCCACAGCTGCTTCATTACAGTATTGAGGATGGAATATTGGCCTCGAATCAATTTCCTTANAAGCATTGGCATGAGAGATCCTGATGGTCTCAAGGATTGACGAGTCTGACTCAAGGGGTGGCNTTTGGCCTTGGAGGNAAATCTCAAACCAAAGNATCNTTTCTTTGGCCAANGACCTTAAAAAGATGNTCAATCCTTGCCAAGATNCCATGGNCTTGGGCTTGGCCCTTGACCTGGNAAT] [+] EMBL CA767166 [GNACAAGGGGGAAGTAGAGTTGAAAAATGAAAGTATCTCTAGAAGCTTGTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTACTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGCCTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGGTGTTAAAAGCAAGGATATGAAGAGGATGCTTGTTAGACAACCACAAATTTTGGAATACACTCTCAGCAACCTGAAGTCTCATGTTGCATTTCTGGTGGGCATAGGTGTTCCTAGTGCACGGATAGGTCAAATTATTTCTGCTGCTCCATCATTTTTCTCTTACAGTGTTGAGCAGTCTCTGAAGCCAACCATAAGGTATCTGATTGAGGAAGTGGGCATTGAGGAGAGTGATGTGGGCAAAGTAGTGCAATTAAGCCCACAGATTCTGGTCCAGCGAATCGATAGTGCATGGAAATCTCGATTTCTTTTTCTATCAAAAGAATTANGGGCTCCAAAAGATAACATTGNTAAAATGGTCACAAAACACCCACAGCTGCTTCATTACAGTATTGAGGATGGAATATTGGCCTCGAATCAATTTCCTTANAAGCATTGGCATGAGAGATCCTGATGGTCTCAAGGATTGACGAGTCTGACTCAAGGGGTGGCNTTTGGCCTTGGAGGNAAATCTCAAACCAAAGNATCNTTTCTTTGGCCAANGACCTTAAAAAGATGNTCAATCCTTGCCAAGATNCCATGGNCTTGGGCTTGGCCCTTGACCTGGNAAT] consensusID : consensus_11864#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 720 fasta sequence [CGCCGCCTCCGCCGCTCGCCGCGCTCCGCCCCGCGCCATTCCCTCTCCCTCGCCTCCTCCCCTGCCCCGCCTCCGCCGCCGCCCGCCGCGGCGCCGTCGCCTTCTCGCTGCAGACCAACGTGCGGCTCCTCAAGCCCAACCGCCGCTCCCGGCGATCCCGGTACCCCTACTACGACCACGACGAGGACGAGGACGACGATGAGGCGGAGTTCGAGTTTGAGGAAGGGGAGGAGGAGGAGGAAGACGGCTACGAGACCGATGATGATCTATCAGGTTTGGAGTATCCTGGTGTACTTTATTCAAACAATCCTCGTGCTCCAATCAAGAAACCAGGCCGGGAAAAACCAGCGCTGAAACAAAACTGGGAAGGAAGACAACCTAAAACACGAGACAGATGTGACACTTCAAAAAAAGTCGATGCTCTGCATGCCAAGAGTAAAGCTAGCAGATCAACTGGTCTTGTGGACATAGATAATGAAGTAGAAGTAGACTACTAAGTTGAAAAATGAAAGTATCTCTAGAAGCTTGTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTACTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGCCTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGGTGTTAAAAGCAAG] [+] EMBL CB685994 [CGCCGCCTCCGCCGCTCGCCGCGCTCCGCCCCGCGCCATTCCCTCTCCCTCGCCTCCTCCCCTGCCCCGCCTCCGCCGCCGCCCGCCGCGGCGCCGTCGCCTTCTCGCTGCAGACCAACGTGCGGCTCCTCAAGCCCAACCGCCGCTCCCGGCGATCCCGGTACCCCTACTACGACCACGACGAGGACGAGGACGACGATGAGGCGGAGTTCGAGTTTGAGGAAGGGGAGGAGGAGGAGGAAGACGGCTACGAGACCGATGATGATCTATCAGGTTTGGAGTATCCTGGTGTACTTTATTCAAACAATCCTCGTGCTCCAATCAAGAAACCAGGCCGGGAAAAACCAGCGCTGAAACAAAACTGGGAAGGAAGACAACCTAAAACACGAGACAGATGTGACACTTCAAAAAAAGTCGATGCTCTGCATGCCAAGAGTAAAGCTAGCAGATCAACTGGTCTTGTGGACATAGATAATGAAGTAGAAGTAGACTACTAAGTTGAAAAATGAAAGTATCTCTAGAAGCTTGTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTACTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGCCTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGGTGTTAAAAGCAAG] consensusID : consensus_11864#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 698 fasta sequence [GGATTCGGCACGAGATCCGCCCGTCACCGTTTTCTTGTTTCATTGAANAAAGCTCCTAAGGGTCCATTCCCTCTTAGCTCCTTTGTGCCTACAGATGAGCGATTTTGCAANANGTGGGCTGGGACTAGCTT--AGAAAAGTATCATACATTT-CGTCAGAGCATGCTGCTCAAAGGTTTTTCAG-AGAAGACTGGAAGGAAAACATTAACATCGAGGCGGTAGATACTTCATGATT-GAGAAGTAGGTTGTTTTTGAACCTATGCCACGCTGAAAAGGCCTGGGTTGCTGTGCTGGTATTCAATCATCAGCATTCGGCACACATATATCAATAT-CACAGATACATCACTAACTACAGTTTAGACTTCC-TTTTTTTTTACTCCTATTACAACAAGGTGTAAATTCTTCATCTGATTCCTCCAGTCGAAAAACAAATGGATGTTCCAGGAGTCAATCTAAGGATGAAAAGGGATGCACCAGAATGGTTGATGTGGCATTTTGTTGTCTACTGCCA-CGGTGACATCACCTTGACCATTAGCTAATGTTAAATATGTCTAGCACAACAAACTAACCATCTATTAGGGATGTATTAGGCAGCATCCTACGTTGCCGTAAGTCTGTAGCGTCGTTAAGCACGATATTTTATTTTCCACGGTTGTAAATGATAGAAATTCTATCACCNGTTNGATCAAAAAAAAAAAAAA] [+] EMBL BE228250 [GGATTCGGCACGAGATCCGCCCGTCACCGTTTTCTTGTTTCATTGAANAAAGCTCCTAAGGGTCCATTCCCTCTTAGCTCCTTTGTGCCTACAGATGAGCGATTTTGCAANANGTGGGCTGGGACTAGCTT AGAAAAGTATCATACATTT CGTCAGAGCATGCTGCTCAAAGGTTTTTCAG AGAAGACTGGAAGGAAAACATTAACATCGAGGCGGTAGATACTTCATGATT GAGAAGTAGGTTGTTTTTGAACCTATGCCACGCTGAAAAGGCCTGGGTTGCTGTGCTGGTATTCAATCATCAGCATTCGGCACACATNTATCAATAT CACAGATACATCACTAACTACAGTTTAGACTTCCTTTTTTTTTTACTCCTATTACAACAAGGTGTNAATTCTTCATCTGATTCCTCCAGTCGAAAAACAAATGGATGTTCCAGGAGTCAATCTAAGGATGAAAANGGATGCACCNGAATGGTTGATGTGGCATTTTGTTGTCTACTGCCACCGGTGAAATCNCCCTGAACAATANCTAATGTTAAATTTG ] [+] EMBL AU031299 [ ACTAGCTTTNGGAAAGGTATCATACATTTCCNTCAGAGCATGCTGCTCAAAGGTTTTTCCGNGGAAGACTGGAAGGAAAACATTAACATCGAGNCGGTAGATACTTC TGATTGGAGAAGTAGGTTGTTTTTGAACCTATGCCACGCTGAAAAGGCCTGGGTTGCTGTGCTGGTATTCAATCATCAGCATTCGGCACACATATATCAATATCCACAGATACATCACTAACTACAGTTTAGACTTCC TTTTTTTTTACTCCTATTACAACAAGGTGTAAATTCTTCATCTGATTCCTCCNGTCGAAAAACAAATGGATGTTCCAGGAGTCAATCTAAGGATGAAAAGGGATGCACCAGAATGGTTGATGTGGCATTTTGTTGTCTACTGCCA CGGTGACATCACCTTGACCATTAGCTAATGTTAAATATGTCTAGCACAACAAACTAACCATCTATTAGGGATGTATTAGGCAGCATCCTACGTTGCCGTAAGTCTGTAGCGTCGTTAAGCACGATATTTTATTTTCCACGGTTGTAAATGATAGAAATTCTATCACCNGTTNGATCAAAAAAAAAAAAAA] [+] EMBL AU077729 [ AACCTATGCCACGCTGAAAAGGCCTGGGTTGCTGTGCTGGTATTCAATCATCAGCATTCGGCACACATATATCAATAT CACAGATACATCACTAACTACAGTTTAGACTTCC TTTTTTTTTACTCCTATTACAACAAGGTGTAAATTCTTCATCTGATTCCTCCAGTCGAAAAACAAATGGATGTTCCAGGAGTCAATCTAAGGATGAAAAGGGATGCACCAGAATGGTTGATGTGGCATTTTGTTGTCTACTGCCA CGGTGACATCACCTTGACCATTAGCTAATGTTAAATATGTCTAGCACAACAAACTAACCATCTATTAGGGATGTATTAGGCAGCATCCTACGTTGCCGTAAGTCTGTAGCGTCGTTAAGCACGATATTTTATTTTCCACGGTTGTAAATGATAGAAATTCTATCACCNGTTNGATCAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 CTACGCCTACGCGCCCCCTCCCATGGCGCCGCCTCCGCCGCTCGCCGCGCTCCGCCCCGC 60 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 GCCATTCCCTCTCCCTCGCCTCCTCCCCTGCCCCGCCTCCGCCGCCGCCCGCCGCGGCGC 120 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 CGTCGCCTTCTCGCTGCAGACCAACGTGCGGCTCCTCAAGCCCAACCGCCGCTCCCGGCG 180 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 ATCCCGGTACCCCTACTACGACCACGACGAGGACGAGGACGACGATGAGGCGGAGTTCGA 240 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 GTTTGAGGAAGGGGAGGAGGAGGAGGAAGACGGCTACGAGACCGATGATGATCTATCAGG 300 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 TTTGGAGTATCCTGGTGTACTTTATTCAAACAATCCTCGTGCTCCAATCAAGAAACCAGG 360 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 CCGGGAAAAACCAGCGCTGAAACAAAACTGGGAAGGAAGACAACCTAAAACACGAGACAG 420 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 ATGTGACACTTCAAAAAAAGTCGATGCTCTGCATGCCAAGAGTAAAGCTAGCAGATCAAC 480 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------GNACAAGGGGGAAGTAGAGTTGAAAAATGAAAGTATCTCTAGAAGCTT 48 consensus_11864#2 -------------------------------------------CGCCGCCTCCGCCGCTC 17 consensus_11864#0 TGGTCTTGTGGACATAGATAATGAAGTAGAGTTGAAAAATGAAAGTATCTCTAGAAGCTT 540 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 GTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTA 108 consensus_11864#2 GCCGCG----CTCCGCCC----CGCGCCATTCCCTCTCCCTCGCCTCCTCCCCTGCCCCG 69 consensus_11864#0 GTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTA 600 consensus_11864#3 --------------GGATTCGGCACGAGATCCGCCCGTCACCGTTTTCTTGTTTCATTGA 46 * * * * * consensus_11864#1 CTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGC 168 consensus_11864#2 CCTCCGCCGCCGCCCGCCGCGGCGCCGTCGCCTTCTCGCTGCAGACCA---ACGTGCGGC 126 consensus_11864#0 CTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGC 660 consensus_11864#3 ANAAAGCTCCTAAGGGTCCATTCCCTCTTAGCTCCTTTGTGCCTACAG---ATGAGCGAT 103 ** * * * * * consensus_11864#1 CTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGG 228 consensus_11864#2 T--CCTCAAGCCCAACC--GCCGCTCCCGGCGATC--CCGGTACCCCTACTA--CGACCA 178 consensus_11864#0 CTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGG 720 consensus_11864#3 TTTGCAANANGTGGGCTGGGACTAGCTTAGAAAAGTATCATACATTTCGTCA---GAGCA 160 * * * * * consensus_11864#1 TGTTAAAAGCAAGGATATGAAGAGGATGCTTGTTAGACAACCACAAATTTTGGAATACAC 288 consensus_11864#2 CGACGAGGACGAGGACGACGATGAGGCGGAGTTCGAGTTTGAGGAAGGGGAGGAGGAGGA 238 consensus_11864#0 TGTTAAAAGCAAGGATATGAAGAGGATGCTTGTTAGACAACCACAAATTTTGGAATACAC 780 consensus_11864#3 TGCTGCTCA-AAGGTTTTTCAGAGAAGACTGGAAGGAAAACATTAACATCGAGGCGGTAG 219 * *** * ** * consensus_11864#1 TCTCAGCAACCTGAAGTCTCATGTTGCATTTCTGGTGGGCATAGGTGTTCCTAGTGCACG 348 consensus_11864#2 GGAAGACGGCTACGAGACCGATGATGA---TCTATCAGGTTTGGAGTATCCTGGTGTACT 295 consensus_11864#0 TCTCAGCAACCTGAAGTCTCATGTTGCATTTCTGGTGGGCATAGGTGTTCCTAGTGCACG 840 consensus_11864#3 ATACTTCATGATTGAGAAGTAGGTTGT-----TTTTGAACCTATGCCACGCTGAAA-AGG 273 * ** * * ** * * ** * consensus_11864#1 GATAGGTCAAATTATTTCTGCTGCTCCATCATTTTTCTCTTACAGTGTTGAGCAGTCTCT 408 consensus_11864#2 --TTATTCAAACAATCCTCG-TGCTCCAATCAAGAAACCAGGCCGGGAAAAACCAGCGCT 352 consensus_11864#0 GATAGGTCAAATTATTTCTGCTGCTCCATCATTTTTCTCTTACAGTGTTGAGCAGTCTCT 900 consensus_11864#3 CCTGGGTT--GCTGTGCTGG-TATTCAATCATCAGCATTCGGCACACATATATCAATATC 330 * * * * * ** * * consensus_11864#1 GAAGCCAACC--ATAAGGTATCTGATTGAGGAAGTGGGCATTGAGGAGAGTGATGTGGGC 466 consensus_11864#2 GAAACAAAACTGGGAAGGAAGACAACCTAAAACACGAG-ACAGATGTGACACTTCAAAAA 411 consensus_11864#0 GAAGCCAACC--ATAAGGTATCTGATTGAGGAAGTGGGCATTGAGGAGAGTGATGTGGGC 958 consensus_11864#3 ACAGATACAT---CACTAACTACAGTTTAGACTTCCTTTTTTTTTACTCCTATTACAACA 387 * * * * * consensus_11864#1 AAAGTAGTGCAATTAAGCCCACAGATTCTGGTCCAGCGAATCGATAGTGCATGGAAATCT 526 consensus_11864#2 AAGTCGATGCTCTGCATGCCA-AGAGTAAAG-CTAGCAGATCAACTGGTCTTGTGGACAT 469 consensus_11864#0 AAAGTAGTGCAACTAAGCCCACAGATTCTGGTCCAGCGAATCGATAGTGCATGGAAATCT 1018 consensus_11864#3 AGGTGTAAATTCTTCATCTGA-TTCCTCCAGTCGAA-AAACAAATGGATGTTCCAGGAGT 445 * * * * * * * * * * * * consensus_11864#1 CGATTTCTTTTTCTATCAAAAGAATTANGGGCTCCAAAA-GATAACATTGNTAAAA--TG 583 consensus_11864#2 AGATA--ATGAAGTAGAAGTAGACTACTAAGTTGAAAAATGAAAGTATCTCTAGAAGCTT 527 consensus_11864#0 CGATTTCTTTTTCTATCAAAAGAATTAGGGGCTCCAAAA-GATAACATTGTTAAAA--TG 1075 consensus_11864#3 CAATCTAAGGATGAAAAGGGATGCACCAGAATGGTTGATGTGGCATTTTGTTGTCTA-CT 504 ** * * * * * consensus_11864#1 GTCACAAAACACCCACAGCTGCTTCATTACAGTATTGAGGATGGAATATTGGCCTCGAAT 643 consensus_11864#2 GTTTCAGAA-ACTTCAAGAAG----AATATGACTTTGATGATA-AATGGTTACCACTAAT 581 consensus_11864#0 GTCACAAAACACCCACAGCTGCTTCATTACAGTATTGAGGATGGAATA-TTGCCTCGAAT 1134 consensus_11864#3 GCCACGGTGACATCACCTTGACCATTAGCTAATGTTAAATATG-TCTAGC-ACAACAAAC 562 * * ** * ** * * * ** consensus_11864#1 CAATTTCCTTANAAGCATTGGCATGAGAGATCCTGATGGTCTCAAGG-ATTGACGAGTCT 702 consensus_11864#2 CGATTACTTGTGCACATTTGGACTGAAGGAATCTCATT-TTACAAAC-ATGTATGAG--A 637 consensus_11864#0 CAATTTCCTTAGAAGCATTGGCATGAGAGATACTGATGTTCTCAAGGTATTGACGAGTCT 1194 consensus_11864#3 TAACCATCTATTAGGGATGTATTAGGCAGCATCCTACGTTGCCGTAA-GTCTGTAGC--- 618 * * * * * * * * * * consensus_11864#1 GACTCAAGGGGTGGCNTTTGGCCTTGGAGGNAAATCTCAAACCAAAGNATCNTTTCTT-- 760 consensus_11864#2 GACACATGGCCTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGC 697 consensus_11864#0 GACTCA-GGTGTTGTCTTTGTCCTTGGAGGAAAATCTCAAACCAAAGTATCTTTACTT-- 1251 consensus_11864#3 GTCGTTAAGCACGATATTTTATTTTCCACGGTTGTAAATGATAGAAATTCTATCACCNGT 678 * * * * * * * * * * consensus_11864#1 TGGCCAANGACCTTAAAAAG-ATGNTCAATCCTTGCCAAG--ATNCCATGGNCTTGGGCT 817 consensus_11864#2 TAAGTGTTGGTGTTAAAAGC-AAG------------------------------------ 720 consensus_11864#0 -GGTCAATGACCTTAAAAACGATGTTCAATCCTTGACAAAGTATCCTATGTACTTGAGCT 1310 consensus_11864#3 TNGATCAAAAAAAAAAAAAA---------------------------------------- 698 **** consensus_11864#1 TGGCCCTTGACCTGGNAAT----------------------------------------- 836 consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 TGTCCCTTGACCAGAGAATCCGTCCCCGTCACCGTTTTCTTGTTTCATTGAAGAAAGCTC 1370 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 CTAAGGGTCCATTCCCTCTTAGCTCCTTTGTGCCTACAGATGAGCGATTTTGCAAGAGGT 1430 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 GGGCTGGGACTAGCTTAGAAAAGTATCATACATTTCGTCAGAGCATGCTGCTCAAAGGTT 1490 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 TTTCAGAGAAGACTGGAAGGAAAACATTAACATCGAGGCGGTAGATACTTCATGATTGAG 1550 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 AAGTAGGTTGTTTTTGAACCTATGCCACGCTGAAAAGGCCTGGGTTGCTGTGCTGGTATT 1610 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 CAATCATCAGCATTCGGCACACATATATCAATATCACAGATACATCACTAACTACAGTTT 1670 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 AGACTTCCTTTTTTTTTTACTCCTATTACAACAAGGTGTAAATTCTTCATCTGATTCCTC 1730 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 CAGTCGAAAAACAAATGGATGTTCCAGGAGTCAATCTAAGGATGAAAAGGGATGCACCAG 1790 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 AATGGTTGATGTGGCATTTTGTTGTCTACTGCCACGGTGACATCACCTTGACCATTAGCT 1850 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 AATGTTAAATATGTCTAGCACAACAAACTAACCATCTATTAGGGATGTATTAGGCAGCAT 1910 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 CCTACGTTGCCGTAAGTCTGTAGCGTCGTTAAGCACGATATTTTATTTTCCACGGTTGTA 1970 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ------------------------------------------------------------ consensus_11864#2 ------------------------------------------------------------ consensus_11864#0 AATGATAGAAATTCTATCACCAGTTCGATCTGTACTTTGTGCGCTTTTCTGGTTTGTTAT 2030 consensus_11864#3 ------------------------------------------------------------ consensus_11864#1 ---------- consensus_11864#2 ---------- consensus_11864#0 GTTGGAAAAT 2040 consensus_11864#3 ---------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||