These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11939#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2423 fasta sequence [CCTCGTCCTCTCGCCATGGCCGCACCATCCGCGAGCTCCCGTGCCTCCGCGATCTAGCGCGGCGCGGTGGCTCTCGCACCCCCGGCGTCGACGGAGCGCGGAGGAAGGCGGGCCTCCGTACAGAGGCAGTCGAGGGGCACGGGATTTAGGGGAGAGGGGTTGGGGGGATGGGGAGGAAGCCTGATCCGTCGAAGCCACACTACGGTGGCGGCGCCTCGCCGAGGGCAGCGAGGAGGACGCAGCCGTCGCCGGTTTTCCTGGGAACGGCGCTGTTCGTCCTAGGGTTTGTGTCCCTCTTCACGGGACACATCGTTACGGACGCCGACTGGTCCCGGATCCGGAGCCGGTGGCGATCCAAGCAGGTTAGAAATAACGAGCCCATAAATATTTGGAAATCGAGGTATTCCAACTTGTACTATGGATGCAGCAGGAGGAGCGTAAATTTCAGATCTGCTGTGCCGGAGAACAGTTCTACTGGTTACTTGCTGATTGGTACTAGCGGGGGACTAAATCAGCAGCGCATAGG-------GATAACAGATGCTGTTGTTGTCGCCCGAATATTGAATGCCACACTTGTTGTACCTGAGTTAGATCACCACTCATTCTGGAAGGATGATAGCGACTTCTCTGACATTTTTGACGTGGACTGGTTCATCTCTTACCTATCAAAGGATGTAACTATTGTCAAAAGAATCCCTTATGAGGTGATGATGTCAATGGATAAACTCCCATGGACCATGCGTGCGCCTA-GGAAATCCATG-CCT-GATTTTTACATTGATGAAGTTTTGCCTATCCTTATGCGAAGGCGAGCTTTGCAGCTAACAAAGTTTGATTATC-GGCTCACTAACGAGCTTGATGAAGAATTGCAGAAGTTACGCTGCCGAGT-AAATTTCCATGCATTAAGATTTACAAATTCCATACAAACTCTAGGTGAGAAATTGGTGCGCAAGCTGAGGAGCATGAGCTCACGATACGTTGCCGTTCACTTGAGG-TTGAGCCTGACATGCTTGCATTTTCTGGTTGTTACTATGGTGGTGGTGATAAAGAACGGAGGGAGTTAGGTGAAATTAGGAAAAGATGGGATACACTACCTGTAAGACTCTGAAACTTGGTGAGCTTAGGATCTGGATATATTTTTGTCGGTATTGCACTTCCTTTTTGTGGATTATTTCTTTTGCACTGATAAGGATGTGTTGGGTCAGATTTCCCTTAAAAACTATTGAGTGATAATGGCTGCTGTTAGTTCTGAGTGTCCATGTATTCTTTTGATCAATTAGTACCGATGGATCAATATTTGAATGATGAAATGATTTAGACTGATTCCTAGCAGGAGTTGAGCGCTGAGGATGAGCGCAGTAGGGGCAAATGTCCACTGACTCCTCAAGAAATTGGTTTGATGCTCCGAGCTCTTGGTTTTAGCAATGACACGTACCTGTATGTTGCTTCTGGAGAAATATATGGGGGAGAAGAAACTCTCCAGCCTCTGAGGGATCTCTTTCCAAACTACTACACCAAAGAAATGCTTGCTGGGAATGATTTGAAACCGTTCCTTCCGTTCTCTTCAAGATTGGCTGCAATTGATTTCATCGTATGTGACGGGAGTGATGTTTTTGTTACAAACAATAATGGAAACATGGCCAAGGTTTTAGCTGGACGAAGGCGATACATGGGCCACAAGAGAACCATTCGCCCAAATGCTAAAAAACTCAACTTACTATTTAAGAGACGGAAACAGATGGGATGGGATATATTTTCACAGAAGGTAAAGAAAGTGCAGAGGGGACTAATGGGAGAACCGGATGATATCAGACCAGGAAGAGATGATTTCAATGAATTTCCATCATCTTGCATCTGCCAAAGAATACCAGTCAATAGATCAGTCACAGCGCGAGCTGAAAACTTGTGAGCTCTAGTGTAGTGAGGCAGACAACTTGAGAACGGAGAATGCTGG-GTGA-TTGAGCACGTCCCTTG-CTGCACTGGGGAAAATACATGTTTGTTAAGCAAAGAAAACAGGGATGTAAACCCAATCAGACAGAAGCAGACGTGGTGGATAAATACTCTTACCGGCTTTAACTCATGGCACTCTGGTAGTCTGGTGGTTCAGACCCAGCAGAACTGGTTAGTGTGCAGCGATGAC-AGACA-AACTGCTGATTTGCAGCTTCAGTTTGGTTCCACTAATTGTTAAAACTGTGGTAAAGAATCTGCCACGATAATTGTAGTCATTAGCTCGATATGCTATCCCTGTAAATTGTACGGTATACACGATCAATTATTTGGATGTGTGCTTCAATCGTCCCATCTTCTGTCTGGTAGAACCTCACAGCAACGAACTTATTTGCTGAAGGGAAATGCCATTGTACCAGAAACTTGGAAATTGAAAATTGCGGTGATTACGTGTAATTTATTTCCTTTTAACGAGCCAAAAA] [+] EMBL AK103502 [CCTCGTCCTCTCGCCATGGCCGCACCATCCGCGAGCTCCCGTGCCTCCGCGATCTAGCGCGGCGCGGTGGCTCTCGCACCCCCGGCGTCGACGGAGCGCGGAGGAAGGCGGGCCTCCGTACAGAGGCAGTCGAGGGGCACGGGATTTAGGGGAGAGGGGTTGGGGGGATGGGGAGGAAGCCTGATCCGTCGAAGCCACACTACGGTGGCGGCGCCTCGCCGAGGGCAGCGAGGAGGACGCAGCCGTCGCCGGTTTTCCTGGGAACGGCGCTGTTCGTCCTAGGGTTTGTGTCCCTCTTCACGGGACACATCGTTACGGACGCCGACTGGTCCCGGATCCGGAGCCGGTGGCGATCCAAGCAGGTTAGAAATAACGAGCCCATAAATATTTGGAAATCGAGGTATTCCAACTTGTACTATGGATGCAGCAGGAGGAGCGTAAATTTCAGATCTGCTGTGCCGGAGAACAGTTCTACTGGTTACTTGCTGATTGGTACTAGCGGGGGACTAAATCAGCAGCGCATAGG GATAACAGATGCTGTTGTTGTCGCCCGAATATTGAATGCCACACTTGTTGTACCTGAGTTAGATCACCACTCATTCTGGAAGGATGATAGCGACTTCTCTGACATTTTTGACGTGGACTGGTTCATCTCTTACCTATCAAAGGATGTAACTATTGTCAAAAGAATCCCTTATGAGGTGATGATGTCAATGGATAAACTCCCATGGACCATGCGTGCGCCTA GGAAATCCATG CCT GATTTTTACATTGATGAAGTTTTGCCTATCCTTATGCGAAGGCGAGCTTTGCAGCTAACAAAGTTTGATTATC GGCTCACTAACGAGCTTGATGAAGAATTGCAGAAGTTACGCTGCCGAGT AAATTTCCATGCATTAAGATTTACAAATTCCATACAAACTCTAGGTGAGAAATTGGTGCGCAAGCTGAGGAGCATGAGCTCACGATACGTTGCCGTTCACTTGAGG TTGAGCCTGACATGCTTGCATTTTCTGGTTGTTACTATGGTGGTGGTGATAAAGAACGGAGGGAGTTAGGTGAAATTAGGAAAAGATGGGATACACTACCTGTAAGACTCTGAAACTTGGTGAGCTTAGGATCTGGATATATTTTTGTCGGTATTGCACTTCCTTTTTGTGGATTATTTCTTTTGCACTGATAAGGATGTGTTGGGTCAGATTTCCCTTAAAAACTATTGAGTGATAATGGCTGCTGTTAGTTCTGAGTGTCCATGTATTCTTTTGATCAATTAGTACCGATGGATCAATATTTGAATGATGAAATGATTTAGACTGATTCCTAGCAGGAGTTGAGCGCTGAGGATGAGCGCAGTAGGGGCAAATGTCCACTGACTCCTCAAGAAATTGGTTTGATGCTCCGAGCTCTTGGTTTTAGCAATGACACGTACCTGTATGTTGCTTCTGGAGAAATATATGGGGGAGAAGAAACTCTCCAGCCTCTGAGGGATCTCTTTCCAAACTACTACACCAAAGAAATGCTTGCTGGGAATGATTTGAAACCGTTCCTTCCGTTCTCTTCAAGATTGGCTGCAATTGATTTCATCGTATGTGACGGGAGTGATGTTTTTGTTACAAACAATAATGGAAACATGGCCAAGGTTTTAGCTGGACGAAGGCGATACATGGGCCACAAGAGAACCATTCGCCCAAATGCTAAAAAACTCAACTTACTATTTAAGAGACGGAAACAGATGGGATGGGATATATTTTCACAGAAGGTAAAGAAAGTGCAGAGGGGACTAATGGGAGAACCGGATGATATCAGACCAGGAAGAGATGATTTCAATGAATTTCCATCATCTTGCATCTGCCAAAGAATACCAGTCAATAGATCAGTCACAGCGCGAGCTGAAAACTTGTGAGCTCTAGTGTAGTGAGGCAGACAACTTGAGAACGGAGAATGCTGG GTGA TTGAGCACGTCCCTTG CTGCACTGGGGAAAATACATGTTTGTTAAGCAAAGAAAACAGGGATGTAAACCCAATCAGACAGAAGCAGACGTGGTGGATAAATACTCTTACCGGCTTTAACTCATGGCACTCTGGTAGTCTGGTGGTTCAGACCCAGCAGAACTGGTTAGTGTGCAGCGATGAC AGACA AACTGCTGATTTGCAGCTTCAGTTTGGTTCCACTAATTGTTAAAACTGTGGTAAAGAATCTGCCACGATAATTGTAGTCATTAGCTCGATATGCTATCCCTGTAAATTGTACGGTATACACGATCAATTATTTGGATGTGTGCTTCAATCGTCCCATCTTCTGTCTGGTAGAACCTCACAGCAACGAACTTATTTGCTGAAGGGAAATGCCATTGTACCAGAAACTTGGAAATTGAAAATTGCGGTGATTACGTGTAATTTATTTCCTT ] [+] EMBL CF303514 [ GGGAGGAAGCCTGATCCGTCGAAGCC CACTACGGTGGCGGCGCCTCGCCGAGGGCAGCGAGGAGGACGCAGCCGTCGCCGGTTTTCCTGGGAACGGCGCTGTTCGTCCTAGGGTTTGTGTCCCTCTTCACGGGACACATCGTTACGGACGCCGACTGGTCCCGGATCCGGAGCCGGTGGCGATCCAAGCAGGTTAGAAATAACGAGCCCATAAATATTTGGAAATCGAGGTATTCCAACTTGTACTATGGATGCAGCAGGAGGAGCGTAAATTTCAGATCTGCTGTGCCGGAGAACAGTACTTCTGGTTACTTGCTGATTGGTACTAGCGGGGGACTAAATCAGCAGCGCATAGGGTTTCCAGATAACAGATGCTGTTGTTGTCGCCCGAATATTGAATGCCACACTTGTTGTACCTGAGTTAGATCACCACTCATTCTGGAAGGATGATAGCGACTTCTCTGACATTTTTGACGTGGACTGGTTCATCTCTTACCTATCAAAGGATGTAACTATTGTCAAAAGAATCCCTTATGAGGTGATGATGTCAATGGATAAACTCCCATGGACCAT ] [+] EMBL AU056590 [ GATCCAAGCAGGTTAGAAATAACGAGCCCATAAATATTTGGAAATCGAGGTATTCCAACTTGTACTATGGATGCAGCAGGAGGAGCGTAAATTTCAGATCTGCTGTGCCGGAGAACAGTTCTACTGGTTACTTGCTGATTGGTACTAGCGGGGGACTAAATCAGCAGCGCATAGG GATAACAGATGCTGTTGTTGTCGCCCGAATATTGAATGCCACACTTGTTGTACCTGAGTTAGATCACCACTCATTCTGGAAGGATGATAGCGACTTCTCTGACATTTTTGACGTGGACTGGTTCATCTCTTACCTATCAAAGGATGTAACTATTGTCAAAAGAATCCCTTATGAGGTGATGATGTCAATGGATAAACTCCCATGGACCATGCGTGCGCCTAGGGAAATCCATGNCCTGGATTTTTACATTGATGAAGTTTTGCCTATCCTTATGCGAAGGCGAGCTTTGCAGCTAACAAAGTTTGATTATCGGGGTCACGAACGAGCTTGATGAAGAATTGCAGAAGTTACGCTGCCGAGTAAAATTTCCATGCATTAAGATTTACAAATTCCATACAAANTCTAGGTGAGAAATTGGTGCGCAA CTGAGGNGCATGAGCTCACcga ] [+] EMBL CF305570 [ AGATCACCACTCATTCTGGAAGGATGATAGCGACTTCTCTGACATTTTTGACGTGGACTGGTTCATCTCTTACCTATCAAAGGATGTAACTATTGTCAAAAGAATCCCTTATGAGGTGATGATGTCAATGGATAAACTCCCATGGACCATGCGTGCGCCTA GGAAATCCATG CCT GATTTTTACATTGATGAAGTTTTGCCTATCCTTATGCGAAG GCTTTGCAGCTAACAAAGTTTGATTATC GGCTCACTAACGAGCTTGATGAAGAATTGCAGAAGTTACGCTGCCGAGT AAATTTCCATGCATTAAGATTTACAAATTCCATACAAACTCTAGGTGAGAAATTGGTGCGCAAGCTGAGGAGCATGAGCTCACGATACGTTGCCGTTCACTTGAGGTTTGAGCCTGACA ] [+] EMBL BI810405 [ gagGAACGGAGAATGCTGGTGTGATTTGAGCACGTCCCTTGTCTGCACTGGGGAAAATACAAGTTTGTTAAGCAAAGAAAGCAGGGATGTAAACCC ATCAGACAGAAGCAGACGTGGTGGATAAATACTCTTACCGGCTTTAACTCATGGCACTCTGGTAGTCTGGTGGTTCAGACCCAGCAGAACTGGTTAGTGTGCAGCGATGACAAGACACAACTGCTGATTTGCAGCTTCAGTTTGGTTCCACTAATTGTTAAAACTGTGGTAAAGAATCTGCCACGATAATTGTAGTCATTAGCTCGATATGCTATCCCTGTAAATTGTACGGTATACACGATCAATTATTTGGATGTGTGCTTCAATCGTCCCATCTTCTGTCTGGTAGAACCTCACAGCAACGAACTTATTTGCTGAAGGGAAATGCCATTGTACCAGAAACTTGGAAATTGAAAATTGCGGTGATTACGTGTAATTTATTTCCTTTTAACGAGCCAAAAA] consensusID : consensus_11939#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 951 fasta sequence [TCTAAATGTAAAGTATAGTTGAATGTAAACAGATAAGCCTTCAGGTATGATGCAATCCACCTGATTATACTATTTTTCTCCCTAGTGCTACGTGTGACCCTTTTTCATGTATTTTTCGTATGTGTCTATCGTTGGTGGTTTTGTTTCATCTAATGGTCATTCATCTCTGTCTACTTGTAGGCGATACATGGGCCACAAGAGAACCATTCGCCCAAATGCTAAAAAACTCAACTTACTATTTAAGAGACGGAAACAGATGGGATGGGATATATTTTCACAGAAGGTAAAGAAAGTGCAGAGGGGACTAATGGGAGAACCGGATGATATCAGACCAGGAAGAGATGATTTCAATGAATTTCCATCATCTTGCATCTGCCAAAGAATACCAGTCAATAGATCAGTCACAGCGCGAGCTGAAAACTTGTGAGCTCTAGTGTAGTGAGGCAGACAACTTGAGAACGGAGAATGCTGGGTGATTGAGCACGTCCCTTGCTGCACTGGGGAAAATACATGTTTGTTAAGCAAAGAAAACAGGGATGTAAACCCAATCAGACAGAAGCAGACGTGGTGGATAAATACTCTTACCGGCTTTAACTCATGGCACTCTGGTAGTCTGGTGGTTCAGACCCAGCAGAACTGGTTAGTGTGCAGCGATGACAGACAAACTGCTGATTTGCAGCTTCAGTTTGGTTCCACTAATTGTTAAAACTGTGGTAAAGAATCTGCCACGATAATTGTAGTCATTAGCTCGATATGCTATCCCTGTAAATTGTACGGTATACACGATCAATTATTTGGATGTGTGCTTCAATCGTCCCATCTTCTGTCTGGTAGAACCTCACAGCAACGAACTTATTTGCTGAAGGGAAATGCCATTGTACCAGAAACTTGGAAATTGAAAATTGCGGTGATTACGTGTAATTTATTTCCTTTTAACGAGCCAGTCTGGTT] [+] EMBL AK061936 [TCTAAATGTAAAGTATAGTTGAATGTAAACAGATAAGCCTTCAGGTATGATGCAATCCACCTGATTATACTATTTTTCTCCCTAGTGCTACGTGTGACCCTTTTTCATGTATTTTTCGTATGTGTCTATCGTTGGTGGTTTTGTTTCATCTAATGGTCATTCATCTCTGTCTACTTGTAGGCGATACATGGGCCACAAGAGAACCATTCGCCCAAATGCTAAAAAACTCAACTTACTATTTAAGAGACGGAAACAGATGGGATGGGATATATTTTCACAGAAGGTAAAGAAAGTGCAGAGGGGACTAATGGGAGAACCGGATGATATCAGACCAGGAAGAGATGATTTCAATGAATTTCCATCATCTTGCATCTGCCAAAGAATACCAGTCAATAGATCAGTCACAGCGCGAGCTGAAAACTTGTGAGCTCTAGTGTAGTGAGGCAGACAACTTGAGAACGGAGAATGCTGGGTGATTGAGCACGTCCCTTGCTGCACTGGGGAAAATACATGTTTGTTAAGCAAAGAAAACAGGGATGTAAACCCAATCAGACAGAAGCAGACGTGGTGGATAAATACTCTTACCGGCTTTAACTCATGGCACTCTGGTAGTCTGGTGGTTCAGACCCAGCAGAACTGGTTAGTGTGCAGCGATGACAGACAAACTGCTGATTTGCAGCTTCAGTTTGGTTCCACTAATTGTTAAAACTGTGGTAAAGAATCTGCCACGATAATTGTAGTCATTAGCTCGATATGCTATCCCTGTAAATTGTACGGTATACACGATCAATTATTTGGATGTGTGCTTCAATCGTCCCATCTTCTGTCTGGTAGAACCTCACAGCAACGAACTTATTTGCTGAAGGGAAATGCCATTGTACCAGAAACTTGGAAATTGAAAATTGCGGTGATTACGTGTAATTTATTTCCTTTTAACGAGCCAGTCTGGTT] consensusID : consensus_11939#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence [ATCCGTCGAAGCCACACTACGGTGGCGGCGCCTCGCCGAGGGCAGCGAGGAGGACGCAGCCGTCGCCGGTTTTCCTGGGAACGGCGCTGTTCGTCCTAGGGTTTGTGTCCCTCTTCACGGGACACATCGTTACGGACGCCGACTGGTCCCGGATCCGGAGCCGGTGGCGATCCAAGCAGGTTAGAAATAACGAGCCCATAAATATTTGGAAATCGAGGTATTCCAACTTGTACTATGGATGCAGCAGGAGGAGCGTAAATTTCAGATCTGCTGTGCCGGAGAACAGTTCTACTGGTTACTTGCTGATTGGTACTAGCGGGGGACTAAATCAGCAGCGCATAGGGGTACAACTGTATTTCAACTTTTTATTGCGTTGCTTTGTATTATCCATTGTATTACCATTACGATCTTCAGTTTCCAGATAACAGATGCTGTTGTTGTCGCCCGAATATTGAATGCCACACTTGTTGTACCTGAGTTAGATCACCACTCATTCTGGAAGGATGATAGCGACTTCTCTGACATTTTTGACGTGGACTGGTTCATCTCTTACCTATCAAAGGATGTAACTATTGTCAAAAGAATCCCTTATGAGGTGATGATGTCAATGGATAAACTCCCATGGACCATGCGTGCGCCTAGGAA] [+] EMBL CF306476 [ATCCGTCGAAGCCACACTACGGTGGCGGCGCCTCGCCGAGGGCAGCGAGGAGGACGCAGCCGTCGCCGGTTTTCCTGGGAACGGCGCTGTTCGTCCTAGGGTTTGTGTCCCTCTTCACGGGACACATCGTTACGGACGCCGACTGGTCCCGGATCCGGAGCCGGTGGCGATCCAAGCAGGTTAGAAATAACGAGCCCATAAATATTTGGAAATCGAGGTATTCCAACTTGTACTATGGATGCAGCAGGAGGAGCGTAAATTTCAGATCTGCTGTGCCGGAGAACAGTTCTACTGGTTACTTGCTGATTGGTACTAGCGGGGGACTAAATCAGCAGCGCATAGGGGTACAACTGTATTTCAACTTTTTATTGCGTTGCTTTGTATTATCCATTGTATTACCATTACGATCTTCAGTTTCCAGATAACAGATGCTGTTGTTGTCGCCCGAATATTGAATGCCACACTTGTTGTACCTGAGTTAGATCACCACTCATTCTGGAAGGATGATAGCGACTTCTCTGACATTTTTGACGTGGACTGGTTCATCTCTTACCTATCAAAGGATGTAACTATTGTCAAAAGAATCCCTTATGAGGTGATGATGTCAATGGATAAACTCCCATGGACCATGCGTGCGCCTAGGAA] consensusID : consensus_11939#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 290 fasta sequence [GACAAACTGCTGATTTGCNGCTTCAGTTTGGTTCCACTAATTGTTAAAACTGTGGTAAAGAATCTGCCNCGATAATTGTAGTCATTAGCTCGATATGCTATCCCTGTAAATTGTACGGTATACNCGATCAATTATTTGGATGTGTGCTTCAATCGTCCCATCTTCTGTCTGGTNGAACCTCACAGCAACGAACTTATTTGCTGAAGGGAAATGCCATTGTACCNGAAACTTGGAAATTGAAAATTGCGGTGATTACGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU056591 [GACAAACTGCTGATTTGCNGCTTCAGTTTGGTTCCACTAATTGTTAAAACTGTGGTAAAGAATCTGCCNCGATAATTGTAGTCATTAGCTCGATATGCTATCCCTGTAAATTGTACGGTATACNCGATCAATTATTTGGATGTGTGCTTCAATCGTCCCATCTTCTGTCTGGTNGAACCTCACAGCAACGAACTTATTTGCTGAAGGGAAATGCCATTGTACCNGAAACTTGGAAATTGAAAATTGCGGTGATTACGTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_11939#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 287 fasta sequence [AGGAAAAGATGGGATACACTACCTGAGTTGAGCGCTGAGGATGAGCGCAGTAGGGGCAAATGTCCACTGACTCCTCAAGAAATTGGTTTGATGCTCCGAGCTCTTGGTTTTAGCAATGACACGTACCTGTATGTTGCTTCTGGAGAAATATATGGGGGAGAAGAAACTCTCCAGCCTCTGAGGGATCTCTTTCCAAACTACTACACCAAAGAAATGCTTGCTGGGAATGATTTGAAACCGTTCCTTCCGTTCTCTTCAAGATTGGCTGCAATTGATTTCATCGTATG] [+] EMBL CA753567 [AGGAAAAGATGGGATACACTACCTGAGTTGAGCGCTGAGGATGAGCGCAGTAGGGGCAAATGTCCACTGACTCCTCAAGAAATTGGTTTGATGCTCCGAGCTCTTGGTTTTAGCAATGACACGTACCTGTATGTTGCTTCTGGAGAAATATATGGGGGAGAAGAAACTCTCCAGCCTCTGAGGGATCTCTTTCCAAACTACTACACCAAAGAAATGCTTGCTGGGAATGATTTGAAACCGTTCCTTCCGTTCTCTTCAAGATTGGCTGCAATTGATTTCATCGTATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11939#0 CCTCGTCCTCTCGCCATGGCCGCACCATCCGCGAGCTCCCGTGCCTCCGCGATCTAGCGC 60 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 GGCGCGGTGGCTCTCGCACCCCCGGCGTCGACGGAGCGCGGAGGAAGGCGGGCCTCCGTA 120 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 CAGAGGCAGTCGAGGGGCACGGGATTTAGGGGAGAGGGGTTGGGGGGATGGGGAGGAAGC 180 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 CTGATCCGTCGAAGCCACACTACGGTGGCGGCGCCTCGCCGAGGGCAGCGAGGAGGACGC 240 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 AGCCGTCGCCGGTTTTCCTGGGAACGGCGCTGTTCGTCCTAGGGTTTGTGTCCCTCTTCA 300 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 CGGGACACATCGTTACGGACGCCGACTGGTCCCGGATCCGGAGCCGGTGGCGATCCAAGC 360 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 AGGTTAGAAATAACGAGCCCATAAATATTTGGAAATCGAGGTATTCCAACTTGTACTATG 420 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 GATGCAGCAGGAGGAGCGTAAATTTCAGATCTGCTGTGCCGGAGAACAGTTCTACTGGTT 480 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 ACTTGCTGATTGGTACTAGCGGGGGACTAAATCAGCAGCGCATAGGGATAACAGATGCTG 540 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TTGTTGTCGCCCGAATATTGAATGCCACACTTGTTGTACCTGAGTTAGATCACCACTCAT 600 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TCTGGAAGGATGATAGCGACTTCTCTGACATTTTTGACGTGGACTGGTTCATCTCTTACC 660 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TATCAAAGGATGTAACTATTGTCAAAAGAATCCCTTATGAGGTGATGATGTCAATGGATA 720 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 --------TCTAAATGTAAAGTATAGTTGAATGTAAACAGATAAGCCTTCAGGTATGATG 52 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 AACTCCCATGGACCATGCGTGCGCCTAGGAAATCCATGCCTGATTTTTACATTGATGAAG 780 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 CAATCCACCTGATTATACTATTTTTCTCCCTAGTGCTACGTGTGACCCTTTTTCATGTAT 112 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TTTTGCCTATCCTTATGCGAAGGCGAGCTTTGCAGCTAACAAAGTTTGATTATCGGCTCA 840 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 TTTTCGTATGTGTCTATCGTTGGTGGTTTTGTTTCATCTAATGGTCATTCATCTCTGTCT 172 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 CTAACGAGCTTGATGAAGAATTGCAGAAGTTACGCTGCCGAGTAAATTTCCATGCATTAA 900 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ACTTGTAGGCGATACATGGGCCACAAGAGAACCATTCGCCCAAATGCTAAAAAACTCAAC 232 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 GATTTACAAATTCCATACAAACTCTAGGTGAGAAATTGGTGCGCAAGCTGAGGAGCATGA 960 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 TTACTATTTAAGAGACGGAAACAGATGGGATGGGATATATTTTCACAGAAGGTAAAGAAA 292 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 GCTCACGATACGTTGCCGTTCACTTGAGGTTGAGCCTGACATGCTTGCATTTTCTGGTTG 1020 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ----------------------------------------------------------AT 2 consensus_11939#1 GTGCAGAGGGGACTAATGGGAGAACCGGATGATATCAGACCAGGAAGAGATGATTTCAAT 352 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TTACTATGGTGGTGGTGATAAAGAACGGAGGGAGTTAGGTGAAATTAGGAAAAGATGGGA 1080 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 CCGTCGAAGCCACACTACGGTGGCGGCGCCTCGCCGAGGGCAGCGAGGAGGACGCAGCCG 62 consensus_11939#1 GAATTTCCATCATCTTGCATCTGCCAAAGAATACCAGTCAATAGATCAGTCACAGCGCGA 412 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TACACTACCTGTAAGACTCTGAAACTTGGTGAGCTTAGGATCTGGATATATTTTTGTCGG 1140 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 TCGCCGGTTTTCCTGGGAACGGCGCTGTTCGTCCTAGGGTTTGTGTCCCTCTTCACGGGA 122 consensus_11939#1 GCTGAAAACTTGTGAGCTCTAGTGTAGTGAGGCAGACAACTTGAGAACGGAGAATGCTGG 472 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TATTGCACTTCCTTTTTGTGGATTATTTCTTTTGCACTGATAAGGATGTGTTGGGTCAGA 1200 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 CACATCGTTACGGACGCCGACTGGTCCCGGATCCGGAGCCGGTGGCGATCCAAGCAGGTT 182 consensus_11939#1 GTGATTGAGCACGTCCCTTGCTGCACTGGGGAAAATACATGTTTGTTAAGCAAAGAAAAC 532 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TTTCCCTTAAAAACTATTGAGTGATAATGGCTGCTGTTAGTTCTGAGTGTCCATGTATTC 1260 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 AGAAATAACGAGCCCATAAATATTTGGAAATCGAGGTATTCCAACTTGTACTATGGATGC 242 consensus_11939#1 AGGGATGTAAACCCAATCAGACAGAAGCAGACGTGGTGGATAAATACTCTTACCGGCTTT 592 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TTTTGATCAATTAGTACCGATGGATCAATATTTGAATGATGAAATGATTTAGACTGATTC 1320 consensus_11939#4 -----------------------------------AGGAAAAGATGGGATACACTACCT- 24 consensus_11939#2 AGCAGGAGGAGCGTAAATTTCAGATCTGCTGTGCCGGAGAACAGTTCTACTGGTTACTTG 302 consensus_11939#1 AACTCATGGCACTCTGGTAGTCTGGTGGTTCAGACCCAGCAGAACTGGTTAGTGTGCAGC 652 consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 CTAGCAGG----AGTTGAGCGCTGAGGATG-AGCGCAGTAGGG-GCAAATGTCCACTGAC 1374 consensus_11939#4 -------G----AGTTGAGCGCTGAGGATG-AGCGCAGTAGGG-GCAAATGTCCACTGAC 71 consensus_11939#2 CTGATTGGTACTAGCGGGGGACTAAATCAGCAGCGCATAGGGGTACAACTGTATTTCAAC 362 consensus_11939#1 GATGACAG-----ACAAACTGCTGATTTGCAGCTTCAGTTTGGTTCCACTAATTGTTAAA 707 consensus_11939#3 -------G-----ACAAACTGCTGATTTGCNGCTTCAGTTTGGTTCCACTAATTGTTAAA 48 * ** * ** ** * * * * consensus_11939#0 TCCTCAAGAAATTGGTTTG-ATGCTCCGAGCTCTTGGTTTTAGCAATGACACGTACCTGT 1433 consensus_11939#4 TCCTCAAGAAATTGGTTTG-ATGCTCCGAGCTCTTGGTTTTAGCAATGACACGTACCTGT 130 consensus_11939#2 TTTTTATTGCGTTGCTTTGTATTATCCATTGTATTACCATTA-CGATCTTCAGTTTCCAG 421 consensus_11939#1 ACTGTGGTAAAG-AATCTGCCACGATAATTGTAGTCATTAGCTCGATATGCTATCCCTGT 766 consensus_11939#3 ACTGTGGTAAAG-AATCTGCCNCGATAATTGTAGTCATTAGCTCGATATGCTATCCCTGT 107 * ** * * * ** * * consensus_11939#0 AT----GTTGC-TTCTGGAGAAATATATGGGGGAGAAGAAACTCTC-CAGCCTCTGAG-- 1485 consensus_11939#4 AT----GTTGC-TTCTGGAGAAATATATGGGGGAGAAGAAACTCTC-CAGCCTCTGAG-- 182 consensus_11939#2 ATAACAGATGC-TGTTGTTGTCGCCCGAATATTGAATGCCACACTTGTTGTACCTGAGTT 480 consensus_11939#1 AA----ATTGTACGGTATACACGATCAATTATTTGGATGTGTGCTTCAATCGTCCCATC- 821 consensus_11939#3 AA----ATTGTACGGTATACNCGATCAATTATTTGGATGTGTGCTTCAATCGTCCCATC- 162 * ** * ** * * consensus_11939#0 GGATCTCTTTCCAAACTACTACACCAAAGAAATGCTTGCTGGGAAT----GATTTGAAAC 1541 consensus_11939#4 GGATCTCTTTCCAAACTACTACACCAAAGAAATGCTTGCTGGGAAT----GATTTGAAAC 238 consensus_11939#2 AGATCACCACTCATTCTGGAAGGATGATAGCGACTTCTCTGACATTTT-TGACGTGGACT 539 consensus_11939#1 TTCTGTCTGGTAGAACCTCACAGCAACGAACTTATTTGCTGAAGGGAAATGCCATTGTAC 881 consensus_11939#3 TTCTGTCTGGTNGAACCTCACAGCAACGAACTTATTTGCTGAAGGGAAATGCCATTGTAC 222 * * * * *** * * consensus_11939#0 CGTTCCTTCCGTTCTCTTCAA--GAT-TGGCTG----CAATTGATTTCATCGTATGTGAC 1594 consensus_11939#4 CGTTCCTTCCGTTCTCTTCAA--GAT-TGGCTG----CAATTGATTTCATCGTATG---- 287 consensus_11939#2 GGTTCATCTCTTACCTATCAAAGGATGTAACTATTGTCAAAAGAATCCCTTATGAGGTGA 599 consensus_11939#1 CAGAAACTTGGAAATTGAAAATTGCGGTGATTACGTGTAATTTATTTCCTTTTAACGAGC 941 consensus_11939#3 CNGAAACTTGGAAATTGAAAATTGCGGTGATTACGTGTAAAAAAAAAAAAAAAAAAAAAA 282 ** * * * ** * consensus_11939#0 GGGAGTGATGTTTTTGTTACAAACAATAATGGAAACATGGCCAAGGTTTTAGCTGGACGA 1654 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 TGATGTCAATGGATAAACTCCCATGGACCATGCGTGCGCCTAGGAA-------------- 645 consensus_11939#1 CAGTCTGGTT-------------------------------------------------- 951 consensus_11939#3 AAAAAAAA---------------------------------------------------- 290 consensus_11939#0 AGGCGATACATGGGCCACAAGAGAACCATTCGCCCAAATGCTAAAAAACTCAACTTACTA 1714 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TTTAAGAGACGGAAACAGATGGGATGGGATATATTTTCACAGAAGGTAAAGAAAGTGCAG 1774 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 AGGGGACTAATGGGAGAACCGGATGATATCAGACCAGGAAGAGATGATTTCAATGAATTT 1834 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 CCATCATCTTGCATCTGCCAAAGAATACCAGTCAATAGATCAGTCACAGCGCGAGCTGAA 1894 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 AACTTGTGAGCTCTAGTGTAGTGAGGCAGACAACTTGAGAACGGAGAATGCTGGGTGATT 1954 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 GAGCACGTCCCTTGCTGCACTGGGGAAAATACATGTTTGTTAAGCAAAGAAAACAGGGAT 2014 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 GTAAACCCAATCAGACAGAAGCAGACGTGGTGGATAAATACTCTTACCGGCTTTAACTCA 2074 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TGGCACTCTGGTAGTCTGGTGGTTCAGACCCAGCAGAACTGGTTAGTGTGCAGCGATGAC 2134 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 AGACAAACTGCTGATTTGCAGCTTCAGTTTGGTTCCACTAATTGTTAAAACTGTGGTAAA 2194 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 GAATCTGCCACGATAATTGTAGTCATTAGCTCGATATGCTATCCCTGTAAATTGTACGGT 2254 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 ATACACGATCAATTATTTGGATGTGTGCTTCAATCGTCCCATCTTCTGTCTGGTAGAACC 2314 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 TCACAGCAACGAACTTATTTGCTGAAGGGAAATGCCATTGTACCAGAAACTTGGAAATTG 2374 consensus_11939#4 ------------------------------------------------------------ consensus_11939#2 ------------------------------------------------------------ consensus_11939#1 ------------------------------------------------------------ consensus_11939#3 ------------------------------------------------------------ consensus_11939#0 AAAATTGCGGTGATTACGTGTAATTTATTTCCTTTTAACGAGCCAAAAA 2423 consensus_11939#4 ------------------------------------------------- consensus_11939#2 ------------------------------------------------- consensus_11939#1 ------------------------------------------------- consensus_11939#3 ------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||