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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11968#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2069 fasta sequence
[AGCTACTACGCGTCGTGGCTTCTCGCGCTGCATTCCGAGAGACGACGAAGCGGTGGTGGTGGTGGCGGCGGCGCTGCAGGCAAGGCGCGAGGACGGTGAGCGGCATGGCGGGGCGAGGAGAGGGGAACGGCGCTGCGACGATGGCGGGGGTGGCCACCGGTGGCGTGGAGGACGCCTACGGCGAGGACCGCGCCACCGAGGACCAGCCCATCACGCCGTGGGCCGTCTGCGTCGCCAGCGGTCACTCTCTGCTGAGGGATCCACGGCACAACAAGGGGCTATCATTCACGGAGAAAGAGCGAGACGCCCACTACCTGCGGGGTTTGCTGCCTCCAGTCGTGCTCTCCCAAGAACTTCAGGAGAAGAGGCTTCTGCAAAATGTGCGGCAGTTTCAGGTTCCTCTGCAACGTTACATGGCTCTGATGGACCTTCAGGAGAGGAATGAGAGGCTTTTCTACAAGCTCCTGATCGACAACGTTGAGGAATTGCTCCCCGTTGTGTACACGCCGACGGTGGGCGAGGCTTGCCAGAAGTACGGGTCAATCTTTAGACGACCACAGGGTCTGTACATCAGTCTTAAAGAGAAGGGGAGAATATTGGAGTTACTGAGGAACTGGCCAGAGAAGAGCATTCAGGTTATTGTTGTTACTGATGGTGAGCGCATTTTAGGTCTCGGGGATCTTGGTTGCCAGGGTATGGGAATCCCTGTGGGAAAGCTTGCACTATACACAGCCCTTGGAGGTGTCCGGCCTTCTGCTTGCTTACCTATCACCATTGATGTGGGAACAAACAATGAGGATTTACTGAAGGACGAGTTCTACATTGGATTAAGACAAAAACGAGCCACTGGCCAGGAATATAGTGATCTTCTGGATGAATTCATGGCTGCTATTAAGCAGAACTATGGACAGAAGGTGCTAGTCCAGTTTGAAGACTTCGCAAATTACAATGCATTTACCCTTCTTGAGAAGTACCGTGCAAACAATCTTGTCTTCAATGATGATATTCAGGGAACGGCTGCTGTAGTGCTTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGTGGGACTTTAGCTGATCACACATTCTTATTCTTTGGCGCAGGAGAGGCTGGTACAGGCATTGCTGAACTAGTGGCTCTCGAGATATCAAATCAGTCCAAAGTTCCAGTGGAAGATGCTCGCAAAAAGATCTGGCTACTTGATTCAAAGGGGTTGATTGTCAGTTCACGTAAAGATTCTCTTCAGCCCTTTAAGAAGCGATATGCCCATGAGCATGAACCAGTCAAAGATCTACTGGATGCTGTTAAGGTTATCAAACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAGAGGTGATTGAGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCCAATCCAACATCACAATCTGAATGTACTGCTGAACAGGCATATTCATGGAGTAAGGGCCGTGCAATATTTGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTGCCTGCACAGGCAAACAATGCATATATATTCCCAGGATTTGGCCTAGGCGTAGTGATTTCAGGAGCGATAAGGGTGAAAGATGAAATGATCCTTGCTGCTGCTGAAGGCTTAGCTGACCAGGTGACCCCAGAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGATATCAGCCAACATCGCAGCCCGCGTTGCTGCAAAAGCCTATGACCTTGGATTGGCTAGCCATCTCCCTCGCCCAAAAGACTTGGTGAAGTACGCTGAGAGCTGCATGTACAGCCCCATTTACCGTTCTTATAGATGAAGTGATGCTCACCTTAGTGTACAGCTTCATTTGGCTACAGCATGCTGTCTTGTATTACAGTAATAATTTGCGGTTGGACCTATATCGTACGGCAGTAGCATTTTATCCCTGAACTGTGCTTGTACATATTTGCCCTGT-------CATCATGTAATAAATAACCCAAGTCTGCTATTGCAGAATTTGGTTCAGTATGATTTTACTTTGTAAAAA]
[+] EMBL AK073858 [AGCTACTACGCGTCGTGGCTTCTCGCGCTGCATTCCGAGAGACGACGAAGCGGTGGTGGTGGTGGCGGCGGCGCTGCAGGCAAGGCGCGAGGACGGTGAGCGGCATGGCGGGGCGAGGAGAGGGGAACGGCGCTGCGACGATGGCGGGGGTGGCCACCGGTGGCGTGGAGGACGCCTACGGCGAGGACCGCGCCACCGAGGACCAGCCCATCACGCCGTGGGCCGTCTGCGTCGCCAGCGGTCACTCTCTGCTGAGGGATCCACGGCACAACAAGGGGCTATCATTCACGGAGAAAGAGCGAGACGCCCACTACCTGCGGGGTTTGCTGCCTCCAGTCGTGCTCTCCCAAGAACTTCAGGAGAAGAGGCTTCTGCAAAATGTGCGGCAGTTTCAGGTTCCTCTGCAACGTTACATGGCTCTGATGGACCTTCAGGAGAGGAATGAGAGGCTTTTCTACAAGCTCCTGATCGACAACGTTGAGGAATTGCTCCCCGTTGTGTACACGCCGACGGTGGGCGAGGCTTGCCAGAAGTACGGGTCAATCTTTAGACGACCACAGGGTCTGTACATCAGTCTTAAAGAGAAGGGGAGAATATTGGAGTTACTGAGGAACTGGCCAGAGAAGAGCATTCAGGTTATTGTTGTTACTGATGGTGAGCGCATTTTAGGTCTCGGGGATCTTGGTTGCCAGGGTATGGGAATCCCTGTGGGAAAGCTTGCACTATACACAGCCCTTGGAGGTGTCCGGCCTTCTGCTTGCTTACCTATCACCATTGATGTGGGAACAAACAATGAGGATTTACTGAAGGACGAGTTCTACATTGGATTAAGACAAAAACGAGCCACTGGCCAGGAATATAGTGATCTTCTGGATGAATTCATGGCTGCTATTAAGCAGAACTATGGACAGAAGGTGCTAGTCCAGTTTGAAGACTTCGCAAATTACAATGCATTTACCCTTCTTGAGAAGTACCGTGCAAACAATCTTGTCTTCAATGATGATATTCAGGGAACGGCTGCTGTAGTGCTTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGTGGGACTTTAGCTGATCACACATTCTTATTCTTTGGCGCAGGAGAGGCTGGTACAGGCATTGCTGAACTAGTGGCTCTCGAGATATCAAATCAGTCCAAAGTTCCAGTGGAAGATGCTCGCAAAAAGATCTGGCTACTTGATTCAAAGGGGTTGATTGTCAGTTCACGTAAAGATTCTCTTCAGCCCTTTAAGAAGCGATATGCCCATGAGCATGAACCAGTCAAAGATCTACTGGATGCTGTTAAGGTTATCAAACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAGAGGTGATTGAGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCCAATCCAACATCACAATCTGAATGTACTGCTGAACAGGCATATTCATGGAGTAAGGGCCGTGCAATATTTGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTGCCTGCACAGGCAAACAATGCATATATATTCCCAGGATTTGGCCTAGGCGTAGTGATTTCAGGAGCGATAAGGGTGAAAGATGAAATGATCCTTGCTGCTGCTGAAGGCTTAGCTGACCAGGTGACCCCAGAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGATATCAGCCAACATCGCAGCCCGCGTTGCTGCAAAAGCCTATGACCTTGGATTGGCTAGCCATCTCCCTCGCCCAAAAGACTTGGTGAAGTACGCTGAGAGCTGCATGTACAGCCCCATTTACCGTTCTTATAGATGAAGTGATGCTCACCTTAGTGTACAGCTTCATTTGGCTACAGCATGCTGTCTTGTATTACAGTAATAATTTGCGGTTGGACCTATATCGTACGGCAGTAGCATTTTATCCCTGAACTGTGCTTGTACATATTTGCCCTGT CATCATGTAATAAATAACCCAAGTCTGCTATTGCAGAAT ]
[+] EMBL AY444338 [ GAGAGACGACGAAGCGGTGGTGGTGGTGGCGGCGGCGCTGCAGGCAAGGCGCGAGGACGGTGAGCGGCATGGCGGGGCGAGGAGAGGGGAACGGCGCTGCGACGATGGCGGGGGTGGCCACCGGTGGCGTGGAGGACGCCTACGGCGAGGACCGCGCCACCGAGGACCAGCCCATCACGCCGTGGGCCGTCTGCGTCGCCAGCGGTCACTCTCTGCTGAGGGATCCACGGCACAACAAGGGGCTATCATTCACGGAGAAAGAGCGAGACGCCCACTACCTGCGGGGTTTGCTGCCTCCAGTCGTGCTCTCCCAAGAACTTCAGGAGAAGAGGCTTCTGCAAAATGTGCGGCAGTTTCAGGTTCCTCTGCAACGTTACATGGCTCTGATGGACCTTCAGGAGAGGAATGAGAGGCTTTTCTACAAGCTCCTGATCGACAACGTTGAGGAATTGCTCCCCGTTGTGTACACGCCGACGGTGGGCGAGGCTTGCCAGAAGTACGGGTCAATCTTTAGACGACCACAGGGTCTGTACATCAGTCTTAAAGAGAAGGGGAGAATATTGGAGTTACTGAGGAACTGGCCAGAGAAGAGCATTCAGGTTATTGTTGTTACTGATGGTGAGCGCATTTTAGGTCTCGGGGATCTTGGTTGCCAGGGTATGGGAATCCCTGTGGGAAAGCTTGCACTATACACAGCCCTTGGAGGTGTCCGGCCTTCTGCTTGCTTACCTATCACCATTGATGTGGGAACAAACAATGAGGATTTACTGAAGGACGAGTTCTACATTGGATTAAGACAAAAACGAGCCACTGGCCAGGAATATAGTGATCTTCTGGATGAATTCATGGCTGCTATTAAGCAGAACTATGGACAGAAGGTGCTAGTCCAGTTTGAAGACTTCGCAAATTACAATGCATTTACCCTTCTTGAGAAGTACCGTGCAAACAATCTTGTCTTCAATGATGATATTCAGGGAACGGCTGCTGTAGTGCTTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGTGGGACTTTAGCTGATCACACATTCTTATTCTTTGGCGCAGGAGAGGCTGGTACAGGCATTGCTGAACTAGTGGCTCTCGAGATATCAAATCAGTCCAAAGTTCCAGTGGAAGATGCTCGCAAAAAGATCTGGCTACTTGATTCAAAGGGGTTGATTGTCAGTTCACGTAAAGATTCTCTTCAGCCCTTTAAGAAGCGATATGCCCATGAGCATGAACCAGTCAAAGATCTACTGGATGCTGTTAAGGTTATCAAACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAGAGGTGATTGAGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCCAATCCAACATCACAATCTGAATGTACTGCTGAACAGGCATATTCATGGAGTAAGGGCCGTGCAATATTTGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTGCCTGCACAGGCAAACAATGCATATATATTCCCAGGATTTGGCCTAGGCGTAGTGATTTCAGGAGCGATAAGGGTGAAAGATGAAATGATCCTTGCTGCTGCTGAAGGCTTAGCTGACCAGGTGACCCCAGAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGATATCAGCCAACATCGCAGCCCGCGTTGCTGCAAAAGCCTATGACCTTGGATTGGCTAGCCATCTCCCTCGCCCAAAAGACTTGGTGAAGTACGCTGAGAGCTGCATGTACAGCCCCATTTACCGTTCTTATAGATGAAGTGATGCTCACCTTAGTGTACAGCTTCATTTGGCTACAGCATGCTGTCTTGTATTACAGTAATAATTTGCGGTTGGACCTATATCGTACGGCAGTAGCATTTTATCCCTGAACTGTGCTTGTACATATTTGCCC ]
[+] EMBL CF321576 [ AACAGGCATATTCATGGAGTAAGGGCCGTGCAATATTTGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTGCCTGCACAGGCAAACAATGCATATATATTCCCAGGATTTGGCCTAGGCGTAGTGATTTCAGGAGCGATAAGGGTGAAAGATAAAATGATCCTTGCTGCTGCTGAAGGCTTAGCTGACCAGGTGACCCCAGAGCATGTTGACAAAGGCCTTATTTATACACCCTTTTCCTGCATCAGGAAGATATCAGCCAACATCGCAGCCCGCGTTGCTGCAAAAGCCTATGACCTTGGATTGGCTAGCCATCTCCCTCGCCCAAAAGACTTGGTGAAGTACGCTGAGAGCTGCATGTACAGCCCCATTTACCGTTCTTATAGATGAAGTGATGCTCACCTTAGTGTACAGCTTCATTTGGCTACAGCATGCTGTCTTGTATTACAGTAATAATTTGCGGTTGGACCTATATCGTACGGCAGTAGCATTTTATCCCTGAACTGTGCTTGAACATATTTGCCCTG ]
[+] EMBL BI802462 [ GCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGATATCAGCCAACATCGCAGCCCGCGTTGCTGCAAAAGCCTATGACCTTGGATTGGCTAGCCATCTCCCTCGCCC AAAGACTTGGTGAAGTACGCTGAGAGCTGCATGTACAGCCCCATTTACCGTTCTTATAGATGAAGTGATGCTCACCTTAGTGTACAGCTTCATTTGGCTACAGCATGCTTTCTTGTATTACAGTAATAATTTGCGGTTGGACCTATATCGTACGGCAGTAGCATTTTATCCCTGAACTGTGCTTGTACATATTTGCCCTGTCATCATGCATCATGTAATAAATAACCCAAGTCTGCTATTGCAGAATTTGGTTCAGTATGATTTTACTTTGTAAAAA]
consensusID : consensus_11968#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 914 fasta sequence
[TTTTCGGTCTGTAAATGAGCTGTCNTAGGGGCAATTGTTCAATTGTTTTATTTTACAGTTTGAAGACTTCGCAAATTACAATGCATTTACCCTTCTTGAGAAGTACCGTGCAAACAATCTTGTCTTCAATGATGATATTCAGGTAGTAGGTTCAGATCTCACTTTTTGACTCTTCATATTGGTCTCGTTACAGTTCCTAAATGAAAGCGAACTAGTGAATGTGCATTTATACTGGGTTTCACAACAATAGGAGTAAACCATGAAACTGGTGGGTGTAAACAGGGAACGGCTGCTGTAGTGCTTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGTGGGACTTTAGCTGATCACACATTCTTATTCTTTGGCGCAGGAGAGGTAAGCTGACCTTCCCTTTCAGTGATATGGAGGGTGCATTCTGCATTGCTCACATTTACTTTAGACTGCTGCAACATGTCTGAACTCTGAACATCCATCTATACATCGCGTATTGTATTATAAGAATATACATTGAGTATTGCTTTTACATTCCTGTCATAACTTAGTGTACAGCTTCATTTGGCTACAGCATGCTTTCTTGTATTACAGTAATAATTTGCGGTTGGACCTATATCGTACGGCAGTAGCATTTTATCCCTGAACTGTGCTTGTACATATTTGCCTGTTAAGGTTCAGTTATGTCCTGATTGTGTGTCATCTGAAACTTGGGAGCTGCGTAATCCCCAGAAGGATTTTGGAAGCAGATTTGTCTTCTCCGCCCTGAACAGCCAGCCTATGTTGGACTCACAGGCAGCACAGAGAGCAATCGTCCACGTATAACCTGGAAACAAACTGTGAGCTTTGGAAGGAGCGCCACGGAGTGCAAGACCAGTTGCATTGTACACTGTCATCATCTCTTGCCCACAGCTGAA]
[-] EMBL BQ906484 [TTTTCGGTCTGTAAATGAGCTGTCNTAGGGGCAATTGTTCAATTGTTTTATTTTACAGTTTGAAGACTTCGCAAATTACAATGCATTTACCCTTCTTGAGAAGTACCGTGCAAACAATCTTGTCTTCAATGATGATATTCAGGTAGTAGGTTCAGATCTCACTTTTTGACTCTTCATATTGGTCTCGTTACAGTTCCTAAATGAAAGCGAACTAGTGAATGTGCATTTATACTGGGTTTCACAACAATAGGAGTAAACCATGAAACTGGTGGGTGTAAACAGGGAACGGCTGCTGTAGTGCTTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGTGGGACTTTAGCTGAT ]
[+] EMBL CB621201 [ CTCACTTTTTTACCCTTCATATTGGTCTCGTTACAGTTCCTAAATGAAAGCGAACTAGTGAATGTGCATTTATACTGGGTTTCACAACAATAGGAGTAAACCATGAAACT GT GGTGTAAACAGGGAACGGCTGCTGTAGTGCTTGCAGGCCTCATTGCTGCTCAAAAATTTGTCAGTGGGACTTTAGCTGATCACACATTCTTATTCTTTGGCGCAGGAGAGGTAAGCTGACCTTCCCTTTCAGTGATATGGAGGGTGCATTCTGCATTGCTCACATTTACTTTAGACTGCTGCAACATGTCTGAACTCTGAACATCCATCTATACATCGCGTATTGTATTATAAGAATATACATTGAGTATTGCTTTTACATTCCTGTCATAACTTAGTGTACAGCTTCATTTGGCTACAGCATGCTTTCTTGTATTACAGTAATAATTTGCGGTTGGACCTATATCGTACGGCAGTAGCATTTTATCCCTGAACTGTGCTTGTACATATTTGCCTGTTAAGGTTCAGTTATGTCCTGATTGTGTGTCATCTGAAACTTGGGAGCTGCGTAATCCCCAGAAGGATTTTGGAAGCAGATTTGTCTTCTCCGCCCTGAACAGCCAGCCTATGTTGGACTCACAGGCAGCACAGAGAGCAATCGTCCACGTATAACCTGGAAACAAACTGTGAGCTTTGGAAGGAGCGCCACGGAGTGCAAGACCAGTTGCATTGTACACTGTCATCATCTCTTGCCCACAGCTGAA]
consensusID : consensus_11968#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 778 fasta sequence
[AAAAGAATCTTATAAGGAAATTAAAGGCAGACCTATACGAATTACAAAATGGGGCCCTGACTTACTGTTAAGGTTCAGTTATGTCCTGATTGTGTGTCATCTGAAACTTGGGAGCTGCGTAATCCCCAGAAGGATTTTGGAAGCAGATTTGTCTTCTCCGCCCTGAACAGCCAGCCTATGTTGGACTCACAGGCAGCACAGAGAGCAATCGTCCACGTATAACCTGGAAACAAACTGTGAGCTTTGGAAGGAGCGCCACGGAGTGCAAGACCAGTTGCATTGTACACTGTCATCATCTCTTGCCCACAGCTGAACTGCTTGACATAAGCACCGACAGGGCCATCACTACGTCTTGAGATAAGAGCCTGCGACAAGAAATGGAATTGTTGCCATATTAGTCAAAACTTGAAAGTATTCCAACAAGTTCTGTTACAAATCCAGTTTAAATCAACCAGTGAGATCCAGCCCTTTAGAGGTAGAGAAGAAGCGATTAAAAGAACATGTCCCTTTGTCATTTACATAATGATTCAGAGAACTGAATCATGACTTAGATATCACCTGTTAATCAGAATACTAGTGTGCTTTGATGATCAAAACCCTGTCTCTCGGAAATCCTGGTAGTATGGTACCATGGTTGTTTAAAACACAGGCAACAACCAACAGATATCTGGATGAAGCGGTATGATTAAATATCGTTACTATTGCTTATCCTGCAGCCATGGTATGGTGTAGCAAACCAACTACAACTCTACCATATGTTTGCGACAGCAACCAAAGA]
[+] EMBL CB629272 [AAAAGAATCTTATAAGGAAATTAAAGGCAGACCTATACGAATTACAAAATGGGGCCCTGACTTACTGTTAAGGTTCAGTTATGTCCTGATTGTGTGTCATCTGAAACTTGGGAGCTGCGTAATCCCCAGAAGGATTTTGGAAGCAGATTTGTCTTCTCCGCCCTGAACAGCCAGCCTATGTTGGACTCACAGGCAGCACAGAGAGCAATCGTCCACGTATAACCTGGAAACAAACTGTGAGCTTTGGAAGGAGCGCCACGGAGTGCAAGACCAGTTGCATTGTACACTGTCATCATCTCTTGCCCACAGCTGAACTGCTTGACATAAGCACCGACAGGGCCATCACTACGTCTTGAGATAAGAGCCTGCGACAAGAAATGGAATTGTTGCCATATTAGTCAAAACTTGAAAGTATTCCAACAAGTTCTGTTACAAATCCAGTTTAAATCAACCAGTGAGATCCAGCCCTTTAGAGGTAGAGAAGAAGCGATTAAAAGAACATGTCCCTTTGTCATTTACATAATGATTCAGAGAACTGAATCATGACTTAGATATCACCTGTTAATCAGAATACTAGTGTGCTTTGATGATCAAAACCCTGTCTCTCGGAAATCCTGGTAGTATGGTACCATGGTTGTTTAAAACACAGGCAACAACCAACAGATATCTGGATGAAGCGGTATGATTAAATATCGTTACTATTGCTTATCCTGCAGCCATGGTATGGTGTAGCAAACCAACTACAACTCTACCATATGTTTGCGACAGCAACCAAAGA]
consensusID : consensus_11968#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 578 fasta sequence
[AGTAGAAAGGATTATGCTCGCAAAAAGATCTGGCTACTTGATTCAAAGTTCACGTAAAGATTCTCTTCAGCCCTTTAAGAAGCGATATGCCCATGAGCATGAACCAGTCAAAGATCTACTGGATGCTGTTAAGGTTATCAAACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAGAGGTGATTGAGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCCAATCCAACATCACAATCTGAATGTACTGCTGAACAGGCATATTCATGGAGTAAGGGCCGTGCAATATTTGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTGCCTGCACAGGCAAACAATGCATATATATTCCCAGGATTTGGCCTAGGCGTAGTGATTTCAGGAGCGATAAGGGTGAAAGATGAAATGATCCTTGCTGCTGCTGAAGGCTTAGCTGACCAGGTGACCCCAGAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGATATCAGCCAACATCGCAGCCCGCGTTGCTG]
[+] EMBL CF307941 [AGTAGAAAGGATTATGCTCGCAAAAAGATCTGGCTACTTGATTCAAAGTTCACGTAAAGATTCTCTTCAGCCCTTTAAGAAGCGATATGCCCATGAGCATGAACCAGTCAAAGATCTACTGGATGCTGTTAAGGTTATCAAACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAGAGGTGATTGAGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCCAATCCAACATCACAATCTGAATGTACTGCTGAACAGGCATATTCATGGAGTAAGGGCCGTGCAATATTTGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTGCCTGCACAGGCAAACAATGCATATATATTCCCAGGATTTGGCCTAGGCGTAGTGATTTCAGGAGCGATAAGGGTGAAAGATGAAATGATCCTTGCTGCTGCTGAAGGCTTAGCTGACCAGGTGACCCCAGAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGATATCAGCCAACATCGCAGCCCGCGTTGCTG]
[+] EMBL D43250 [ TTAAGAAGCGATATGCCCATGAGCATGAACCAGTCAAAGATCTACTGGATGCTGTTAAGGTTATCAAACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAGAGGTGATTGAGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCCAATCCAACATCACAATCTGAATGTACTGCTGAACAGGCATATTCATGGAGTAAGGGCCGTGCAATATTTGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTTTTCGTGCCTGCACAGG AAACAATGCATATATATTCCCAGGNTTTGGNCTAGGCGTAGTGATTTCAGGAG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11968#0 AGCTACTACGCGTCGTGGCTTCTCGCGCTGCATTCCGAGAGACGACGAAGCGGTGGTGGT 60
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 GGTGGCGGCGGCGCTGCAGGCAAGGCGCGAGGACGGTGAGCGGCATGGCGGGGCGAGGAG 120
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 AGGGGAACGGCGCTGCGACGATGGCGGGGGTGGCCACCGGTGGCGTGGAGGACGCCTACG 180
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 GCGAGGACCGCGCCACCGAGGACCAGCCCATCACGCCGTGGGCCGTCTGCGTCGCCAGCG 240
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 GTCACTCTCTGCTGAGGGATCCACGGCACAACAAGGGGCTATCATTCACGGAGAAAGAGC 300
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 GAGACGCCCACTACCTGCGGGGTTTGCTGCCTCCAGTCGTGCTCTCCCAAGAACTTCAGG 360
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 AGAAGAGGCTTCTGCAAAATGTGCGGCAGTTTCAGGTTCCTCTGCAACGTTACATGGCTC 420
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 TGATGGACCTTCAGGAGAGGAATGAGAGGCTTTTCTACAAGCTCCTGATCGACAACGTTG 480
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 AGGAATTGCTCCCCGTTGTGTACACGCCGACGGTGGGCGAGGCTTGCCAGAAGTACGGGT 540
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 CAATCTTTAGACGACCACAGGGTCTGTACATCAGTCTTAAAGAGAAGGGGAGAATATTGG 600
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 AGTTACTGAGGAACTGGCCAGAGAAGAGCATTCAGGTTATTGTTGTTACTGATGGTGAGC 660
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 GCATTTTAGGTCTCGGGGATCTTGGTTGCCAGGGTATGGGAATCCCTGTGGGAAAGCTTG 720
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 CACTATACACAGCCCTTGGAGGTGTCCGGCCTTCTGCTTGCTTACCTATCACCATTGATG 780
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 TGGGAACAAACAATGAGGATTTACTGAAGGACGAGTTCTACATTGGATTAAGACAAAAAC 840
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 GAGCCACTGGCCAGGAATATAGTGATCTTCTGGATGAATTCATGGCTGCTATTAAGCAGA 900
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 ACTATGGACAGAAGGTGCTAGTCCAGTTTGAAGACTTCGCAAATTACAATGCATTTACCC 960
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 TTCTTGAGAAGTACCGTGCAAACAATCTTGTCTTCAATGATGATATTCAGGGAACGGCTG 1020
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ------------------------------------------------------------
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 CTGTAGTGCTTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGTGGGACTTTAGCTGATC 1080
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 --------------------------------------------------TTTTCGGTCT 10
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 ACACATTCTTATTCTTTGGCGCAGGAGAGGCTGGTACAGGCATTGCTGAACTAGTGGCTC 1140
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 GTAAATGAGCTGTCNTAGGGGCAATTGTTCAATTGTTTTATTTTACAGTTTGAAGACTTC 70
consensus_11968#2 -AAAAGAATCTTATAAGGAAATTAAAGGCAGACCTATACGAATTACAAAATGGGGCCCTG 59
consensus_11968#0 TCGAGATATCAAATCAGTCCAAAGTTCCAGTGGAAGATGCTCGCAAAAAGATCTGGCTAC 1200
consensus_11968#3 -----------------------AGTAGAAAGGATTATGCTCGCAAAAAGATCTGGCTAC 37
consensus_11968#1 GCAAATTACAATGCATTTACCCT-TCTTGAGAA-GTAC-CGTGCAAACAATCTTGTCTTC 127
consensus_11968#2 ACTTACTGTTAAGGTTCAGTTATGTCCTGATTGTGTGT-CATCTGAAACTTGGGAGCTGC 118
* ** ** *
consensus_11968#0 TTGATTCAAAGGGGTTGATTGTCAGTTCACGTAAAGATTCTCTTCAGCCCTTTAAGAAGC 1260
consensus_11968#3 TTGATTCAAAG--------------TTCACGTAAAGATTCTCTTCAGCCCTTTAAGAAGC 83
consensus_11968#1 AATGATGATATTCA------GGTAGTAGGTTCAGATCTCACTTTTTGACTCTTCATATTG 181
consensus_11968#2 GTAATCCCCAGAAG------GATTTTGGAAGCAGATTTGTCTTCTCCGCCCTGAACAGCC 172
* * * * * * * * * *
consensus_11968#0 GATATGCCCATGAGCATGAACCAGT-CAAAG-ATCTACTGGATGCTGTTAA-GGTTATCA 1317
consensus_11968#3 GATATGCCCATGAGCATGAACCAGT-CAAAG-ATCTACTGGATGCTGTTAA-GGTTATCA 140
consensus_11968#1 GTCTCGTTACAGTTCCTAAATGAAAGCGAACTAGTGAATGTGCATTTATACTGGGTTTCA 241
consensus_11968#2 AGCCTATGTTGGACTCACAGGCAGCACAGAG-AGCAATCGTCCACGTATA----ACCTGG 227
* * * * * * * * ** *
consensus_11968#0 AACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAGAGGTGATTG 1377
consensus_11968#3 AACCGACTGCATTGATAGGTTCAGCTGGTGTGGGTCAAAGTTTCACAAAAGAGGTGATTG 200
consensus_11968#1 CAACAATAGGAGTAAACCATGAAACTGGTGGGTGTAAACAGGGAACGGCTGCTGTAGTGC 301
consensus_11968#2 AAACAA--ACTGTGAGCTTTGGAA--GGAGCGCCACGGAGTGCAAGACCAGTTGCATTGT 283
* * * * * * * ** * * * * * *
consensus_11968#0 AGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCCAATCCAACATCAC 1437
consensus_11968#3 AGGCTATGAGTTCAATTAATGAGAGACCAATCATCCTCGCACTATCCAATCCAACATCAC 260
consensus_11968#1 TTGCAGGCCTCATTGCTGCTCAGAAATTTGTCAGTGGGACTTTAGCTGATCACACATTCT 361
consensus_11968#2 ACACTGTCATCATCTCTTGCCCACAGCTGAACTGCTTGACATAAGC--ACCG-ACAGGGC 340
* * * * * * * * ***
consensus_11968#0 AATCTGAATGTACT-----GCTGAACAGGCATATTCATGGAGTAAGGGCCGTGCAATATT 1492
consensus_11968#3 AATCTGAATGTACT-----GCTGAACAGGCATATTCATGGAGTAAGGGCCGTGCAATATT 315
consensus_11968#1 TATTCTTTGGCGCAGGAGAGGTAAGCTGACCTTCCCTTTCAGTGATATGGAGGGTGCATT 421
consensus_11968#2 CATCACTACGTCT---TGAGATAAGA-GCCTGCGACAAGAAATGGAATTGTTGCCATATT 396
** * * * * * * * * * * ***
consensus_11968#0 TGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTT--TTCGTGCCTGCA 1550
consensus_11968#3 TGGGAGTGGAAGTCCATTTGATCCAGTTAAATACAATGACAAGCTT--TTCGTGCCTGCA 373
consensus_11968#1 CTGCATT--GCTCACATTTACTTTAG---ACTGCTGCAACATGTCTGAACTCTGAACATC 476
consensus_11968#2 AGTCAAA--ACTTGAAAGTATTCCAAC-AAGTTCTGTTACAAATCC-AGTTTAAATCAAC 452
* * * * * * * * ***
consensus_11968#0 CAGGCAAACAATGCATATATATTCCCAGGATTTGGC--CTAGGCGTA---GTGATTTCAG 1605
consensus_11968#3 CAGGCAAACAATGCATATATATTCCCAGGATTTGGC--CTAGGCGTA---GTGATTTCAG 428
consensus_11968#1 CATCTATACATCGCGTATTGTATTATAAGAATATAC-ATTGAG------TATTGCTTTTA 529
consensus_11968#2 CAGTGAGATCCAGCCCTTTAGAGGTAGAGAAGAAGCGATTAAAAGAACATGTCCCTTTGT 512
** * * ** * ** * * * **
consensus_11968#0 GAGCGATAAGGGTGAAAGATGAAATGATCCTTGCTGCTGCTGAAGGCTTAGCTGACCAGG 1665
consensus_11968#3 GAGCGATAAGGGTGAAAGATGAAATGATCCTTGCTGCTGCTGAAGGCTTAGCTGACCAGG 488
consensus_11968#1 CATTCCTGTCATAACTTAGTGTACAGCTTCAT---TTGGCT-ACAGCATGCTTTCTTGTA 585
consensus_11968#2 CATTTACATAATGATTCAGAGAACTGAATCATGACTTAGAT-ATCACCTGTTAATCAGAA 571
* * * * * * * * * * *
consensus_11968#0 TGACCCCAGAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGA 1725
consensus_11968#3 TGACCCCAGAGCATGTTGACAAAGGCCTTATTTATCCACCCTTTTCCTGCATCAGGAAGA 548
consensus_11968#1 TTACAGTAATAATTTGCGGTTGGACCTATATCGTACGGCAGTAGCATTTTATCCCTGAAC 645
consensus_11968#2 TACTAGTGTGCTTTGATGATCAAAACCCTGTCTCTCGGAAAT--CCTGGTAGTATGGTAC 629
* * * * * * * * *
consensus_11968#0 TATCAGCCAACATCGCAGCCCGCGTTGCTGCAAAAGCCTATGACCTTGGATTGGCTAGCC 1785
consensus_11968#3 TATCAGCCAACATCGCAGCCCGCGTTGCTG------------------------------ 578
consensus_11968#1 TGTGCTTGTACATATTTGCCTGTTAAGGTTCAGTTATGTCCTGA-TTGTGTGTCATC-TG 703
consensus_11968#2 CATGGTTGTTTAAAAC-ACAGGCAACAACCAACAGATATCTGGA-TGAAGCGGTATGATT 687
* * * *
consensus_11968#0 ATCTCCCTCGCCCAAAAGACTTGGTGAAGTACGCTGAGAGCTGCATGTACAGCCCCATTT 1845
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 AAACTTGGGAGCTGCGTAATCCCCAGAAGGATTTTGGAAGCAGATTTGTCTTCTCCGCCC 763
consensus_11968#2 AAATATCGTTACTATTGCTTATCCTGCAG--CCATGGTAT--GGTGTAGCAAACCAACTA 743
consensus_11968#0 ACCGTTCTTATAGATGAAGTGATGCTCACCTTAGTGTACAGCTTCATTTGGCTACAGCAT 1905
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 TGAACAGCCAGCCTATGTTGGACTCACAGGCAGCACAGAGAGCAATCGTCCACGTATAAC 823
consensus_11968#2 CAACT--CTACCATATGTTTG--CGACAGCAACCAAAGA--------------------- 778
consensus_11968#0 GCTGTCTTGTATTACAGTAATAATTTGCGGTTGGACCTATATCGTACGGCAGTAGCATTT 1965
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 CTGGAAACAAACTGTGAGCTTTGGAAGGAGCGCCACGGAGTGCAAGACCAGTTGCATTGT 883
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 TATCCCTGAACTGTGCTTGTACATATTTGCCCTGTCATCATGTAATAAATAACCCAAGTC 2025
consensus_11968#3 ------------------------------------------------------------
consensus_11968#1 ACACTGTCATCATCTCTTGCCCACAGCTGAA----------------------------- 914
consensus_11968#2 ------------------------------------------------------------
consensus_11968#0 TGCTATTGCAGAATTTGGTTCAGTATGATTTTACTTTGTAAAAA 2069
consensus_11968#3 --------------------------------------------
consensus_11968#1 --------------------------------------------
consensus_11968#2 --------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||