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Oryza sativa
cluster # 11991 cluster # 11991       Sequences # 9       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11991#0 length = 1263 sequences # 7  
consensus_11991#1 length = 616 sequences # 1  
consensus_11991#2 length = 490 sequences # 1  

consensusID : consensus_11991#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1263
fasta sequence
                              [ACTGCCATGGACTGAAGGAGTAGAACGTCTCACCGCCGCATCCCGCTCGCCGGTCACCGGCTAGACGCCGCCGTCGCGCGGGCTCCTGGGTTGCCGTGTCTCCATCGCTTCCTTGTTGGCCTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGATCGTGTGTCTGCCTCTCGGCTCGCTGCGCCGCCGCCGCCGCCGGCTCGTCCCGTCTGTGTGTGTGTTTGTGCAGTTGAAATTGGAGTAAATATACAATGAGGCTGTTGAAAGCGGATC-AGTTGTTCAGGAAAGTCATTGACGGCGGGTGGAGAAAGCAATCTCGACTGC-TTGGGCTTGACGTTGGTAGTAAGTATGTTGGGCTGGCTGTTTCCGACGACAAAAATAGGATCGCATTGCCTCTAAGTGTATTGAGCAGGACAAAGACAAACATCAGCTTGATGGCGGATGATTTCGTAACTTTGGTCTCAAAATACTCCCTTGCAGGCTTTGTTGTCGGCTATCCGTTCAACTTGCAGGGTCAATCTAGTCCAAATGCATTACAAGTAAGGCTTCTTGTTGGAGAGCTCTGTAAAACTGGGAAACTTGATGATATGAGTTACACCTATTGGGATGAAAATTTTACCTCGAAGTGTGTAGAAGCCCTTTTACATCCTCTGAAACTACATGACCCAGTTGAAACCAAAACAATGACAGATAAATTTGCTGCGGTTTGCATACTCCAGCGCTACCTAGATAATATGAACAGAGAATTGAGATCTGCAGATAATTCTGGAAAACAGGGTGACACCTGAGTTCCACAATGCATATATTATTCTGTTCGGTGCACACTAAACCAAAGACAACGGAATCAGCATCTGTTCGGTGTACTGCTGCCTTAGTGTACTGCTGCCTTATGAAAAAGGCTGTGCAGTTCATTGAGACATGTACAAAACCCTGAGTTTATGCTCTCGTATACGCCTGATAAGTTTTGTAGATGCAGACTTGCAGAGCTGACAATTCGTCAGCTAGCAAGGGCAGCTTCCCTGCCTGCCTGCTAGAGGCAATTTGTTGTAGGTGATGCACAAGTACTAGGAATCTTTTCCCCCTTCCTTTATTTTCTTGCTTATGAGGCCATTGGCACCGAAATGCCTGCTTATGCGCAGCTTGAACAATCTCTTCCAATATGATTGCCGAGCATGCGCGTGTGTATATGAGCCTCTATTGTGTTTCGGGAAAAAAAATGATTGCCGAGCCAAAAAAAAAAAAAAAAA]

[+] EMBL CF322215             [ACTGCCATGGACTGAAGGAGTAGAAAGTCTCACCTCCGCATCCCGCTCGCCGGTCACCGGCTAGACGCCGCCGTCGCGCGGGCTCCTGGGTTGCCGTGTCTCCATCGCTTCCTTGTTGGCCTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGATCGTGTGTCTGTCTCTCGGCTCGCTGCGCCGCCGCCGCCGCCGGCTCGTCCCGTCTGTGTGTGTGTTTGTGCAGTTGAAATTGGAGTAAATATACAATGAGGCTGTTGAAAGCGGATC AGTTGTTCAGGAAAGTCATTGACGGCGGGTGGAGAAAGCAATCTCGACTGC TTGGGCTTGACGTTGGTAGTAAGTATGTTGGGCTGGCTGTTTCCGACGACAAAAATAGGATCGCATTGCCTCTAAGCGTATTGAGCAGGACAAAGACAAACATCAGCTTGATGGCGGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF339524             [                 GAGTAGAA     AACCGCCGCATCCCGCTCGCCGGTCACCGGCTAGACGCCGCCGTCGCGCGGGCTCCTGGGTTGCCGTGTCTCCATCGCTTCCTTGTTGGCCTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGATCGTGTGTCTGCCTCTCGGCTCGCTGCGCCGCCGCCGCCGCCGGCTCGTCCCGTCTGTGTGTGTGTTTGTGCAGTTGAAATTGGAGTAAATATACAATGAGGCTGTTGAAAGCGGATC AGTTGTTCAGGAAAGTCATTGACGGCGGGTGGAGAAAGCAATCTCGACTGC TTGGGCTTGACGTTGGTAGTAAGTATGTTGGGCTGGCTGTTTCCGACGACAAAAATAGGATCGCATTGCCTCTAAGTGTATTGAGCAGGACAAAGACAAACATCAGCTTGATGGCGGATGATTTCGTAACTTTGGTCTCAAAATACTCCCTTGCAGGCTTTGTTGTCGGCTATCCGTTCAACTTGCAGGGTCAATCTAGTCCAAATGCATTACAAGTAAGGCTTCTTGTTGGAGAGCTCTGTAAAACTGGGAAACTTGATGATATGAGTTACACCTATTGGGATGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK071863             [                         CGTCTCACCGCCGCATCCCGCTCGCCGGTCACCGGCTAGACGCCGCCGTCGCGCGGGCTCCTGGGTTGCCGTGTCTCCATCGCTTCCTTGTTGGCCTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGATCGCGTGTCTGCCTCTCGGCTCGCTGCGCCGCCGCCGCCGCCGGCTCGTCCCGTCTGTGTGTGTGTTTGTGCAGTTGAAATTGGAGTAAATATACAATGAGGCTGTTGAAAGCGGATC AGTTGTTCAGGAAAGTCATTGACGGCGGGTGGAGAAAGCAATCTCGACTGC TTGGGCTTGACGTTGGTAGTAAGTATGTTGGGCTGGCTGTTTCCGACGACAAAAATAGGATCGCATTGCCTCTAAGTGTATTGAGCAGGACAAAGACAAACATCAGCTTGATGGCGGATGATTTCGTAACTTTGGTCTCAAAATACTCCCTTGCAGGCTTTGTTGTCGGCTATCCGTTCAACTTGCAGGGTCAATCTAGTCCAAATGCATTACAAGTAAGGCTTCTTGTTGGAGAGCTCTGTAAAACTGGGAAACTTGATGATATGAGTTACACCTATTGGGATGAAAATTTTACCTCGAAGTGTGTAGAAGCCCTTTTACATCCTCTGAAACTACATGACCCAGTTGAAACCAAAACAATGACAGATAAATTTGCTGCGGTTTGCATACTCCAGCGCTACCTAGATAATATGAACAGAGAATTGAGATCTGCAGATAATTCTGGAAAACAGGGTGACACCTGAGTTCCACAATGCATATATTATTCTGTTCGGTGCACACTAAACCAAAGACAACGGAATCAGCATCTGTTCGGTGTACTGCTGCCTTAGTGTACTGCTGCCTTATGAAAAAGGCTGTGCAGTTCATTGAGACATGTACAAAACCCTGAGTTTATGCTCTCGTATACGCCTGATAAGTTTTGTAGATGCAGACTTGCAGAGCTGACAATTCGTCAGCTAGCAAGGGCAGCTTCCCTGCCTGCCTGCTAGAGGCAATTTGTTGTAGGTGATGCACAAGTACTAGGAATCTTTTCCCCCTTCCTTTATTTTCTTGCTTATGAGGCCATTGGCACCGAAATGCCTGCTTATGCGCAGCTTGAACAATCTCTTCCAATATGATTGCCGAGCATGCGCGTGTGTATATGAGCCTCTATTGTGTTTCGGGAAAAAAAATGATTGCCGAG                   ]
[+] EMBL CF328685             [                        cCGTCTCACCGCCGCATCCCTCTCGCCGGTCACCGGCTAGACGCCGCCGTCGCGCGGGCTCCTGGGTTGCCGTGTCTCCATCGCTTCCTTGTTGGCCTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGATCGTGTGTCTGCCTCTCGGCTCGCTGCGCCGCCGTCGCCGCCGGCTCGTCCCGTCTGTGTGTGTGTTTGTGCAGTTGAAATTGGAGTAAATATACAATGAGGCTGTTGAGAGCGGATC AGTTGTTCAGGAAAGTCATTGACGGCGGGTGGAGAAAGCAATCTCGACTGC TTGGGCTTGACGTTGGTAGTAAGTACGTTGGGCTGGCTGTTTCCGACGACAAAAATAGGATCGCATTGCCTCTAAGTGTATTGAGCAGGACAAAGACAAACATCAGCTTGATGGCGGATGATTTCGTAACTTTGGTCTCAAAATACTCCCTTGCAGGCTTTGTTGTCGGCTATCCGTTCAACTTGCAGGGTCAATCTAGTCCAAATGCATTACAAGTAAGTCTTCTTGTTGGAGAGCTCTGTAAAACTGGGAAACTTGATGATATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C74473               [                                         CCCGCTCGCCGGTCACCGGCTAGACGCCGCCGTCGCGCGGGCTCCTGGGTTGCCGTGTCTCCATCGCTTCCTTGTTGGCCTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGATCGTGTGTNTGCCTCTCGGCTCGCTGCGCCGCCGCCGCCGCCGGCTCGTCCCGTCTGTGTGTGTNTATGTGCAGTTGAAATTGGAGTNAATATACAATGAGGCTGTTGAAAGCGGATCAAGTTGTTCAGGAAAGTCATTNACGGCGGGTGGAAAAAGCAATCTCGACTGCTTTGGGCTTtaacg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CF328686             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CTGTTCGGTGTACTGCTGCCTTAGTGTACTGCTGCCTTATGAAAAAGGCTGTGCAGTTCATTGAGACATGTACAAAACTCTGAGTTTATGCTTTGGTATACGCCTGATAAGTTTTGTAGATGCAGACTTGCAGAGCTGACAATTCGTCAGCTAGCAAGGGCAGTTTCCCTGCCTGCCTGTTAGAGGCAATTTGTTGTAGGTGATGCACAAGTATTAGGAATCTTTTCCCCCTTCCTTTATTTTCTTGC TATGAGGCCATTGGCACCGAAATGCCTGTTTATGCGCAGCTTGAACAATTTTTTCCAATATGATTGCCGAGCATGGGGGTGTGTATATGAGCCTCTATTGTGTTTCGGGAAAAAAAATGATTGCCGAGCCAAAAAAAAAAAAAAAAA]
[+] EMBL AU029724             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTGCCTGCCTGCTAGAGGCAATTTGTTGTAGGTGATGCACAAGTACTAGGAATCTTTTCCCCCTTCCTTTATTTTCTTGCTTATGAGGCCATTGGCACCGAAATGCCTGCTTATGCGCAGCTTGAACAATCTCTTCCAATATGATTGCCGAGCATGCGCGTGTGTATATGAGCCTCTATTGTGTTTCGGGAAAAAAAATGATTGCCGAGCCAAGAAGATGCAAAAA  ]


>consensus_11991#0 ACTGCCATGGACTGAAGGAGTAGAACGTCTCACCGCCGCATCCCGCTCGCCGGTCACCGG CTAGACGCCGCCGTCGCGCGGGCTCCTGGGTTGCCGTGTCTCCATCGCTTCCTTGTTGGC CTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGATCGTGTGTC TGCCTCTCGGCTCGCTGCGCCGCCGCCGCCGCCGGCTCGTCCCGTCTGTGTGTGTGTTTG TGCAGTTGAAATTGGAGTAAATATACAATGAGGCTGTTGAAAGCGGATCAGTTGTTCAGG AAAGTCATTGACGGCGGGTGGAGAAAGCAATCTCGACTGCTTGGGCTTGACGTTGGTAGT AAGTATGTTGGGCTGGCTGTTTCCGACGACAAAAATAGGATCGCATTGCCTCTAAGTGTA TTGAGCAGGACAAAGACAAACATCAGCTTGATGGCGGATGATTTCGTAACTTTGGTCTCA AAATACTCCCTTGCAGGCTTTGTTGTCGGCTATCCGTTCAACTTGCAGGGTCAATCTAGT CCAAATGCATTACAAGTAAGGCTTCTTGTTGGAGAGCTCTGTAAAACTGGGAAACTTGAT GATATGAGTTACACCTATTGGGATGAAAATTTTACCTCGAAGTGTGTAGAAGCCCTTTTA CATCCTCTGAAACTACATGACCCAGTTGAAACCAAAACAATGACAGATAAATTTGCTGCG GTTTGCATACTCCAGCGCTACCTAGATAATATGAACAGAGAATTGAGATCTGCAGATAAT TCTGGAAAACAGGGTGACACCTGAGTTCCACAATGCATATATTATTCTGTTCGGTGCACA CTAAACCAAAGACAACGGAATCAGCATCTGTTCGGTGTACTGCTGCCTTAGTGTACTGCT GCCTTATGAAAAAGGCTGTGCAGTTCATTGAGACATGTACAAAACCCTGAGTTTATGCTC TCGTATACGCCTGATAAGTTTTGTAGATGCAGACTTGCAGAGCTGACAATTCGTCAGCTA GCAAGGGCAGCTTCCCTGCCTGCCTGCTAGAGGCAATTTGTTGTAGGTGATGCACAAGTA CTAGGAATCTTTTCCCCCTTCCTTTATTTTCTTGCTTATGAGGCCATTGGCACCGAAATG CCTGCTTATGCGCAGCTTGAACAATCTCTTCCAATATGATTGCCGAGCATGCGCGTGTGT ATATGAGCCTCTATTGTGTTTCGGGAAAAAAAATGATTGCCGAGCCAAAAAAAAAAAAAA AAA



consensusID : consensus_11991#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 616
fasta sequence
                              [ATCCGTTCAACTTGCAGGGTCAATCTAGTCCAAATGCATTACAAGTAAGGCTTCTTGTTGGAGAGCTCTGTAAAACTGGGAAACTTGATGATATGAGTTACACCTATTGGGATGAAAATTTTACCTCGAAGTGTGTAGAAGCCCTTTTACATCCTCTGAAACTACATGACCCAGTTGAAACCAAAACAATGACAGATAAATTTGCTGCGGTTTGCACACTCCAGCGCTACCTAGATAATATGAACAGAGAATTGAGATCTGCAGATAATTCTGGAAAACAGGGTGACACCTGAGTTCCACAATGCATATATTATTCTGTTCGGTGCACACTAAACCAAAGACAACGGAATCAGCATCTGTTCGGTGTACTGCTGCCTTAGTGTACTGCTGCCTTATGAAAAAGGCTGTGCAGTTCATTGAGACATGTACAAAACTCTGAGTTTATGCTATAGTATACGCCTGATAAGTTTTGTAGATGCAGACTTGCAGAGCTGACAATTCGTCAGCTAGCAAGGGCAGCTTCCCTGCCTGCCTGCTAGAGGCAATTTGTTGTAGGTGATGCACAAGTACTAGGAATCTTTTCCCCCTTCCTTTAAAAAAAAAAAAAAAAAACACT]

[-] EMBL CF322216             [ATCCGTTCAACTTGCAGGGTCAATCTAGTCCAAATGCATTACAAGTAAGGCTTCTTGTTGGAGAGCTCTGTAAAACTGGGAAACTTGATGATATGAGTTACACCTATTGGGATGAAAATTTTACCTCGAAGTGTGTAGAAGCCCTTTTACATCCTCTGAAACTACATGACCCAGTTGAAACCAAAACAATGACAGATAAATTTGCTGCGGTTTGCACACTCCAGCGCTACCTAGATAATATGAACAGAGAATTGAGATCTGCAGATAATTCTGGAAAACAGGGTGACACCTGAGTTCCACAATGCATATATTATTCTGTTCGGTGCACACTAAACCAAAGACAACGGAATCAGCATCTGTTCGGTGTACTGCTGCCTTAGTGTACTGCTGCCTTATGAAAAAGGCTGTGCAGTTCATTGAGACATGTACAAAACTCTGAGTTTATGCTATAGTATACGCCTGATAAGTTTTGTAGATGCAGACTTGCAGAGCTGACAATTCGTCAGCTAGCAAGGGCAGCTTCCCTGCCTGCCTGCTAGAGGCAATTTGTTGTAGGTGATGCACAAGTACTAGGAATCTTTTCCCCCTTCCTTTAAAAAAAAAAAAAAAAAACACT]


>consensus_11991#1 ATCCGTTCAACTTGCAGGGTCAATCTAGTCCAAATGCATTACAAGTAAGGCTTCTTGTTG GAGAGCTCTGTAAAACTGGGAAACTTGATGATATGAGTTACACCTATTGGGATGAAAATT TTACCTCGAAGTGTGTAGAAGCCCTTTTACATCCTCTGAAACTACATGACCCAGTTGAAA CCAAAACAATGACAGATAAATTTGCTGCGGTTTGCACACTCCAGCGCTACCTAGATAATA TGAACAGAGAATTGAGATCTGCAGATAATTCTGGAAAACAGGGTGACACCTGAGTTCCAC AATGCATATATTATTCTGTTCGGTGCACACTAAACCAAAGACAACGGAATCAGCATCTGT TCGGTGTACTGCTGCCTTAGTGTACTGCTGCCTTATGAAAAAGGCTGTGCAGTTCATTGA GACATGTACAAAACTCTGAGTTTATGCTATAGTATACGCCTGATAAGTTTTGTAGATGCA GACTTGCAGAGCTGACAATTCGTCAGCTAGCAAGGGCAGCTTCCCTGCCTGCCTGCTAGA GGCAATTTGTTGTAGGTGATGCACAAGTACTAGGAATCTTTTCCCCCTTCCTTTAAAAAA AAAAAAAAAAAACACT



consensusID : consensus_11991#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 490
fasta sequence
                              [CGCTTCCTTGTTGGCCTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGATCGTGTGTCTGCCTCTCGGCTCGCTGCGCCGCCGCCGCCGCCGGCTCGTCCCGTCTGTGTGTGTGTTTGTGCAGTTGAAATTGGAGTAAATATACAATGAGGCTGTTGAAAGCGGATCAGTTGTTCAGGAAAGTCATTGACGGCGGGTGGAGAAAGCAATCTCGACTGCTTGGGCTTGACGTTGGTAGTAAGTATGTTGGGCTGGCTGTTTCCGACGACAAAAATAGGATCGCATTGCCTCTAAGGTATGCACTTCAAACTATTGTAGCTGAATATTGTGTTCCTTGATCCAAAGGTTTCACTGAGATAGTGAGATGTTTCCAGAACATATTTAGCACAAGTGATTCCAGTGTGTCCATAAAAATTAGAACATCACTTTCTATGTGATGATTTAAATGCAGGCGGTTCTATATTCCATTCCTCT]

[+] EMBL CF305647             [CGCTTCCTTGTTGGCCTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGATCGTGTGTCTGCCTCTCGGCTCGCTGCGCCGCCGCCGCCGCCGGCTCGTCCCGTCTGTGTGTGTGTTTGTGCAGTTGAAATTGGAGTAAATATACAATGAGGCTGTTGAAAGCGGATCAGTTGTTCAGGAAAGTCATTGACGGCGGGTGGAGAAAGCAATCTCGACTGCTTGGGCTTGACGTTGGTAGTAAGTATGTTGGGCTGGCTGTTTCCGACGACAAAAATAGGATCGCATTGCCTCTAAGGTATGCACTTCAAACTATTGTAGCTGAATATTGTGTTCCTTGATCCAAAGGTTTCACTGAGATAGTGAGATGTTTCCAGAACATATTTAGCACAAGTGATTCCAGTGTGTCCATAAAAATTAGAACATCACTTTCTATGTGATGATTTAAATGCAGGCGGTTCTATATTCCATTCCTCT]


>consensus_11991#2 CGCTTCCTTGTTGGCCTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGAT CCGGGATCGTGTGTCTGCCTCTCGGCTCGCTGCGCCGCCGCCGCCGCCGGCTCGTCCCGT CTGTGTGTGTGTTTGTGCAGTTGAAATTGGAGTAAATATACAATGAGGCTGTTGAAAGCG GATCAGTTGTTCAGGAAAGTCATTGACGGCGGGTGGAGAAAGCAATCTCGACTGCTTGGG CTTGACGTTGGTAGTAAGTATGTTGGGCTGGCTGTTTCCGACGACAAAAATAGGATCGCA TTGCCTCTAAGGTATGCACTTCAAACTATTGTAGCTGAATATTGTGTTCCTTGATCCAAA GGTTTCACTGAGATAGTGAGATGTTTCCAGAACATATTTAGCACAAGTGATTCCAGTGTG TCCATAAAAATTAGAACATCACTTTCTATGTGATGATTTAAATGCAGGCGGTTCTATATT CCATTCCTCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11991#0      ACTGCCATGGACTGAAGGAGTAGAACGTCTCACCGCCGCATCCCGCTCGCCGGTCACCGG 60
consensus_11991#1      ------------------------------------------------------------
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      CTAGACGCCGCCGTCGCGCGGGCTCCTGGGTTGCCGTGTCTCCATCGCTTCCTTGTTGGC 120
consensus_11991#1      ------------------------------------------------------------
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      CTGTTCCTGCGAGCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGATCGTGTGTC 180
consensus_11991#1      ------------------------------------------------------------
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      TGCCTCTCGGCTCGCTGCGCCGCCGCCGCCGCCGGCTCGTCCCGTCTGTGTGTGTGTTTG 240
consensus_11991#1      ------------------------------------------------------------
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      TGCAGTTGAAATTGGAGTAAATATACAATGAGGCTGTTGAAAGCGGATCAGTTGTTCAGG 300
consensus_11991#1      ------------------------------------------------------------
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      AAAGTCATTGACGGCGGGTGGAGAAAGCAATCTCGACTGCTTGGGCTTGACGTTGGTAGT 360
consensus_11991#1      ------------------------------------------------------------
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      AAGTATGTTGGGCTGGCTGTTTCCGACGACAAAAATAGGATCGCATTGCCTCTAAGTGTA 420
consensus_11991#1      ------------------------------------------------------------
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      TTGAGCAGGACAAAGACAAACATCAGCTTGATGGCGGATGATTTCGTAACTTTGGTCTCA 480
consensus_11991#1      ------------------------------------------------------------
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      AAATACTCCCTTGCAGGCTTTGTTGTCGGCTATCCGTTCAACTTGCAGGGTCAATCTAGT 540
consensus_11991#1      -------------------------------ATCCGTTCAACTTGCAGGGTCAATCTAGT 29
consensus_11991#2      ---------------------------------------------------CGCTTCCTT 9
                                                                          *  *    *

consensus_11991#0      CCAAATGCATTACAAGTAAGGCTTCTTGTTGGAGAGCTCTGTAAAACTGGGAAACTTGAT 600
consensus_11991#1      CCAAATGCATTACAAGTAAGGCTTCTTGTTGGAGAGCTCTGTAAAACTGGGAAACTTGAT 89
consensus_11991#2      GTTGGCCTGTTCCTGCGA--GCTTCGCCCTCTGGCTTCCTCCCTGTTCGGGATCCGGGAT 67
                                ** *    *  *****    *   *    **        ****  *  ***

consensus_11991#0      GATATGAGTTACACCTATTGGGATGAAAATTTTACCTCGAAGTGTGTAGAAGCCCTTTTA 660
consensus_11991#1      GATATGAGTTACACCTATTGGGATGAAAATTTTACCTCGAAGTGTGTAGAAGCCCTTTTA 149
consensus_11991#2      CGTGTG---TCTGCCTCTCGG---------CTCGCTGCGCCGC-CGCCGCCGCCGGCTCG 114
                         * **   *   *** * **          *  *  **  *   *  *  ***   *  

consensus_11991#0      CATCCTCTGAAACTACATG-ACCCAGTTGAAACCAAAACAATGACAGATAAATTTGCTGC 719
consensus_11991#1      CATCCTCTGAAACTACATG-ACCCAGTTGAAACCAAAACAATGACAGATAAATTTGCTGC 208
consensus_11991#2      TCCCGTCTGTGTGTGTGTTTGTGCAGTTGAAATTGGAGTAA--ATATACAATGAGGCTGT 172
                          * ****    *   *     *********    *  **  * * * **    **** 

consensus_11991#0      GGTTTGCATACTCCAGCGCTACCTAGATAATATGAACAGAGAATTGAGATCTGCAGATAA 779
consensus_11991#1      GGTTTGCACACTCCAGCGCTACCTAGATAATATGAACAGAGAATTGAGATCTGCAGATAA 268
consensus_11991#2      TGAAAGCGGA--TCAGTTGTTCAGGAAAGTCATTGACGGCGGGTGGAGA-----AAGCAA 225
                        *   **  *   ***   * *    *    **  ** * *  * ****     *   **

consensus_11991#0      TTCTGGAAAACAGGGTGACACCTGAGTTCCACAATGCATATATTATTCTGTTCGGTGCAC 839
consensus_11991#1      TTCTGGAAAACAGGGTGACACCTGAGTTCCACAATGCATATATTATTCTGTTCGGTGCAC 328
consensus_11991#2      TCTCGACTGCTTGGG-----CTTGACGTTGGTAGTAAGTATGTTGGGCTGGCTGTTTCCG 280
                       *   *       ***     * ***  *    * *   *** **   ***   * * *  

consensus_11991#0      ACTAAACCAAAGACAACGGAAT-----CAGCATCTGTTCGGTGTACTGCTGC--CTTAGT 892
consensus_11991#1      ACTAAACCAAAGACAACGGAAT-----CAGCATCTGTTCGGTGTACTGCTGC--CTTAGT 381
consensus_11991#2      ACGACAAAAATAGGATCGCATTGCCTCTAAGGTATGCACTTCAAACTATTGTAGCTGAAT 340
                       ** * *  **    * ** * *      *   * **  *     ***  **   ** * *

consensus_11991#0      GTACTGCTGCCTTATGAAAAAGGCTGTGCAGTTCATTGAGACATGTACAAAACCC--TGA 950
consensus_11991#1      GTACTGCTGCCTTATGAAAAAGGCTGTGCAGTTCATTGAGACATGTACAAAACTC--TGA 439
consensus_11991#2      ATTGTGTTCCTTGATCCAAAGGTTTCACTGAGATAGTGAGATGTTTCCAGAACATATTTA 400
                        *  ** * * * **  *** *  *         * *****  * * ** ***    * *

consensus_11991#0      GTTTATGCTCTCGTA-TACGCCTGATAAGTTTTGTAGATGCAGACTTGCAGAGCTGACAA 1009
consensus_11991#1      GTTTATGCTATAGTA-TACGCCTGATAAGTTTTGTAGATGCAGACTTGCAGAGCTGACAA 498
consensus_11991#2      GCACAAGTGATTCCAGTGTGTCCATAAAAATTAGAACAT---CACTTTCTATG-TGATGA 456
                       *   * *   *   * *  * *    **  ** * * **    **** *   * ***  *

consensus_11991#0      TTCGTCAGCTAGCAAGGGCAGCTTCCCTGCCTGCCTGCTAGAGGCAATTTGTTGTAGGTG 1069
consensus_11991#1      TTCGTCAGCTAGCAAGGGCAGCTTCCCTGCCTGCCTGCTAGAGGCAATTTGTTGTAGGTG 558
consensus_11991#2      TTTAAATGCAGGCGGTTCTATATTCCATTCCTCT-------------------------- 490
                       **     **  **      *  **** * ***                            

consensus_11991#0      ATGCACAAGTACTAGGAATCTTTTCCCCCTTCCTTTATTTTCTTGCTTATGAGGCCATTG 1129
consensus_11991#1      ATGCACAAGTACTAGGAATCTTTTCCCCCTTCCTTTAAAAAAAAAAAAAAAAAACACT-- 616
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      GCACCGAAATGCCTGCTTATGCGCAGCTTGAACAATCTCTTCCAATATGATTGCCGAGCA 1189
consensus_11991#1      ------------------------------------------------------------
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      TGCGCGTGTGTATATGAGCCTCTATTGTGTTTCGGGAAAAAAAATGATTGCCGAGCCAAA 1249
consensus_11991#1      ------------------------------------------------------------
consensus_11991#2      ------------------------------------------------------------
                                                                                   

consensus_11991#0      AAAAAAAAAAAAAA 1263
consensus_11991#1      --------------
consensus_11991#2      --------------
                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)