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Oryza sativa
cluster # 11992 cluster # 11992       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11992#0 length = 2133 sequences # 8  
consensus_11992#1 length = 421 sequences # 1  

consensusID : consensus_11992#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2133
fasta sequence
                              [TGCATTTCGTCCCTGTTCTGCCGCCGACGAGCGACGATGCGGCGCCTCCTCCTCGCCGGCATCCTCCGCCGCGCCTCCTCCTCCCCTTCCTCCCACCACCACCTCCACCTTGTCAGGGCGCTCTCCGCCTCGTCCCCGCTCCCGGCCTCCGACGCCGACCTCCGCAAGTACGCCGGCTACGCGCTCCTCCTCCTCGGCTGCGGCGCCGCCACCTACTACTCCTTCCCGCTTCCCCCCGACGCGCTCCACAAGAAGGCCGTCCCCTTCAAGTACGCGCCGCTCCCCGACGACCTCCACGCCGTCTCCAACTGGAGCGCCACCCACGAGGTCCACACCCGCGTCCTCCTCCAGCCCGACTCCCTCCCCGCCCTCCACGACGCGCTCGCCGCCGCCCACGGCGAGTGCCGCAAGCTCAGGCCCCTCGGCTCGGGCCTGTCCCCCAATGGCCTCGCGCTCTCCCGCGCCGGCATGGTCAACCTCGCGCTCATGGACAAGGTGCTCGGCGTCGACGCCAAGAAGAAGACCGTCACCGTGCAGGCCGGGATACGCGTCGCCGAGCTTGTCGACGCGCTCCGGGAGCATGGTCTCACGCTGCAGAACTTCGCGTCCATTCGGGAGCAGCAGGTCGGCGGCATCATTCAGGTTGGTGCCCATGGCACTGGTGCAAGATTGCCACCAATTGATGAACAAGTTATTAGCATGAAATTGGTTACCCCTGCCAAGGGGACAATAGAGTTGTCAAGGGAGAAGGATCCTGATTTATTCTATCTTGCTCGCTGTGGACTTGGTGGCCTTGGAGTTGTAGCAGAAGTTACTCTTCAATGTGTGGAAAGACACCAACTTATTGAACACACTTTCGTTTCCAATGCAGACGAAGTCAAGAAAAATCACAAGAAATGGCTCTCTGAAAATAAACATATTAAGTACTTATGGATTCCATACACCGATACAGTTGTTGTTGTCCAATGCAATCCTCCTTCAAGGTGGAGAACTCCAAAGTTTACCTCAAAATATGGAAAGGATGAGGCTATACAACATGTTCGTGATCTTTATCATGAGTCATTGAAGAAATATAGAACTAAAGCAGAAAGTAATGACCCAGAAGTAGATCAGCTTTCATTCACTGAATTGAGGGATCGGTTGCTTACCCTGGATCCTCTAGACAAAGATCATGTGATCAGAATTAACAAAGCAGAAGCTGAATATTGGAAGAAGTCAGAGGGTTATCGCATGGGCTGGAGTGACGAAATATTAGGCTTTGATTGTGGTGGGCAGCAGTGGGTTTCTGAAACTTGCTTCCCTGCAGGGACCCTAGCAAAGCCTAATATGAAGGATCTGGATTATATAGAGGAGCTGCTGCAGTTGATTGAGAAGGAAGATATACCCGCACCAGCACCTATTGAGCAGCGTTGGACTGCCTGCAGCAGGAGTCCCATGAGCCCAGCATCAAGCTCTCAAGAAGATGACATATTTTCATGGGTTGGGATAATAATGTACCTCCCAACGTCGGATGCTCGCCAAAGGGAGGAAATTACAGAGGAATTTTTTAATTACAGAAGTAAGACGCAAACAAATCTATGGGATGGTTATTCTGCATATGAACACTGGGCCAAAATTGAGGTTCCTAAGGATAAGGATGAACTCGCTGAACTCCAGGCTAGGTTGAGGAAACGTTTCCCAGTAGATGCATATAACAAAGCACGCATGGAGCTTGACCCTAACAAGGTTCTTTCCAATGCAAAGTTAGAGAAGCTCTTCCCAGTAACAGAGGTCCAACATGAAAAGTAAGGTTGTGCTGATTGTTGACATGTTTGAAGACATGTCGGGGATACTTAAATCAATAGCCAAAACTACAATTCTGGTGGTTTCTCGTTACATAACCGGATATGAAGAGTTAAATTCTTTGTAGAACGTGGTCTGTTGCTGGAGAAGGGTTTTAGTGCTCCTCCTCTTGGATCAGTGCTTAGTACTGAACTGACGCGTTTGTTGCTGGAGGCTTTTATACTTGGGAACATCCATGCCTATTATGAGACTAAATGGTCTGTTTTATCAAGAGAAATGGCATGTAACCTTTTGCAGCAGAAATAAAGTGCGTGAAATAACAATTTGATGCGCTTCAAGAAATTAAAGATT]

[+] EMBL AK102697             [TGCATTTCGTCCCTGTTCTGCCGCCGACGAGCGACGATGCGGCGCCTCCTCCTCGCCGGCATCCTCCGCCGCGCCTCCTCCTCCCCTTCCTCCCACCACCACCTCCACCTTGTCAGGGCGCTCTCCGCCTCGTCCCCGCTCCCGGCCTCCGACGCCGACCTCCGCAAGTACGCCGGCTACGCGCTCCTCCTCCTCGGCTGCGGCGCCGCCACCTACTACTCCTTCCCGCTTCCCCCCGACGCGCTCCACAAGAAGGCCGTCCCCTTCAAGTACGCGCCGCTCCCCGACGACCTCCACGCCGTCTCCAACTGGAGCGCCACCCACGAGGTCCACACCCGCGTCCTCCTCCAGCCCGACTCCCTCCCCGCCCTCCACGACGCGCTCGCCGCCGCCCACGGCGAGTGCCGCAAGCTCAGGCCCCTCGGCTCGGGCCTGTCCCCCAATGGCCTCGCGCTCTCCCGCGCCGGCATGGTCAACCTCGCGCTCATGGACAAGGTGCTCGGCGTCGACGCCAAGAAGAAGACCGTCACCGTGCAGGCCGGGATACGCGTCGCCGAGCTTGTCGACGCGCTCCGGGAGCATGGTCTCACGCTGCAGAACTTCGCGTCCATTCGGGAGCAGCAGGTCGGCGGCATCATTCAGGTTGGTGCCCATGGCACTGGTGCAAGATTGCCACCAATTGATGAACAAGTTATTAGCATGAAATTGGTTACCCCTGCCAAGGGGACAATAGAGTTGTCAAGGGAGAAGGATCCTGATTTATTCTATCTTGCTCGCTGTGGACTTGGTGGCCTTGGAGTTGTAGCAGAAGTTACTCTTCAATGTGTGGAAAGACACCAACTTATTGAACACACTTTCGTTTCCAATGCAGACGAAGTCAAGAAAAATCACAAGAAATGGCTCTCTGAAAATAAACATATTAAGTACTTATGGATTCCATACACCGATACAGTTGTTGTTGTCCAATGCAATCCTCCTTCAAGGTGGAGAACTCCAAAGTTTACCTCAAAATATGGAAAGGATGAGGCTATACAACATGTTCGTGATCTTTATCATGAGTCATTGAAGAAATATAGAACTAAAGCAGAAAGTAATGACCCAGAAGTAGATCAGCTTTCATTCACTGAATTGAGGGATCGGTTGCTTACCCTGGATCCTCTAGACAAAGATCATGTGATCAGAATTAACAAAGCAGAAGCTGAATATTGGAAGAAGTCAGAGGGTTATCGCATGGGCTGGAGTGACGAAATATTAGGCTTTGATTGTGGTGGGCAGCAGTGGGTTTCTGAAACTTGCTTCCCTGCAGGGACCCTAGCAAAGCCTAATATGAAGGATCTGGATTATATAGAGGAGCTGCTGCAGTTGATTGAGAAGGAAGATATACCCGCACCAGCACCTATTGAGCAGCGTTGGACTGCCTGCAGCAGGAGTCCCATGAGCCCAGCATCAAGCTCTCAAGAAGATGACATATTTTCATGGGTTGGGATAATAATGTACCTCCCAACGTCGGATGCTCGCCAAAGGAAGGAAATTACAGAGGAATTTTTTAATTACAGAAGTAAGACGCAAACAAATCTATGGGATGGTTATTCTGCATATGAACACTGGGCCAAAATTGAGGTTCCTAAGGATAAGGATGAACTCGCTGAACTCCAGGCTAGGTTGAGGAAACGTTTCCCAGTAGATGCATATAACAAAGCACGCATGGAGCTTGACCCTAACAAGGTTCTTTCCAATGCAAAGTTAGAGAAGCTCTTCCCAGTAACAGAGGTCCAACATGAAAAGTAAGGTTGTGCTGATTGTTGACATGTTTGAAGACATGTCGGGGATACTTAAATCAATAGCCAAAACTACAATTCTGGTGGTTTCTCGTTACATAACCGGATATGAAGAGTTAAATTCTTTGTAGAACGTGGTCTGTTGCTGGAGAAGGGTTTTAGTGCTCCTCCTCTTGGATCAGTGCTTAGTACTGAACTGACGCGTTTGTTGCTGGAGGCTTTTATACTTGGGAACATCCATGCCTATTATGAGACTAAATGGTCTGTTTTATCAAGAGAAATGGCATGTAACCTTTTGCAGCAGAAATAAAGTGCGTGAAATAACAATTTGATGCGCTTCAAGAAATTAAAGATT]
[+] EMBL OSR3380A             [          CCCTGTTCTGCCGCCGACGAGCGACGATGCGGCGCCTCCTCCTCGCCGGCATCCTCCGCCGCGCCTCCTCCTCCCCTTCCTCCCACCACCACCTCCACCTTGTAAGGGCGCTCTCCGCCTCGTCCCCGCTCCCGGCCTCCNACGCCGACCTCCGCAAGTACGCCGGCTACGCGCTCCTCCTCCTCGGCTGCGGCGCCGCCACCTACTACTCCTTCCCGCTTCCCCCCGACGCGCTCCACAAGAAGGCCGTCCCCTTCAAGTACGCGCCGCTCCCCGACGACCTCCACGNCGTCTCCAACTGGAGCGCCACCCACGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OSR06421A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAGGGTTATCGCATGGGCTGGAGTNACGAAATATTAGGCTTTGATTGTGGTGGGCAGCAGTGGGTTTCTGAAACTTGCTTCCCTGCAGGGACCCTAGCAAAGCCTAATATGAAGGATCTGGATTATATAGAGGAGCTGCTGCAGTTGATTGAGAAGGAAGATATACCCGCACCGGCACCTATTGAGCAGCGTTGGACTGCCTGCAGCAGGAGTCCCATGAGCCCAGCATCAAGCTCTCAAGAAGATGACATATTTTCATGGGTTGGGATAATAATGTACCTCCCAACGTCGGATGCTCGCCAAAGGCAGG AATTACAGAGGAATTTTTTAATTACAGAAGTAAGNCGCAAACAAATCTATGGG TGGTTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CA759978             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         cgagaCAAGGGGAGGAAATTACAGAGGAATTTTTTAATTACAGAAGTAAGACGCAAACAAATCTATGGGATGGTTATTCTGCATATGAACACTGGGCCAAAATTGAGGTTCCTAAGGATAAGGATGAACTCGCTGAACTCCCGGCTAGGTTGAGGAAACGTTTCCCCGTAGATGCATATAACAAAGCACGCATGGAGCTTGACCCTAACAAGGTTCTTTCCAATGCAAAGTTAGAGAAGCTCTTCCCAGTAACAGAGGTCCAACATGAAAAGTAAGGTTGTGCTGATTGTTGACATGTTTGAAGACATGTCGGGGATACTTAAATCAATAGCCGAAACTACAATTCTGGTGGTTTCTCGTTACATAACCGGATATGAAGAGTTAAATTCTTTGTAGAACGTGGTCTGTTGCTGGAGAAGGGTTTTAGTGCTCCTCCTCTTGGATCAGTGCTTAGTACTGAACTGACGCGTTTGTTGCTAGAGGCTTTTATACTTGGGAACATCCATGCCTATTATGAGACTAAATGGTCTGTTTTATCAAGAGAAATGGCATGTAACCTTTTGCAGCAGAAATAAAGTGCGTGAAATAACAATTTGATGCGCTTCAAGAAAAAAAAaaaa]
[-] EMBL CA760354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAGGGGAGGAAATCACAGAGGAATTTCTTAATGACAGAAGTAAGACGCAAACAAATCTGTGGGATGGTTATTCTGCATATGAACACTGGGCCAAAACTGAGGTTCCGAAGGATAAGGATGAACTCACTGAACTCCAGGCTAGGTTGAGGAAACGTTTCCCAGTAGATGCATATAACAAAGCACGCATGGAGCTTGACCCTAACAAGGTTCTTTCCAATGCAAAGTTAGAGAAGCTCTTCCCAGTAACAGAGGTCCAACATGTAAAGTAAGGTTGTGCTGATTGTTGACATGTTTGAAGACATGTCGGGGATACTTAAATCAATAGCCAAAACTACAATTCTGGTGGTTTCTCGTTACATAACCGGATATGAAGAGTTAAATTCTTCGTAGAACGTGGTCTGTTGCTGGAGAAGGGTTTTAGTG   CTCCTCTTGGATCAGTGCTTAGTACTGAACTGACGCGTTTGTTGCTGGAGGCTTTTATACTTGGGAACATCCATGCCTGTTATGAGACTAAATGGTCTGTTTTATCAAGAGAAACGGCATGTAACCTTTTGCAGCAGAAATAAAGTGCGTGAAATAACAAaaaaaaaa                    ]
[+] EMBL AU031700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                anCAAATCTATGGGATGGTTATTCTGCATATGANCACTGGGCCAAAATTGAGGTNCCTAAGGATAAGGATGAACTCGCTGAACTCCAGGCTAGGTTGAGGAANCGTTTCCCAGTAGATGCATATANCAAAGCACGCATGGAGCTTGACCCTAACAAGGTTCTTTCCAATGCAAAGTTAGAGAAGCTCTTCCCAGTAACAGAGGTCCAACATGAAAAGTAAGGTTGTGCTGATTGTTGACATGTTTGAAGACATGTCGGGGATACTTAAATCAATAGCCAAAACTACAATTCTGGTGGTTTCTCGTTACATAACCGGATATGAAGAGTTAAATTCTTTGTAGAACGTGGTCTGTTGCTGGAGAAGGGTTTTAGTGCTCCTCCTCTTGGATCAGTGCTTAGTACTGAACTGACGCGTTTGTTGCTGGAGGCTTTTATACTTGGGAACATCCATGCCTATTATGAGACTAAATGGTCTGTTTTATCAAaaa                                                                             ]
[+] EMBL AU032055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCNATGGGATGGTTATTCNGCATATGAACACTGGGCCAAAATTGAGGTTCCTAAGGATAAGGATGAACNCGCTGAACTCCAGGCTAGGTTGAGGAAACGTTTCCCAGTAGATGCATATNACAAAGCACGCATGGAGCTTGACCCTAACAAGGTTCTTTCCAATNCAAAGTTAGAGAAGCTCTTCCCAGTAACAGAGGTCCAACATGAAAAGTAAGGTTGTGCTGATTGTTGACATGTTTGAAGACATGTCGGGGATACTTAAATCAATAGCCAAAACTACAATTCTGGTGGTTTCTCGTTACATAACCGGATATGAAGAGTTAAATTCTTTGTAGAACGTGGTCTGTTGCTGGAGAAGGGTTTTAGTGCTCCTCCTCTTGGATCAGTGCTTAGTACTGAACTGACGCGTTTGTTGCTGGAGGCTTTTATACTTGGGAACATCCATGCCTATTATGAGACTAAATGGTCTGTTTTATCAAGAGAAATGGCATGTAACCTTTTGCAGCAGAAATAAAGTGCGTGAAATAACAAaaaaa                       ]
[+] EMBL AA750137             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCTCGTTACATAA CGGATAT AAGAGTTAAA TCTTTGTAGAACGTGGTCTGTTGCTGGAGAAGGGTTTTAGTGCTCCTCCTCTTGGATCAGT CTTAGTACTGAACTGACGCGTTTGTTGCTAGAGGCTTTTAT CT  GGAACAT CAT CGTATatag                                                                                                        ]


>consensus_11992#0 TGCATTTCGTCCCTGTTCTGCCGCCGACGAGCGACGATGCGGCGCCTCCTCCTCGCCGGC ATCCTCCGCCGCGCCTCCTCCTCCCCTTCCTCCCACCACCACCTCCACCTTGTCAGGGCG CTCTCCGCCTCGTCCCCGCTCCCGGCCTCCGACGCCGACCTCCGCAAGTACGCCGGCTAC GCGCTCCTCCTCCTCGGCTGCGGCGCCGCCACCTACTACTCCTTCCCGCTTCCCCCCGAC GCGCTCCACAAGAAGGCCGTCCCCTTCAAGTACGCGCCGCTCCCCGACGACCTCCACGCC GTCTCCAACTGGAGCGCCACCCACGAGGTCCACACCCGCGTCCTCCTCCAGCCCGACTCC CTCCCCGCCCTCCACGACGCGCTCGCCGCCGCCCACGGCGAGTGCCGCAAGCTCAGGCCC CTCGGCTCGGGCCTGTCCCCCAATGGCCTCGCGCTCTCCCGCGCCGGCATGGTCAACCTC GCGCTCATGGACAAGGTGCTCGGCGTCGACGCCAAGAAGAAGACCGTCACCGTGCAGGCC GGGATACGCGTCGCCGAGCTTGTCGACGCGCTCCGGGAGCATGGTCTCACGCTGCAGAAC TTCGCGTCCATTCGGGAGCAGCAGGTCGGCGGCATCATTCAGGTTGGTGCCCATGGCACT GGTGCAAGATTGCCACCAATTGATGAACAAGTTATTAGCATGAAATTGGTTACCCCTGCC AAGGGGACAATAGAGTTGTCAAGGGAGAAGGATCCTGATTTATTCTATCTTGCTCGCTGT GGACTTGGTGGCCTTGGAGTTGTAGCAGAAGTTACTCTTCAATGTGTGGAAAGACACCAA CTTATTGAACACACTTTCGTTTCCAATGCAGACGAAGTCAAGAAAAATCACAAGAAATGG CTCTCTGAAAATAAACATATTAAGTACTTATGGATTCCATACACCGATACAGTTGTTGTT GTCCAATGCAATCCTCCTTCAAGGTGGAGAACTCCAAAGTTTACCTCAAAATATGGAAAG GATGAGGCTATACAACATGTTCGTGATCTTTATCATGAGTCATTGAAGAAATATAGAACT AAAGCAGAAAGTAATGACCCAGAAGTAGATCAGCTTTCATTCACTGAATTGAGGGATCGG TTGCTTACCCTGGATCCTCTAGACAAAGATCATGTGATCAGAATTAACAAAGCAGAAGCT GAATATTGGAAGAAGTCAGAGGGTTATCGCATGGGCTGGAGTGACGAAATATTAGGCTTT GATTGTGGTGGGCAGCAGTGGGTTTCTGAAACTTGCTTCCCTGCAGGGACCCTAGCAAAG CCTAATATGAAGGATCTGGATTATATAGAGGAGCTGCTGCAGTTGATTGAGAAGGAAGAT ATACCCGCACCAGCACCTATTGAGCAGCGTTGGACTGCCTGCAGCAGGAGTCCCATGAGC CCAGCATCAAGCTCTCAAGAAGATGACATATTTTCATGGGTTGGGATAATAATGTACCTC CCAACGTCGGATGCTCGCCAAAGGGAGGAAATTACAGAGGAATTTTTTAATTACAGAAGT AAGACGCAAACAAATCTATGGGATGGTTATTCTGCATATGAACACTGGGCCAAAATTGAG GTTCCTAAGGATAAGGATGAACTCGCTGAACTCCAGGCTAGGTTGAGGAAACGTTTCCCA GTAGATGCATATAACAAAGCACGCATGGAGCTTGACCCTAACAAGGTTCTTTCCAATGCA AAGTTAGAGAAGCTCTTCCCAGTAACAGAGGTCCAACATGAAAAGTAAGGTTGTGCTGAT TGTTGACATGTTTGAAGACATGTCGGGGATACTTAAATCAATAGCCAAAACTACAATTCT GGTGGTTTCTCGTTACATAACCGGATATGAAGAGTTAAATTCTTTGTAGAACGTGGTCTG TTGCTGGAGAAGGGTTTTAGTGCTCCTCCTCTTGGATCAGTGCTTAGTACTGAACTGACG CGTTTGTTGCTGGAGGCTTTTATACTTGGGAACATCCATGCCTATTATGAGACTAAATGG TCTGTTTTATCAAGAGAAATGGCATGTAACCTTTTGCAGCAGAAATAAAGTGCGTGAAAT AACAATTTGATGCGCTTCAAGAAATTAAAGATT



consensusID : consensus_11992#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 421
fasta sequence
                              [CATATTAAGTACTTATGGATTCCATACACCGATACAGTTGTTGTTGTCCAATGCAATCCTCCTTCAAGGTGGAGAACTCCAAAGTTTACCTCAAAATATGGAAAGGATGAGGCTATACAACATGTTCGTGATCTTTATCATGAGTCATTGAAGAAATATAGATGCTTTTCAGAACTAAAGCAGAAAGTAATGACCCAGAAGTAGATCAGCTTTCATTCACTGAATTGAGGGATCGGTTGCTTACCCTGGATCCTCTAGACAAAGATCATGTGATCAGAATTAACAAAGCAGAAGCTGAATATTGGGAGGAGGTCAGAGGGTTATCGCATGGGCTGGAGTTACGGAATATTAGGCTTTGATTGTNGTGGGCAGCAGTGGGTTTCTGAAACTTTCTTCCCTTGAGGGACCCTAGCAAGCCTAN]

[+] EMBL OS1523A              [CATATTAAGTACTTATGGATTCCATACACCGATACAGTTGTTGTTGTCCAATGCAATCCTCCTTCAAGGTGGAGAACTCCAAAGTTTACCTCAAAATATGGAAAGGATGAGGCTATACAACATGTTCGTGATCTTTATCATGAGTCATTGAAGAAATATAGATGCTTTTCAGAACTAAAGCAGAAAGTAATGACCCAGAAGTAGATCAGCTTTCATTCACTGAATTGAGGGATCGGTTGCTTACCCTGGATCCTCTAGACAAAGATCATGTGATCAGAATTAACAAAGCAGAAGCTGAATATTGGGAGGAGGTCAGAGGGTTATCGCATGGGCTGGAGTTACGGAATATTAGGCTTTGATTGTNGTGGGCAGCAGTGGGTTTCTGAAACTTTCTTCCCTTGAGGGACCCTAGCAAGCCTAN]


>consensus_11992#1 CATATTAAGTACTTATGGATTCCATACACCGATACAGTTGTTGTTGTCCAATGCAATCCT CCTTCAAGGTGGAGAACTCCAAAGTTTACCTCAAAATATGGAAAGGATGAGGCTATACAA CATGTTCGTGATCTTTATCATGAGTCATTGAAGAAATATAGATGCTTTTCAGAACTAAAG CAGAAAGTAATGACCCAGAAGTAGATCAGCTTTCATTCACTGAATTGAGGGATCGGTTGC TTACCCTGGATCCTCTAGACAAAGATCATGTGATCAGAATTAACAAAGCAGAAGCTGAAT ATTGGGAGGAGGTCAGAGGGTTATCGCATGGGCTGGAGTTACGGAATATTAGGCTTTGAT TGTNGTGGGCAGCAGTGGGTTTCTGAAACTTTCTTCCCTTGAGGGACCCTAGCAAGCCTA N



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11992#0      TGCATTTCGTCCCTGTTCTGCCGCCGACGAGCGACGATGCGGCGCCTCCTCCTCGCCGGC 60
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      ATCCTCCGCCGCGCCTCCTCCTCCCCTTCCTCCCACCACCACCTCCACCTTGTCAGGGCG 120
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      CTCTCCGCCTCGTCCCCGCTCCCGGCCTCCGACGCCGACCTCCGCAAGTACGCCGGCTAC 180
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GCGCTCCTCCTCCTCGGCTGCGGCGCCGCCACCTACTACTCCTTCCCGCTTCCCCCCGAC 240
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GCGCTCCACAAGAAGGCCGTCCCCTTCAAGTACGCGCCGCTCCCCGACGACCTCCACGCC 300
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GTCTCCAACTGGAGCGCCACCCACGAGGTCCACACCCGCGTCCTCCTCCAGCCCGACTCC 360
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      CTCCCCGCCCTCCACGACGCGCTCGCCGCCGCCCACGGCGAGTGCCGCAAGCTCAGGCCC 420
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      CTCGGCTCGGGCCTGTCCCCCAATGGCCTCGCGCTCTCCCGCGCCGGCATGGTCAACCTC 480
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GCGCTCATGGACAAGGTGCTCGGCGTCGACGCCAAGAAGAAGACCGTCACCGTGCAGGCC 540
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GGGATACGCGTCGCCGAGCTTGTCGACGCGCTCCGGGAGCATGGTCTCACGCTGCAGAAC 600
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      TTCGCGTCCATTCGGGAGCAGCAGGTCGGCGGCATCATTCAGGTTGGTGCCCATGGCACT 660
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GGTGCAAGATTGCCACCAATTGATGAACAAGTTATTAGCATGAAATTGGTTACCCCTGCC 720
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      AAGGGGACAATAGAGTTGTCAAGGGAGAAGGATCCTGATTTATTCTATCTTGCTCGCTGT 780
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GGACTTGGTGGCCTTGGAGTTGTAGCAGAAGTTACTCTTCAATGTGTGGAAAGACACCAA 840
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      CTTATTGAACACACTTTCGTTTCCAATGCAGACGAAGTCAAGAAAAATCACAAGAAATGG 900
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      CTCTCTGAAAATAAACATATTAAGTACTTATGGATTCCATACACCGATACAGTTGTTGTT 960
consensus_11992#1      ---------------CATATTAAGTACTTATGGATTCCATACACCGATACAGTTGTTGTT 45
                                      *********************************************

consensus_11992#0      GTCCAATGCAATCCTCCTTCAAGGTGGAGAACTCCAAAGTTTACCTCAAAATATGGAAAG 1020
consensus_11992#1      GTCCAATGCAATCCTCCTTCAAGGTGGAGAACTCCAAAGTTTACCTCAAAATATGGAAAG 105
                       ************************************************************

consensus_11992#0      GATGAGGCTATACAACATGTTCGTGATCTTTATCATGAGTCATTGAAGAAATATAGA--- 1077
consensus_11992#1      GATGAGGCTATACAACATGTTCGTGATCTTTATCATGAGTCATTGAAGAAATATAGATGC 165
                       *********************************************************   

consensus_11992#0      --------ACTAAAGCAGAAAGTAATGACCCAGAAGTAGATCAGCTTTCATTCACTGAAT 1129
consensus_11992#1      TTTTCAGAACTAAAGCAGAAAGTAATGACCCAGAAGTAGATCAGCTTTCATTCACTGAAT 225
                               ****************************************************

consensus_11992#0      TGAGGGATCGGTTGCTTACCCTGGATCCTCTAGACAAAGATCATGTGATCAGAATTAACA 1189
consensus_11992#1      TGAGGGATCGGTTGCTTACCCTGGATCCTCTAGACAAAGATCATGTGATCAGAATTAACA 285
                       ************************************************************

consensus_11992#0      AAGCAGAAGCTGAATATTGGAAGAAG-TCAGAGGGTTATCGCATGGGCTGGAGTGACGAA 1248
consensus_11992#1      AAGCAGAAGCTGAATATTGGGAGGAGGTCAGAGGGTTATCGCATGGGCTGGAGTTACGGA 345
                       ******************** ** ** *************************** *** *

consensus_11992#0      ATATTAGGCTTTGATTGTGGTGGGCAGCAGTGGGTTTCTGAAACTTGCTTCCCTGCAGGG 1308
consensus_11992#1      ATATTAGGCTTTGATTGTNGTGGGCAGCAGTGGGTTTCTGAAACTTTCTTCCCTTGAGGG 405
                       ****************** *************************** *******  ****

consensus_11992#0      ACCCTAGCAAAGCCTAATATGAAGGATCTGGATTATATAGAGGAGCTGCTGCAGTTGATT 1368
consensus_11992#1      ACCCTAGCAA-GCCTAN------------------------------------------- 421
                       ********** *****                                            

consensus_11992#0      GAGAAGGAAGATATACCCGCACCAGCACCTATTGAGCAGCGTTGGACTGCCTGCAGCAGG 1428
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      AGTCCCATGAGCCCAGCATCAAGCTCTCAAGAAGATGACATATTTTCATGGGTTGGGATA 1488
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      ATAATGTACCTCCCAACGTCGGATGCTCGCCAAAGGGAGGAAATTACAGAGGAATTTTTT 1548
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      AATTACAGAAGTAAGACGCAAACAAATCTATGGGATGGTTATTCTGCATATGAACACTGG 1608
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GCCAAAATTGAGGTTCCTAAGGATAAGGATGAACTCGCTGAACTCCAGGCTAGGTTGAGG 1668
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      AAACGTTTCCCAGTAGATGCATATAACAAAGCACGCATGGAGCTTGACCCTAACAAGGTT 1728
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      CTTTCCAATGCAAAGTTAGAGAAGCTCTTCCCAGTAACAGAGGTCCAACATGAAAAGTAA 1788
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GGTTGTGCTGATTGTTGACATGTTTGAAGACATGTCGGGGATACTTAAATCAATAGCCAA 1848
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      AACTACAATTCTGGTGGTTTCTCGTTACATAACCGGATATGAAGAGTTAAATTCTTTGTA 1908
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GAACGTGGTCTGTTGCTGGAGAAGGGTTTTAGTGCTCCTCCTCTTGGATCAGTGCTTAGT 1968
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      ACTGAACTGACGCGTTTGTTGCTGGAGGCTTTTATACTTGGGAACATCCATGCCTATTAT 2028
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      GAGACTAAATGGTCTGTTTTATCAAGAGAAATGGCATGTAACCTTTTGCAGCAGAAATAA 2088
consensus_11992#1      ------------------------------------------------------------
                                                                                   

consensus_11992#0      AGTGCGTGAAATAACAATTTGATGCGCTTCAAGAAATTAAAGATT 2133
consensus_11992#1      ---------------------------------------------
                                                                    




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)