These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12028#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3972 fasta sequence [TCACACCCGGTGGCGAGCTGCTGCGATCACCGACGCGGCGCACCCACGCCACCACCACCACCCGCGGCCGAACGCACTAAGCCTCTCTCTCTCTCTCTCTCTCTCGCCGCCGCCACGACCCGACGCGACGCGACGGGGCCCAGCCCACGCCCAACTCCCCCTACATCTCCCCCCGCCGCGGCGGCGGGGGCGCGGTGAAGCTTCCTCCCCGCTCCGCTCCGCCGCGCTGCTCTGCTCTGCCTCTGCAGCCGCCGCCGCCGTTCCCGGCCCTTCGATCGGGGCGGGGGGCCAGATCCCCCCGCGCGTCGGCCGAGTGGGAGTGGGGCGCGCGGGACGGAGGTGCGGATCTGATTGGTCTACGCGCGAGATCTAGCCGGGTGCTGCTGTTCCTGCTGGTGGTTGCGGGGATCGGAGCGGAGGCGGGGGAGGAGGAGGGATGGCGTGGTGGTCGGGGAAGGTGTCGCTCGGTGGCCTGCAGGATATCGCAGGGGCCGTGAATAAGATCAGCGAGAGCGTGAAGAACATCGAGAAGAACTTCGACAGCGCGCTCGGGCTCGAGGAGAAGCGCGACGATGAGGAAGGATCAGGATCACATGCATCTAACTCTGATAGAATAGGGTTCTTTAATCCTGTCATGGCATTCATGGGAAATAATGGCGAGGAGGATTCTGCTGAAGCATCAGAAAAGCAGCAACCTCCAAAAAGTACAACCGCAGAACAGAGCCAAAGTGCCTCCACAGAGGCGCCTACATCCAAGGTAGATGCTTCTGAAGAATCGGAATCAACACAATCTCCAAAGCCTTCTGAACAAGGAGAGACTCTTATCAGCTCAACTGAGCCACCTGTATCCAAGGCTGAGGTTTCTGAGCAACTAGCAACACCAAAAACTCCAAAATCACTTTCAGCAACAGAAGAAAAGCCTAGTCATTCTACTGAATCACCCACATATAAAGGGGATTCAGAAGCACCACAATCTCCCACAGATCCATCAACAGCAGAAGAAAACAGTGGATCCACTGAGACGGGTAATACAATTGAGACGGGAAACCAGGATCATCAAGAGACAAAATATTCTGGTCCTAATGATGAAGCGCCACAAAGTCAGATTGGAGAATCTGACAGAGGCATACCTGATGGTACAAAGCCTTCTTCACCTACTGAATTAGATCAATCAGGTAACACGGGAACAACTGAATACCTTCATGCTGGAACGGAAAACATAGATGATAAAAATGCCATACAATCACAACCACTAGATTCCATTCTAGCCAGTTCAGATGATGTAAATG-AAGCTGTGAAAATTGTTAAAGGAGCTGATGATCGAAATGAAATAAGCAGTTCACATGAGAATACTGACACCGTTGACCAAGCTAGTCATGTGGAAGTCATAGAACATGATGAGCATACTAATGCTGCTGAAAATGATGAAGAAGCTAATCGAACAGAAGCACAGGTAGCAACTGTTGTTGAAAGGGAGGAGAATACAATGGTGCAGCTTGAAGACCTTAGCTCAATGTCCATAATTGTGAGCAATGATTCAAACTCGCAAAATGAGTCGGTGCCCACTTCTGCAGATGTGCCTGTTGGACTGGTAGAGGTTGGTTCCAATTCAAATGATTTGAGAAAAGAAGAAAATATCCAGGGCTCTGTTACAACTAGCAATCATCTGGAATCTGTCGGTGCTGTCGCTGAACTTGAGAAATTAAGACGTGAAATGAAGATGATGGAAGCTGCATTGCAAGGTGCTGCAAGACAATCCCAGTCCAAAGCTGATGAAATTGCAAGACTGATGAATGAGAATGAACAACTGAAATCAACAATTGATGATCTTAAGAGCAAGTCAGCTGAAGCCGAAATGGATGCACTTAAAGATGAATATCACCAGAGAGTAGCAACTCTTGAAAGGAAGGTGTATGCCTTGACCAAAGAACGGGATACATTAAGGAGAGAGCAAAATAAAAAAAGTGATGCAGCTGCTCTTTTGAAAGAAAAGGATGAAATTATCAGTCAGGTCATGGCGGAAGGTGAAGAGCTATCAAAAAAACAAGCTGCTCAAGAAGCTACTATGCGGAAACTTAGGGCACAGGTTCGTGAACTTGAAGAAGAAAAACAACGGCTGAACTCAAAGATCCAGGTTGA-GGAGACAAAGG-TTGAGAGTATTAAAAGAG-ATAAGGC-TGCAACGGAG-AAATTGCTACA-GGAAACAA-TAG-AAAGAAATCAAACTGAACTTGCAGCTCAGAAGGAGTTCTACACCAATGCTCTTAACGCAGCTAAAGAGGCTGAGGCATTAGCCGAAGCAAGAGTCAACACTGAAGCCAAAGTTGAACTTGAGAGTCGTTTAAGAGAAGCTTGTGAAAAAGAAAATATCTTAATTAAGACGATTGAGGAGTTGAGGCATGCTCTCACAAGGCAAGAACAGGAGGCTGCATTCAGGGAAGAAAGGCTGAAAAGGGATTATGATGATCTTCAAAGGCGGTATCAATCCAGTGAACTTCGTTACAATGAACTGGTCACACAAGTTCCTGAATCCACCAGACCACTTCTAAGGCAAATTGAAGCCATGCAGGAAACAGCTGCTCGAAGGGCAGAGGCTTGGGCTGGTGTAGAGAGAACCTTAAACTCTCGACTTCAGGAAGCAGAAGCAAAAGCTGCTGCTGCAGAAGAAAAGGAACGGTCTGTAAATGAACGTTTGTCTCAAAGCTCATCCCGGATAACTGTTCTAGAGACCCAGATTACAATTCTTAGAACAGAGCAGACACAGCTGAGTCGATCTCTTGAAAAAGAGAGGCAGAGAGCATCCGAAAGTAGACAGGAGTACCTGGCAATTAAGGAGGAGGCGGCAATGCAAGAAGGACGGGCGAAACAGCTTGAAGAAGAAATAAAGGAGCTTCGTACTAGGCACAAAAAGGAGCTGCAAGATGCAGCAGAACACAGGGAGCTGCTTGAGAAGGACCTTGAAAGAGAAAAGGCTGCCAGGGCAGAGCTTGAGAAAACATCTTCCCGTGATGCACCAAAAATTCCGCTTCCAGATCAGACAAGAAATGCTCCTCTCAGAAAGCTCTCTAGTTCTGGCAGTATCAATAGTCTGGAAGAAAGCCATTTCCTTCAAGCATCATTAGATTTGTCAGACAACGCTTCATTAGAGAGGAGAATGTCTGCTGAAAGTAATATGTCGTATTATCTTCGGAGCATGACTCCAAGTGCTTTTGAATCAGCACTCCGTCAGAAAGATGGAGAGCTAGCTTCTTACACATCGCGTTTGGCCTCATTAGAATCTATTCGGAATTCTCTGGCAGAGGAGTTGGTGAAAATGACTGAACAGTGTGAGAAGTTGCGTACCGAGGCTTCTGCTCTGCCTGGTTTAAGGGCTGAGCTGGAAGCTTTGAAACAAAGACACTTTCAAGCTCTAGAACTAATGGGGGAACGTGATGAAGAGTTGGAAGAGCTAAGAAATGACATTGTTGACCTAAAAGAGATGTACAGAGAACAAGTGGATCTTCTTGTTAGCCAGCTCCAATCTTTGGGTGCTCGTGTATAGTGCTGCTGTATGTCAGTATGTAGCTTCGGCTGCCATCCATTTTTTTTTCGCATCGCGCTAATCTACTAAGCCCCATACAGCAGATCTGAAGCTTGGCGTGTTTCTTCGAAATTCAAGCCGTGACAAATACCGAAAGTTCATAGCCATACCAGTGTGAAAATATTCGTTTTTGTACATCTTGAAGCACAAGTCTTTTTGGACAGTTGAGCACCCTTGTTTAATTTAGTAGGTTACTCTGTTGTATACTAGTTTGGATAGCTTTACGGTTTTTAAGCCTATTGTTTGCAATTCTTTCCAGTGAAGTGTATCAAATTTGTAATTCGATTAAAAGTGTATCACAGCGGAATGCAACCCCAATAATATGAGAGCTCGTTTTTGTCATTTTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK067197 [TCACACCCGGTGGCGAGCTGCTGCGATCACCGACGCGGCGCACCCACGCCACCACCACCACCCGCGGCCGAACGCACTAAGCCTCTCTCTCTCTCTCTCTCTCTCGCCGCCGCCACGACCCGACGCGACGCGACGGGGCCCAGCCCACGCCCAACTCCCCCTACATCTCCCCCCGCCGCGGCGGCGGGGGCGCGGTGAAGCTTCCTCCCCGCTCCGCTCCGCCGCGCTGCTCTGCTCTGCCTCTGCAGCCGCCGCCGCCGTTCCCGGCCCTTCGATCGGGGCGGGGGGCCAGATCCCCCCGCGCGTCGGCCGAGTGGGAGTGGGGCGCGCGGGACGGAGGTGCGGATCTGATTGGTCTACGCGCGAGATCTAGCCGGGTGCTGCTGTTCCTGCTGGTGGTTGCGGGGATCGGAGCGGAGGCGGGGGAGGAGGAGGGATGGCGTGGTGGTCGGGGAAGGTGTCGCTCGGTGGCCTGCAGGATATCGCAGGGGCCGTGAATAAGATCAGCGAGAGCGTGAAGAACATCGAGAAGAACTTCGACAGCGCGCTCGGGCTCGAGGAGAAGCGCGACGATGAGGAAGGATCAGGATCACATGCATCTAACTCTGATAGAATAGGGTTCTTTAATCCTGTCATGGCATTCATGGGAAATAATGGCGAGGAGGATTCTGCTGAAGCATCAGAAAAGCAGCAACCTCCAAAAAGTACAACCGCAGAACAGAGCCAAAGTGCCTCCACAGAGGCGCCTACATCCAAGGTAGATGCTTCTGAAGAATCGGAATCAACACAATCTCCAAAGCCTTCTGAACAAGGAGAGACTCTTATCAGCTCAACTGAGCCACCTGTATCCAAGGCTGAGGTTTCTGAGCAACTAGCAACACCAAAAACTCCAAAATCACTTTCAGCAACAGAAGAAAAGCCTAGTCATTCTACTGAATCACCCACATATAAAGGGGATTCAGAAGCACCACAATCTCCCACAGATCCATCAACAGCAGAAGAAAACAGTGGATCCACTGAGACGGGTAATACAATTGAGACGGGAAACCAGGATCATCAAGAGACAAAATATTCTGGTCCTAATGATGAAGCGCCACAAAGTCAGATTGGAGAATCTGACAGAGGCATACCTGATGGTACAAAGCCTTCTTCACCTACTGAATTAGATCAATCAGGTAACACGGGAACAACTGAATACCTTCATGCTGGAACGGAAAACATAGATGATAAAAATGCCATACAATCACAACCACTAGATTCCATTCTAGCCAGTTCAGATGATGTAAATG AAGCTGTGAAAATTGTTAAAGGAGCTGATGATCGAAATGAAATAAGCAGTTCACATGAGAATACTGACACCGTTGACCAAGCTAGTCATGTGGAAGTCATAGAACATGATGAGCATACTAATGCTGCTGAAAATGATGAAGAAGCTAATCGAACAGAAGCACAGGTAGCAACTGTTGTTGAAAGGGAGGAGAATACAATGGTGCAGCTTGAAGACCTTAGCTCAATGTCCATAATTGTGAGCAATGATTCAAACTCGCAAAATGAGTCGGTGCCCACTTCTGCAGATGTGCCTGTTGGACTGGTAGAGGTTGGTTCCAATTCAAATGATTTGAGAAAAGAAGAAAATATCCAGGGCTCTGTTACAACTAGCAATCATCTGGAATCTGTCGGTGCTGTCGCTGAACTTGAGAAATTAAGACGTGAAATGAAGATGATGGAAGCTGCATTGCAAGGTGCTGCAAGACAATCCCAGTCCAAAGCTGATGAAATTGCAAGACTGATGAATGAGAATGAACAACTGAAATCAACAATTGATGATCTTAAGAGCAAGTCAGCTGAAGCCGAAATGGATGCACTTAAAGATGAATATCACCAGAGAGTAGCAACTCTTGAAAGGAAGGTGTATGCCTTGACCAAAGAACGGGATACATTAAGGAGAGAGCAAAATAAAAAAAGTGATGCAGCTGCTCTTTTGAAAGAAAAGGATGAAATTATCAGTCAGGTCATGGCGGAAGGTGAAGAGCTATCAAAAAAACAAGCTGCTCAAGAAGCTACTATGCGGAAACTTAGGGCACAGGTTCGTGAACTTGAAGAAGAAAAACAACGGCTGAACTCAAAGATCCAGGTTGA GGAGACAAAGG TTGAGAGTATTAAAAGAG ATAAGGC TGCAACGGAG AAATTGCTACA GGAAACAA TAG AAAGAAATCAAACTGAACTTGCAGCTCAGAAGGAGTTCTACACCAATGCTCTTAACGCAGCTAAAGAGGCTGAGGCATTAGCCGAAGCAAGAGTCAACACTGAAGCCAAAGTTGAACTTGAGAGTCGTTTAAGAGAAGCTTGTGAAAAAGAAAATATCTTAATTAAGACGATTGAGGAGTTGAGGCATGCTCTCACAAGGCAAGAACAGGAGGCTGCATTCAGGGAAGAAAGGCTGAAAAGGGATTATGATGATCTTCAAAGGCGGTATCAATCCAGTGAACTTCGTTACAATGAACTGGTCACACAAGTTCCTGAATCCACCAGACCACTTCTAAGGCAAATTGAAGCCATGCAGGAAACAGCTGCTCGAAGGGCAGAGGCTTGGGCTGGTGTAGAGAGAACCTTAAACTCTCGACTTCAGGAAGCAGAAGCAAAAGCTGCTGCTGCAGAAGAAAAGGAACGGTCTGTAAATGAACGTTTGTCTCAAAGCTCATCCCGGATAACTGTTCTAGAGACCCAGATTACAATTCTTAGAACAGAGCAGACACAGCTGAGTCGATCTCTTGAAAAAGAGAGGCAGAGAGCATCCGAAAGTAGACAGGAGTACCTGGCAATTAAGGAGGAGGCGGCAATGCAAGAAGGACGGGCGAAACAGCTTGAAGAAGAAATAAAGGAGCTTCGTACTAGGCACAAAAAGGAGCTGCAAGATGCAGCAGAACACAGGGAGCTGCTTGAGAAGGACCTTGAAAGAGAAAAGGCTGCCAGGGCAGAGCTTGAGAAAACATCTTCCCGTGATGCACCAAAAATTCCGCTTCCAGATCAGACAAGAAATGCTCCTCTCAGAAAGCTCTCTAGTTCTGGCAGTATCAATAGTCTGGAAGAAAGCCATTTCCTTCAAGCATCATTAGATTTGTCAGACAACGCTTCATTAGAGAGGAGAATGTCTGCTGAAAGTAATATGTCGTATTATCTTCGGAGCATGACTCCAAGTGCTTTTGAATCAGCACTCCGTCAGAAAGATGGAGAGCTAGCTTCTTACACATCGCGTTTGGCCTCATTAGAATCTATTCGGAATTCTCTGGCAGAGGAGTTGGTGAAAATGACTGAACAGTGTGAGAAGTTGCGTACCGAGGCTTCTGCTCTGCCTGGTTTAAGGGCTGAGCTGGAAGCTTTGAAACAAAGACACTTTCAAGCTCTAGAACTAATGGGGGAACGTGATGAAGAGTTGGAAGAGCTAAGAAATGACATTGTTGACCTAAAAGAGATGTACAGAGAACAAGTGGATCTTCTTGTTAGCCAGCTCCAATCTTTGGGTGCTCGTGTATAGTGCTGCTGTATGTCAGTATGTAGCTTCGGCTGCCATCCATTTTTTTTTCGCATCGCGCTAATCTACTAAGCCCCATACAGCAGATCTGAAGCTTGGCGTGTTTCTTCGAAATTCAAGCCGTGACAAATACCGAAAGTTCATAGCCATACCAGTGTGAAAATATTCTTTTTTGTACATCTTGAAGCACAAGTCTTTTTGGACAGTTGAGCACCCTTGTTTAATTTAGTAGGTTACTCTGTTGTATACTAGTTTGGATAGCTTTACGGTTTTTAAGCCTATTGTTTGCAATTCTTTCCAGTGAAGTGTATCAAATTTGTAATTCGATTAAAAGTGTATCACAGCGGAATGCGACCCCAATAATATGAGAGCTCGTTTTTGTCATTTTCCTC ] [+] EMBL CF306520 [ TAAGATCAGCGAGAGCGTGAAGAACATCGAGAAGAACTTCGACAGCGCGCTCGGGCTCGAGGAGAAGCGCGACGATGAGGAAGGATCAGGATCACATGCATCTAACTCTGATAGAATAGGGTTCTTTAATCCTGTCATGGCATTCATGGGAAATAATGGCGAGGAGGATTCTGCTGAAGCATCAGAAAAGCAGCAACCTCCAAAAAGTACAACCGCAGAACAGAGCCAAAGTGCCTCCACAGAGGCGCCTACATCCAAGGTAGATGCTTCTGAAGAATCGGAATCAACACAATCTCCAAAGCCTTCTGAACAAGGAGAGACTCTTATCAGCTCAACTGAGCCACCTGTATCCAAGGCTGAGGTTTCTGAGCAACTAGCAACACCAAAAACTCCAAAATCACTTTCAGCAACAGAAGAAAAGCCTAGTCATTCTACTGAATCACCCACATATAAAGGGGATTCAGAAGCACCACAATCTCCCACAGATCCATCAACAGCAGAAGAAAACAGTGGATCCACTGAGACGGGTAATACAATTGAGACGGGAAACCAGGATCATCAAGAGACAAAATATTCTGGTCCTAATGAT ] [+] EMBL CF307113 [ AAATAATGGCGAGGAGGATTCTGCTGAAGCATCACAAAAGCATCAACCTCCAAAAAGCTCAACCGCAGAACAGAGCCAAAGTGCCTCCACAGAGGCGCCTACATCCAAGGTAGATGCTTCTGAAGAATCGGAATCAACACAATCTCCAAAGCCTTCTGAACAAGGAGAGACTCTTATCAGCTCAACTGAGCCACCTGTATCCAAGGCTGAGGTTTCTGAGCAACTAGCAACACCAAAAACTCCAAAATCACTTTCAGCAACAGAAGAAAAGCCTAGTCATTCTACTGAATCACCCACATATAAAGGGGATTGAGAAGCACCACAATCTCCCACAGATCCATCAACAGCAGAAGAAAACAGTGGATCCACTGAGACGGGTAATACAATTGAGACGGGAAACCAGGATCATCAAGAGACAAAATATTCTGGTCCTAATGATGAAGCGCCACAAAGTCAGATTGGAGAATCTGACAGAGGCATACCTGATGGTACAAAGCCTTCTTCACCTACTGAATTAGATCAATCAGGTAACACGGGAACAACTGAATACCTTCATGCTGGAACGGAAAACATAGATGATAAAAATGCCATACAATCACAACCACTAGATTCCATTCTAGCCAGTTCAGATGATGTAAATGAAAGCTGTGAAAATTGTTAAAGGAGCTGATGATCGAAATGAAATAAGCAGTTCACATG ] [+] EMBL OSR17141A [ GTAGCAACTCTTGAAAGGAAGGTGTATGCCTTGACCAAAGAACGGGATACATTAAGGAGAGAGCAAAATAAAAAAAGTGATGCAGCTGCTCTTTTGAAAGAAAAGGATGAAATTATCAGTCAGGTCATGGCGGAAGGTGAAGAGCTATCAAAAAAACAAGCTGCTCAAGAAGCTACTATGCGGAAACTTAGGGCACAGGTTCGTGAACTTGAAGAAGAAAAACAACGGCTGAACTCAAAGATCCAGGTTGAGGGNGACAAAGGTTTGAGAGTATTAAAAGNGNTTAAGGCNTGCAACGGNGNAATTTGCTNCAGGGAANCAATTAGNAAAGNAATnca ] [-] EMBL CA762123 [ cAGAGTCACCCCTGAAGCCAAAGTTGAACTTGAGAGTCGTTTAAGAGAAGCTTGTGAAAAAGAAAATATCTTAATTAAGCCGATTGAGGAGTTGAGGCATGCTCTCACAAGGCAAGAACAGGAGGCTGCATTCAGGGAAGAAAGGCTGAAAAGGGATTATGATGATCTTCAAAGGCGGTATCAATCCAGTGAACTTCGTTACAATGAACTGGTCACACAAGTTCCTGAATCCACCAGACCACTTCTAAGGCAAATTGAAGCCATGCAGGAAACAGCTGCTCGAAGGGCAGAGGCTTGGGCTGGTGTAGAGAGAACCTTAAACTCTCGACTTCAGGAAGCAGAAGCAAAAGCTGCTGCTGCAGAAGAAAAGGAACGGTCTGTAAATGAACGTTTGTCTCAAAGCTCATCCCGGATAACTGTTCTAGAGACCCAGATTACAATTCTTAGAACAGAGCAGACACAGCTGAGTCGATCTCTTGAAAAAGAGAGGCAGAGAGCATCCGAAAGTAGACAGGAGTACCTGGCAATTAAGGAGGAGGCGGCAATGCAAGAAGGACGGGCGAAACAGCTTGAAGAAGAAATAAAGGAGCTTCGTACTAGGCACAAAAAGGAGCTGCAAGATGCAGCAGAAC ] [+] EMBL AK062036 [ CGATCTCTTGAAAAAGAGAGGCAGAGAGCATCCGAAAGTAGACAGGAGTACCTGGCAATTAAGGAGGAGGCGGCAATGCAAGAAGGACGGGCGAAACAGCTTGAAGAAGAAATAAAGGAGCTTCGTACTAGGCACAAAAAGGAGCTGCAAGATGCAGCAGAACACAGGGAGCTGCTTGAGAAGGACCTTGAAAGAGAAAAGGCTGCCAGGGCAGAGCTTGAGAAAACATCTTCCCGTGATGCACCAAAAATTCCGCTTCCAGATCAGACAAGAAATGCTCCTCTCAGAAAGCTCTCTAGTTCTGGCAGTATCAATAGTCTGGAAGAAAGCCATTTCCTTCAAGCATCATTAGATTTGTCAGACAACGCTTCATTAGAGAGGAGAATGTCTGCTGAAAGTAATACGTCGTATTATCTTCGGAGCATGACTCCAAGTGCTTTTGAATCAGCACTCCGTCAGAAAGATGGAGAGCTAGCTTCTTACACATCGCGTTTGGCCTCATTAGAATCTATTCGGAATTCTCTGGCAGAGGAGTTGGTGAAAATGACTGAACAGTGTGAGAAGTTGCGTACCGAGGCTTCTGCTCTGCCTGGTTTAAGGGCTGAGCTGGAAGCTTTGAAACAAAGACACTTTCAAGCTCTAGAACTAATGGGGGAACGTGATGAAGAGTTGGAAGAGCTAAGAAATGACATTGTTGACCTAAAAGAGATGTACAGAGAACAAGTGGATCTTCTTGTTAGCCAGCTCCAATCTTTGGGTGCTCGTGTATAGTGCTGCTGTATGTCAGTATGTAGCTTCGGCTGCCATCCATTTTTTTTTCGCATCGCGCTAATCTACTAAGCCCCATACAGCAGATCTGAAGCTTGGCGTGTTTCTTCGAAGTTCAAGCCGTGACAAATACCGAAAGTTCATAGCCATACCAGTGTGAAAATATTCGTTTTTGTACATCTTGAAGCACAAGTCTTTTTGGACAGTTGAGCACCCTTGTTTAATTTAGTAGGTTACTCTGTTGTATACTAGTTTGGATAGCTTTACGGTTTTTAAGCCTATTGTTTGCAATCCTTTCCAGTGAAGTGTATCAAATTTGTAATTCGATTAAAAGTGTATCACAGCGGAATGCAACCCCAATAATATGAGAGCTCGTTTTTGT ] [+] EMBL AU225760 [ gccgctCATGACTCCAAGTGCTTTTGAATCAGCACTCCGTCAGAAAGATGGAGAGCTAGCTTCTTACACATCGCGTTTGGCCTCATTAGAATCTATTCGGAATTCTCTGGCAGAGGAGTTGGTGAAAATGACTGAACAGTGTGAGAAGTTGCGTACCGAGGCTTCTGCTCTGCCTGGTTTAAGGGCTGAGCTGGAAGCTTTGAAACAAAGACACTTTCAAGCTCTAGAACTAATGGGGGAACGTGATGAAGAGTTGGAAGAGCTAAGAAATGACATTGTTGACCTAAAAGAGATGTACAGAGAACAAGTGGATCTTCTTGTTAGCCAGCTCCAATCTTTGGGTGCTCGTGTATAGTGCTGCTGTATGTCAGTATGTAGCTTCGGCTG ] [+] EMBL BI811238 [ AGCCATACCAGTGTGAAAATATTCGTTTTTGTACATCTTGAAGCACATGTCTTTTTGGACAGTTGAGCACCCTTGTTTAATTTAGTAGGTTACTCTGTTGTATACTAGTTTGGATAGCTTTACGGTTTTTAAGCCTATTGTTTGCAATTCTTTCCAGTGAAGTGTATCAAATTTGTAATTCGATTAAAAGTGTATCACAGCGGAATGCAACCCCAATAATATGAGAGCTCGTTTTTGTCAaaaa ] [+] EMBL AU031785 [ CCCTTGTTTAATTTAGTAGGTTACTCTGTTGTATACTAGTTTGGATAGCTTTACGGTTTTTAAGCCTATTGTTTGCAATTNTTTCCAGTGAAGTNTATCAAATTTGTAATTCGATTAAAAGTGTNTCACAGCGGAATGCAACCCCAATAATATGAGAGCTCGTTTTTGTCATTTTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_12028#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 370 fasta sequence [TTTTTTTTTTAGCATCGCGCTAATCTACTAAGCCCCATACAGCAGATCTGAAGCTTGGCGTGTTTCTTCGAAATTCAAGCCGTGACAAATACCGAAAGTTCATAGCCATACCAGTGTGAAAATATTCGTTTTTGTACATCTTGAAGCACATGTCTTTTGGGACAGTTGAGACACCCTTGTTTAATTTAGTAGGTTACTCTGTTGTATACTAGTTTGGATAGCTTTACGGTTTTTAAGCCTATTGTTGTGCAATTCTTTCCAGTGAAGTGTATCAAATTTGTAATTCGATTAAAAGTGTATCACAGCGGAATGCAACCCCAATAAAAACAACAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAACGGA] [-] EMBL BM419462 [TTTTTTTTTTAGCATCGCGCTAATCTACTAAGCCCCATACAGCAGATCTGAAGCTTGGCGTGTTTCTTCGAAATTCAAGCCGTGACAAATACCGAAAGTTCATAGCCATACCAGTGTGAAAATATTCGTTTTTGTACATCTTGAAGCACATGTCTTTTGGGACAGTTGAGACACCCTTGTTTAATTTAGTAGGTTACTCTGTTGTATACTAGTTTGGATAGCTTTACGGTTTTTAAGCCTATTGTTGTGCAATTCTTTCCAGTGAAGTGTATCAAATTTGTAATTCGATTAAAAGTGTATCACAGCGGAATGCAACCCCAATAAAAACAACAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAACGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12028#0 TCACACCCGGTGGCGAGCTGCTGCGATCACCGACGCGGCGCACCCACGCCACCACCACCA 60 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 CCCGCGGCCGAACGCACTAAGCCTCTCTCTCTCTCTCTCTCTCTCGCCGCCGCCACGACC 120 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 CGACGCGACGCGACGGGGCCCAGCCCACGCCCAACTCCCCCTACATCTCCCCCCGCCGCG 180 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GCGGCGGGGGCGCGGTGAAGCTTCCTCCCCGCTCCGCTCCGCCGCGCTGCTCTGCTCTGC 240 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 CTCTGCAGCCGCCGCCGCCGTTCCCGGCCCTTCGATCGGGGCGGGGGGCCAGATCCCCCC 300 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GCGCGTCGGCCGAGTGGGAGTGGGGCGCGCGGGACGGAGGTGCGGATCTGATTGGTCTAC 360 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GCGCGAGATCTAGCCGGGTGCTGCTGTTCCTGCTGGTGGTTGCGGGGATCGGAGCGGAGG 420 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 CGGGGGAGGAGGAGGGATGGCGTGGTGGTCGGGGAAGGTGTCGCTCGGTGGCCTGCAGGA 480 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TATCGCAGGGGCCGTGAATAAGATCAGCGAGAGCGTGAAGAACATCGAGAAGAACTTCGA 540 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 CAGCGCGCTCGGGCTCGAGGAGAAGCGCGACGATGAGGAAGGATCAGGATCACATGCATC 600 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TAACTCTGATAGAATAGGGTTCTTTAATCCTGTCATGGCATTCATGGGAAATAATGGCGA 660 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GGAGGATTCTGCTGAAGCATCAGAAAAGCAGCAACCTCCAAAAAGTACAACCGCAGAACA 720 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GAGCCAAAGTGCCTCCACAGAGGCGCCTACATCCAAGGTAGATGCTTCTGAAGAATCGGA 780 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 ATCAACACAATCTCCAAAGCCTTCTGAACAAGGAGAGACTCTTATCAGCTCAACTGAGCC 840 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 ACCTGTATCCAAGGCTGAGGTTTCTGAGCAACTAGCAACACCAAAAACTCCAAAATCACT 900 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TTCAGCAACAGAAGAAAAGCCTAGTCATTCTACTGAATCACCCACATATAAAGGGGATTC 960 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AGAAGCACCACAATCTCCCACAGATCCATCAACAGCAGAAGAAAACAGTGGATCCACTGA 1020 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GACGGGTAATACAATTGAGACGGGAAACCAGGATCATCAAGAGACAAAATATTCTGGTCC 1080 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TAATGATGAAGCGCCACAAAGTCAGATTGGAGAATCTGACAGAGGCATACCTGATGGTAC 1140 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AAAGCCTTCTTCACCTACTGAATTAGATCAATCAGGTAACACGGGAACAACTGAATACCT 1200 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TCATGCTGGAACGGAAAACATAGATGATAAAAATGCCATACAATCACAACCACTAGATTC 1260 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 CATTCTAGCCAGTTCAGATGATGTAAATGAAGCTGTGAAAATTGTTAAAGGAGCTGATGA 1320 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TCGAAATGAAATAAGCAGTTCACATGAGAATACTGACACCGTTGACCAAGCTAGTCATGT 1380 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GGAAGTCATAGAACATGATGAGCATACTAATGCTGCTGAAAATGATGAAGAAGCTAATCG 1440 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AACAGAAGCACAGGTAGCAACTGTTGTTGAAAGGGAGGAGAATACAATGGTGCAGCTTGA 1500 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AGACCTTAGCTCAATGTCCATAATTGTGAGCAATGATTCAAACTCGCAAAATGAGTCGGT 1560 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GCCCACTTCTGCAGATGTGCCTGTTGGACTGGTAGAGGTTGGTTCCAATTCAAATGATTT 1620 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GAGAAAAGAAGAAAATATCCAGGGCTCTGTTACAACTAGCAATCATCTGGAATCTGTCGG 1680 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TGCTGTCGCTGAACTTGAGAAATTAAGACGTGAAATGAAGATGATGGAAGCTGCATTGCA 1740 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AGGTGCTGCAAGACAATCCCAGTCCAAAGCTGATGAAATTGCAAGACTGATGAATGAGAA 1800 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TGAACAACTGAAATCAACAATTGATGATCTTAAGAGCAAGTCAGCTGAAGCCGAAATGGA 1860 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TGCACTTAAAGATGAATATCACCAGAGAGTAGCAACTCTTGAAAGGAAGGTGTATGCCTT 1920 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GACCAAAGAACGGGATACATTAAGGAGAGAGCAAAATAAAAAAAGTGATGCAGCTGCTCT 1980 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TTTGAAAGAAAAGGATGAAATTATCAGTCAGGTCATGGCGGAAGGTGAAGAGCTATCAAA 2040 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AAAACAAGCTGCTCAAGAAGCTACTATGCGGAAACTTAGGGCACAGGTTCGTGAACTTGA 2100 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AGAAGAAAAACAACGGCTGAACTCAAAGATCCAGGTTGAGGAGACAAAGGTTGAGAGTAT 2160 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TAAAAGAGATAAGGCTGCAACGGAGAAATTGCTACAGGAAACAATAGAAAGAAATCAAAC 2220 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TGAACTTGCAGCTCAGAAGGAGTTCTACACCAATGCTCTTAACGCAGCTAAAGAGGCTGA 2280 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GGCATTAGCCGAAGCAAGAGTCAACACTGAAGCCAAAGTTGAACTTGAGAGTCGTTTAAG 2340 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AGAAGCTTGTGAAAAAGAAAATATCTTAATTAAGACGATTGAGGAGTTGAGGCATGCTCT 2400 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 CACAAGGCAAGAACAGGAGGCTGCATTCAGGGAAGAAAGGCTGAAAAGGGATTATGATGA 2460 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TCTTCAAAGGCGGTATCAATCCAGTGAACTTCGTTACAATGAACTGGTCACACAAGTTCC 2520 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TGAATCCACCAGACCACTTCTAAGGCAAATTGAAGCCATGCAGGAAACAGCTGCTCGAAG 2580 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GGCAGAGGCTTGGGCTGGTGTAGAGAGAACCTTAAACTCTCGACTTCAGGAAGCAGAAGC 2640 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AAAAGCTGCTGCTGCAGAAGAAAAGGAACGGTCTGTAAATGAACGTTTGTCTCAAAGCTC 2700 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 ATCCCGGATAACTGTTCTAGAGACCCAGATTACAATTCTTAGAACAGAGCAGACACAGCT 2760 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GAGTCGATCTCTTGAAAAAGAGAGGCAGAGAGCATCCGAAAGTAGACAGGAGTACCTGGC 2820 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AATTAAGGAGGAGGCGGCAATGCAAGAAGGACGGGCGAAACAGCTTGAAGAAGAAATAAA 2880 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GGAGCTTCGTACTAGGCACAAAAAGGAGCTGCAAGATGCAGCAGAACACAGGGAGCTGCT 2940 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TGAGAAGGACCTTGAAAGAGAAAAGGCTGCCAGGGCAGAGCTTGAGAAAACATCTTCCCG 3000 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TGATGCACCAAAAATTCCGCTTCCAGATCAGACAAGAAATGCTCCTCTCAGAAAGCTCTC 3060 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TAGTTCTGGCAGTATCAATAGTCTGGAAGAAAGCCATTTCCTTCAAGCATCATTAGATTT 3120 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GTCAGACAACGCTTCATTAGAGAGGAGAATGTCTGCTGAAAGTAATATGTCGTATTATCT 3180 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TCGGAGCATGACTCCAAGTGCTTTTGAATCAGCACTCCGTCAGAAAGATGGAGAGCTAGC 3240 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 TTCTTACACATCGCGTTTGGCCTCATTAGAATCTATTCGGAATTCTCTGGCAGAGGAGTT 3300 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 GGTGAAAATGACTGAACAGTGTGAGAAGTTGCGTACCGAGGCTTCTGCTCTGCCTGGTTT 3360 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AAGGGCTGAGCTGGAAGCTTTGAAACAAAGACACTTTCAAGCTCTAGAACTAATGGGGGA 3420 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 ACGTGATGAAGAGTTGGAAGAGCTAAGAAATGACATTGTTGACCTAAAAGAGATGTACAG 3480 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 AGAACAAGTGGATCTTCTTGTTAGCCAGCTCCAATCTTTGGGTGCTCGTGTATAGTGCTG 3540 consensus_12028#1 ------------------------------------------------------------ consensus_12028#0 CTGTATGTCAGTATGTAGCTTCGGCTGCCATCCATTTTTTTTTCGCATCGCGCTAATCTA 3600 consensus_12028#1 ---------------------------------TTTTTTTTTTAGCATCGCGCTAATCTA 27 ********* **************** consensus_12028#0 CTAAGCCCCATACAGCAGATCTGAAGCTTGGCGTGTTTCTTCGAAATTCAAGCCGTGACA 3660 consensus_12028#1 CTAAGCCCCATACAGCAGATCTGAAGCTTGGCGTGTTTCTTCGAAATTCAAGCCGTGACA 87 ************************************************************ consensus_12028#0 AATACCGAAAGTTCATAGCCATACCAGTGTGAAAATATTCGTTTTTGTACATCTTGAAGC 3720 consensus_12028#1 AATACCGAAAGTTCATAGCCATACCAGTGTGAAAATATTCGTTTTTGTACATCTTGAAGC 147 ************************************************************ consensus_12028#0 ACAAGTCTTTTTGGACAGTTGAG-CACCCTTGTTTAATTTAGTAGGTTACTCTGTTGTAT 3779 consensus_12028#1 ACATGTCTTTTGGGACAGTTGAGACACCCTTGTTTAATTTAGTAGGTTACTCTGTTGTAT 207 *** ******* *********** ************************************ consensus_12028#0 ACTAGTTTGGATAGCTTTACGGTTTTTAAGCCTATTGTT-TGCAATTCTTTCCAGTGAAG 3838 consensus_12028#1 ACTAGTTTGGATAGCTTTACGGTTTTTAAGCCTATTGTTGTGCAATTCTTTCCAGTGAAG 267 *************************************** ******************** consensus_12028#0 TGTATCAAATTTGTAATTCGATTAAAAGTGTATCACAGCGGAATGCAACCCCAATAATAT 3898 consensus_12028#1 TGTATCAAATTTGTAATTCGATTAAAAGTGTATCACAGCGGAATGCAACCCCAATAAAAA 327 ********************************************************* * consensus_12028#0 GAGAGCTCGTTTTTGTCATTTTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3958 consensus_12028#1 CAA----------------------CAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAA 365 * ******************* *************** consensus_12028#0 AAAAAAAAAAAAAA 3972 consensus_12028#1 ACGGA--------- 370 * * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||