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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1206 cluster # 1206       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1206#0 length = 612 sequences # 2  

consensusID : consensus_1206#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 612
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTAGCCGGAGCTTCCATATTTTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTTTTACATCAAGTCAAAGAGAGATCGGGGGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAGACGATGAACAAACTGGGAACACACGAAACAAGGTGGGAGACATCATCGAATCAGAGATGAACAATTAAACAAGGCTATATATGACGATGACGGCTTAGTTGCCACCCAGACTCCTCCCCAGCCCCGGGGGCTTGTTNAGGCGAATGAAAGCTGATGAACTTGCACCCTGCCTGACGTTTGTTCGAAACCCAATAATACGGACGAATGCTCCAGGGTTCGCCTCCTTTGGCTCCCCCGACTCCCTTGACACCTGGGTTGNTTCTGTGCNCCCCAACATTGGCACTTCCCNATGGTCCCATACCTGCCNCCTTTTTCCGGGGATTTTTTTGGTCCCCCCGGTNAAAAATCCACCTTGTTAACNCCAGGGGGGCCCCCCTTGGAANGACNGGTTNCCATTTGTTCCGAGTCCCCCGGNACGGGNGTGAAGTCCAATTTTATCCCCNTCNGC]

[+] EMBL CF301993             [TTTTTTTTTTTTTTTTTTTTTTTTAGCCGGAGCTTCCATATTTTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTTTTACATCAAGTCAAAGAGAGATCGGGGGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BE229037             [                   tataTAGCCGGAGCTTCCATATATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGAGAGAGATCAGGTGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAGACGATGAACAAACTGGGAACACACGAAACAAGGTGGGAGACATCATCGAATCAGAGATGAACAATTAAACAAGGCTATATATGACGATGACGGCTTAGTTGCCACCCAGACTCCTCCCCAGCCCCGGGGGCTTGTTNAGGCGAATGAAAGCTGATGAACTTGCACCCTGCCTGACGTTTGTTCGAAACCCAATAATACGGACGAATGCTCCAGGGTTCGCCTCCTTTGGCTCCCCCGACTCCCTTGACACCTGGGTTGNTTCTGTGCNCCCCAACATTGGCACTTCCCNATGGTCCCATACCTGCCNCCTTTTTCCGGGGATTTTTTTGGTCCCCCCGGTNAAAAATCCACCTTGTTAACNCCAGGGGGGCCCCCCTTGGAANGACNGGTTNCCATTTGTTCCGAGTCCCCCGGNACGGGNGTGAAGTCCAATTTTATCCCCNTCNGC]


>consensus_1206#0 TTTTTTTTTTTTTTTTTTTTTTTTAGCCGGAGCTTCCATATTTTTCATTCACATATGCCT CACCCAACAACATATAGTCGTAGCAGATACCACTTTTACATCAAGTCAAAGAGAGATCGG GGGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAGACGATGAACAAACTGG GAACACACGAAACAAGGTGGGAGACATCATCGAATCAGAGATGAACAATTAAACAAGGCT ATATATGACGATGACGGCTTAGTTGCCACCCAGACTCCTCCCCAGCCCCGGGGGCTTGTT NAGGCGAATGAAAGCTGATGAACTTGCACCCTGCCTGACGTTTGTTCGAAACCCAATAAT ACGGACGAATGCTCCAGGGTTCGCCTCCTTTGGCTCCCCCGACTCCCTTGACACCTGGGT TGNTTCTGTGCNCCCCAACATTGGCACTTCCCNATGGTCCCATACCTGCCNCCTTTTTCC GGGGATTTTTTTGGTCCCCCCGGTNAAAAATCCACCTTGTTAACNCCAGGGGGGCCCCCC TTGGAANGACNGGTTNCCATTTGTTCCGAGTCCCCCGGNACGGGNGTGAAGTCCAATTTT ATCCCCNTCNGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)