These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12090#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1899 fasta sequence [GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG-AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCA-GTA-GCTGCCTTGC-AAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCAATATGACTCGTGGATCCATTTTCTCAGGATTCCCTTCAGAATGGCTTGGTTTTGATCTATACTGAGTACTGTGAAAACTGTCACATTTTGATCCTGCTGCAGCGACTATATCATCTAGACAGTTTCCAGTGTTCTGAGATACAACTACACAAGCGAACAAAACGAAACTTGACACGCTCGTTTCAAAAGCCTTTGTCTGATGTTCTACAATCGGTCCAAAAGGCAAGTATGCGTGCCAAATAACACAAAGAAAACCACGCGAAATGGCGCATATATAGTTTGCCTACTGCCGTGAGCACATATATGGCTACAATTTACAGACTCCAAATTATAAAGAAACATCATTATTGTATTATGTTATTTACATGTTACTCTTAATCATACACGATTGCTGTTTACATCAATTCTATTCTTTACCACTAGGTTTGTTTCTGTTCAATAATATTGCTATCAGGTATTCAGGCAGGAACAT] [+] EMBL AK101489 [GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGATTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCA GTA GCTGCCTTGC AAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCAATATGACTCGTGGATCCATTTTCTCAGGATTCCCTTCAGAATGGCTTGGTTTTGATCTATACTGAGTACTGTGAAAACTGTCACATTTTGATCCTGCTGCAGCGACTATATCATCTAGACAGTTTCCAGTGTTCTGAGATACAACTACACAAGCGAACAAAACGAAACTTGACACGCTCGTTTCAAAAGCCTTTGTCTGATGTTCTACAATCGGTCCAAAAGGCAAGTATGCGTGCCAAATAACACAAAGAAAACCACGCGAAATGGCGCATATATAGTTTGCCTACTGCCGTGAGCACATATATGGCTACAATTTACAGACTCCAAATTATAAAGAAACATCATTATTGTATTATGTTATTTACATGTTACTCTTAATCATACACGATTGCTGTTTACATCAATTCTATTCTTTACCACTAGGTTTGTTTCTGTTCAATAATATTGCTATCAGGTATTCAGGCAGGAACAT] [+] EMBL AK107295 [GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTCGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCA GTA GCTGCCTTGC AAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGTAACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCAATATGACTCGTGGATCCATTTTCTCAGGATTCCCTTCAGAATGGCTTGGTTTTGATCTATACTGAGTACTGTGAAAACTGTCACATTTTGATCCTGCTGCAGCGACTATATCATCTAGACAGTTTCCAGTGTTCTGAGATACAACTACACAAGCGAACAAAACGAAACTTGACACGCTCGTTTCAAAAGCCTTTGTCTGATGTTCTACAATCGGTCCAAAAGGCAAGTATGCGTGCCAAATAACACAAAGAAAACCACGCGAAATGGCGCATATATAGTTTGCCTACTGCCGTGAGCACATATATGGCTACAATTTACAGACTCCAAATTATAAAGAAACATCATTATTGTATTATGTTATTTACATGTTACTCTTAATCATACACG ] [+] EMBL AK060860 [GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCA GTA GCTGCCTTGC AAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAAC ] [+] EMBL CA754884 [GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTTGAGGCATCTG ] [+] EMBL CF309963 [ GGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAA CAT ] [+] EMBL CF312706 [ GGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAAGCTG ] [-] EMBL CA752884 [ CCCAAATATCGTCGGAGTTAAGAAGACAACTTCCAGTAGATCTGGCTGAAAGGGAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAGGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGGAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCAGGTAGGCTGCCTTGCAAAGCGTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCAACATCAAGGAGCCCCACTCCTTTCGGAAC ] consensusID : consensus_12090#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1458 fasta sequence [GGCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTGAAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCAGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAA-ATCTCATGGAATGGCAGTAGCTGCCTTGCAAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCC-ATGCAACTCCTC-CAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCG-CCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCNAAAAAGAAATAAAAAATATAAAACATTTAAAA] [+] EMBL AK064991 [GGCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTGAAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCAGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAA ATCTCATGGAATGGCAGTAGCTGCCTTGCAAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCC ATGCAACTCCTC CAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCG CCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCNAAAAAGAAATAAAAAATATAAAACATTTAAAA] [+] EMBL CA754837 [ GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGC ] [-] EMBL CF312707 [ GGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAANATCTCATGGAATGGCAGTAGCTGCCTTGCAAGCTTCAGAAGAATTTCTGAAAGAAATCAAAAGGGCTTCTGAAGCTTTCCAAATCAACTCCTCNCAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCGCCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTGCGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12090#0 -GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTC 59 consensus_12090#1 GGCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTC 60 *********************************************************** consensus_12090#0 TCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCG 119 consensus_12090#1 TCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCG 120 ************************************************************ consensus_12090#0 CGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCG 179 consensus_12090#1 CGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCG 180 ************************************************************ consensus_12090#0 GCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCA 239 consensus_12090#1 GCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCA 240 ************************************************************ consensus_12090#0 GTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGG 299 consensus_12090#1 GTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGG 300 ************************************************************ consensus_12090#0 ACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTG 359 consensus_12090#1 ACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTG 360 ************************************************************ consensus_12090#0 TCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCC 419 consensus_12090#1 TCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCC 420 ************************************************************ consensus_12090#0 AGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTT 479 consensus_12090#1 AGGTCATACGG--ATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTT 478 *********** *********************************************** consensus_12090#0 GATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAA 539 consensus_12090#1 GATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAA 538 ************************************************************ consensus_12090#0 ATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTGAAGGAAATCTCAAAGCT 599 consensus_12090#1 ATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTGAAGGAAATCTCAAAGCT 598 ************************************************************ consensus_12090#0 CTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGC 659 consensus_12090#1 CTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGC 658 ************************************************************ consensus_12090#0 CCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCAT 719 consensus_12090#1 CCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCAT 718 ************************************************************ consensus_12090#0 CAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTA 779 consensus_12090#1 CAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCAGATGGATGGGGGAAAAAGCATTTA 778 *********************************** ************************ consensus_12090#0 TTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTG 839 consensus_12090#1 TTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTG 838 ************************************************************ consensus_12090#0 ATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCAGTAGCTGCCTTGCAAGCT 899 consensus_12090#1 ATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCAGTAGCTGCCTTGCAAGCT 898 ************************************************************ consensus_12090#0 TCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCA 959 consensus_12090#1 TCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCA 958 ************************************************************ consensus_12090#0 ACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAA 1019 consensus_12090#1 ACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAA 1018 ************************************************************ consensus_12090#0 GATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGA 1079 consensus_12090#1 GATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGA 1078 ************************************************************ consensus_12090#0 ACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCT 1139 consensus_12090#1 ACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCT 1138 ************************************************************ consensus_12090#0 CCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAA 1199 consensus_12090#1 CCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAA 1198 ************************************************************ consensus_12090#0 TGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGT 1259 consensus_12090#1 TGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGT 1258 ************************************************************ consensus_12090#0 ACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAG 1319 consensus_12090#1 ACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAG 1318 ************************************************************ consensus_12090#0 GCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCT 1379 consensus_12090#1 GCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCT 1378 ************************************************************ consensus_12090#0 TTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCAATATGACTCGTG 1439 consensus_12090#1 TTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCNAAAAAG-----A 1433 *********************************************** * * consensus_12090#0 GATCCATTTTCTCAGGATTCCCTTCAGAATGGCTTGGTTTTGATCTATACTGAGTACTGT 1499 consensus_12090#1 AATAAAAAATATAAAA----CATTTAAAA------------------------------- 1458 ** * * * * * ** * ** consensus_12090#0 GAAAACTGTCACATTTTGATCCTGCTGCAGCGACTATATCATCTAGACAGTTTCCAGTGT 1559 consensus_12090#1 ------------------------------------------------------------ consensus_12090#0 TCTGAGATACAACTACACAAGCGAACAAAACGAAACTTGACACGCTCGTTTCAAAAGCCT 1619 consensus_12090#1 ------------------------------------------------------------ consensus_12090#0 TTGTCTGATGTTCTACAATCGGTCCAAAAGGCAAGTATGCGTGCCAAATAACACAAAGAA 1679 consensus_12090#1 ------------------------------------------------------------ consensus_12090#0 AACCACGCGAAATGGCGCATATATAGTTTGCCTACTGCCGTGAGCACATATATGGCTACA 1739 consensus_12090#1 ------------------------------------------------------------ consensus_12090#0 ATTTACAGACTCCAAATTATAAAGAAACATCATTATTGTATTATGTTATTTACATGTTAC 1799 consensus_12090#1 ------------------------------------------------------------ consensus_12090#0 TCTTAATCATACACGATTGCTGTTTACATCAATTCTATTCTTTACCACTAGGTTTGTTTC 1859 consensus_12090#1 ------------------------------------------------------------ consensus_12090#0 TGTTCAATAATATTGCTATCAGGTATTCAGGCAGGAACAT 1899 consensus_12090#1 ---------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||