These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12096#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3224 fasta sequence [TCCTCCTCACTCGGAAAGGAAAAGAGCGCCGCCGCCGCCGGCGTGATGCTTCCCTTCGAGGAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGTGGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCCGACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGGCGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAGGTCCACGACGTGGCCCCCGACCTCCCCGCCCACCACCGCGTCGCCCTCTACGCCTCCCGCGCCGCGCTCTTCCTCTCCCCCCGCGCCCTCGTCGCCGACTTCCTCACCTCCCGCCTCCTCCCCTCCCGCGTCCGCGCCCTCCTCCTCCTCTCCGCCCACCGCTCCTCCGACACCTCCTCCGACGCCTTCGTGGCTCGCCTCCTCCGCCACCACCACCTCCTCCCTGTTTATGCCTTCTCCGATCGCCCCCATGCCATGGTCTCCGGCTTCGCCAAGGCGGAGCGCGCTATGAAGAGCCTCTACATTCGACGCCTCCACCTTTGGCCCCGCTTCCACCTTCTTGCTGCCGCTGACCTCGAGCGCTCCCCGCCCGAGGTCATCGACGTCCGCGTCCCCATGACTCAGCCTATGAGGGGCATCCAGGCCGCTATCCTCGATGCCATGGACGCCTGCCTCAAGGAGCTCAGGCGGACCAACAAGGTCGACGTCGAAGACCTCACCGTCGACAAGGGCCTCTTCAAGTCTTTTGATGAGATCGTCAGGAGGCAGCTCGACCCCATCTGGCACACGCTCGGCAAGAAGACCAAGCAGCTCGTCGCCGACCTCAGGACGCTACGCAAGCTGCTTGATTATCTTGTCAGGTACGATGCTGTGACATACCTTAAGTACCTGGACACACTCAGAGTATCTGAAGGCGTCCGATCTGTTTGGATATTTGCTGACTCAAGCCACAAGATATTCGACCTTTCAAAAAGGCGTGTCTACCAGGTTGTGAGAGCAGACGGTACAAAGGTT-GCAGCAGACAACAAGGGCACACCAACAAAGAAGAGGAAGGTGGCACGCGCTAGCAGCAGGAAAGGAAAAGAAACTGAAAATGAGGGTTCCAGTGATAACAAGGACAATACTCAGAAGGTTAATGCAGAGATGGGCATTGTAGTGGAGGAGATTTTAGAGGAAGCACCTAAATGGAAGGTTTTACGGGAACTATTGCAGGAGATAGCAGAAGAACAGGCAAAGGGAGATGGTGACAATGTAAACCCTGTTCATGAAGACGGAATTAACGAGAGTGGCATAGTTTTGGTAGCATGCAAAGATGAGCGCTCATGCGTGCAGCTGCAAGAATGCATATCAAAAGGCTCGCATCAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTGTCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCTGCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGACAGTGATCAGCATGTACTTGATGTATGGAAACCTTCTGTAATTATCGTTTATCATCCAGATATAACATTTGTTAGAGAAATTGAAGTATACAAGGCAGAAAATCCATCGATGAAGTTAAAAGTTTACTTTCTTTTTTATGAAGATTCTGCCGAGGTACAAAAATTTGAGTCCAGCATTCGCCGGGAAAATGAAGCATTTGAATCTTTGATCAGACAGAAGTCGCTGATGATGATACCTGTTGATCAGAATGGCCGTTGCATTGGACCAACTCTTGCAAATGAACCAGAAGCTCTTTTATCTCAAAATTCACTAACAAGAAAGGCAGGTGGTAGAAAGCCACTAGAGAAGGAGATGCAGGTTATTGTGGACATGAGAGAATTCATGAGCAGTCTTCCTAATGTATTGCACCAGAAAGGTATTCGAATAATACCTGTTACCTTGGAAGTCGGTGACTATGTTCTTTCTCCTTTGATCTGTGTCGAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGATGGTGAAGAGTGATGAATGTACAACCCTTACTAGAAAGCTTGGGTCACTCGGTCGCTAAACCATCTTGCATATGGTGCTGATGTCACAATTTATTTACGAGGCGG] [+] EMBL AK068556 [TCCTCCTCACTCGGAAAGGAAAAGAGCGCCGCCGCCGCCGGCGTGATGCTTCCCTTCGAGGAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGTGGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCCGACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGGCGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAGGTCCACGACGTGGCCCCCGACCTCCCCGCCCACCACCGCGTCGCCCTCTACGCCTCCCGCGCCGCGCTCTTCCTCTCCCCCCGCGCCCTCGTCGCCGACTTCCTCACCTCCCGCCTCCTCCCCTCCCGCGTCCGCGCCCTCCTCCTCCTCTCCGCCCACCGCTCCTCCGACACCTCCTCCGACGCCTTCGTGGCTCGCCTCCTCCGCCACCACCACCTCCTCCCTGTTTATGCCTTCTCCGATCGCCCCCATGCCATGGTCTCCGGCTTCGCCAAGGCGGAGCGCGCTATGAAGAGCCTCTACATTCGACGCCTCCACCTTTGGCCCCGCTTCCACCTTCTTGCTGCCGCTGACCTCGAGCGCTCCCCGCCCGAGGTCATCGACGTCCGCGTCCCCATGACTCAGCCTATGAGGGGCATCCAGGCCGCTATCCTCGATGCCATGGACGCCTGCCTCAAGGAGCTCAGGCGGACCAACAAGGTCGACGTCGAAGACCTCACCGTCGACAAGGGCCTCTTCAAGTCTTTTGATGAGATCGTCAGGAGGCAGCTCGACCCCATCTGGCACACGCTCGGCAAGAAGACCAAGCAGCTCGTCGCCGACCTCAGGACGCTACGCAAGCTGCTTGATTATCTTGTCAGGTACGATGCTGTGACATACCTTAAGTACCTGGACACACTCAGAGTATCTGAAGGCGTCCGATCTGTTTGGATATTTGCTGACTCAAGCCACAAGATATTCGACCTTTCAAAAAGGCGTGTCTACCAGGTTGTGAGAGCAGACGGTACAAAGGTT GCAGCAGACAACAAGGGCACACCAACAAAGAAGAGGAAGGTGGCACGCGCTAGCAGCAGGAAAGGAAAAGAAACTGAAAATGAGGGTTCCAGTGATAACAAGGACAATACTCAGAAGGTTAATGCAGAGATGGGCATTGTAGTGGAGGAGATTTTAGAGGAAGCACCTAAATGGAAGGTTTTACGGGAACTATTGCAGGAGATAGCAGAAGAACAGGCAAAGGGAGATGGTGACAATGTAAACCCTGTTCATGAAGACGGAATTAACGAGAGTGGCATAGTTTTGGTAGCATGCAAAGATGAGCGCTCATGCGTGCAGCTGCAAGAATGCATATCAAAAGGCTCGCATCAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTGTCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCTGCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGACAGTGATCAGCATGTACTTGATGTATGGAAACCTTCTGTAATTATCGTTTATCATCCAGATATAACATTTGTTAGAGAAATTGAAGTATACAAGGCAGAAAATCCATCGATGAAGTTAAAAGTTTACTTTCTTTTTTATGAAGATTCTGCCGAGGTACAAAAATTTGAGTCCAGCATTCGCCGGGAAAATGAAGCATTTGAATCTTTGATCAGACAGAAGTCGCTGATGATGATACCTGTTGATCAGAATGGCCGTTGCATTGGACCAACTCTTGCAAATGAACCAGAAGCTCTTTTATCTCAAAATTCACTAACAAGAAAGGCAGGTGGTAGAAAGCCACTAGAGAAGGAGATGCAGGTTATTGTGGACATGAGAGAATTCATGAGCAGTCTTCCTAATGTATTGCACCAGAAAGGTATTCGAATAATACCTGTTACCTTGGAAGTCGGTGACTATGTTCTTTCTCCTTTGATCTGTGTCGAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAA ] [+] EMBL AK121880 [ CACTCGGAAAGGAAAAGAGCGCCGCCGCCGCCGGCGTGATGCTTCCCTTCGAGGAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGTGGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCCGACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGGCGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAGGTCCACGACGTGGCCCCCGACCTCCCCGCCCACCACCGCGTCGCCCTCTACGCCTCCCGCGCCGCGCTCTTCCTCTCCCCCCGCGCCCTCGTCGCCGACTTCCTCACCTCCCGCCTCCTCCCCTCCCGCGTCCGCGCCCTCCTCCTCCTCTCCGCCCACCGCTCCTCCGACACCTCCTCCGACGCCTTCGTGGCTCGCCTCCTCCGCCACCACCACCTCCTCCCTGTTTATGCCTTCTCCGATCGCCCCCATGCCATGGTCTCCGGCTTCGCCAAGGCGGAGCGCGCTATGAAGAGCCTCTACATTCGACGCCTCCACCTTTGGCCCCGCTTCCACCTTCTTGCTGCCGCTGACCTCGAGCGCTCCCCGCCCGAGGTCATCGACGTCCGCGTCCCCATGACTCAGCCTATGAGGGGCATCCAGGCCGCTATCCTCGATGCCATGGACGCCTGCCTCAAGGAGCTCAGGCGGACCAACAAGGTCGACGTCGAAGACCTCACCGTCGACAAGGGCCTCTTCAAGTCTTTTGATGAGATCGTCAGGAGGCAGCTCGACCCCATCTGGCACACGCTCGGCAAGAAGACCAAGCAGCTCGTCGCCGACCTCAGGACGCTACGCAAGCTGCTTGATTATCTTGTCAGGTACGATGCTGTGACATACCTTAAGTACCTGGACACACTCAGAGTATCTGAAGGCGTCCGATCTGTTTGGATATTTGCTGACTCAAGCCACAAGATATTCGACCTTTCAAAAAGGCGTGTCTACCAGGTTGTGAGAGCAGACGGTACAAAGGTT GCAGCAGACAACAAGGGCACACCAACAAAGAAGAGGAAGGTGGCACGCGCTAGCAGCAGGAAAGGAAAAGAAACTGAAAATGAGGGTTCCAGTGATAACAAGGACAATACTCAGAAGGTTAATGCAGAGATGGGCATTGTAGTGGAGGAGATTTTAGAGGAAGCACCTAAATGGAAGGTTTTACGGGAACTATTGCAGGAGATAGCAGAAGAACAGGCAAAGGGAGATGGTGACAATGTAAACCCTGTTCATGAAGACGGAATTAACGAGAGTGGCATAGTTTTGGTAGCATGCAAAGATGAGCGCTCATGCGTGCAGCTGCAAGAATGCATATCAAAAGGCTCGCATCAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTGTCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCTGCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGACAGTGATCAGCATGTACTTGATGTATGGAAACCTTCTGTAATTATCGTTTATCATCCAGATATAACATTTGTTAGAGAAATTGAAGTATACAAGGCAGAAAATCCATCGATGAAGTTAAAAGTTTACTTTCTTTTTTATGAAGATTCTGCCGAGGTACAAAAATTTGAGTCCAGCATTCGCCGGGAAAATGAAGCATTTGAATCTTTGATCAGACAGAAGTCGCTGATGATGATACCTGTTGATCAGAATGGCCGTTGCATTGGACCAACTCTTGCAAATGAACCAGAAGCTCTTTTATCTCAAAATTCACTAACAAGAAAGGCAGGTGGTAGAAAGCCACTAGAGAAGGAGATGCAGGTTATTGTGGACATGAGAGAATTCATGAGCAGTCTTCCTAATGTATTGCACCAGAAAGGTATTCGAATAATACCTGTTACCTTGGAAGTCGGTGACTATGTTCTTTCTCCTTTGATCTGTGTCGAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGATGGTGAAGAGTGATGAATGTACAACCCTTACTAGAAAGCTTGGGTCA ] [+] EMBL CB643478 [ GCGCCGCCGCCGCCGGCGTGATGCTTCCCTTCGAGGAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGTGGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCCGACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGGCGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAGGTCCACGACGTGGCCCCCGACCTCCCCGCCCACCACCGCGTCGCCCTCTACGCCTCCCGCGCCGCGCTCTTCCTCTCCCCCCGCGCCCTCGTCGCCGACTTCCTCACCTCCCGCCTCCTCCCCTCCCGCGTCCGCGCCCTCCTCCTCCTCTCCGCCCACCGCTCCTCCGACACCTCCTCCGACGCCTTCGTGGCTCGCCTCCTCCGCCACCACCACCTCCTCCCTGTTTATGCCTTCTCCGATCGCCCCCATGCCATGGTCTCCGGCTTCGCCAAGGCGGAGCGCGCTATGAAGAGCCTCTACATTCGACGCCTCCACCTTTGGCCCCGCTTCCACCTTCTTGCTGCCGCTGACCTCGAGCGCTCCCCGCCCGAGGTCATCGACGTCCGCGTCCCCATGACTCAGCCTATGAGGGGCATCCAGGCCGCTATCCTCGATGCCATGGACGCCTGC ] [+] EMBL CB640735 [ CCCTTCGAGGAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGTGGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCCGACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGGCGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAAGTCCACGACGTGGCCCCCGACCTTCCCGCCCACCACCGCG ] [+] EMBL CB628383 [ AAGGTTCTTATCAGACAACAAGGGCACACCAACAAAGAAGAGGAAGGTGGCACGCGCTAGCAGCAGGAAAGGAAAAGAAACTGAAAATGAGGGTTCCAGTGATAACAAGGACAATACTCAGAAGGTTAATGCAGAGATGGGCATTGTAGTGGAGGAGATTTTAGAGGAAGCACCTAAATGGAAGGTTTTACGGGAACTATTGCAGGAGATAGCAGAAGAACAGGCAAAGGGAGATGGTGACAATGTAAACCCTGTTCATGAAGACGGAATTAACGAGAGTGGCATAGTTTTGGTAGCATGCAAAGATGAGCGCTCATGCGTGCAGCTGCAAGAATGCATATCAAAAGGCTCGCATCAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCANGAAAAACTCATGAACAGGCTGAGACTGATGCTTtgt ] [-] EMBL CB642506 [ CGAATAATACCTGTTACCTTGGAAGTCGGTGACTATGTTCTTTCTCCTTTGATCTGTGTCGAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATGTTAAGATGTGGATGGTGAAGAGTGATGAATGTAAAAaaaaga ] [-] EMBL CB628384 [ GAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGATGGTGAAGAGTGATGAATGTACAACCCTTACTAGAAAGCTTGGGTCACTCGGTCGCTAAACCATCTTGCATATGGTGCTGATGTCACAATTTATTTACGAGGCGG] [-] EMBL CB643479 [ TATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGATGGTGAAGAGTGATGAATGTACAACCCTTACTAGAAAGCTTGGGTCACTCGGTCGCTAAA ] [-] EMBL CB639079 [ CCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCAGC TACGGAAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCAAGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGATGGTGAAGAGTGATGAATGTACA ] consensusID : consensus_12096#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence [CTTGTTTTTAACAAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTGTCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCTGCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGACAGTGATCAGCATGTACTTGATGTATGGAAACCTT] [+] EMBL CB664077 [CTTGTTTTTAACAAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTGTCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCTGCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGACAGTGATCAGCATGTACTTGATGTATGGAAACCTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12096#0 TCCTCCTCACTCGGAAAGGAAAAGAGCGCCGCCGCCGCCGGCGTGATGCTTCCCTTCGAG 60 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGT 120 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCC 180 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGG 240 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAGGTCCACGACGTG 300 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GCCCCCGACCTCCCCGCCCACCACCGCGTCGCCCTCTACGCCTCCCGCGCCGCGCTCTTC 360 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CTCTCCCCCCGCGCCCTCGTCGCCGACTTCCTCACCTCCCGCCTCCTCCCCTCCCGCGTC 420 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CGCGCCCTCCTCCTCCTCTCCGCCCACCGCTCCTCCGACACCTCCTCCGACGCCTTCGTG 480 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GCTCGCCTCCTCCGCCACCACCACCTCCTCCCTGTTTATGCCTTCTCCGATCGCCCCCAT 540 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GCCATGGTCTCCGGCTTCGCCAAGGCGGAGCGCGCTATGAAGAGCCTCTACATTCGACGC 600 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CTCCACCTTTGGCCCCGCTTCCACCTTCTTGCTGCCGCTGACCTCGAGCGCTCCCCGCCC 660 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GAGGTCATCGACGTCCGCGTCCCCATGACTCAGCCTATGAGGGGCATCCAGGCCGCTATC 720 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CTCGATGCCATGGACGCCTGCCTCAAGGAGCTCAGGCGGACCAACAAGGTCGACGTCGAA 780 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GACCTCACCGTCGACAAGGGCCTCTTCAAGTCTTTTGATGAGATCGTCAGGAGGCAGCTC 840 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GACCCCATCTGGCACACGCTCGGCAAGAAGACCAAGCAGCTCGTCGCCGACCTCAGGACG 900 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CTACGCAAGCTGCTTGATTATCTTGTCAGGTACGATGCTGTGACATACCTTAAGTACCTG 960 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GACACACTCAGAGTATCTGAAGGCGTCCGATCTGTTTGGATATTTGCTGACTCAAGCCAC 1020 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 AAGATATTCGACCTTTCAAAAAGGCGTGTCTACCAGGTTGTGAGAGCAGACGGTACAAAG 1080 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GTTGCAGCAGACAACAAGGGCACACCAACAAAGAAGAGGAAGGTGGCACGCGCTAGCAGC 1140 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 AGGAAAGGAAAAGAAACTGAAAATGAGGGTTCCAGTGATAACAAGGACAATACTCAGAAG 1200 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GTTAATGCAGAGATGGGCATTGTAGTGGAGGAGATTTTAGAGGAAGCACCTAAATGGAAG 1260 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GTTTTACGGGAACTATTGCAGGAGATAGCAGAAGAACAGGCAAAGGGAGATGGTGACAAT 1320 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GTAAACCCTGTTCATGAAGACGGAATTAACGAGAGTGGCATAGTTTTGGTAGCATGCAAA 1380 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GATGAGCGCTCATGCGTGCAGCTGCAAGAATGCATATCAAAAGGCTCGCATCAGGTCATG 1440 consensus_12096#1 ---------------------------------------CTTGTTTTTAACAAGGTCATG 21 * * * ******** consensus_12096#0 CGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAG 1500 consensus_12096#1 CGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAG 81 ************************************************************ consensus_12096#0 AACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATG 1560 consensus_12096#1 AACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATG 141 ************************************************************ consensus_12096#0 AGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTT 1620 consensus_12096#1 AGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTT 201 ************************************************************ consensus_12096#0 GCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAAT 1680 consensus_12096#1 GCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAAT 261 ************************************************************ consensus_12096#0 GTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACC 1740 consensus_12096#1 GTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACC 321 ************************************************************ consensus_12096#0 ATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTG 1800 consensus_12096#1 ATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTG 381 ************************************************************ consensus_12096#0 GAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTG 1860 consensus_12096#1 GAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTG 441 ************************************************************ consensus_12096#0 TCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCT 1920 consensus_12096#1 TCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCT 501 ************************************************************ consensus_12096#0 GCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGAC 1980 consensus_12096#1 GCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGAC 561 ************************************************************ consensus_12096#0 AGTGATCAGCATGTACTTGATGTATGGAAACCTTCTGTAATTATCGTTTATCATCCAGAT 2040 consensus_12096#1 AGTGATCAGCATGTACTTGATGTATGGAAACCTT-------------------------- 595 ********************************** consensus_12096#0 ATAACATTTGTTAGAGAAATTGAAGTATACAAGGCAGAAAATCCATCGATGAAGTTAAAA 2100 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GTTTACTTTCTTTTTTATGAAGATTCTGCCGAGGTACAAAAATTTGAGTCCAGCATTCGC 2160 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CGGGAAAATGAAGCATTTGAATCTTTGATCAGACAGAAGTCGCTGATGATGATACCTGTT 2220 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GATCAGAATGGCCGTTGCATTGGACCAACTCTTGCAAATGAACCAGAAGCTCTTTTATCT 2280 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CAAAATTCACTAACAAGAAAGGCAGGTGGTAGAAAGCCACTAGAGAAGGAGATGCAGGTT 2340 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 ATTGTGGACATGAGAGAATTCATGAGCAGTCTTCCTAATGTATTGCACCAGAAAGGTATT 2400 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CGAATAATACCTGTTACCTTGGAAGTCGGTGACTATGTTCTTTCTCCTTTGATCTGTGTC 2460 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAG 2520 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 ATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGAC 2580 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 AAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATA 2640 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 ATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGC 2700 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 AGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGAT 2760 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTG 2820 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 AGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACA 2880 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTT 2940 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAA 3000 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 TTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTT 3060 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGAT 3120 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 GGTGAAGAGTGATGAATGTACAACCCTTACTAGAAAGCTTGGGTCACTCGGTCGCTAAAC 3180 consensus_12096#1 ------------------------------------------------------------ consensus_12096#0 CATCTTGCATATGGTGCTGATGTCACAATTTATTTACGAGGCGG 3224 consensus_12096#1 -------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||