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Oryza sativa
cluster # 12174 cluster # 12174       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12174#0 length = 1380 sequences # 9  
consensus_12174#1 length = 765 sequences # 1  

consensusID : consensus_12174#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1380
fasta sequence
                              [GCCGCGCGCCGCAGGAAAAAGGTGGAAAACCACCGCCCACGCGGGACGCGCCGCCGCCGCCGCTCGCCGCCGCACCCTCACGCGCAGAGGAGGAGCCCCCCCGCCGGAGCACCTCCACCTGTTTACTCTGAGTGACATGTCCCCCTCGCCGCTGCTCGCCCGGCCGCCGGCGCCGTCGAGCCCGAGCACGTACCCGTCCCTCCCGCCTCGCCGGTGCGCCCCGGCTGTAGCTTCCGCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGATGTGAAAACCGAGAAGATTGTGGTGTTGGGAGGGAGTGGATTCGTTGGCTCTGCTATCTGCAAAGCTGCTGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTCAGGGAGACCATCTTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGAGATGTTTTCTATGCAAGATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAATGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAAAGAATTTGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCA-AGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGCTTTGATGGCAAAGGCCAATGCGCTTCATTTCTTACGAGATGCATTGCCAAATGAATGTTCTT-CTGGAGTACTTGTTTAAGGTGGAAGTAATCNCTGATTCTCTGAACCTAAAAAAAAAAA]

[+] EMBL AK058428             [GCCGCGCGCCGCAGGAAAAAGGTGGAAAACCACCGCCCACGCGGGACGCGCCGCCGCCGCCGCTCGCCGCCGCACCCTCACGCGCAGGGGAGGAGCCCCCCCGCCGGAGCACCTCCACCTGTTTACTCTGAGTGACATGTCCCCCTCGCCGCTGCTCGCCCGGCCGCCGGCGCCGTCGAGCCCGAGCACGTACCCGTCCCTCCCGCCTCGCCGGTGCGCCCCGGCTGTAGCTTCCGCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGATGTGAAAACCGAGAAGATTGTGGTGTTGGGAGGGAGTGGATTCGTTGGCTCTGCTATCTGCAAAGCTGCTGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTCAGGGAGACCATCTTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGAGATGTTTTCTATGCAAGATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAATGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAAAGAATTTGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTATTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCA AGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGCTTTGATGGCAAAGGCCAATGCGCTTC                                                                                               ]
[+] EMBL AK099117             [                  AAGGTGGAAAACCACCGCCCACGCGGGACGCGCCGCCGCCGCCGCTCGCCGCCGCACCCTCACGCGCAGAGGAGGAGCCCCCCCGCCGGAGCACCTCCACCTGTTTACTCTGAGTGACATGTCCCCCTCGCCGCTGCTCGCCCGGCCGCCGGCGCCGTCGAGCCCGAGCACGTACCCGTCCCTCCCGCCTCGCCGGTGCGCCCCGGCTGTAGCTTCCGCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGATGTGAAAACCGAGAAGATTGTGGTGTTGGGAGGGAGTGGATTCGTTGGCTCTGCTATCTGCAAAGCTGCTGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTCAGGGAGACCATCTTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGAGATGTTTTCTATGCAAGATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAATGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAAAGAATTTGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCA AGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATG                                                                                                                            ]
[+] EMBL CB653482             [                              CACCGCCCACGCGGGACGCGCCGCCGCCGCCGCTCGCCGCCGCACCCTCACGCGCAGAGGAGGAGCCCCCCCGCCGGAGCACCTCCACCTGTTTACTCTGAGTGACATGTCCCCCTCGCCGCTGCTCGCCCGGCCGCCGGCGCCGTCGAGCCCGAGCACGTACCCGTCCCTCCCGCCTCGCCGGTGCGCCCCGGCTGTAGCTTCCGCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGATGTGAAAACCGAGAAGATTGTGGTGTTGGGAGGGAGTGGATTCGTTGGCTCTGCTATCTGCAAAGCTGCTGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTCAGGGAGACCATCTTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGAGATGTTTTCTATGCAAGATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAATGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAAAGAATTTGGAATCCCCACATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB684081             [                                  GCCCACGCCGGACGCGCCGCCGCCGCCGCTCGCCGCCGCACCCTCACGCGCAGAGGAGGAGCCCCCCCGCCGGAGCACCTCCACCTGTTTACTCTGAGTGACATGTCCCCCTCGCCGCTGCTCGCCCGGCCGCCGGCGCCGTCGAGCCCGAGCACGTACCCGTCCCTCCCGCCTCGCCGGTGCGCCCCGGCTGTAGCTTCCGCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGATGTGAAAACCGAGAAGATTGTGGTGTTGGGAGGGAGTGGATTCGTTGGCTCTGCTATCTGCAAAGCTGCTGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTCAGGGAGACCATCTTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGAGATGTTTTCTATGCAAGATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAATGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAAAGAATTTGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK103149             [                                                    GCCGCCGCCGCTCGCCGCCGCACCCTCACGCGCAGAGGAGGAGCCCCCCCGCCGGAGCACCTCCACCTGTTTACTCTGAGTGACATGTCCCCCTCGCCGCTGCTCGCCCGGCCGCCGGCGCCGTCGAGCCCGAGCACGTACCCGTCCCTCCCGCCTCGCCGGTGCGCCCCGGCTGTAGCTTCCGCGGCGCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGGCTGGTGACCAAGCGGAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGATGTGAAAACCGAGAAGATTGTGGTGTTGGGAGGGAGTGGATTCGTTGGCTCTGCTATCTGCAAAGCTGCTGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTCAGGGAGACCATCTTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGAGATGTTTTCTATGCAAGATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAATGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAAAGAATTTGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCA AGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGCTTTGATGGCAAAGGCCAATGCGCTTCATTTCTTACGAGATGCATTGCCAAATGAATGTTCTT CTGGA                                                     ]
[-] EMBL CB684082             [                                                                                                                                                                                                                                                                                                                                                                                                                                             TGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTCAGGGAGACCATCTTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGAGATGTTTTCTATGCAAGATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAATGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAAAGAATTTGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCA AGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACAGTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAG                                                                                                                                                                         ]
[-] EMBL CB653483             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGGAGACCATCTTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGAGATGTTTTCTATGCAAGATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAATGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAAAGAATTTGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCA AGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGGTTTGATGGCAAAGGCCAATGCGCTTCATTTCT                                                                                         ]
[+] EMBL BQ908254             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCNAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCACAGATGGAAGATTC AACATGCGGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTC AAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGCTTTGATGGC AAGGCC ATGCGCTTCATTTCTTACGAGATGC TTGCC AATGAATGTTCTTCCTGGAGTACTTGTTTAAGGTGGAAGTAATCNCTGATTCTCTGAACCTAAAAAAAAAAA]
[+] EMBL AA751818             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ntcAAAGTAAGAGTGTAANCTGGGAGTCTTTATTGCCA AGATGGAAGATTCCCACATGCGGATCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGCTTTGATGGCAAAGGCCAATGCGCTTCATTTCTT                                                                                        ]


>consensus_12174#0 GCCGCGCGCCGCAGGAAAAAGGTGGAAAACCACCGCCCACGCGGGACGCGCCGCCGCCGC CGCTCGCCGCCGCACCCTCACGCGCAGAGGAGGAGCCCCCCCGCCGGAGCACCTCCACCT GTTTACTCTGAGTGACATGTCCCCCTCGCCGCTGCTCGCCCGGCCGCCGGCGCCGTCGAG CCCGAGCACGTACCCGTCCCTCCCGCCTCGCCGGTGCGCCCCGGCTGTAGCTTCCGCGGC GCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGGCTGGTGACCAAGCG GAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGA TGTGAAAACCGAGAAGATTGTGGTGTTGGGAGGGAGTGGATTCGTTGGCTCTGCTATCTG CAAAGCTGCTGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTCAGGGAGACCATC TTACTCTGATCCTTGGGTTGATCAAGTTACTTGGCTAGCAGGAGATGTTTTCTATGCAAG ATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTAA TGAAGAACAGATGAAAAGGATAAACGGTGAGGCAAATGTAACAGCAGTAGATGCTGCAAA AGAATTTGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTT TCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAA ATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGA TGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCTGT TGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCC AGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTT TGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGG GAGTCTTTATTGCCAAGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCCCT GTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTCAA AACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGC TTTGATGGCAAAGGCCAATGCGCTTCATTTCTTACGAGATGCATTGCCAAATGAATGTTC TTCTGGAGTACTTGTTTAAGGTGGAAGTAATCNCTGATTCTCTGAACCTAAAAAAAAAAA



consensusID : consensus_12174#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 765
fasta sequence
                              [TTGTACTGATTACTATGACAGATTAAATACCTCAAACAGCTGGAACTTATCCCTCGTACAACTGTGCCACTGTCTCGTTAACCTACTCTTTCCTTTTTTATTGAAACGGATAAAATAATGTAACATAGCTTCTTTGGTGTATTCTTCTGCAGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCAAGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGCTTTGATGGCAAAAAAAAAAGA]

[-] EMBL CB626378             [TTGTACTGATTACTATGACAGATTAAATACCTCAAACAGCTGGAACTTATCCCTCGTACAACTGTGCCACTGTCTCGTTAACCTACTCTTTCCTTTTTTATTGAAACGGATAAAATAATGTAACATAGCTTCTTTGGTGTATTCTTCTGCAGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCAAGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGGGCTTTGATGGCAAAAAAAAAAGA]


>consensus_12174#1 TTGTACTGATTACTATGACAGATTAAATACCTCAAACAGCTGGAACTTATCCCTCGTACA ACTGTGCCACTGTCTCGTTAACCTACTCTTTCCTTTTTTATTGAAACGGATAAAATAATG TAACATAGCTTCTTTGGTGTATTCTTCTGCAGGAATCCCCAAATTCATTTTAATTTCTGT TCATGATTACAATCTTCCATCCTTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAA GGCTGAATCTGAAGTCCTCTCCAAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTT CATTTATGGTAAAAGGAAAGTAGATGGTTTTGAGATACCACTCGATGTTGTAGGACAACC ATTAGAAAAGCTACTTTCCTCTGTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGC TTCTGACTTACTCCTTGCACCCCCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAA TGGAGTTATAGATGACAGCTTCTTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGC GGCGAAAGTAAGAGTGTAAACTGGGAGTCTTTATTGCCAAGATGGAAGATTCAAACATGC GGCTCCTTATTAAGAGATATCCCTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACA TTCAATGGTTAAAGTTAAATTCAAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCC TCCAAGCAGAGAGGAAGAATGGGCTTTGATGGCAAAAAAAAAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12174#0      GCCGCGCGCCGCAGGAAAAAGGTGGAAAACCACCGCCCACGCGGGACGCGCCGCCGCCGC 60
consensus_12174#1      ------------------------------------------------------------
                                                                                   

consensus_12174#0      CGCTCGCCGCCGCACCCTCACGCGCAGAGGAGGAGCCCCCCCGCCGGAGCACCTCCACCT 120
consensus_12174#1      ------------------------------------------------------------
                                                                                   

consensus_12174#0      GTTTACTCTGAGTGACATGTCCCCCTCGCCGCTGCTCGCCCGGCCGCCGGCGCCGTCGAG 180
consensus_12174#1      ------------------------------------------------------------
                                                                                   

consensus_12174#0      CCCGAGCACGTACCCGTCCCTCCCGCCTCGCCGGTGCGCCCCGGCTGTAGCTTCCGCGGC 240
consensus_12174#1      ------------------------------------------------------------
                                                                                   

consensus_12174#0      GCTCCGCGTGGCTCCAGCCACCGCCTCCCGAGCCCCATTCTCCAGGCTGGTGACCAAGCG 300
consensus_12174#1      ------------------------------------------------------------
                                                                                   

consensus_12174#0      GAATTTCGCTGCGTCTGATATTAGAGAAGACTACTCCACTCCGATTGACGTCGTTGCCGA 360
consensus_12174#1      ------------------------------------------------------------
                                                                                   

consensus_12174#0      TGTGAAAACCGAGAAGATTGTGGTGTTGGGAGGGAGTGGATTCGTTGGCTCTGCTATCTG 420
consensus_12174#1      ------------------------------------------------------------
                                                                                   

consensus_12174#0      CAAAGCTGCTGTCTCTAAGGGTATTGAGGTTGTGAGCCTCAGCAGGTCAGGGAGACCATC 480
consensus_12174#1      ------------------------------------------------------------
                                                                                   

consensus_12174#0      TTACTCTGATCCTTGGGTTGATCAAGTTAC-TTGGCTAGCAGGAGATGTTTTCTATGCAA 539
consensus_12174#1      --------------------------TTGTACTGATTACTATGACAGATTAAATACCTCA 34
                                                 **    **  **  * ** *  **   **    *

consensus_12174#0      GATGGGATGAAGTGTTAGTTGGTGCCACTGCTGTTGTGTCTACCCTTGGAGGATTCGGTA 599
consensus_12174#1      AACAGCTGGAACTTATCCCTCGTACAACTGTGCCACTGTCT--CGTTAACCTACTCTTTC 92
                        *  *   *** *  *   * ** * ****      *****  * **     * **  * 

consensus_12174#0      ATGAAGAACAGATGAAAAGGATAAA-CGGTGAGGCAAATGTAACAGCAGTAGATGCTGCA 658
consensus_12174#1      CTTTTTTAT---TGAAACGGATAAAATAATGTAACATA-GCTTCTTTGGTGTATTCTTCT 148
                        *     *    ***** *******    **   ** * *   *    **  ** ** * 

consensus_12174#0      AAAGAATTTGGAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCC 718
consensus_12174#1      GCAG------GAATCCCCAAATTCATTTTAATTTCTGTTCATGATTACAATCTTCCATCC 202
                         **      **************************************************

consensus_12174#0      TTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCC 778
consensus_12174#1      TTTCTTCTTAACTCGGGTTACTTCACTGGTAAGAGAAAGGCTGAATCTGAAGTCCTCTCC 262
                       ************************************************************

consensus_12174#0      AAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTA 838
consensus_12174#1      AAATACCCAACCTCAGGTGTTGTACTGAGGCCTGGTTTCATTTATGGTAAAAGGAAAGTA 322
                       ************************************************************

consensus_12174#0      GATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCT 898
consensus_12174#1      GATGGTTTTGAGATACCACTCGATGTTGTAGGACAACCATTAGAAAAGCTACTTTCCTCT 382
                       ************************************************************

consensus_12174#0      GTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCC 958
consensus_12174#1      GTTGAAAATTTCACAAAACCGCTGAGTTCATTGCCAGCTTCTGACTTACTCCTTGCACCC 442
                       ************************************************************

consensus_12174#0      CCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTC 1018
consensus_12174#1      CCAGTGAGTGTGGATGATGTTGCCTATGCTGTGATCAATGGAGTTATAGATGACAGCTTC 502
                       ************************************************************

consensus_12174#0      TTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACT 1078
consensus_12174#1      TTTGGTGTCTTCACGATTGAGCAAATCAAGGAAGCCGCGGCGAAAGTAAGAGTGTAAACT 562
                       ************************************************************

consensus_12174#0      GGGAGTCTTTATTGCCAAGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCC 1138
consensus_12174#1      GGGAGTCTTTATTGCCAAGATGGAAGATTCAAACATGCGGCTCCTTATTAAGAGATATCC 622
                       ************************************************************

consensus_12174#0      CTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTC 1198
consensus_12174#1      CTGTTCTGTCTTGCACTCTTGCAGTCTTAGATCATACATTCAATGGTTAAAGTTAAATTC 682
                       ************************************************************

consensus_12174#0      AAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGG 1258
consensus_12174#1      AAAACTTTGTACAGTGTATGAATGTGGTGCTTGTTCCCTCCAAGCAGAGAGGAAGAATGG 742
                       ************************************************************

consensus_12174#0      GCTTTGATGGCAAAGGCCAATGCGCTTCATTTCTTACGAGATGCATTGCCAAATGAATGT 1318
consensus_12174#1      GCTTTGATGGCAAAAAAAAAAGA------------------------------------- 765
                       **************    ** *                                      

consensus_12174#0      TCTTCTGGAGTACTTGTTTAAGGTGGAAGTAATCNCTGATTCTCTGAACCTAAAAAAAAA 1378
consensus_12174#1      ------------------------------------------------------------
                                                                                   

consensus_12174#0      AA 1380
consensus_12174#1      --
                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)