These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12182#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2638 fasta sequence [AGCAGAAAACCCCAAATCCCGCGGTTCCCCCGCGCCGCAAAAATCATCCATGGCTTCTCCGCCGCCACCGGCGGCCGCCGCCGCCGCGAGCCCGAAGCGGAAACCCAAGCCCAAGCCGAAGGCAGCCGGCGCCTCCACCCTAAACCCTAACTGGGCGCAGCTCCAGTCCAAGCTCCCCCGCCCCGTCGCCGCCACCACCCTCGGCAAGCGCAAGCACCGCCCCGACCACCCTTCTCCGGCCCCCGCGCCCACCGAGCCCGCCGCGGAGGAGGAGGCGGCGGAGGTCAAGCTCGTGCCCACCTCCGACGACACCAGCTTGACGAAGGCGGTCGCTGTGGATTGCGAGATGGTCGGGGTCGGCGCAGGCGGCAGCAAGAGCGCCCTCGGCAGAGTCACCTTGGTTAACTCTTGGGGTAACGTTGTATATGATGAATATACAAGACCGGTAGAGCGGATTGTTGACTACCGTACCCATATTAGTGGGATTAGACCGAAGCACATGAATAAAGCCAAAGATTTCTGGGTTGTTCAGAAAGATGTAGCTGAGCTGATCAAAGGAAGAATTCTTGTTGGGCATGCCTTGCACCATGATCTTAAGGTTTTGCTACTAGGCCACCCAAAGAAGGACATAAGGGATACCTCAGAATATGAGGTTTTTCGAAGGGAAGGGAAGAGGAGATCACTGAAAGATCTTACTGCTCAAGTACTTGGTGCTAAAATACAACAGAAAGAGCATTGCCCAATTGAGGATGCTCGTGCAGCAATGTTCATTTACAACAAGCATAAGAAAGTATGGGAGAAGAATATGAAAGAACAATTCAGATTTAGAAAGAAGCTCAAGAAGCGAGGCAAGAAGAAATCTGCTGAAGGCAGTGGGAATGATCCTAATGTTCCCACGGTTCTTCTATAGAGGATGGATTTAGGAAGCTAGTGTGATGCATTGCCCTACCTGACATGAATTTGAAGATGCCA-AAGGCTATTTGTGTGAGATTCTCATGGAACTTAAATGAGGCAGTATGCTGACCCAAGATGTGGTGCAGCTCAATCATGATGAACATCAACACATTTCTCGATGACAGTGTCACGATTCCATGGATTTATCACATTTCATGTAGTAGCATTTGTTTTAGGGAAGC-AATATTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAGTGCACGGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCCGGGACATCAGAATCCAGCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTGCATCTCCAGAGGAAACAGGTCTGAAAATTTCTGATTTTGATGCCATGTTATGTTACCTCAGCAGGGTTGGAATACCGGTAGTATCTCCAGAATTAGTGGCTCCAAAAATTCAACTTTAAAGATTCAAATGCAAAAGGTATTTACAGAGGCTGGTTTCAGAGGTGAGCAGCAGCTGAAGCCTGAAGGGAAGCTAACCTTGCAGAGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCAGACGAGAAGGGAGATGTACTTCACGGTGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGCTGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCGACGCCGAGATGTTGCTGGAGATGACGCTCAGTGCCAGCCCCGTCTCGTCCGGGCTCGCCTGCAACGACAGCAACACGGTAAATCACCAACCTCCCATCACCACGGCCACACTTGGATTCAGCTGTTCAGTTGTCACAGAAAATTCAGTTGCTCCATGTCGCCGGCGGCCGGCGGTGGGTGGTTTACCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGAGTGGTGGAGCTGGGTTGCTTATGGATTAATGGATAGGATCAGTACGTGGTACCAACGGTACATTCTGGCTTGGCTTGTCGCTTGGGATCAAAGACTTGGGAGGAGGGTCAGGCAAGCAAAATTCATGGAGCTTGCTTCCAAGAAATCCAGGCAATTGTTGCTTCCCGGGTTACTGTATCTCCTAACCTTCCAAGATCCGAAACCCAACTTGCATAAAGCTACATGTCAAAATCAATAATTTATGATTTAAATATAATATAAATAAATTTCTATGG] [+] EMBL AK120163 [AGCAGAAAACCCCAAATCCCGCGGTTCCCCCGCGCCGCAAAAATCATCCATGGCTTCTCCGCCGCCACCGGCGGCCGCCGCCGCCGCGAGCCCGAAGCGGAAACCCAAGCCCAAGCCGAAGGCAGCCGGCGCCTCCACCCTAAACCCTAACTGGGCGCAGCTCCAGTCCAAGCTCCCCCGCCCCGTCGCCGCCACCACCCTCGGCAAGCGCAAGCACCGCCCCGACCACCCTTCTCCGGCCCCCGCGCCCACCGAGCCCGCCGCGGAGGAGGAGGCGGCGGAGGTCAAGCTCGTGCCCACCTCCGACGACACCAGCTTGACGAAGGCGGTCGCTGTGGATTGCGAGATGGTCGGGGTCGGCGCAGGCGGCAGCAAGAGCGCCCTCGGCAGAGTCACCTTGGTTAACTCTTGGGGTAACGTTGTATATGATGAATATACAAGACCGGTAGAGCGGATTGTTGACTACCGTACCCATATTAGTGGGATTAGACCGAAGCACATGAATAAAGCCAAAGATTTCTGGGTTGTTCAGAAAGATGTAGCTGAGCTGATCAAAGGAAGAATTCTTGTTGGGCATGCCTTGCACCATGATCTTAAGGTTTTGCTACTAGGCCACCCAAAGAAGGACATAAGGGATACCTCAGAATATGAGGTTTTTCGAAGGGAAGGGAAGAGGAGATCACTGAAAGATCTTACTGCTCAAGTACTTGGTGCTAAAATACAACAGAAAGAGCATTGCCCAATTGAGGATGCTCGTGCAGCAATGTTCATTTACAACAAGCATAAGAAAGTATGGGAGAAGAATATGAAAGAACAATTCAGATTTAGAAAGAAGCTCAAGAAGCGAGGCAAGAAGAAATCTGCTGAAGGCAGTGGGAATGATCCTAATGTTCCCACGGTTCTTCTATAGAGGATGGATTTAGGAAGCTAGTGTGATGCATTGCCCTACCTGACATGAATTTGAAGATGCCA AAGGCTATTTGTGTGAGATTCTCATGGAACTTAAATGAGGCAGTATGCTGACCCAAGATGTGGTGCAGCTCAATCATGATGAACATCAACACATTTCTCGATGACAGTGTCACGATTCCATGGATTTATCACATTTCATGTAGTAGCATTTGTTTTAGGGAAGC AATATTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAGTGCACGGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCCGGGACATCAGAATCCAGCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTGCATCTCCAGAGGAAACAGGTCTGAAAATTTCTGATTTTGATGCCATGTTATGTTACCTCAGCAGGGTTGGAATACCGGTAGTATCTCCAGAATTAGTGGCTCCAAAAATTCAACTTTAAAGATTCAAATGCAAAAGGTATTTACAGAGGCTGGTTTCAGAGGTGAGCAGCAGCTGAAGCCTGAAGGGAAGCTAACCTTGCAGAGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCAGACGAGAAGGGAGATGTACTTCACGGTGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGCTGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCGACGCCGAGATGTTGCTGGAGATGACGCTCAGTGCCAGCCCCGTCTCGTCCGGGCTCGCCTGCAACGACAGCAACACGGTAAATCACCAACCTCCCATCACCACGGCCACACTTGGATTCAGCTGTTCAGTTGTCACAGAAAATTCAGTTGCTCCATGTCGCCGGCGGCCGGCGGTGGGTGGTTTACCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGAGTGGTGGAGCTGGGTTGCTTATGGATTAATGGATAGGATCAGTACGTGGTACCAACGGTACATTCTGGCTTGGCTTGTCGCTTGGGATCAAAGACTTGGGAGGAGGGTCAGGCAAGCAAAATTCATGGAGCTTGCTTCCAAGAAATCCAGGCAATTGTTGCTTCCCGGGTTACTGTATCTCCTAACCTTCCAAGATCCGAAACCCAACTTGCATAAAGCTACATGTCAAAATCAATAATTTATGATTTAAATATAATATAAATAAATTTCTATGG] [+] EMBL AK105467 [ AGAAAACCCCAAATCCCGCGGTTCCCCCGCGCCGCAAAAATCATCCATGGCTTCTCCGCCGCCACCGGCG GCCGCCGCCGCGAGCCCGAAGCGGAAACCCAAGCCCAAGCCGAAGGCAGCCGGCGCCTCCACCCTAAACCCTAACTGGGCGCAGCTCCAGTCCAAGCTCCCCCGCCCCGTCGCCGCCACCACCCTCGGCAAGCGCAAGCACCGCCCCGACCACCCTTCTCCGGCCCCCGCGCCCACCGAGCCCGCCGCGGAGGAGGAGGCGGCGGAGGTCAAGCTCGTGCCCACCTCCGACGACACCAGCTTGACGAAGGCGGTCGCTGTGGATTGCGAGATGGTCGGGGTCGGCGCAGGCGGCAGCAAGAGCGCCCTCGGCAGAGTCACCTTGGTTAACTCTTGGGGTAACGTTGTATATGATGAATATACAAGACCGGTAGAGCGGATTGTTGACTACCGTACCCATATTAGTGGGATTAGACCGAAGCACATGAATAAAGCCAAAGATTTCTGGGTTGTTCAGAAAGATGTAGCTGAGCTGATCAAAGGAAGAATTCTTGTTGGGCATGCCTTGCACCATGATCTTAAGGTTTTGCTACTAGGCCACCCAAAGAAGGACATAAGGGATACCTCAGAATATGAGGTTTTTCGAAGGGAAGGGAAGAGGAGATCACTGAAAGATCTTACTGCTCAAGTACTTGGTGCTAAAATACAACAGAAAGAGCATTGCCCAATTGAGGATGCTCGTGCAGCAATGTTCATTTACAACAAGCATAAGAAAGTATGGGAGAAGAATATGAAAGAACAATTCAGATTTAGAAAGAAGCTCAAGAAGCGAGGCAAGAAGAAATCTGCTGAAGGCAGTGGGAATGATCCTAATGTTCCCACGGTTCTTCTATAGAGGATGGATTTAGGAAGCTAGTGTGATGCATTGCCCTACCTGACATGAATTTGAAGATGCCA AAGGCTATTTGTGTGAGATTCTCATGGAACTTAAATGAGGCAGTATGCTGACCCAAGATGTGGTGCAGCTCAATCATGATGAACATCAACACATTTCTCGATGACAGTGTCACGATTCCATGGATTTATCACATTTCATGTAGTAGCATTTGTTTTAGGGAAGC AATATTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTAT ] [+] EMBL BM037696 [ TTGAGGATGCTCG CCACCAATGTTCATTTACAACAAGCATAAGAAAGTATGGGAGAAGAATATGAAAGAAC ATTCAGATTTAGAAAGAAGCTCAAGAAGCGAGGCAAGAAGAAATCTGCTGAAGGCAGTGGGAATGATCCTAATGTTCCCACGGTTCTTCTATAGAGGATGGATTTAGGAAGCTAGTGTGATGCATTGCCCTACCTGACATGAATTTGAAGATGCCACAAGGCTATTTGTGTGAGATTCTCATGGAACTTAAATAAGGCAGTATGCTGACCCAAGATGTGGTGCAGCTCAATCATGATGAACATCAACACATTTCTCGATGACAGTGTCACGATTCCCTGGATTTATCACATTTCATGTAGTAGCATTTGTTTTAGGGAAGCAAATATTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAaaaaa ] consensusID : consensus_12182#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1045 fasta sequence [TTTTTTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAG-TGCAC-GGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCC-GGGACATCAGAATCCAGCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTTGCAGAGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCA-GACGAGAAGGGAGATGTACTTCACGGTGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGCTGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCGACGCCG-AGATGTTGCTGG-AGATGACGCT-CAGTGCC-AGCCCCGTCTCGTCCGGGC-TCGCCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTCTCTCTGGCTCTGCATTATTCTCTCTCTAAGCTCACATAGCCATGATGCTATTATCTTATTTGTGTTCTTGAGAATGTGATCTGATC] [-] EMBL AU086024 [TTTTTTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAGTTGCAC GGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGNAGCTTGCCGGGGACATCAGAATCCAGCGTGGTNATTAGGAACCTGGCTTGGACATAGTACCTTGCAGAGTtg ] [-] EMBL AU088681 [ TTTTTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAANACCATCAACACCGAGCAGGNGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAA TAGAG TGCACGGGANCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCC GGGACATCAGAATCCAGCGTGGTTATTAGGAANCTGGCTTGGACATAGTACCTTGCAGAGTGGNTGAAGCAAGTGAAGGAGACGAGGAAGCAGGACGAGAANGGAGATGTACTTCACNGTGGCCGTCGCCTGGGTGCG ] [-] EMBL AK061225 [ TTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAG TGCAC GGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCC GGGACATCAGAATCCAGCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTTGCAGAGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCA GACGAGAAGGGAGATGTACTTCACGGTGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGCTGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCGACGCCG AGATGTTGCTGG AGATGACGCT CAGTGCC AGCCCCGTCTCGTCCGGGC TCGCCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTCTCTCTGGCTCTGCATTATTCTCTCTCTAAGCTCACATAGCCATGATGCTATTATCTTATTTGTGTTCTTGAGAATGTGATCTGATC] [-] EMBL AK099366 [ TTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAACCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGACCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCAGAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAATTGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTGGCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAG TGCAC GGAGCCCCATTGACCAGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCC GGGACATCAGAATCCAGCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTTGCAGAGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCA GACGAGAAGGGAGATGTACTTCACGGTGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGCTGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCGACGCCG AGATGTTGCTGG AGATGACGCT CAGTGCC AGCCCCGTCTCGTCCGGGC TCGCCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTCTCTCTGGCTCTGCATTATTCTCTCTCTAAGCTCACATAGCCATGATGCTATTATCTTATTTGTGTTCTTGAGAATGTGATCTGAT ] [-] EMBL OSS12596A [ TCGTCGACNCCGAAGATGTTGCTGGAAGATGACGCT CAGTGCC AGCCCCGTCTCGTCCGGGCTTCGCCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTCTNTCTGGCTCTGCATTATTCTCTCTCTAAGCTCACATAGCCATGATGCTATTATCTTAT ] [-] EMBL OSS12271A [ ttcCGTCGACGCCN AGATGTTGCTGGAAGATGACGCTAAAGTGCCAAGCCCCGTCTCGTCCGGGC TCGCCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGACGGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTCTCTCTGGCTCTGCATTATTCTCTCTCTAAGCTCACATAGCCATGATGC ] [-] EMBL OSS11388A [ TGTTGTGGTTCTCGTAGCCGATGACGGTGTCGACGGGGCGTCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGNCGAANATGATCACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCACCATCTTCTCTTGCCCTCCTCCGGTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATTATCAATCACCTACCTCTCTCTGTC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12182#0 AGCAGAAAACCCCAAATCCCGCGGTTCCCCCGCGCCGCAAAAATCATCCATGGCTTCTCC 60 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 GCCGCCACCGGCGGCCGCCGCCGCCGCGAGCCCGAAGCGGAAACCCAAGCCCAAGCCGAA 120 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 GGCAGCCGGCGCCTCCACCCTAAACCCTAACTGGGCGCAGCTCCAGTCCAAGCTCCCCCG 180 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 CCCCGTCGCCGCCACCACCCTCGGCAAGCGCAAGCACCGCCCCGACCACCCTTCTCCGGC 240 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 CCCCGCGCCCACCGAGCCCGCCGCGGAGGAGGAGGCGGCGGAGGTCAAGCTCGTGCCCAC 300 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 CTCCGACGACACCAGCTTGACGAAGGCGGTCGCTGTGGATTGCGAGATGGTCGGGGTCGG 360 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 CGCAGGCGGCAGCAAGAGCGCCCTCGGCAGAGTCACCTTGGTTAACTCTTGGGGTAACGT 420 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 TGTATATGATGAATATACAAGACCGGTAGAGCGGATTGTTGACTACCGTACCCATATTAG 480 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 TGGGATTAGACCGAAGCACATGAATAAAGCCAAAGATTTCTGGGTTGTTCAGAAAGATGT 540 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 AGCTGAGCTGATCAAAGGAAGAATTCTTGTTGGGCATGCCTTGCACCATGATCTTAAGGT 600 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 TTTGCTACTAGGCCACCCAAAGAAGGACATAAGGGATACCTCAGAATATGAGGTTTTTCG 660 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 AAGGGAAGGGAAGAGGAGATCACTGAAAGATCTTACTGCTCAAGTACTTGGTGCTAAAAT 720 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 ACAACAGAAAGAGCATTGCCCAATTGAGGATGCTCGTGCAGCAATGTTCATTTACAACAA 780 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 GCATAAGAAAGTATGGGAGAAGAATATGAAAGAACAATTCAGATTTAGAAAGAAGCTCAA 840 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 GAAGCGAGGCAAGAAGAAATCTGCTGAAGGCAGTGGGAATGATCCTAATGTTCCCACGGT 900 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 TCTTCTATAGAGGATGGATTTAGGAAGCTAGTGTGATGCATTGCCCTACCTGACATGAAT 960 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 TTGAAGATGCCAAAGGCTATTTGTGTGAGATTCTCATGGAACTTAAATGAGGCAGTATGC 1020 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 TGACCCAAGATGTGGTGCAGCTCAATCATGATGAACATCAACACATTTCTCGATGACAGT 1080 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 GTCACGATTCCATGGATTTATCACATTTCATGTAGTAGCATTTGTTTTAGGGAAGCAATA 1140 consensus_12182#1 --------------------------------------------------------TTTT 4 * consensus_12182#0 TTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAA 1200 consensus_12182#1 TTTCTGATGAAAATTTTGTACCTGAATCTCATATTCTCATGTAATGTTACTCCATACAAA 64 ************************************************************ consensus_12182#0 CCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGA 1260 consensus_12182#1 CCTCCAAGCTTTGCAGCAAACATATCTATTAATTTATTGAAAAAGTTACAGGAGACAAGA 124 ************************************************************ consensus_12182#0 CCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCA 1320 consensus_12182#1 CCGGGTTACTGAGAATCGGATTCTGAGGGCTGGGGTGCCTTGTAACCACTGTAGATGCCA 184 ************************************************************ consensus_12182#0 GAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAAT 1380 consensus_12182#1 GAGCTCTCTGATCATGCCGTTTTCTAATTGTGAACTGATGGTTGTGCAATGGCAGGGAAT 244 ************************************************************ consensus_12182#0 TGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTG 1440 consensus_12182#1 TGCTGTCCAGCAGGTGCAGGATGAACACCATCAACACCGAGCAGGTGAACATTGGTATTG 304 ************************************************************ consensus_12182#0 GCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAGTGCACGGAGCCCCATTGACC 1500 consensus_12182#1 GCCCGAAGATCCACATCAGCAGCGTTGTCGCGAAGTAGAGTGCACGGAGCCCCATTGACC 364 ************************************************************ consensus_12182#0 AGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCCGGGACATCAGAATCCA 1560 consensus_12182#1 AGAAGTTGCCTCCTCGGATCACAGCATGCTGGATGTAGCTTGCCGGGACATCAGAATCCA 424 ************************************************************ consensus_12182#0 GCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCTGCATCTCCAGAGGAAACAGGTCT 1620 consensus_12182#1 GCGTGGTTATTAGGAAGCTGGCTTGGACATAGTACCT----------------------- 461 ************************************* consensus_12182#0 GAAAATTTCTGATTTTGATGCCATGTTATGTTACCTCAGCAGGGTTGGAATACCGGTAGT 1680 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 ATCTCCAGAATTAGTGGCTCCAAAAATTCAACTTTAAAGATTCAAATGCAAAAGGTATTT 1740 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 ACAGAGGCTGGTTTCAGAGGTGAGCAGCAGCTGAAGCCTGAAGGGAAGCTAACCTTGCAG 1800 consensus_12182#1 -------------------------------------------------------TGCAG 466 ***** consensus_12182#0 AGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCAGACGAGAAGGGAGATGTACTTCACGG 1860 consensus_12182#1 AGTGGATGAAGCAAGTGAAGGAGACGAGGAAGCAGACGAGAAGGGAGATGTACTTCACGG 526 ************************************************************ consensus_12182#0 TGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGC 1920 consensus_12182#1 TGGCCGTCGCCTGGGTGCGGTCGCCGTAGACGAGCTCCGTCATGAAAACCTTGGAGGTGC 586 ************************************************************ consensus_12182#0 TGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCG 1980 consensus_12182#1 TGCTCACCCAGGCCCCGATGAGCGAGCCCAGCGCGATGCACAGCGACGCCAGGTTCGTCG 646 ************************************************************ consensus_12182#0 ACGCCGAGATGTTGCTGGAGATGACGCTCAGTGCCAGCCCCGTCTCGTCCGGGCTCGCCT 2040 consensus_12182#1 ACGCCGAGATGTTGCTGGAGATGACGCTCAGTGCCAGCCCCGTCTCGTCCGGGCTCGCCT 706 ************************************************************ consensus_12182#0 GCAACGACAGCAACACGGTAAATCACCAACCTCCCATCACCACGGCCACACTTGGATTCA 2100 consensus_12182#1 GCA--------------------------------------------------------- 709 *** consensus_12182#0 GCTGTTCAGTTGTCACAGAAAATTCAGTTGCTCCATGTCGCCGGCGGCCGGCGGTGGGTG 2160 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 GTTTACCTGCACCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGAC 2220 consensus_12182#1 -----------CCATGCGGCGGACCCATGCCAGCTTGTTGTGGTTCTCGTAGCCGATGAC 758 ************************************************* consensus_12182#0 GGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGAT 2280 consensus_12182#1 GGTGGCGGCGGGGCGGCGGAGAATCCGGTAGAGGAGGATGAGGTGGTAGCCGAACATGAT 818 ************************************************************ consensus_12182#0 CACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCAC 2340 consensus_12182#1 CACCAGACCACATGGCACAAGCACCAGGTCCAGGGAGCTCTTCTGCATCATCATCACCAC 878 ************************************************************ consensus_12182#0 CATCTTCTCTTGCCCTCCTCCGAGTGGTGGAGCTGGGTTGCTTATGGATTAATGGATAGG 2400 consensus_12182#1 CATCTTCTCTTGCCCTCCTCCG---GTTAGACCTGTGTTCTTCTTCCCTTCTTTCTTATT 935 ********************** * * ** *** *** * * ** * ** consensus_12182#0 ATCAGT-ACGTGGTACCAACGGTACATTCTGGCTTGGCTTGTCGCTTGGGATCAAAGACT 2459 consensus_12182#1 ATCAATCACCTACCTCTCTCTGT-CTCTCTGGCTCTGC--ATTATTCTCTCTCTAAG--C 990 **** * ** * * * ** * ******* ** * * ** *** consensus_12182#0 TGGGAGGAGGGTCAGGCAAGCAAAATTCATGGAGCTTGCTTCCAAGAAATCCAGGCAATT 2519 consensus_12182#1 TCACATAGCCATGATGCTATTATCTTATTTG-----TGTTCTTGAGAATGTGATCTGATC 1045 * * * * ** * * * ** ** * **** * ** consensus_12182#0 GTTGCTTCCCGGGTTACTGTATCTCCTAACCTTCCAAGATCCGAAACCCAACTTGCATAA 2579 consensus_12182#1 ------------------------------------------------------------ consensus_12182#0 AGCTACATGTCAAAATCAATAATTTATGATTTAAATATAATATAAATAAATTTCTATGG 2638 consensus_12182#1 ----------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||