cluster # 1220

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Oryza sativa
cluster # 1220 cluster # 1220 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1220#0 length = 623 sequences # 2

consensusID : consensus_1220#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 623
fasta sequence

                              [GTNCAATTCGGCTACACAAACATTTGACGGAGTTGACCNGATGGGTGAAAGGTTGGCAAATGAGGTTTTATCAGTTGTAGAACAAAGAAGAGGTGTGAAGAAGATCTCATTTGTGGCACACNCTCTAGGTGGCCTTGTTGCTAGATATGCTATAGGGAGGCTTTATGAACCAAATAACAAAACTAAATCTTCTTCGGAGAAGAGCAGAGATGAAGGTGAGCGCTTGGAGGGTTTCATNGCTGGCTTAGAACCTATGAATTTTATAACCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAATAAACAGATTCTTCCACCAGCTCCCTTTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAGCTTCGGAAACGGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATGCCTTACAGACAATGATGATGGCAGACGCCCACTCCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGATCATATGGGTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATAT]

[+] EMBL AU075810             [GTNCAATTCGGCTACACAAACATTTGACGGAGTTGACCNGATGGGTGAAAGGTTGGCAAATGAGGTTTTATCAGTTGTAGAACAAAGAAGAGGTGTGAAGAAGATCTCATTTGTGGCACACNCTCTAGGTGGCCTTGTTGCTAGATATGCTATAGGGAGGCTTTATGAACCAAATAACAAAACTAAATCTTCTTCGGAGAAGAGCAGAGATGAAGGTGAGCGCTTGGAGGGTTTCATNGCTGGCTTAGAACCTATGAATTTTATAACCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAATAAACAGATTCTTCCACCAGCTCCCTTTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAGCTTCGGAAACGGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATGCCTTAC                                                                                                                                                                                                                ]
[+] EMBL BE230123             [                                                AAGGTTGGCAAATGAGGTTTTATCAGTTGTAGAACAAAGAAGAGGTGTGAAGAAGATCTCATTTGTGGCACACTCTCTAGGTGGCCTTGTTGCTAGATATGCTATAGGGAGGCTTTATGAACCAAATAACAAAACTAAATCTTCTTCGGAGAAGAGCAGAGATGAAGGTGAGCGCTTGGAGGGTTTCATTGCTGGCTTAGAACCTATGAATTTTATAACCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAACAAACAGATTCTTCCACCAGCTCCCTTTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAGCTTCGGAAACTGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATTCCTTACAGACAATGATGATGGCAGACGCCCACTCCTCCTTCAAATGGTTGATGACTGTGATGATATAAAATTCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGATCATATGGGTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGACTTCTTGTTCGTGATGAGAAATAT]




>consensus_1220#0
GTNCAATTCGGCTACACAAACATTTGACGGAGTTGACCNGATGGGTGAAAGGTTGGCAAA
TGAGGTTTTATCAGTTGTAGAACAAAGAAGAGGTGTGAAGAAGATCTCATTTGTGGCACA
CNCTCTAGGTGGCCTTGTTGCTAGATATGCTATAGGGAGGCTTTATGAACCAAATAACAA
AACTAAATCTTCTTCGGAGAAGAGCAGAGATGAAGGTGAGCGCTTGGAGGGTTTCATNGC
TGGCTTAGAACCTATGAATTTTATAACCTTTGCCTCACCGCATCTTGGTTCAAGTGGAAA
TAAACAGATTCTTCCACCAGCTCCCTTTCTTATGTGGCCTGCCTTTCCTGGAAAGAAGAG
CTTCGGAAACGGCACATTTGCTTGTTGGGAGAACAGGAAAGCATTTATGCCTTACAGACA
ATGATGATGGCAGACGCCCACTCCTCCTTCAAATGGTTGATGACTGTGATGATATAAAAT
TCAGATCAGCGTTGCGCTCTTTCAAACGACGTGTGGCATATGCTAATGCAAACTTCGATC
ATATGGGTGGGTGGAGAACGTCATCAATCCGTCGCCAACATGAGCTACCAAAACATCGAC
TTCTTGTTCGTGATGAGAAATAT

clustalw multiple alignements is not computed in this case