These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12305#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2749 fasta sequence [TGTGGCCGCCGAATCGACACCAAACCCCCCAAACATCTCGCAACACATCGAATTATCGAACCNTCCAATCCTACCCCGACCACGAGCGAATCCTCCTCATCGAAGTGGAGGAGAAGGAGATCCTCGCCGGAGCATCCGGTGGCTTGGTTCGTGGGGGATCGGCCTGCGGCCGGC-GAACCCTAGGCCGATGAGGCCGA-TCCGGCTGCCGGAGCCCCCCGGCGTCGGCGGCATGGAGACGCCCGAGATCTTCACCGGCGCCGCCGCCGCCACCGTCGTCGTCCGCCGCGCCGTCGTCATC-GGCAACG-GCTCCCCCGGCGCCGAGAACCAGTGCCTCGGCCTCGTCCGCGCCCTCGGCCTCGCCGACCACCTGACCCTCTACCGTGTGACGAGGCCGCAGGGAGGGATCAACGAGTGGCTGCACTTCCTCCCCGTCTCGCTCCACAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGCTCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCATATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACAGCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTATGCTTTAATTGCTGGCGGACAAGAAGAAATTCCACGCCTGTTCCGTAGATGGATAACTCCGCAAGAACCACCTGGGAGGAATGTGGTGCTTACTGTTGGTGCACTACACCAAGCTGATTCTGCTGCACTGCGCCTTGCTGCTATAGCCTGGCATGATGAACTCGCCCCTTTGCCTAAGCCATTGCTAATCGTCAACATTGGAGGACCCACAAGTAGATCTCCCTATCTTTCTCACGTTGCACATTCCATTGTTTCTGTATTTGGATACGTAGTCCTGCTTTGAGTTTGCAAGAATAAATCTAGCCACAATTCAAATGGTTGCACTCTGATGATTTCTCATGGAGAAACCTATGCGCACCTGAGTGCACACACAAAAAATAAGAAATGATATGTCGATGTGTTACTGTTAGATGTGGCTAGTCAGTTGCATAGAAGATACACCTGTTATTTCTTTCAGTAACAGGAGATTCATCATTTTTAGGATATCTCAATTGATTTCTTTACTCAATATGATGATCTCTAAGGGGATATCATCTCTTATTTATCGTAGCAAGGAAAAGTTCCTTGCAACGCCATTGTCCCTGGAACATTATGAAATTGTTTTAACTAATGTGATGCATCATAAAGATACCATAGAAGCTAGAATCATCAAGAGTAAAAGGCCGACCTTTTTTATGTCCTGAAGTTGCATTCTTTGCCCCTCCCCCTAGATCTTTGGGGGTGCAGAACTAGTGATGTGCCATTACTCCATGCTACCTGTGGACTGTGGATTGAGAACCCCACATTTGATGTTGTTGTTTAGATATCTGTATTAGCCTTCAGCTTTCCTCCTAAAACCCATGAGAGCCTATGATACAAATCAACTCAGGGTCAGAATTTCGTATATAGTATGTGAGGACTATAAACATATAGCGAATCTTATAATGAGCAAAGCATTTCGATGCTATGATCTTTTATATCCTTCTCTGTACACCTTTCAGAAGTATTATCGACTAGTCAACTGCCTTGGGACTCTTGGATATGCTTTTGCATGTCTAACTTACAGAGAGCTAACAGAATTTCTGTTGGCTTTTAATCCTTTTTATCTTAAGCTTATTTTGTTACAGTTTTGTATGTGTCCCATTATTGATTTTCATGCCCAGATCCAATATTGACTTTTGTTATTTGTCAATGATTAGGGAATTGTAAGTATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCATCCTAAGATCTATATTTGGGATGGGGAAGAACCTAACCCGCACATGGGGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTGAGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGTTTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTTTGGTTTGAGATTCTCTTCCCTC---TTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGAAACTTTATTCTGTGTGATACATGAGAAGCAATCTGACATTG] [+] EMBL AU030689 [TGTGGCCGCCGAATCGACACCAAACCCCCCAAACATCTCGCAACACATCGAATTATCGAACCNTCCAATCCTACCCCGACCACGAGCGAATCCNCCTCATCGAAGTGGAGGAGAAGGAGATCCTCGCCGGAGCATCCGGTGGCTTGGTTCGTGGGGGATCGGCCTGCGG NGNCNGAACCCTAGGCCGATGAGG CGANTCCGGCTGCCGGAGCCCCCCGGCGTCGGCGGCATGGAGACGCCCGAGATCTTCACCGGCGCCG CGCNGCCACCGTCGTCGTCCGCNGCGCCGTCGTCATCGGGCAACGNGTTCCCCCGGCGCCGAGAACNAGTGCCTC ] [+] EMBL AK073473 [ tTCCAATCCTACCCCGACCACGAGCGAATCCTCCTCATCGAAGTGGAGGAGAAGGAGATCCTCGCCGGAGCATCCGGTGGCTTGGTTCGTGGGGGATCGGCCTGCGGCCGGC GAACCCTAGGCCGATGAGGCCGA TCCGGCTGCCGGAGCCCCCCGGCGTCGGCGGCATGGAGACGCCCGAGATCTTCACCGGCGCCGCCGCCGCCACCGTCGTCGTCCGCCGCGCCGTCGTCATC GGCAACG GCTCCCCCGGCGCCGAGAACCAGTGCCTCGGCCTCGTCCGCGCCCTCGGCCTCGCCGACCACCTGACCCTCTACCGTGTGACGAGGCCGCAGGGAGGGATCAACGAGTGGCTGCACTTCCTCCCCGTCTCGCTCCACAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGCTCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCATATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACAGCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTATGCTTTAATTGCTGGCGGACAAGAAGAAATTCCACGCCTGTTCCGTAGATGGATAACTCCGCAAGAACCACCTGGGAGGAATGTGGTGCTTACTGTTGGTGCACTACACCAAGCTGATTCTGCTGCACTGCGCCTTGCTGCTATAGCCTGGCATGATGAACTCGCCCCTTTGCCTAAGCCATTGCTAATCGTCAACATTGGAGGACCCACAAGTAGATCTCCCTATCTTTCTCACGTTGCACATTCCATTGTTTCTGTATTTGGATACGTAGTCCTGCTTTGAGTTTGCAAGAATAAATCTAGCCACAATTCAAATGGTTGCACTCTGATGATTTCTCATGGAGAAACCTATGCGCACCTGAGTGCACACACAAAAAATAAGAAATGATATGTCGATGTGTTACTGTTAGATGTGGCTAGTCAGTTGCATAGAAGATACACCTGTTATTTCTTTCAGTAACAGGAGATTCATCATTTTTAGGATATCTCAATTGATTTCTTTACTCAATATGATGATCTCTAAGGGGATATCATCTCTTATTTATCGTAGCAAGGAAAAGTTCCTTGCAACGCCATTGTCCCTGGAACATTATGAAATTGTTTTAACTAATGTGATGCATCATAAAGATACCATAGAAGCTAGAATCATCAAGAGTAAAAGGCCGACCTTTTTTATGTCCTGAAGTTGCATTCTTTGCCCCTCCCCCTAGATCTTTGGGGGTGCAGAACTAGTGATGTGCCATTACTCCATGCTACCTGTGGACTGTGGATTGAGAACCCCACATTTGATGTTGTTGTTTAGATATCTGTATTAGCCTTCAGCTTTCCTCCTAAAACCCATGAGAGCCTATGATACAAATCAACTCAGGGTCAGAATTTCGTATATAGTATGTGAGGACTATAAACATATAGCGAATCTTATAATGAGCAAAGCATTTCGATGCTATGATCTTTTATATCCTTCTCTGTACACCTTTCAGAAGTATTATCGACTAGTCAACTGCCTTGGGACTCTTGGATATGCTTTTGCATGTCTAACTTACAGAGAGCTAACAGAATTTCTGTTGGCTTTTAATCCTTTTTATCTTAAGCTTATTTTGTTACAGTTTTGTATGTGTCCCATTATTGATTTTCATGCCCAGATCCAATATTGACTTTTGTTATTTGTCAATGATTAGGGAATTGTAAGTATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCATCCTAAGATCTATATTTGGGATGGGGAAGAACCTAACCCGCACATGGGGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTGAGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGTTTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTTTGGTTTGAGATTCTCTTCCCTC TTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGAAACTTTATTCTGTGTGATACATGAGAAGCAATC ] [+] EMBL CB673307 [ GCGAATCCTCCTCATCGAAGTGGAGGAGAAGGAGATCCTCGCCGGAGCATCCGGTGGCTTGGTTCGTGGGGGATCGGCCTGCGGCCGGC GAACCCTAGGCCGATGAGGCCGA TCCGGCTGCCGGAGCCCCCCGGCGTCGGCGGCATGGAGACGCCCGAGATCTTCACCGGCGCCGCCGCCGCCACCGTCGTCGTCCGCCGCGCCGTCGTCATC GGCAACG GCTCCCCCGGCGCCGAGAACCAGTGCCTCGGCCTCGTCCGCGCCCTCGGCCTCGCCGACCACCTGACCCTCTACCGTGTGACGAGGCCGCAGGGAGGGATCAACGAGTGGCTGCACTTCCTCCCCGTCTCGCTCCACAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGCTCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCATATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACAGCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTATGCTTTAATTGCTGGCGGACAAGAAGAAATCCCACGCCTGTTCCGTAGATGGATAACTCCGCA ] [+] EMBL CF323382 [ AATCATCAAGAGTAAAAGGCCGACCTTTTTTATGTCCTGAAGTT ] [-] EMBL CB656278 [ TATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCATCCTAAGATCTATATTTGGGATGGGGAAGAACCTAACCCGCACATGGGGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTGAGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGTTTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTTTGGTTTGAGATTCTCTTCCCTC TTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGAAACTTAGGTCTGTGTGATACATGAGAAGCAATCTGACATTG] [+] EMBL BI809713 [ AAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCGATT CAGAACGAGGGTGGTCTGTGGGATGATAGTGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCC ATTTTGGAGCCATTGCACAGCACCCAGGAGATCCTTTTTGGTTTGAGATTCTCTTCCCTCCTTTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGAAACTTTAaaaaaaaaa ] [+] EMBL BQ909103 [ ccgAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCGATTGCAGAACGAGGGTGGTCTGTGGGATGATAGTGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACCAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCCTTTTTGGTTTGAGATTCTCTTCCCTCCTTTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGAAACTTTATTCTGTGTGATACATGAGAAaaaaaaaa ] consensusID : consensus_12305#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1342 fasta sequence [CTCGCCCCTTAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGCTCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCATATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACAGCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTATGCTTTAATTGCTGGCGGACAAGAAGAAATTCCACGCCTGTTCCGTAGATGGATAACTCCGCAAGAACCACCTGGGAGGAATGTGGTGCTTACTGTTGGTGCACTACACCAAGCTGATTCTGCTGCACTGCGCCTTGCTGCTATAGCCTGGCATGATGAACTCGCCCCTTTGCCTAAGCCATTGCTAATCGTCAACATTGGAGGACCCACAAGGAATTGTAAGTATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCAT-CCTAAGATCTATA-TTTGGGATGGGGAAGAACCTAACCCGCACAT-GGGGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTGAGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGTTTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTTTGGTTTGAGATTCTCTTCCCTCTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAATTGANACTTTATTCTGTGTGAAAAAAAAAAAAAAAA] [+] EMBL CB656277 [CTCGCCCCTTAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGCTCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCATATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACAGCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTATGCTTTAATTGCTGGCGGACAAGAAGAAATTCCACGCCTGTTCCGTAGATGGATAACTCCGCAAGAACCACCTGGGAGGAATGTGGTGCTTACTGTTGGTGCACTACACCAAGCTGATTCTGCTGCACTGCGCCTTGCTGCTATAGCCTGGCATGATGAACTCGCCCCTTTGCCTAAGCCATTGCTAATCGTCAACATTGGAGGACCCACAAGGAATTGTAAGTATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCAT CCTAAGATCTATA TTTGGGATGGGGAAGAACCTAACCCGCACAT GGGGCATCTTGCATGGGCTGATGCTTTTGTTGTAAC ] [-] EMBL CB673308 [ AGGACCCACAAGGAATTGTAAGTATGGTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGAGTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAGAGTTCGCTGGTCAT CCTAAGATCTATA TTTGGGATGGGGAAGAACCTAACCCGCACAT GGGGCATCTTGCATGGGCTGATGCTTTTGTCGTAACAGCTGATTCTATAAGTATGTTAAGTGAGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGTTTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACACGTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTTTGGTTTGAGATTCTCTTCCCTCTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATGAAGTATTGGAAT ] [+] EMBL AU030690 [ GAAAGGTCTCTGNTATTATATCNAAAGCGTTCGCTGGTCATCCCTAAGATCTATATTTTGGNNTGGGGAAGAACCTAACCCGCACATGGGGGCNTCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAANTATGTTAAGTGAGGCTTGTNGCACAGGGAAGCCTGTTTACGTCATTGGGNCTGNGTNTTGTAAATGGANGTTTTCTGCTTTTCACAAGNCTCTACGGGAGCGAGGNGTTGTCCGTCCTTTCACTGGATTGGAAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGANGTAGCTACACGTGTCCGTGAAGCNATTGCNGAACGNGGGTGGTCTGTGGGATGATAGCGACAGTTAGGATGTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAGTTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCTTTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCNGGNGATCATTTTTGGTTTGAGATTCTCTTCCCTCTTGTNCTTCTAACGCTNCTGGNGAGAAGCCAACATATGANGTATTGGNATTGANACTTTATTCTGTGTGAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12305#0 TGTGGCCGCCGAATCGACACCAAACCCCCCAAACATCTCGCAACACATCGAATTATCGAA 60 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 CCNTCCAATCCTACCCCGACCACGAGCGAATCCTCCTCATCGAAGTGGAGGAGAAGGAGA 120 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 TCCTCGCCGGAGCATCCGGTGGCTTGGTTCGTGGGGGATCGGCCTGCGGCCGGCGAACCC 180 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 TAGGCCGATGAGGCCGATCCGGCTGCCGGAGCCCCCCGGCGTCGGCGGCATGGAGACGCC 240 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 CGAGATCTTCACCGGCGCCGCCGCCGCCACCGTCGTCGTCCGCCGCGCCGTCGTCATCGG 300 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 CAACGGCTCCCCCGGCGCCGAGAACCAGTGCCTCGGCCTCGTCCGCGCCCTCGGCCTCGC 360 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 CGACCACCTGACCCTCTACCGTGTGACGAGGCCGCAGGGAGGGATCAACGAGTGGCTGCA 420 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 CTTCCTCCCCGTCTCGCTCCACAAGCTAATCGACCAAGTGCTGAGGCAGTTCTTCCGCAA 480 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 CACGAGGCTTGCGCCGGTGGTCGAGGGGCGGAAGCACTACCGCGTCCCGAACGGCGGATC 540 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 GGTTGGGGTTGGGCTGTCCTCTGTCCTGGAAGCGGACGCCAAGAAGATCGTGGCTGTGGC 600 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 TCGCGATACATTCGAGAAGGAAGGGCCAACTTTAATTGTCGCGTGTGGCTGGGATACCAT 660 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 ATCATATTCAAGCTCAATAAGGCATCTAGCTTCAGGCAATGTGTTCGTCATTCAGATACA 720 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 GCACCCGAGGTCTCGCCTAGATAGGTTTGATCTGGTGGTGACTCCTCGCCATGATTACTA 780 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 TGCTTTAATTGCTGGCGGACAAGAAGAAATTCCACGCCTGTTCCGTAGATGGATAACTCC 840 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 GCAAGAACCACCTGGGAGGAATGTGGTGCTTACTGTTGGTGCACTACACCAAGCTGATTC 900 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 TGCTGCACTGCGCCTTGCTGCTATAGCCTGGCATGATGAACTCGCCCCTTTGCCTAAGCC 960 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 ATTGCTAATCGTCAACATTGGAGGACCCACAAGTAGATCTCCCTATCTTTCTCACGTTGC 1020 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 ACATTCCATTGTTTCTGTATTTGGATACGTAGTCCTGCTTTGAGTTTGCAAGAATAAATC 1080 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 TAGCCACAATTCAAATGGTTGCACTCTGATGATTTCTCATGGAGAAACCTATGCGCACCT 1140 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 GAGTGCACACACAAAAAATAAGAAATGATATGTCGATGTGTTACTGTTAGATGTGGCTAG 1200 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 TCAGTTGCATAGAAGATACACCTGTTATTTCTTTCAGTAACAGGAGATTCATCATTTTTA 1260 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 GGATATCTCAATTGATTTCTTTACTCAATATGATGATCTCTAAGGGGATATCATCTCTTA 1320 consensus_12305#1 ------------------------------------------------------------ consensus_12305#0 TTTATCGTAGCAAGGAAAAGTTCCTTGCAACGCCATTGTCCCTGGAAC--ATTATGAAAT 1378 consensus_12305#1 ----------------------------------CTCGCCCCTTAAGCTAATCGACCAAG 26 * * **** * * ** ** consensus_12305#0 TGTTTTAACTAATGTGATGCATCATAAAGATACCATAGAAGCTAGAATCATCAAGAGTAA 1438 consensus_12305#1 TGCTGAGGCAGTTCTTCCGCAACACGAGGCTTGCGCCGGTGGTCGAGGGG-CGGAAGCAC 85 ** * * * * *** ** * * * * * * * ** * ** * consensus_12305#0 AAGGCCGACCTTTTTTATGTCCTGAAGTTGCATTCTTTGCCCCTCCCCCTAGATCTTTGG 1498 consensus_12305#1 TACCGCGTCCCGAACGGCGGATCGGTTGGGGTTGGGCTGTCCTCTGTCCTGGAA----GC 141 * ** ** * * * * ** ** *** ** * consensus_12305#0 GGGTGCAGAACTAGTGATGTGCCATTACTCCATGCTACCTGTGGACTGTGGATTGAGAAC 1558 consensus_12305#1 GGACGCCAAGAAGATCGTG-GCTGTGGCTC-GCGATAC------ATTCGAGAAGGAAGGG 193 ** ** * * ** ** * *** * *** * * ** ** consensus_12305#0 CCCACATTTGATGTTGTTGTTTAGATATCTGTATTAGCCTTCAGCTTTCCTCCTAAAACC 1618 consensus_12305#1 CCAACTTTAATTGTCGC-GTGTGG----CTGGGATACCATA------TCATATTCAAGCT 242 ** ** ** *** * ** * * *** ** * * ** * * ** * consensus_12305#0 CATGAGAGCCTATGATACAAATCAACTCAGGGTCAGAATTTCGTATATAGTATGTGAGGA 1678 consensus_12305#1 CAATAAGGCATCTAGCTTCAGGCAAT---GTGTTCGTCATTCAGATACAGCACCCGAGGT 299 ** * ** * * * *** * ** * *** *** ** * **** consensus_12305#0 CT-ATAAACATATAGCGAATCTTATAATGAGCAAAGCATTTCGATGCTATGATCTTTTAT 1737 consensus_12305#1 CTCGCCTAGATAGGTTTGATCTGGTGGTGA---------CTCCTCGCCATGAT-TACTAT 349 ** * *** **** * *** ** ** ***** * *** consensus_12305#0 ATCCTTCTCTGTACACCTTTCAGAAGTATTATCGACTAGTCAACTGCCTTGGGACTCTTG 1797 consensus_12305#1 G-CTTTAATTGCTGGCGGACAAGAAGAAATTCCA------CGCCTGTTCCGTAGAT---G 399 * ** ** * ***** * * * * *** * * * consensus_12305#0 GATATGCTTTTGCATGTCTAACTTACAGAGAGCTAACAGAATTTCTGTTGGCTT-TTAAT 1856 consensus_12305#1 GATA--ACTCCGCAAGAACCACCTG-GGAGGAATGTGGTGCTTACTGTTGGTGCACTACA 456 **** * *** * ** * *** * ** ******* ** consensus_12305#0 CCTTTTTATCTTAAGCTTATTTTGTTACAGTTTTGTATGTGTCCCATTATTGATTT---T 1913 consensus_12305#1 CCAAGCTGATTCTGCTGCACTGCGCCTTGCTGCTATA-GCCTGGCATGATGAACTCGCCC 515 ** * * * * * * * ** * * *** ** * * consensus_12305#0 CATGCCCAGATCCAATATTGACTTTTGTTATTTGTCAATGATTAGGGAATTGTAAGTATG 1973 consensus_12305#1 CTTTGCCTAAGCCATTGCTAATCGTCAACATTGGAGGACCCACAAGGAATTGTAAGTATG 575 * * ** * *** * * * * *** * * * *************** consensus_12305#0 GTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGA 2033 consensus_12305#1 GTGTCGACCTTGCCAGGCAGCTCATAGCTTCTACGTATAATGTTCTAGACAGCTGTGGGA 635 ************************************************************ consensus_12305#0 GTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAG 2093 consensus_12305#1 GTGTGAGAGTTTCATTTTCCAGGAGAACACCGCGAAAGGTCTCTGATATTATATCGAAAG 695 ************************************************************ consensus_12305#0 AGTTCGCTGGTCATCCTAAGATCTATATTTGGGATGGGGAAGAACCTAACCCGCACATGG 2153 consensus_12305#1 AGTTCGCTGGTCATCCTAAGATCTATATTTGGGATGGGGAAGAACCTAACCCGCACATGG 755 ************************************************************ consensus_12305#0 GGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTG 2213 consensus_12305#1 GGCATCTTGCATGGGCTGATGCTTTTGTTGTAACAGCTGATTCTATAAGTATGTTAAGTG 815 ************************************************************ consensus_12305#0 AGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGT 2273 consensus_12305#1 AGGCTTGTAGCACAGGGAAGCCTGTTTACGTCATTGGGACTGAGTATTGTAAATGGAAGT 875 ************************************************************ consensus_12305#0 TTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGG 2333 consensus_12305#1 TTTCTGCTTTTCACAAGACTCTACGGGAGCGAGGAGTTGTCCGTCCTTTCACTGGATTGG 935 ************************************************************ consensus_12305#0 AAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACAC 2393 consensus_12305#1 AAGATATTTCAAATAGCTGGAGCTACCCTCCCCTAAACGATGCTATTGAAGTAGCTACAC 995 ************************************************************ consensus_12305#0 GTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGAT 2453 consensus_12305#1 GTGTCCGTGAAGCAATTGCAGAACGAGGGTGGTCTGTGGGATGATAGCGACAGTTAGGAT 1055 ************************************************************ consensus_12305#0 GTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAG 2513 consensus_12305#1 GTGTTGTTCTGTCCGACAGTAAATTATGTAGTTTGATTAACACAGTCACTTAAATTCAAG 1115 ************************************************************ consensus_12305#0 TTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCT 2573 consensus_12305#1 TTACATTGTTCAGAGGAAGAATAATATAGCCATGGAATGGCCTGTACAAAAGTTGAGCCT 1175 ************************************************************ consensus_12305#0 TTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTT 2633 consensus_12305#1 TTTCTTTTGGTGGTATACCCCAATTTTGGAGCCATTGCACAGCACCCAGGAGATCATTTT 1235 ************************************************************ consensus_12305#0 TGGTTTGAGATTCTCTTCCCTCTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATG 2693 consensus_12305#1 TGGTTTGAGATTCTCTTCCCTCTTGTACTTCTAACGCTACTGGAGAGAAGCCAACATATG 1295 ************************************************************ consensus_12305#0 AAGTATTGGAATTGAAACTTTATTCTGTGTGATACATGAGAAGCAATCTGACATTG 2749 consensus_12305#1 AAGTATTGGAATTGANACTTTATTCTGTGTGAAAAAAAAAAAAAAAA--------- 1342 *************** **************** * * * ** ** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||