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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12363#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3100 fasta sequence
[CCTTCTCTCCCCCGATCCAATCTCCCGGCGAGCGAGCGAGTGGAATCGGCGGCGATCATGGCGGCGACGGCGTTCCGGCGAGGTGGAGCACGCGTGCGACGACAAGCGCCGAGCGGCTTCCATTTGCCGTGGCTGGGGGCGCAGCCGAGAAGGGCGCCAAGCCGTGCCATGGCGTTGGCGGTCCGGCGAGGCGGCGGAGCCCGAAGGTAGCTGCCAAGCCGGCGCTTATCGTCCCCGGCGAGGGACGGTGAGGAGGGGACTCCAAGGCGGCGCGCGCATGGACGTCAACCAGCGCGACCGTGATGGAGAGGCGGCGAGGGCACGCCGAGGCACACGTGGGCGAAGGAGTTGCCCGTGCGGCGACGACGACGATGCCTTCTTCCCGGCGAAGCCCGTACGGCGGCGCTAATGTCGTGCGGCATCTCCGGTGGCTTAGGGCTTCAACGATCCGAAGGTCCTGCATTACTGCAAACGGATCCTCATCAGGGGAAAGCAGTACAATGGAGCGTCGTTGACTGATCACCAACCCCAGCAAACACTAGATGCAGCATACAAATGGCTTAGCTGAGCACAAGAAGTTATAGGCTGATGGTAGAAGCTAGGAAGGAATCTGAAGGAGCTCTGGTTCCTGGCTTGATTGATCTTGCTGCTGCTTCTCCGATCCTCCGGCCTCTGCTATGTTCCTCGACTCCTGCTCCGGTTGCTATCTCACACATCTCTCTCAATTTCTACTGATATATTTTTTCAGTCCTTTATTTCCAGACCACCAAAGAACAAACTAAAGCTCAGATCGATCGGTAGCCATGGATGCCGTGGTGAGTGTCTCACATGGGGCACTGGGGCCGCTACTGGGCAAGCTCAGTACCTTGCTCGCAGACAAGTACGCGTGCTTGAAAGGTGTCCGCCGTGAGATCCATTCCCTAAGATCGGAGCTGAGCAACATGCAAGCGGCGCTCCACAAGTATGCGTCACTCGAGGACCCTGACATCCAGGTGAAGGCCTGGATCACCGAGCTGAGGGAGCTTGCCTATGACATCGAGGACTGCATAGACAAGTTTATGCACCAACTTGGTGCCAACGGTGAGCAGCACCGCACCAGTAATAGCATCGAGGACTTCTTTAGGAAGAGTATACAACGTCTCAAAACTCTTGGCCCGAGGCATAATATTGCTGGCGAGATTGAGGAACTGAAGGCACGAGTTATCTCGGTGAGAGATCAAAAGAACAGCTACAAGCTTGACGATATTTTTTGCAGTAGCTCTAGCAATACCAATGCTTCTGTTGATCCACGGTTGGCTACTCTCTTCGCGGAAGAGAACCATCTTGTCGGTATAGATGGCCCAAGGGTTGAACTTGTCAATTGGTTGGATGCAGAGAGCAGGTTGATAAAGTGTCGCAAGGTATTATCTATTGTGGGGTTTGGAGGTCTTGGGAAGACAACTCTAGCGAATGAGGTATATCGTAGGGTTAAAGTTCATTTTGACTGCCATGCATTTGTGTCAGTGTCACAAAAGCCCGATTTCAAGAATATCTTCAAGGATATAACATACAATATGCCTACGAAAGATGGTTTCCTCAAAGATATTGACACATGGAATGAAAAGAAATTTATTGAAAAGCTAAGAGAACTACTTGTGGATAAGAGGTAATTCTCTAGTTCTTTTTTCCCCTCTTCGATAAAGTTGTATACCCACACTCATGATAATAGAGTGGTTTTTCATTCACAAACTTATATTGTTGATAAACTTTAACTAGGTATCTTGTTATAATTGATGATGTATGGTCTATTTCGGCATGGAAAGCTATCACGGTTGCATTCCCGGATAATGACTGTTCCAGTACAATTATAGTTACTACACGCGTTTCCGATGTTGGATGGTCATGCTGCTTAAATGGCATTGACCGCAATTATCAGATGGAACCTCTAAGTGAAGTTCACTCTGGAAGACTATTTTGCAAGAGAATTTTCAGTACAAATGAGGATGGCTGCCCAGATATTTTACAGGAAGTTTCAACAGATATATTGAAGAAATGTGGCGGTCTTCCATTAGCAATTATTAGCATATCTGGCTTATTAGCAAATAGACCAGTTATCAAGGAAGAGTGGGAGAAAGTGAAAGAATCGATTGGTTTTGCATTGGACAAGAACCAAAATCTAGAAGGAATGAAAATCATACTGTCCCTTAGCTTTAATAACCTTCCAAACTATCTCAAGACTTGTTTGCTATATTTGAGCATATTTCCAGAGGATTGTATTATTGAAAGAAACATGGTAGTATGGCGATGGATAGCTGAAGGCTTTATCTCTGAAGACTGTGGGCAGAAATTGGAAGATGTTGCGGAGAGCTACTTTTATGAGCTCATCAACAAAAGTCTGGTTCAACCTGTGGACATTGGTTTTGATGGTAAGGCTCGTGCATGCCGTGTCCATGATATAATGCTTCAATTTATCTCCTCAAAAGCAACAGAAGAGAATTTTGTTACATTATTAGGTGGCCAAACTAGAAAAACGAATTCGCATCATTATGTTCGGCGATTATCCATTCAGGACACTAATAATCATTTGTCAACTCTGTTAGCAAACAAAAATTTATGCCATGTTCGAACCCTACACTGCTTTGGTGGGAACATAATTTTTTTGCCCCAGCTTTCCCGGTTTGAGATTCTACGAGTATTGGATTTTCATGGCTGTCGAGGTTTAGAGCAGTATTTGGAAAATATAGACAAGCTATTCCAGCTTGAGTACTTAAGCCTTTGTTGTTCAGACATATCACGTATACCAACACAAATTGCAAAGCTCCAAAATTTGGTGACGCTGGACCTTCGCCAAACATGCGTAGAAGAGTTTCCCACTGAATTTTGCCGATTGATAAAGCTACAACATCTTCTCAGAGATCGGATGTTGAAGCTACCGGATGGAATTGGGAATATGAGGAATCTACAGGTGCTATCAGGCATTAATATAAGCAGTAGCTCAGCGAGCGCAGTGGCAGAACTTGGTGAGCTGACCAGTTTGAGGGACCTCAAAATATGTTTGTTTGATGAACTCAGTAAGTGCAAGACAAAAGAAGAGATGTTACTGGCCTCACTTTGCAAACTA]
[+] EMBL AK072959 [CCTTCTCTCCCCCGATCCAATCTCCCGGCGAGCGAGCGAGTGGAATCGGCGGCGATCATGGCGGCGACGGCGTTCCGGCGAGGTGGAGCACGCGTGCGACGACAAGCGCCGAGCGGCTTCCATTTGCCGTGGCTGGGGGCGCAGCCGAGAAGGGCGCCAAGCCGTGCCATGGCGTTGGCGGTCCGGCGAGGCGGCGGAGCCCGAAGGTAGCTGCCAAGCCGGCGCTTATCGTCCCCGGCGAGGGACGGTGAGGAGGGGACTCCAAGGCGGCGCGCGCATGGACGTCAACCAGCGCGACCGTGATGGAGAGGCGGCGAGGGCACGCCGAGGCACACGTGGGCGAAGGAGTTGCCCGTGCGGCGACGACGACGATGCCTTCTTCCCGGCGAAGCCCGTACGGCGGCGCTAATGTCGTGCGGCATCTCCGGTGGCTTAGGGCTTCAACGATCCGAAGGTCCTGCATTACTGCAAACGGATCCTCATCAGGGGAAAGCAGTACAATGGAGCGTCGTTGACTGATCACCAACCCCAGCAAACACTAGATGCAGCATACAAATGGCTTAGCTGAGCACAAGAAGTTATAGGCTGATGGTAGAAGCTAGGAAGGAATCTGAAGGAGCTCTGGTTCCTGGCTTGATTGATCTTGCTGCTGCTTCTCCGATCCTCCGGCCTCTGCTATGTTCCTCGACTCCTGCTCCGGTTGCTATCTCACACATCTCTCTCAATTTCTACTGATATATTTTTTCAGTCCTTTATTTCCAGACCACCAAAGAACAAACTAAAGCTCAGATCGATCGGTAGCCATGGATGCCGTGGTGAGTGTCTCACATGGGGCACTGGGGCCGCTACTGGGCAAGCTCAGTACCTTGCTCGCAGACAAGTACGCGTGCTTGAAAGGTGTCCGCCGTGAGATCCATTCCCTAAGATCGGAGCTGAGCAACATGCAAGCGGCGCTCCACAAGTATGCGTCACTCGAGGACCCTGACATCCAGGTGAAGGCCTGGATCACCGAGCTGAGGGAGCTTGCCTATGACATCGAGGACTGCATAGACAAGTTTATGCACCAACTTGGTGCCAACGGTGAGCAGCACCGCACCAGTAATAGCATCGAGGACTTCTTTAGGAAGAGTATACAACGTCTCAAAACTCTTGGCCCGAGGCATAATATTGCTGGCGAGATTGAGGAACTGAAGGCACGAGTTATCTCGGTGAGAGATCAAAAGAACAGCTACAAGCTTGACGATATTTTTTGCAGTAGCTCTAGCAATACCAATGCTTCTGTTGATCCACGGTTGGCTACTCTCTTCGCGGAAGAGAACCATCTTGTCGGTATAGATGGCCCAAGGGTTGAACTTGTCAATTGGTTGGATGCAGAGAGCAGGTTGATAAAGTGTCGCAAGGTATTATCTATTGTGGGGTTTGGAGGTCTTGGGAAGACAACTCTAGCGAATGAGGTATATCGTAGGGTTAAAGTTCATTTTGACTGCCATGCATTTGTGTCAGTGTCACAAAAGCCCGATTTCAAGAATATCTTCAAGGATATAACATACAATATGCCTACGAAAGATGGTTTCCTCAAAGATATTGACACATGGAATGAAAAGAAATTTATTGAAAAGCTAAGAGAACTACTTGTGGATAAGAGGTAATTCTCTAGTTCTTTTTTCCCCTCTTCGATAAAGTTGTATACCCACACTCATGATAATAGAGTGGTTTTTCATTCACAAACTTATATTGTTGATAAACTTTAACTAGGTATCTTGTTATAATTGATGATGTATGGTCTATTTCGGCATGGAAAGCTATCACGGTTGCATTCCCGGATAATGACTGTTCCAGTACAATTATAGTTACTACACGCGTTTCCGATGTTGGATGGTCATGCTGCTTAAATGGCATTGACCGCAATTATCAGATGGAACCTCTAAGTGAAGTTCACTCTGGAAGACTATTTTGCAAGAGAATTTTCAGTACAAATGAGGATGGCTGCCCAGATATTTTACAGGAAGTTTCAACAGATATATTGAAGAAATGTGGCGGTCTTCCATTAGCAATTATTAGCATATCTGGCTTATTAGCAAATAGACCAGTTATCAAGGAAGAGTGGGAGAAAGTGAAAGAATCGATTGGTTTTGCATTGGACAAGAACCAAAATCTAGAAGGAATGAAAATCATACTGTCCCTTAGCTTTAATAACCTTCCAAACTATCTCAAGACTTGTTTGCTATATTTGAGCATATTTCCAGAGGATTGTATTATTGAAAGAAACATGGTAGTATGGCGATGGATAGCTGAAGGCTTTATCTCTGAAGACTGTGGGCAGAAATTGGAAGATGTTGCGGAGAGCTACTTTTATGAGCTCATCAACAAAAGTCTGGTTCAACCTGTGGACATTGGTTTTGATGGTAAGGCTCGTGCATGCCGTGTCCATGATATAATGCTTCAATTTATCTCCTCAAAAGCAACAGAAGAGAATTTTGTTACATTATTAGGTGGCCAAACTAGAAAAACGAATTCGCATCATTATGTTCGGCGATTATCCATTCAGGACACTAATAATCATTTGTCAACTCTGTTAGCAAACAAAAATTTATGCCATG ]
[+] EMBL AU057075 [ ACTGTCCCTTAGCTTTAATAACCTTCCAAACTNTCTCAAGACTTGNTTGCTATATTTGAGCATATTTCCAGAGGATTGTATTATTGAAAGAAACATGGTAGTATGGCGATGGATAGCTGAAGGCTTTATCTCTGAAGACTGTGGGCAGAAATTGGAAGATGTTGCGGAGAGCTACTTTTATGAGCTCATCAACAAAAGTCTGGTTCAACCTGTGGACATTGGTTTTGATGGTAAGGCTCGTGCATGCCGTGTCCATGATATAATGCTTCAATTTATCTCCTCAAAAGCAACAGAAGAGAATTTTGTTACATTATTAGGTGGCCAAACTAGAAAAACGAATTCGCATCATTATGTTCGGCGATTATCCATTCAGGACACTAATAATCATTTGTCAACTCTGTTAGCAAACAAAAAaaaaaaaaa ]
[-] EMBL CB634524 [ GGAAGATGTTGCAGAGAGCTACTTTTATGAGCTTATCAACAAAAGCCTGGTTCAACCTGTGGACATTGGTTTTGATGGTAAGGCTCGTGCATGCCGTGTCCATGATATAATGCTTGAATTTATCTCCTCAAAAGCAACAGAAGAGAATTTTGTTACATTATTAGGTGGCCAAACTAGAAAAACGAATTCGCATCATTATGTTCGGTGATTATCCATTCAGGACACTAATAATCATTTGTCAACTCTGTTAGCAAACAAAAATTTATGCCATGTTCGAACCCTACACTGCTTTGGTGGGAACATAATTTTTTTGCCCCAGCTTTCCCGGTTTGAGATTCTACGAGTATTGGATTTTCATGGCTGTCGAGGTTTAGAGCAGTATTTGGAAAATATAGACAAGCTATTCCAGCTTGAGTACTTAAGCCTTTGTTGTTCAGACATATCACGTATACCAACACAAATTGCAAAGCTCCAAAATTTGGTGACGCTGGACCTTCGCCAAACATGCGTAGAAGAGTTTCCCACTGAATTTTGCCGATTGATAAAGCTACAACATCTTCTCAGAGATCGGATGTTGAAGCTACCGGATGGAATTGGGAATATGAGGAATCTACAGGTGCTATCAGGCATTAATATAAGCAGTAGCTCAGCGAGCGCAGTGGCAGAACTTGGTGAGCTGACCAGTTTGAGGGACCTCAAAATATGTTTGTTTGATGAACTCAGTAAGTGCAAGACAAAAGAAGAGATGTTACTGGCCTCACTTTGCAAACTA]
consensusID : consensus_12363#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1831 fasta sequence
[TTTTCATTTCTCCTCTTCTCTCTGATCTCTCCCCCGATCTAATCTCCCGGCGAGCGAGCGAGTGGAATCGGCGGCGATCTTGGCGGTGACGGCGTTCCGGCGAGGTGGAGCACGCGTGCGACGACGAGCACCGAGCGGCTTCCATTTGCGCCGGCTGGGGGGAGCACGCACGAGGGCGGCGGCAAGCCGTGCCGGGTGTCGGCGGTCCGGCGAGGCGGGCGCACAAGCGGCGGCGAGCACCGATGCGGCCCGGACCTCGTCGGCGGGGGGGCGGAGCCCGAAGGCAGCCGCCAAGCCGACGCTTCCCGTCCCCGGCGAGGGAAAGTGAGGAGGTGAAGTGGCGGCGATGCCGCTTCCCGGAGAAATTCCGGTGGGTTTAGAGGCTTCGAAACCCTAATTAATCAATAAATTGATCTGTGAAGGGGTTTCTAAACTAAATTGTTTTTGAATGCTCGATGTAGGCGTTGAACACCGGCGGCCACGGCAGCTCATACGGGAACGCGACGCCGGCGTGCGCGTTCCGCTGGTGCTCCCGTTCCACCGCCATGGTCCGGAGCCACGCTTCCTCCGACGGCGACAGACAGCATGAGGTACCCCCTTTCCGCCCCCGACGATTACGCCAGCGATGCCGCAGCCGAAGTACACATCTCCTTGCGGCCCGGCAGCCCGCGGGTGGCCACGGACAAATTCAGGGTGTTCTTGACTGAGCAGTGAGCACCCAGTCGCCGTTGCTGGGTAGCCAGGAAAATACTCTCAGGTGGTCGTCGTTGCTCACGCCGATGATACGGAGCTCGCCGCCGCCATCGTCGTCACCGGCGACGACCCTGAACTTGCACTTGCGGGACCACTCCCTCATGTGGTCTGGGAATACGACGATGGAGAACCTCGCCGTGAGCTCGTCAAGGGCTAGGCGGCTAGGAAGGCACCGAGGCTGCCGCGGCGTCTCATCTCCGACGTGGGGACGGCGACCATCTGGTAGCGCCGCGTAAGTGGCTCGCAGACGATGAGGCCATCAGGGCAGCAGCGGCTGTCGGAGTCTCGGCGATCGTCCAGGAGGCGGTGTCCGGGACGAAGTCGAGTGAGAGGCGGCAGCCGTAGACGAGAACCGGCCTGGAGACGTGGACGAACGCCGCATGGGAGACCGCGCCGCCAACGGCGTGGTATTGGCCGACGAGGTCGGGCCCGTGGTGGACACGGAAGCGGCGGAGGAAGACACTGCACCGTCGGCGGCATCAACGACGACGACGCGGCGCTAGCGCTTGCAGACGGACGCGGCGCGGATGAGGCAGGCGGCGGATCGGAGTGGAGGCGCAGCAGGACGAGCTCGAGGACTTTGTCGGAGATGTCGTCGACCACCCACGTAGCCACGTAGGCCTCGCCGTCGCCGGCAGCAACAAGACGGTCTTCTTCCTCCGCGCCGCCGTGCTCCGGTTCTTGCAAGTTGCGACGGCTCATTCTCGGATCCATTAACCTTGATCTTCTTCTCGCGTTTGTTTATGGCTTGTTATAGAGTATACCATATCGTGCATCATGGTAGTATTTTATACTCACTCCGTTTCAGGTTATAAGACTTTCTAGCATTACCCACGTTCATATGAACTAGGAAGGTAGTCCGCGCATTCGCGTGGGCATATATTTTAAGATGTGTTTGAGATATTTACAGTTATAAGGATGGAATATTAACTGTAGAACACCTCTCATGCTTCAAAAAACAAATCTCCGTATAATTTTTTCTGTCAGCATAGCGTATAATTTTTCCAACCTAGCTTTATACCATACACTATTTGGTTAATCCCAATAAGTAATTATCAATAGTCTTTATCATATAAAA]
[+] EMBL AK068435 [TTTTCATTTCTCCTCTTCTCTCTGATCTCTCCCCCGATCTAATCTCCCGGCGAGCGAGCGAGTGGAATCGGCGGCGATCTTGGCGGTGACGGCGTTCCGGCGAGGTGGAGCACGCGTGCGACGACGAGCACCGAGCGGCTTCCATTTGCGCCGGCTGGGGGGAGCACGCACGAGGGCGGCGGCAAGCCGTGCCGGGTGTCGGCGGTCCGGCGAGGCGGGCGCACAAGCGGCGGCGAGCACCGATGCGGCCCGGACCTCGTCGGCGGGGGGGCGGAGCCCGAAGGCAGCCGCCAAGCCGACGCTTCCCGTCCCCGGCGAGGGAAAGTGAGGAGGTGAAGTGGCGGCGATGCCGCTTCCCGGAGAAATTCCGGTGGGTTTAGAGGCTTCGAAACCCTAATTAATCAATAAATTGATCTGTGAAGGGGTTTCTAAACTAAATTGTTTTTGAATGCTCGATGTAGGCGTTGAACACCGGCGGCCACGGCAGCTCATACGGGAACGCGACGCCGGCGTGCGCGTTCCGCTGGTGCTCCCGTTCCACCGCCATGGTCCGGAGCCACGCTTCCTCCGACGGCGACAGACAGCATGAGGTACCCCCTTTCCGCCCCCGACGATTACGCCAGCGATGCCGCAGCCGAAGTACACATCTCCTTGCGGCCCGGCAGCCCGCGGGTGGCCACGGACAAATTCAGGGTGTTCTTGACTGAGCAGTGAGCACCCAGTCGCCGTTGCTGGGTAGCCAGGAAAATACTCTCAGGTGGTCGTCGTTGCTCACGCCGATGATACGGAGCTCGCCGCCGCCATCGTCGTCACCGGCGACGACCCTGAACTTGCACTTGCGGGACCACTCCCTCATGTGGTCTGGGAATACGACGATGGAGAACCTCGCCGTGAGCTCGTCAAGGGCTAGGCGGCTAGGAAGGCACCGAGGCTGCCGCGGCGTCTCATCTCCGACGTGGGGACGGCGACCATCTGGTAGCGCCGCGTAAGTGGCTCGCAGACGATGAGGCCATCAGGGCAGCAGCGGCTGTCGGAGTCTCGGCGATCGTCCAGGAGGCGGTGTCCGGGACGAAGTCGAGTGAGAGGCGGCAGCCGTAGACGAGAACCGGCCTGGAGACGTGGACGAACGCCGCATGGGAGACCGCGCCGCCAACGGCGTGGTATTGGCCGACGAGGTCGGGCCCGTGGTGGACACGGAAGCGGCGGAGGAAGACACTGCACCGTCGGCGGCATCAACGACGACGACGCGGCGCTAGCGCTTGCAGACGGACGCGGCGCGGATGAGGCAGGCGGCGGATCGGAGTGGAGGCGCAGCAGGACGAGCTCGAGGACTTTGTCGGAGATGTCGTCGACCACCCACGTAGCCACGTAGGCCTCGCCGTCGCCGGCAGCAACAAGACGGTCTTCTTCCTCCGCGCCGCCGTGCTCCGGTTCTTGCAAGTTGCGACGGCTCATTCTCGGATCCATTAACCTTGATCTTCTTCTCGCGTTTGTTTATGGCTTGTTATAGAGTATACCATATCGTGCATCATGGTAGTATTTTATACTCACTCCGTTTCAGGTTATAAGACTTTCTAGCATTACCCACGTTCATATGAACTAGGAAGGTAGTCCGCGCATTCGCGTGGGCATATATTTTAAGATGTGTTTGAGATATTTACAGTTATAAGGATGGAATATTAACTGTAGAACACCTCTCATGCTTCAAAAAACAAATCTCCGTATAATTTTTTCTGTCAGCATAGCGTATAATTTTTCCAACCTAGCTTTATACCATACACTATTTGGTTAATCCCAATAAGTAATTATCAATAGTCTTTATCATATAAAA]
consensusID : consensus_12363#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1647 fasta sequence
[TTTTCATTTCTCCTCTTCTCTCTGATCTCTCCCCCGATCTAATCTCCCGGCGAGCGAGCGAGTGGAATCGGCGGCGATCTTGGCGGTGACGGCGTTCCGGCGAGGTGGAGCACGCGTGCGACGACGAGCACCGAGCGGCTTCCATTTGCGCCGGCTGGGGGGAGCACGCACGAGGGCGGCGGCAAGCCGTGCCGGGTGTCGGCGGTCCGGCGAGGCGGGCGCACAAGCGGCGGCGAGCACCGATGCGGCCCGGACCTCGTCGGCGGGGGGGCGGAGCCCGAAGGCAGCCGCCAAGCCGACGCTTCCCGTCCCCGGCGAGGGAAAGTGAGGAGGTGAAGTGGCGGCGATGCCGCTTCCCGGAGAAATTCCGGTGGGTTTAGAGGCTTCGAAATCCGGCGTTGAACACCGGCGGCCACGGCAGCTCATACGGGAACGCGACGCCGGCGTGCGCGTTCCGCTGGTGCTCCCGTTCCACCGCCATGGTCCGGAGCCACGCTTCCTCCGACGGCGACAGACAGCATGAGGTACCCCCTTTCCGCCCCCGACGATTACGCCAGCGATGCCGCAGCCGAAGTACACATCTCCTTGCGGCCCGGCAGCCCGCGGGTGGCCACGGACAAATTCAGGGTGTTCTTGACTGAGCAGTGAGCACCCAGTCGCCGTTGCTGGGTAGCCAGGAAAATACTCTCAGGTGGTCGTCGTTGCTCACGCCGATGATACGGAGCTCGCCGCCGCCATCGTCGTCACCGGCGACGACCCTGAACTTGCACTTGCGGGACCACTCCCTCATGTGGTCTGGGAATACGACGATGGAGAACCTCGCCGTGAGCTCGTCAAGGGCTAGGCGGCTAGGAAGGCACCGAGGCTGCCGCGGCGTCTCATCTCCGACGTGGGGACGGCGACCATCTGGTAGCGCCGCGTAAGTGGCTCGCAGACGATGAGGCCATCAGGGCAGCAGCGGCTGTCGGAGTCTCGGCGATCGTCCAGGAGGCGGTGTCCGGGACGAAGTCGAGTGAGAGGCGGCAGCCGTAGACGAGAACCGGCCTGGAGACGTGGACGAACGCCGCATGGGAGACCGCGCCGCCAACGGCGTGGTATTGGCCGACGAGGTCGGGCCCGTGGTGGACACGGAAGCGGCGGAGGAAGACACTGCACCGTCGGCGGCATCAACGACGACGACGCGGCGCTAGCGCTTGCAGACGGACGCGGCGCGGATGAGGCAGGCGGCGGATCGGAGTGGAGGCGCAGCAGGACGAGCTCGAGGACTTTGTCGGAGATGTCGTCGACCACCCACGTAGCCACGTAGGCCTCGCCGTCGCCGGCAGCAACAAGACGGTCTTCTTCCTCCGCGCCGCCGTGCTCCGGTTCTTGCAAGTTGCGACGGCTCATTCTCGGATCCATTAACCTTGATCTTCTTCTCGCGTTTGTTTATGGCTTGTTATAGAGTATACCATATCGTGCATCATGGTAGTATTTTATACTCACTCCGTTTCAGGTTATAAGACTTTCTAGCATTACCCACGTTCATATGAACTAGGAAGGTAGTCCGCGCATTCGCGTGGGCATATATTTTAAGATGTGTTTGAGATATTTACAGTTATAAGGATGGAATATTAACTGTAGAACACCTCTCATGCTTCAAAAAAC]
[+] EMBL AK073998 [TTTTCATTTCTCCTCTTCTCTCTGATCTCTCCCCCGATCTAATCTCCCGGCGAGCGAGCGAGTGGAATCGGCGGCGATCTTGGCGGTGACGGCGTTCCGGCGAGGTGGAGCACGCGTGCGACGACGAGCACCGAGCGGCTTCCATTTGCGCCGGCTGGGGGGAGCACGCACGAGGGCGGCGGCAAGCCGTGCCGGGTGTCGGCGGTCCGGCGAGGCGGGCGCACAAGCGGCGGCGAGCACCGATGCGGCCCGGACCTCGTCGGCGGGGGGGCGGAGCCCGAAGGCAGCCGCCAAGCCGACGCTTCCCGTCCCCGGCGAGGGAAAGTGAGGAGGTGAAGTGGCGGCGATGCCGCTTCCCGGAGAAATTCCGGTGGGTTTAGAGGCTTCGAAATCCGGCGTTGAACACCGGCGGCCACGGCAGCTCATACGGGAACGCGACGCCGGCGTGCGCGTTCCGCTGGTGCTCCCGTTCCACCGCCATGGTCCGGAGCCACGCTTCCTCCGACGGCGACAGACAGCATGAGGTACCCCCTTTCCGCCCCCGACGATTACGCCAGCGATGCCGCAGCCGAAGTACACATCTCCTTGCGGCCCGGCAGCCCGCGGGTGGCCACGGACAAATTCAGGGTGTTCTTGACTGAGCAGTGAGCACCCAGTCGCCGTTGCTGGGTAGCCAGGAAAATACTCTCAGGTGGTCGTCGTTGCTCACGCCGATGATACGGAGCTCGCCGCCGCCATCGTCGTCACCGGCGACGACCCTGAACTTGCACTTGCGGGACCACTCCCTCATGTGGTCTGGGAATACGACGATGGAGAACCTCGCCGTGAGCTCGTCAAGGGCTAGGCGGCTAGGAAGGCACCGAGGCTGCCGCGGCGTCTCATCTCCGACGTGGGGACGGCGACCATCTGGTAGCGCCGCGTAAGTGGCTCGCAGACGATGAGGCCATCAGGGCAGCAGCGGCTGTCGGAGTCTCGGCGATCGTCCAGGAGGCGGTGTCCGGGACGAAGTCGAGTGAGAGGCGGCAGCCGTAGACGAGAACCGGCCTGGAGACGTGGACGAACGCCGCATGGGAGACCGCGCCGCCAACGGCGTGGTATTGGCCGACGAGGTCGGGCCCGTGGTGGACACGGAAGCGGCGGAGGAAGACACTGCACCGTCGGCGGCATCAACGACGACGACGCGGCGCTAGCGCTTGCAGACGGACGCGGCGCGGATGAGGCAGGCGGCGGATCGGAGTGGAGGCGCAGCAGGACGAGCTCGAGGACTTTGTCGGAGATGTCGTCGACCACCCACGTAGCCACGTAGGCCTCGCCGTCGCCGGCAGCAACAAGACGGTCTTCTTCCTCCGCGCCGCCGTGCTCCGGTTCTTGCAAGTTGCGACGGCTCATTCTCGGATCCATTAACCTTGATCTTCTTCTCGCGTTTGTTTATGGCTTGTTATAGAGTATACCATATCGTGCATCATGGTAGTATTTTATACTCACTCCGTTTCAGGTTATAAGACTTTCTAGCATTACCCACGTTCATATGAACTAGGAAGGTAGTCCGCGCATTCGCGTGGGCATATATTTTAAGATGTGTTTGAGATATTTACAGTTATAAGGATGGAATATTAACTGTAGAACACCTCTCATGCTTCAAAAAAC]
consensusID : consensus_12363#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1042 fasta sequence
[ACTCGTCCTTGAGCCATGCCCNCTTTTTCATCAGATCCTTAAAACATTCTTCCATGCACTTATCATTGCTGAGGTAATTCTTGGACAGAGTGATAGGGAAGTTCTTCTTGAGCTCAAGAACTTTTTACAGTTTCAGAACCCGATAAACCATGGTG-GGTATAACAGTTGGCCAGAGTCAGGGACCTCACCATGCCATTGGCAAGGTGTTGGTTGTGATGCCTCTGGCAGGGTTAATTTTCTCGATCTTTCAAACTCAAATATATCTGGTCC-AGCCTTCCAAAACCTGTCACGCCTCAGTGGGCTCACACACTTGGACCTCTCAGCAAACAGCATCACTGGGGAGCTGCATGATGATCTCAAGAATTGCCTGCATCTCCAGTACCTAGACTTATCTTACAATCTCATCAGTGGTATTCTCGACGTCTCCAGCCTCGCCAACCTGCAGACACTAGATGTGTCCCAAAATCGGTTCGAAGGCGGCATTAGCGCAAACTTCCCAGCAATCTGCCGCAACCTAAGTGCTATCAACTTGTCCAGCAATAACCTGACAGGAAGTATAAGTGGATTGTTCAACAACTGCTTGAAGCTCCAGGATGTTGATCTCAGCTGGAACAGCTTCACTGGCAACGTCTGGAATGGAATTGCAAGGCTTAGACAGTTCAAGGCTGGAAAGAACAACTTCGCTGGGAGCATCTCTTCAAGAACTTTTTCCACGGGGTGCAAGCTCCAGTTACTAGATCTCTCCAGTAATCATTTCTATGGCAATTTCCCGAGTTCAATCGCAAATTGCGCCGGTTTGACATACCTGTCGATATGGGACAATCACTTCAATGGATCTATACCACCAGGAATTGGCTCAATCCATGGGCTTGAGGAACTCGTTCTCACGAGCAACCACTTCGATCGTGAGATACCACTTGAGCTGATGAACTGCACCAGCTCAAGTGGTATCTCCCTCGTGCCGAATTCAGCACGAGGCGGCGAGCGAGCGAGTGGAATCGGCGGCGATCATGGCGGCGACGGTGTTCCGGCGAGGTGTAGC]
[+] EMBL CB630736 [ACTCGTCCTTGAGCCATGCCCNCTTTTTCATCAGATCCTTAAAACATTCTTCCATGCACTTATCATTGCTGAGGTAATTCTTGGACAGAGTGATAGGGAAGTTCTTCTTGAGCTCAAGAACTTTTTACAGTTTCAGAACCCGATAAACCATGGTG GGTATAACAGTTGGCCAGAGTCAGGGACCTCACCATGCCATTGGCAAGGTGTTGGTTGTGATGCCTCTGGCAGGGTTAATTTTCTCGATCTTTCAAACTCAAATATATCTGGTCC AGCCTTCCAAAACCTGTCACGCCTCAGTGGGCTCACACACTTGGACCTCTCAGCAAACAGCATCACTGGGGAGCTGCATGATGATCTCAAGAATTGCCTGCATCTCCAGTACCTAGACTTATCTTACAATCTCATCAGTGGTATTCTCGACGTCTCCAGCCTCGCCAACCTGCAGACACTAGATGTGTCCCAAAATCGGTTCGAAGGCGGCATTAGCGCAAACTTCCCAGCAATCTGCCGCAACCTAAGTGCTATCAACTTGTCCAGCAATAACCTGACAGGAAGTATAAGTGGATTGTTCAACAACTGCTTGAAGCTCCAGGATGTTGATCTCAGCTGGAACAGCTTCACTGGCAACGTCTGGAATGGAATTGCAAGGCTTAGACAGTTCAAGGCTGGAAAGAACAACTTCGCTGGGAGCATCTCTTCAAGAACTTTTTCCACGGGGTGCAAGCTCCAGTTACTAGATCTCTCCAGTAATCATTTCTATGGCAATTTCCCGAGTTCAATCGCAAATTGCGCCGGTTTGACATACCTGTCGATATGGGACAATCACTTCCATGGATCTATACCACCAGGAA ]
[+] EMBL CB635488 [ACTCGCCTTTGAGCCATGCCCCATTTTTCATCAGATCCTTAAAACATTCTTCCATGCACTTATCATTGCTGAGGTAATTCTTGGACAGAGTGATAGGGAAGTTCTTCTTGAGCTCAAGAACTTTTTACAGTTTCAGAACCCGATAAACCATGGTGCGGTATAACAGTTGGCCAGAGTCAGGGACCTCACCATGCCATTGGCAAGGTGTTGGTTGTGATGCCTCTGGCAGGGTTAATTTTCTCGATCTTTCAAACTCAAATATATCTGGTCC AGCCTTCCAAAACCTGTCACGCCTCAGTGGGCTCACACACTTGGACCTCTCAGCAAACAGCATCACTGGGGAGCTGCATGATGATCTCAAGAATTGCCTGCATCTCCAGTACCTAGACTTATCTTACAATCTCATCAGTGGTATTCTCGACGTCTCCAGCCTCGCCAACCTGCAGACACTAGATGTGTCCCAAAATCGGTTCGAAGGCGGCATTAGCGCAAACTTCCCAGCAATCTGCCGCAACCTAAGTGCTATCAACTTGTCCAGCAATAACCTGACAGGAAGTATAAGTGGATTGTTCAACAACTGCTTGAAGCTCCAGGATGTTGATCTCAGCTGGAACAGCTTCACTGGCAACGTCTGGAATGGAATTGCAAGGCTTAGACAGTTCAAGGCTGGAAAGAACAACTTCGCTGGGAGCATCTCTTCAAGAACTTTTTCCACGGGGTGCAAGCTCCAGTTACTAGATCTCTCCAGTAATCATTTCTATGGCAATTTCCCGAGTTCAATCGCAAATTGCGCCGGTTTGACATACCTGTCGATATGGGACAATCACTTCAATGG ]
[+] EMBL CB634523 [ atgCTGGCCCTAGCCTTCCAAAACCTGTCACGCCTCAGTGGGCTCACACACTTGGACCTCTCAGCAAACAGCATCACTGGGGACCTGCATGATGATCTCAAGAATTGCCTGCATCTCCAGTACCTAGACTTATCTTACAATCTCATCAGTGGTATTCTCGACGTCTCCAGCCTCGCCAACCTGCAGACACTAGATGTGTCCCAAAATCGGTTCGAAGGCGGCATTAGCGCAAACTTCCCAGCAATCTGCCGCAACCTAAGTGCTATCAACTTGTCCAGCAATAACCTGACAGGAAGTATAAGTGGATTGTTCAACAACTGCTTGAAGCTCCAGGATGTTGATCTCAGCTGGAACAGCTTCACTGGCAACGTCTGGAATGGAATTGCAAGGCTTAGACAGTTCAAGGCTGGAAAGAACAACTTCGCTGGGAGCATCTCTTCAAGAACTTTTTCCACGGGGTGCAAGCTCCAGTTACTAGATCTCTCCAGTAATCATTTCTATGGCAATTTCCCGAGTTCAATCGCAAATTGCGCCGGTTTGACATACCTGTCGATATGGGACAATCACTTCAATGGATCTATACCACCAGGAATTGGCTCAATCCATGGGCTTGAGGAACTCGTTCTCACGAGCAACCACTTCGATCGTGAGATACCACTTGAGCTGATGAACTGCACCAGCTCAAGTGGTATCTCCCTCGTGCCGAATTCAGCACGAGGCGGCGAGCGAGCGAGTGGAATCGGCGGCGATCATGGCGGCGACGGTGTTCCGGCGAGGTGTAGC]
consensusID : consensus_12363#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 730 fasta sequence
[ATTCGGCGTCCGGCGAGCGAGCGAGCGAATCGGCAGCGATGTTGTGACGGCGGTCCGGCGAGGCAGCGCGCGCGTGCGGCAGCGAGCGCCGTAGCGGCTCCACCTCGGCTGGCTGGGGGGCGCACCCAAGGGCGGCGCCAAGCCGTGTGCTACGGCGTCGGCGGTCCGGCGAGGCGGCGCACTAGCGACGGCAAGCGTCTATGCGGCCGGACCTCGTCAGCGGGGGTGCGGAGCCCGAAGGCAGCCGCCAAGCCGACGCTTCCCGTCCCCGGTGAGGGACGGTGGAGAGACAAGCTCCAAGGCGGCGCGCGCACGGCGGTCAACCGGCGCGGCCCCGAGGAGACCGGAGAGCTCCGGCAAGCTTAGGGGGTCTAAATCCGGTAATTAACCCGAACTCAAACCTAATTTTGACTTGAATTTGGATTTAATTCTGGTATTTGTGACTTAGGGTTCTTCCCCCCAAAAATTAGGGTTCCTCATTTGGGGATTTTAGGCCGATTGGATCCGGCTTATTGGGGATTCCGGGAAATTTCAATCTTGTTTATTCCCTTTTGCTTAACAGTGGGGAATTTCAATCTAGTTTATCCCCTGTTTTCCCCAATTTACTTCTTAATCCACTGATCTTATATGATAAGAACCTACGGTTTATGAGTTGGGAACAATGAGAGTCTCAATCTGGTTTATCTCATTCGCTCTCCGCTTAGTAAAATTCCAGAGAAAAAAAAATCTC]
[+] EMBL AK063360 [ATTCGGCGTCCGGCGAGCGAGCGAGCGAATCGGCAGCGATGTTGTGACGGCGGTCCGGCGAGGCAGCGCGCGCGTGCGGCAGCGAGCGCCGTAGCGGCTCCACCTCGGCTGGCTGGGGGGCGCACCCAAGGGCGGCGCCAAGCCGTGTGCTACGGCGTCGGCGGTCCGGCGAGGCGGCGCACTAGCGACGGCAAGCGTCTATGCGGCCGGACCTCGTCAGCGGGGGTGCGGAGCCCGAAGGCAGCCGCCAAGCCGACGCTTCCCGTCCCCGGTGAGGGACGGTGGAGAGACAAGCTCCAAGGCGGCGCGCGCACGGCGGTCAACCGGCGCGGCCCCGAGGAGACCGGAGAGCTCCGGCAAGCTTAGGGGGTCTAAATCCGGTAATTAACCCGAACTCAAACCTAATTTTGACTTGAATTTGGATTTAATTCTGGTATTTGTGACTTAGGGTTCTTCCCCCCAAAAATTAGGGTTCCTCATTTGGGGATTTTAGGCCGATTGGATCCGGCTTATTGGGGATTCCGGGAAATTTCAATCTTGTTTATTCCCTTTTGCTTAACAGTGGGGAATTTCAATCTAGTTTATCCCC ]
[+] EMBL CB678965 [ cagcccctTTGTGACGGCGGTCCGGCGAGGCAGCGCGCGCGTGCGGCAGCGAGCGCCGTAGCGGCTCCACCTCGGCTGGCTGGGGGGCGCACCCAAGGGCGGCGCCAAGCCGTGTGCTACGGCGTCGGCGGTCCGGCGAGGCGGCGCACTAGCGACGGCAAGCGTCTATGCGGCCGGACCTCGTCAGCGGGGGTGCGGAGCCCGAAGGCAGCCGCCAAGCCGACGCTTCCCGTCCCCGGTGAGGGACGGTGGAGAGACAAGCTCCAAGGCGGCGCGCGCACGGCGGTCAACCGGCGCGGCCCCGAGGAGACCGGAGAGCTCCGGCAAGCTTAGGGGGTCTAAATCCGGTAATTAACCCGAACTCAAACCTAATTTTGACTTGAATTTGGATTTAATTCTGGTATTTGTGACTTACGGTTCTTCCCCCCAAAAATTAAGGTTCCTCATTTGGGGATTTTAAGCCGATTGGATCCGGCTTATTGGGGATTCCGGGAAATTTCAATCTTGTTTATTCCCTTTTGCTTAACAGTGGGGAATTTCAATCTAGTTTATCCCCTGTTTTCCCCAATTTACTTCTTAATCCACTGATCTTATATGATAAGAACCTACGGTTTATGAGTTGGGAACAATGAGAGTCTCAATCTGGTTTATCTCATTCGCTCTCCGCTTAGTAAAATTCCAGAGAAAAAAAAATCTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12363#1 TTTTCATTTCTCCTCTTCTCTCTGATCTCTCCCCCGATCTAATCTCCCGGCGAGCGAGCG 60
consensus_12363#2 TTTTCATTTCTCCTCTTCTCTCTGATCTCTCCCCCGATCTAATCTCCCGGCGAGCGAGCG 60
consensus_12363#0 ----------------------CCTTCTCTCCCCCGATCCAATCTCCCGGCGAGCGAGCG 38
consensus_12363#4 ------------------------------------ATTCGGCGTCC-GGCGAGCGAGCG 23
consensus_12363#3 ---------------ACTCGTCCTTGAGCCATGCCCNCTTTTTCATCAGATCCTTAAAAC 45
* * *
consensus_12363#1 AGTGGAATCGGCGGCGATCTTGGCGGTGACGGCGTTCCGGCGAGGTGGAGCACGCGTGCG 120
consensus_12363#2 AGTGGAATCGGCGGCGATCTTGGCGGTGACGGCGTTCCGGCGAGGTGGAGCACGCGTGCG 120
consensus_12363#0 AGTGGAATCGGCGGCGATCATGGCGGCGACGGCGTTCCGGCGAGGTGGAGCACGCGTGCG 98
consensus_12363#4 AGCG-AATCGGCAGCGAT----GTTGTGACGGCGGTCCGGCGAGGCAGCGCGCGCGTGCG 78
consensus_12363#3 ATTCTTCCATGCACTTATCATTGCTGAGGTAATTCTTGGACAGAGTGATAGGGAAGTTCT 105
* ** ** * * * * * * * ** *
consensus_12363#1 ACGACGAGCACCG-AGCGGCTTCCATTTGCGCCGGCTGGGGGGAGCACGCACGAGGGCGG 179
consensus_12363#2 ACGACGAGCACCG-AGCGGCTTCCATTTGCGCCGGCTGGGGGGAGCACGCACGAGGGCGG 179
consensus_12363#0 ACGACAAGCGCCG-AGCGGCTTCCATTTGCCGTGGCTGGGG---GCGCAGCCGAGAAGGG 154
consensus_12363#4 GCAGCGAGCGCCGTAGCGGCTCCACCTCGGCTGGCTGGGGG---GCGCACCCAAGGGCGG 135
consensus_12363#3 TCT-TGAGCTCAAGAACTTTTTACAGTTTCAGAACCCG--------ATAAACCATGGTGG 156
* *** * * * * * * * * **
consensus_12363#1 CGGCAAGCCGTG---CCGGGTGTCGGCGGTCCGGCGAGGCGGGCGCACAAGCGGCGGCGA 236
consensus_12363#2 CGGCAAGCCGTG---CCGGGTGTCGGCGGTCCGGCGAGGCGGGCGCACAAGCGGCGGCGA 236
consensus_12363#0 CGCCAAGCCGTG--CCATGGCGTTGGCGGTCCGGCGAGGCGG-CGGAGCC-CGAAGGTAG 210
consensus_12363#4 CGCCAAGCCGTGTGCTACGGCGTCGGCGGTCCGGCGAGGCGG-CGCACTAGCGACGGCAA 194
consensus_12363#3 GTATAACAGTTG---GCCAGAGTCAGGGACCTCACCATGCCATTGGCAAGGTGTTGGTTG 213
** ** * ** * * * * * ** * * **
consensus_12363#1 GCACCGATGCGGC-----CCGGACCTCGTCGGCGGGGGGGCGGAG----CCCGAAGGCAG 287
consensus_12363#2 GCACCGATGCGGC-----CCGGACCTCGTCGGCGGGGGGGCGGAG----CCCGAAGGCAG 287
consensus_12363#0 CTGCCAAGCCGGCGCTTATCGTCCCCGGCGAGGGACGGTGAGGAGGGGACTCCAAGGCGG 270
consensus_12363#4 GCGTCTATGCGGC------CGGACCTCGTCAGCGGGGGTGCGGAG----CCCGAAGGCAG 244
consensus_12363#3 TGATGCCTCTGGC------AGGGTTAATTTTCTCGATCTTTCAAA----CTCAAATATAT 263
*** * * * * **
consensus_12363#1 CCGCCAAGCCGACGCTTCCCGTCCC--CGGCGAGGGAAAGTGAGGAGGTGAA----GTGG 341
consensus_12363#2 CCGCCAAGCCGACGCTTCCCGTCCC--CGGCGAGGGAAAGTGAGGAGGTGAA----GTGG 341
consensus_12363#0 CGCGCGCATGGACGTCAACCAGCGCGACCGTGATGGAGAGGCGGCGAGGGCACGCCGAGG 330
consensus_12363#4 CCGCCAAGCCGACGCTTCCCGTCCC--CGGTGAGGGACGGTGGAGAGACAAGCTCCAAGG 302
consensus_12363#3 CTG----GTCCAGCCTTCCAAAACC--TGTCACGCCTCAGTGGGCTCACACACTTGGACC 317
* * * * *
consensus_12363#1 CG-------GCGATGCCGCTTCCCGGAGAAATTC-CGGTGGGTTTAGAGGCTTC--GAAA 391
consensus_12363#2 CG-------GCGATGCCGCTTCCCGGAGAAATTC-CGGTGGGTTTAGAGGCTTC--GAAA 391
consensus_12363#0 CACACGTGGGCGAAGGAGTTGCCCG-TGCGGCGA-CGACGA---CGATGCCTTCTTCCCG 385
consensus_12363#4 CG-GCGCGCGCACGGCGGTCAACCGGCGCGGCCC-CGAGGAGACCGGAGAGCTCCGGCAA 360
consensus_12363#3 TC----TCAGCAAACAGCATCACTGGGGAGCTGCATGATGATCTCAAGAATTGCCTGCAT 373
** * * * * * *
consensus_12363#1 CCCTAATTAATCAATAAATTGATCTGTGAAGGGGTTTCTAAACTAAATTGTTTTTGAATG 451
consensus_12363#2 TCC--------------------------------------------------------- 394
consensus_12363#0 GCGAAGCCCGTACGGCGGCGCTAATGTCGTGCGGCATCTCCGGTGGCTTAGGGCTTCAA- 444
consensus_12363#4 GCTTAGGGGGTCTAAATCCGGTAAT-TAACCCGAACTCAAACCTAATTTTGACTTGAAT- 418
consensus_12363#3 CTCCAGTA---CCTAGACTTATCTTACAATCTCA--TCAGTGGTATTCTCGACGTCTCCA 428
consensus_12363#1 CTCGATGTAGGCGTTGAACACCGGCGGCCACGGCAGCTCAT-ACGGGAACGCGACGCCGG 510
consensus_12363#2 ---------GGCGTTGAACACCGGCGGCCACGGCAGCTCAT-ACGGGAACGCGACGCCGG 444
consensus_12363#0 --CGATCCGAAGGTCCTGCATTACTGCAAACGGATCCTCATCAGGGGAAAGCAGTACAAT 502
consensus_12363#4 --TTGGATTTAATTCTGGTATTTGTGACTTAGGGTTCTTCCCCCCAAAAATTAG------ 470
consensus_12363#3 GCCTCGCCAACCTGCAGACACTAGATGTGTCCCAAAATCGG--TTCGAAGGCGGCATTAG 486
* * **
consensus_12363#1 CGTGCGCGTTCCGCTGGTGCTCCCGTTCCACCGCCAT--GGTCCGGAGCCACGCTTCCTC 568
consensus_12363#2 CGTGCGCGTTCCGCTGGTGCTCCCGTTCCACCGCCAT--GGTCCGGAGCCACGCTTCCTC 502
consensus_12363#0 GGAGCGTCGTTGACTGATCACCAACCCCAGCAAACACTAGATGCAGCATACAAATGGCTT 562
consensus_12363#4 GGTTCCTCATTTGGGGATTTTAGGCCG--------ATTGGATCCGGCTTATTGGGGATTC 522
consensus_12363#3 CGCAAACTTCCCAGCAATCTGCCGCAACCTAAGTGCTATCAACTTGTCCAGCAATAACCT 546
* * *
consensus_12363#1 CG-ACGGCGACAGACAGCATGAGGTACCCCCTTTCCGCCCCCGACGATTACGCCAGC--G 625
consensus_12363#2 CG-ACGGCGACAGACAGCATGAGGTACCCCCTTTCCGCCCCCGACGATTACGCCAGC--G 559
consensus_12363#0 AG-CTGAGCACAAGAAGTTATAGGCTGATGGTAGAAGCTAGGAAGGAATCTGAAGGA--G 619
consensus_12363#4 CG-GGAAATTTCAATCTTGTTTATTCCCTTTTGCTTAACAGTGGGGAATTTCAATCT--A 579
consensus_12363#3 GACAGGAAGTATAAGTGGATTGTTCAACAACTGCTTGAAGCTCCAGGATGTTGATCTCAG 606
* * *
consensus_12363#1 ATGCCGCAGCCGAAGTACAC-ATCTCCTTGCGGCCCGGCAGCCCGCGGGTGGCCACGGAC 684
consensus_12363#2 ATGCCGCAGCCGAAGTACAC-ATCTCCTTGCGGCCCGGCAGCCCGCGGGTGGCCACGGAC 618
consensus_12363#0 CTCTGGTTCCTGGCTTGATTGATCTTGCTGCTGCTTCTCCGATCCTCC--GGCCTCTGCT 677
consensus_12363#4 GTTTATCCCCTGTTTTCCCCAATTTACTTCTTAATCCACTGATCTTA-------TATGAT 632
consensus_12363#3 CTGGAACAGCTTCACTGGCAACGTCTGGAATGGAATTGCAAGGCTTAGACAGTTCAAGGC 666
* * * * * *
consensus_12363#1 AAATTCAGGGTGTTCTTGACTGAGCAGTGAGCACCCA-GTCGCCGTTGCTGGGTAGCCAG 743
consensus_12363#2 AAATTCAGGGTGTTCTTGACTGAGCAGTGAGCACCCA-GTCGCCGTTGCTGGGTAGCCAG 677
consensus_12363#0 ATGTTCCT-CGACTCCTGCTCCGGTTGCTATCTCACACATCTCTCTCAATTTCTA--CTG 734
consensus_12363#4 AAGAACCTACGGTTTATGAGTTGGGAACAATGAGAG-------TCTCAAT-------CTG 678
consensus_12363#3 TGGAAAGAACAACTTC---GCTGGGAGCATCTCTTCAAGAACTTTTTCCACGGGGTGCAA 723
* * * *
consensus_12363#1 GAAAATACTCTCAGGTGGTCGTCGTTGCTCACGCCGATGATACGG--AGCTCGCCGCCGC 801
consensus_12363#2 GAAAATACTCTCAGGTGGTCGTCGTTGCTCACGCCGATGATACGG--AGCTCGCCGCCGC 735
consensus_12363#0 ATATATTTTTTCAGTCCTTTATTTC-CAGACCACCAAAGAACAAACTAAAGCTCAGATCG 793
consensus_12363#4 GTTTATCTCATTCGCTCTCCGCTTAGTAAAATTCCAGAGAAAAAA--AAATCTC------ 730
consensus_12363#3 GCTCCAGTTACTAGATCTCT-CCAGTAATCATTTCTATGGCAATT-----TCCCGAGTTC 777
* * * * *
consensus_12363#1 CATCGTCGTCACCGGCGACGACCCTGAACTTGCACTTGCGGGACCACTCCCTCATGTGGT 861
consensus_12363#2 CATCGTCGTCACCGGCGACGACCCTGAACTTGCACTTGCGGGACCACTCCCTCATGTGGT 795
consensus_12363#0 ATCGGTAGCCATGGATGCCGTGGTGAGTGTCTCACATGGGGCACTGGGGCCGCTACTGGG 853
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 AATCGCAAATTGCGCCGGTTTGAC-ATACCTGTCGATATGGGACAATCACTTCAATGGAT 836
consensus_12363#1 CTGGG--AATACGACGATGGAGAACCTCGCCGTGAGCTCGTCAAGGGCTAGGCG-GCTAG 918
consensus_12363#2 CTGGG--AATACGACGATGGAGAACCTCGCCGTGAGCTCGTCAAGGGCTAGGCG-GCTAG 852
consensus_12363#0 CAAGCTCAGTACCTTGCTCGCAGACAAGTACGCGTGCTTGAAAGGTGTCCGCCGTGAGAT 913
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 CT------ATACCACCAGGAATTGGCTCAATCCATGGGCTTGAGGAACTCGTTCTCACGA 890
consensus_12363#1 GAAGGCACCGAGGCTGCCGCGGCGTCTCATCTCCGACGTGGGG-ACGGCGACCATCTGGT 977
consensus_12363#2 GAAGGCACCGAGGCTGCCGCGGCGTCTCATCTCCGACGTGGGG-ACGGCGACCATCTGGT 911
consensus_12363#0 CCATTCCCTAAGATCGGAGCTGAGCAACATGCAAGCGGCGCTCCACAAGTATGCGTCACT 973
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 GCAACCACTTCGATCGTGAGATACCACTTGAGCTGATGAACTGCACCA-GCTCAAGTGGT 949
consensus_12363#1 AGCGCCGCGTAAGTGGCTCGCAGACGATGAGGCCATCAGGGCAGCAGCGGCTGTCGGAGT 1037
consensus_12363#2 AGCGCCGCGTAAGTGGCTCGCAGACGATGAGGCCATCAGGGCAGCAGCGGCTGTCGGAGT 971
consensus_12363#0 CGAGGACCCTGACATCCAGGTGAAGGCCTGGATCACCGAGCTGAGGGAGCTTGCCTATGA 1033
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ATCTCCCTCGTGCCGAATTCAGCACGAGGCGGCGAGCGAGCGAGTGGAATCGGCGGCGAT 1009
consensus_12363#1 C-TCGGCGATCGTCCAGG-------AGGCGGTGTCCGGGACGAAGTCGAGTGAGAGGCGG 1089
consensus_12363#2 C-TCGGCGATCGTCCAGG-------AGGCGGTGTCCGGGACGAAGTCGAGTGAGAGGCGG 1023
consensus_12363#0 CATCGAGGACTGCATAGACAAGTTTATGCACCAACTTGGTGCCAACGGTGAGCAGCACCG 1093
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 C-ATGGCGGCGACGGTGTTCCGGCGAGGTGTAGC-------------------------- 1042
consensus_12363#1 CAGCCGTAGACGAGAACCGGCCTGGAGACGTGGACGAACGCCGCATGGGAGACCGCGCCG 1149
consensus_12363#2 CAGCCGTAGACGAGAACCGGCCTGGAGACGTGGACGAACGCCGCATGGGAGACCGCGCCG 1083
consensus_12363#0 CACCAGTAATAGCATCGAGGACTTCTTTAGGAAGAGTATACAACGTCTCAAAACTCTTGG 1153
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 CCAACGGCGTGGTATTGGCCGACGAGGTCGGGCCCGTGGTGGACACGGAAGCGGCGGAGG 1209
consensus_12363#2 CCAACGGCGTGGTATTGGCCGACGAGGTCGGGCCCGTGGTGGACACGGAAGCGGCGGAGG 1143
consensus_12363#0 CCCGAGGCATAATATTGCTGGCGAGATTGAGGAACTGAAGGCACGAGTTATCTCGGTGAG 1213
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 AAGACACTGCACCGTCGGCGGCATCAACGACGAC----GACGCGGCGCTAGCGCTTGCAG 1265
consensus_12363#2 AAGACACTGCACCGTCGGCGGCATCAACGACGAC----GACGCGGCGCTAGCGCTTGCAG 1199
consensus_12363#0 AGATCAAAAGAACAGCTACAAGCTTGACGATATTTTTTGCAGTAGCTCTAGCAATACCAA 1273
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ACGGACGCGGCGCGGATGAGGCAGGCGGCGGATCGGAGTGGAGGCGCAGCAGGACGAGCT 1325
consensus_12363#2 ACGGACGCGGCGCGGATGAGGCAGGCGGCGGATCGGAGTGGAGGCGCAGCAGGACGAGCT 1259
consensus_12363#0 TGCTTCTGTTGATCCACGGTTGGCTACTCTCTTCGCGGAAGAGAACCATCTTGTCGGTAT 1333
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 CGAGGACTTTGTCGGAGATGTCGTCGACCACCCACGTAGCCAC-GTAGGCCTCGCCGTCG 1384
consensus_12363#2 CGAGGACTTTGTCGGAGATGTCGTCGACCACCCACGTAGCCAC-GTAGGCCTCGCCGTCG 1318
consensus_12363#0 AGATGGCCCAAGGGTTGAACTTGTCAATTGGTTGGATGCAGAGAGCAGGTTGATAAAGTG 1393
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 CCGGCAGCAACAAGACGGTCTTCTTCCTCCGCGCCGCCGTGCTCCGGTTCTTGCAAGTTG 1444
consensus_12363#2 CCGGCAGCAACAAGACGGTCTTCTTCCTCCGCGCCGCCGTGCTCCGGTTCTTGCAAGTTG 1378
consensus_12363#0 TCGCAAGGTATTATCTATTGTGGGGTTTGGAGGTCTTGGGAAGACAACTCTAGCGAATGA 1453
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 -------CGACGGCTCATTCTCGGATCCATTAACCTTGATCTTCTTCTCGCGTTTGTTTA 1497
consensus_12363#2 -------CGACGGCTCATTCTCGGATCCATTAACCTTGATCTTCTTCTCGCGTTTGTTTA 1431
consensus_12363#0 GGTATATCGTAGGGTTAAAGTTCATTTTGACTGCCATGCATTTGTGTCAGTGTCACAAAA 1513
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 TGGCTTGTTATAGAGTATACCATATCGTGCATCATGGTAGTATTTTATACTCACTCCGTT 1557
consensus_12363#2 TGGCTTGTTATAGAGTATACCATATCGTGCATCATGGTAGTATTTTATACTCACTCCGTT 1491
consensus_12363#0 GCCCGATTTCAAGAATATCTTCAAGGATATAACATACAATATGCCTACGAAAGATGGTTT 1573
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 TCAGGTTATAAGACTTTCTAGCATTACCCACGTTCATATGAACTAGGAAGGTAGTCCGCG 1617
consensus_12363#2 TCAGGTTATAAGACTTTCTAGCATTACCCACGTTCATATGAACTAGGAAGGTAGTCCGCG 1551
consensus_12363#0 CCTCAAAGATATTGACACATGGAATGAAAAGAAATTTATTGAAAAGCTAAGAGAACTACT 1633
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 CATTCGCGTGGGCATATATTTTAAGATGTGTTTGAGATATT---TACAGTTATAAGGATG 1674
consensus_12363#2 CATTCGCGTGGGCATATATTTTAAGATGTGTTTGAGATATT---TACAGTTATAAGGATG 1608
consensus_12363#0 TGTGGATAAGAGGTAATTCTCTAGTTCTTTTTTCCCCTCTTCGATAAAGTTGTATACCCA 1693
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 GAATATTAACTGTAGAACACCTCTCATGCTTCAAAAAACAAATCTCCGTATAATTTTTTC 1734
consensus_12363#2 GAATATTAACTGTAGAACACCTCTCATGCTTCAAAAAAC--------------------- 1647
consensus_12363#0 CACTCATGATAATAGAGTGGTTTTTCATTCACAAACTTATATTGTTGATAAACTTTAACT 1753
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 TGTCAGCATAGCGTATAATTTTTCCAACCTAGCTTTATACCATACACTATTTGGTTAATC 1794
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 AGGTATCTTGTTATAATTGATGATGTATGGTCTATTTCGGCATGGAAAGCTATCACGGTT 1813
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 CCAATAAGTAATTATCAATAGTCTTTATCATATAAAA----------------------- 1831
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 GCATTCCCGGATAATGACTGTTCCAGTACAATTATAGTTACTACACGCGTTTCCGATGTT 1873
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 GGATGGTCATGCTGCTTAAATGGCATTGACCGCAATTATCAGATGGAACCTCTAAGTGAA 1933
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 GTTCACTCTGGAAGACTATTTTGCAAGAGAATTTTCAGTACAAATGAGGATGGCTGCCCA 1993
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 GATATTTTACAGGAAGTTTCAACAGATATATTGAAGAAATGTGGCGGTCTTCCATTAGCA 2053
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 ATTATTAGCATATCTGGCTTATTAGCAAATAGACCAGTTATCAAGGAAGAGTGGGAGAAA 2113
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 GTGAAAGAATCGATTGGTTTTGCATTGGACAAGAACCAAAATCTAGAAGGAATGAAAATC 2173
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 ATACTGTCCCTTAGCTTTAATAACCTTCCAAACTATCTCAAGACTTGTTTGCTATATTTG 2233
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 AGCATATTTCCAGAGGATTGTATTATTGAAAGAAACATGGTAGTATGGCGATGGATAGCT 2293
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 GAAGGCTTTATCTCTGAAGACTGTGGGCAGAAATTGGAAGATGTTGCGGAGAGCTACTTT 2353
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 TATGAGCTCATCAACAAAAGTCTGGTTCAACCTGTGGACATTGGTTTTGATGGTAAGGCT 2413
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 CGTGCATGCCGTGTCCATGATATAATGCTTCAATTTATCTCCTCAAAAGCAACAGAAGAG 2473
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 AATTTTGTTACATTATTAGGTGGCCAAACTAGAAAAACGAATTCGCATCATTATGTTCGG 2533
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 CGATTATCCATTCAGGACACTAATAATCATTTGTCAACTCTGTTAGCAAACAAAAATTTA 2593
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 TGCCATGTTCGAACCCTACACTGCTTTGGTGGGAACATAATTTTTTTGCCCCAGCTTTCC 2653
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 CGGTTTGAGATTCTACGAGTATTGGATTTTCATGGCTGTCGAGGTTTAGAGCAGTATTTG 2713
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 GAAAATATAGACAAGCTATTCCAGCTTGAGTACTTAAGCCTTTGTTGTTCAGACATATCA 2773
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 CGTATACCAACACAAATTGCAAAGCTCCAAAATTTGGTGACGCTGGACCTTCGCCAAACA 2833
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 TGCGTAGAAGAGTTTCCCACTGAATTTTGCCGATTGATAAAGCTACAACATCTTCTCAGA 2893
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 GATCGGATGTTGAAGCTACCGGATGGAATTGGGAATATGAGGAATCTACAGGTGCTATCA 2953
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 GGCATTAATATAAGCAGTAGCTCAGCGAGCGCAGTGGCAGAACTTGGTGAGCTGACCAGT 3013
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ------------------------------------------------------------
consensus_12363#2 ------------------------------------------------------------
consensus_12363#0 TTGAGGGACCTCAAAATATGTTTGTTTGATGAACTCAGTAAGTGCAAGACAAAAGAAGAG 3073
consensus_12363#4 ------------------------------------------------------------
consensus_12363#3 ------------------------------------------------------------
consensus_12363#1 ---------------------------
consensus_12363#2 ---------------------------
consensus_12363#0 ATGTTACTGGCCTCACTTTGCAAACTA 3100
consensus_12363#4 ---------------------------
consensus_12363#3 ---------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||