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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12408#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1768 fasta sequence
[AGAGAAGAGAAGAGAAGCGCGCAGTGTCCAGACGCAACCGATCAGTCTCGCTTCTCGCCTCGTCTGGTCTCCTTCCTCCGACGCGCGGAACCTTCTAGAAGCTTCTCCCTCCGGTCGGGGGATGCCGCGCTGACCCCCTACCGTGGTTATGCTGGCGTCAAAGCTCTGGTCGAGGCTCGCGTCGCCGTCTTCCCCCGCCTCGCCGCGCGCCCTTTCTTCTTCTTCATCGGCGGCGGCGGCGGCGAGGTACCTACTGCCGAGCTCTGGGATGCCGGCCCAAGAAAGGTCGCCGGGTCACCCCAGTGGCGGCGACGCGCGGCCCGGTGCGGGGCTCGGGCTCGCCGAGACTGGGTGTGGCGCGGCCGGTGCGCCGCGACCGCTGCCGCTGCCGTGCTCTTCTTCGTCGGACAATCCCGCGGAAGAGAATCCTTGCACAAGACAGATATACCAAAGACAGCTAATGCCGCATCGGTTCAAGTTATTTTTGGGGGAGAAACGTCATTTTACATATGCAAATGGTGCTTCACTGAATCCGCAGAACTACAGATATTTTTCATCTTCTTCTGGCCAACAGAGTATAGGAATTGGTAACAAGATTATACATGACCTTCCAAGAAGTGTGAAAATTGTGGAAGTTGGGCCACGAGATGGGCTACAGAATGAGAAGAACATAGTTCCAACACATGTAAAGATTGAACTCATACAGAGACTGGCAACCTCTGGATTATCGGTTGTTGAGGCAACTAGTTTTGTCTCTCCAAAATGGGTACCACAGCTAGCTGATGCTAAGGATGTGATGGATGTAGTCCGGAATATTGAAGGTGTAAGCCTTCCTGTATTGACACCAAACCTTAAGGGATTTGAGGCAGCTGTTGCAGCAGGTGCAAAAGAAGTTGCAGTATTTGCGTCAGCTTCTGAAGCATTTTCCAAGTCAAACATAAACTGTACCATTAAAGAGAGCCTTGCTCGCTATAAAGATGTTGCTCTTGCAGCAAAAGAGCTAAAAATCCCCATGCGAGGGTATGTTTCTTGTGTGGTTGGATGCCCAGTAGAAGGATATGTGCCACCGTCAAATGTAGCTCATGTGGCTAAAGAGCTTTATGACATGGGCTGCTACGAGGTTTCACTTGGTGATACAATAGGCGTTGGTACCCCAGGCACCGTTGTTCCAATGCTTGAGGCTGTTATGTTCTTTGTTCCAAAGGAGAAGCTTGCTGTCCATTTCCACGATACCTACGGCCAATCGCTTTCAAATATCCTCATCTCTCTCCAGATGGGTGTGAGCGTTGTGGACTCTTCCGTAGCGGGCCTCGGA-GGGTGCCCATACGCGAAAGGTGCATC-GGGCA-ATGTGGCGACGGAGG-ACGT-GGTGTACAT-GCTGAACGGG-C-TGGGGATCAGCACCAATGTCGACCTGGGCA-AGGTGATGGCCGCCGGCGAGTTCATC-TGCAACCA-TCTGGGGCGCCAGTCTGGGTCCA-AGGCAGCTAT-CGCTTTGGGAA-GCA-AGG-TTGCTACTGCC--AACGC--AT--CCA-AACTGTGAGG-TTCACTAACA-TTCA-CTGATG-CA-GTCTTTCGGAGGATG-CGTTTC-AGACATAC-AAATGTATACGATA-AATAAAG-GCGAAATTGGTTCCA-TGCTATTCAAGTGACCTGGGATTTGTCGGTGCTAGAAAACTAAAATCGGGATCG-TTGGGTGATGTAAGATCAATTTTG-CCAGAAATAAATGGACTGATGGGATTGTTGATTGA-AAAAAAAAAACAACTTTTCCTGAAAAAA--AAAAAAAAAA]
[+] EMBL AK068875 [AGAGAAGAGAAGAGAAGCGCGCAGTGTCCAGACGCAACCGATCAGTCTCGCTTCTCGCCTCGTCTGGTCTCCTTCCTCCGACGCGCGGAACCTTCTAGAAGCTTCTCCCTCCGGTCGGGGGATGCCGCGCTGACCCCCTACCGTGGTTATGCTGGCGTCAAAGCTCTGGTCGAGGCTCGCGTCGCCGTCTTCCCCCGCCTCGCCGCGCGCCCTTTCTTCTTCTTCATCGGCGGCGGCGGCGGCGAGGTACCTACTGCCGAGCTCTGGGATGCCGGCCCAAGAAAGGTCGCCGGGTCACCCCAGTGGCGGCGACGCGCGGCCCGGTGCGGGGCTCGGGCTCGCCGAGACTGGGTGTGGCGCGGCCGGTGCGCCGCGACCGCTGCCGCTGCCGTGCTCTTCTTCGTCGGACAATCCCGCGGAAGAGAATCCTTGCACAAGACAGATATACCAAAGACAGCTAATGCCGCATCGGTTCAAGTTATTTTTGGGGGAGAAACGTCATTTTACATATGCAAATGGTGCTTCACTGAATCCGCAGAACTACAGATATTTTTCATCTTCTTCTGGCCAACAGAGTATAGGAATTGGTAACAAGATTATACATGACCTTCCAAGAAGTGTGAAAATTGTGGAAGTTGGGCCACGAGATGGGCTACAGAATGAGAAGAACATAGTTCCAACACATGTAAAGATTGAACTCATACAGAGACTGGCAACCTCTGGATTATCGGTTGTTGAGGCAACTAGTTTTGTCTCTCCAAAATGGGTACCACAGCTAGCTGATGCTAAGGATGTGATGGATGTAGTCCGGAATATTGAAGGTGTAAGCCTTCCTGTATTGACACCAAACCTTAAGGGATTTGAGGCAGCTGTTGCAGCAGGTGCAAAAGAAGTTGCAGTATTTGCGTCAGCTTCTGAAGCATTTTCCAAGTCAAACATAAACTGTACCATTAAAGAGAGCCTTGCTCGCTATAAAGATGTTGCTCTTGCAGCAAAAGAGCTAAAAATCCCCATGCGAGGGTATGTTTCTTGTGTGGTTGGATGCCCAGTAGAAGGATATGTGCCACCGTCAAATGTAGCTCATGTGGCTAAAGAGCTTTATGACATGGGCTGCTACGAGGTTTCACTTGGTGATACAATAGGCGTTGGTACCCCAGGCACCGTTGTTCCAATGCTTGAGGCTGTTATGTTCTTTGTTCCAAAGGAGAAGCTTGCTGTCCATTTCCACGATACCTACGGCCAATCGCTTTCAAATATCCTCATCTCTCTCCAGATGGGTGTGAGCGTTGTGGACTCTTCCGTAGCGGGCCTCGGA GGGTGCCCATACGCGAAAGGTGCATC GGGCA ATGTGGCGACGGAGT ACGT GGTGTACAT GCTGAACGGG C TGGGGATCAGCACCAATGTCGACCTGGGCA AGGTGATGGCCGCCGGCGAGTTCATC TGCAACCA TCTGGGGCGCCAGTCTGGGTCCA AGGCAGCTAT CGCTTTGGGAA GCA AGG TTGCTACTGCC AACGC AT CCA AACTGTGAGG TTCACTAACA TTCA CTGATG CA GTCTTTCGGAGGATG CGTTTC AGACATAC AAATGTATACGATA AATAAAG GCGAAATTGGTTCCA TGCTATTCAAGTGACCTGGGATTTGTCGGTGCTAGAAAACTAAAATCGGGATCG TTGGGTGATGTAAGATCAATTTTG CCAGAAATAAATGGACTGATGGGA ]
[+] EMBL CB642290 [ gTCGCTTCTCGCCTCGTGTCGTCTCCTTCCTCCGACGCGCGGAAGCTTCTAGAAGCTTCTCCCTCCGGGCGGGGGATGCCGCGCTGACCCCCTACCGTGGTTATGCTGGCGTCCAAGCTCTGGTCGAGGCTCGCGTCGGCGTCTTCCCCCGCCTCGCCGCGCGCCCTTTCTTCTTCTTCATCGGCGGCGGCGGCGGCGAGGTACCTACTGCCGAGCTCTGGGATGCCGGCCCAAGAAAGGTCGCCGGGTCACCCCAGTGGCGGCGACGCGCGGCCCGGTGCGGGGCTCGGGCTCGCCGAGACTGGGTGTGGCGCGGCCGGTGCGCCGCGACCGCTGCCGCTGCCGTGCTCTTCTTCGTCGGGCGATCCCGC AGAATCCTTGCTCAAGAGAGATATACCAAAGACAGCTAGTGCCGCATCGGTTCAAGTTATTTTTGGGGGAGAGACGTCATTTTACATATGCAAATGGTGCTTCACTGAATCCGCACAACTACAGATATTTTTCATCTTCTTCTGGCCAACAGAGTATGGGAATTGGTAACAATATTATACATGACCTTCCAAGAAGTGTGAATATTGTGGAAGTTGGGCCACGAGATGGGCTACAGAATGAGAAGAACATAGGTCCAACACGTGGAAAGATTGAACTCATACAGAGACTGGCAACCTCTGGATTATCGGATGTTGAGGCAACTAGTTTTGTCTCTCCAAGATGGGTACC ]
[+] EMBL C97133 [ aGGTATGTNTNTTGTGTGGTTGGATGCCCAGTAGAAGGATATGTGCCACCGTCAAATGTAGCTCATGTGGCTAAAGAGCTTTATGACATGGGCTGCTACGAGGTTTCACTTGGTGATACAATAGGCGTTGGTACCCCAGGCACCGTTNTTCCAATGCTTGAGGCTGTTATGTTCTTTGTTCCAAAGGAGAAGCTTGCTGTCCATTTCCACGATACCTACGGCCAATCGCTTTCAAATATCCTCATCTCTCTCCAGATGGGTGTGAGCATTGTGGACTCTTCCGTAGCGGGCNTCGGAGGGGTGCCCATACGCGAAANGTGCATCGGGGCA ATGTNGCCACGGAGG ACGTGGGTGTACAT GCTGAACGGG CTTGGGGATCAGACCCAATTTCGACC ]
[-] EMBL CB642291 [ TGTAGCTCATGTGGCTAAAGAGCTTTATGTCATGGCCTGCTACGAGGTTTCTCCTGGTGATACAATAGGCGTTGGTACCCCAGGCACCGTTGTTCCAATGCTTGAGGCTGTTATGTTCTTTGTTCCAAAGGAGAAGCTTGCTGTCCATTTCCACGATACCTACGGCCAATCGCTTTCAAATATCCTCATCTCTCTCCACATGGGTGTGAGCGTTGTGGACTCTTCCGTAGCGGGCCTCGGA GGGTGCCCATCCGCGAAAGGTGCATC GGGCA ATGTGGCGACGGAGG CCCT GGTGTACAT GCTGACCGGG C TGGGGATCAGCACCAATGTGGACCTGGGCA AGGTGATGGCCGCCGGGGAGTTCATT TGCAACCA TTTGGGGCGCCAGTGTGGGTCCA AGGCAGCTAT CGCTTTGGGAA GCA AGG TTGCTCCTGCC AACGC AT CCA ATCTGTGAGG TTCACTAACA TTCA CTGACG CA GTCTTTCGGAGGATG CGTTTC AGACATAC ACATGTATACGATA AATAAAG GCGAAATTGGTTCCA TGCTATTCAAGTGGCCTGGGATTCGTCGGTGCTAGAAATCTAAAATCGGGATCG TTGGGTGATGTAACATC ]
[+] EMBL BI808823 [ CGCGAAAGGTGCATC GGGCACATTTGGCGACGGAGGTAC T GGTGTACATGGCTGAACGGGTC TGGGGATCAGCACCCATGTCGACCTGGGCA AGGTGATGGCCGCCGGCGAGTTCATCGTGCAACCACTCTGGGGCCCCA TCTGGGTCCACAGGCAGCTATCCGCTTTGGGAACACACAGG TTGCTACTGCC AGCGC AT CC AACTGTGAGG TTCACTGACACTTCAGCTGATG CA GTCTTTCGGAGGATG CGTTTC AGACATAC CAATGTATACGATA AATAAAG GCGAAATTGGTTCCACTGCTATTCGAGTGACCTGGGATTTGTCGGTGCTAGAAAACTAAAATCGGGATCGCTTGGGTGATGTAAGATCCATTTTGCCCAGAAATAAATGGACTGATGGGATTGTTGATTGA AAAAAAAAA ]
[+] EMBL AU173159 [ GGTGCATC GGGCA ATGTGGCGACGGAGG ACGT GGTGTACAT GCTGAACGGG C TGGGGATCAGCACCAATGTCGACCTGGGCA AGGTGATGGCCGCCGGCGAGTTCATC TGCAACCA TNTGGGGCGCCAGTNTGGGTCCA AGGCAGCTAT CGCTTTGGGAA GCA AGG TTGCTACTGCC AACGC AT CCA AACTGTGAGG TTCACTAACA TTCN CTGATG CA GTCTTTCGGAGGATG CGTTTC AGACATAC AAATGTATNCGATA AATAAAG GCGAAATTGGTTCCA TGCTATTCAAGTGACCTGGGATTTGTCGGTGCTAGAAAACTAAAATCGGGATCG TTGGGTGATGTAAGATCAATTTTG CCAGAAATAAATGGACTGATGGGATTGTTGATTGA TATATATGGTCAGCTTTTCCTGAAAAAA AAAAA ]
[+] EMBL C97134 [ TGCACC GGCCA ATTTGCCGACGNAGG ACTT GTTTTACAT GCTGAACGGG C TGGGGATCAGCACCAATGTCGACCTGGGCA AGTTGATGGCCGCCGGCGAGTTCATC TGCAACCA TCTGGGGCGCCAGTCTGGGTCCA AGGCA CTAT CGCTTTGGGAA GCA AGG TTGCTACTGCC AACGC AT CCA AACTGTGAGG TTCACTAACA TTCA CTGATG CA GTCTTTCGGAGGATG CGTTTC AGACATAC AAATGTATACGATA AATAAAG GCGAAATTGGTTCCA TGCTATTCAAGTGACCTGGGATTTGTCGGTGCTAGAAAACTAAAATCGGGATCG TTGGGTGATGTAAGATCAATTTTG CCAGAAATAAATGGACTGATGGGATTGTTGATTGA TAAAAAAAAAAAAa ]
[+] EMBL BI808785 [ GGAGG ACGT GGTGTACAT CTGAACGGG C TGGGGATCAGCACCCATGTCGACCTGGGCACAGGTGATGGCCCCCGGCGAGTTCATC TGCCACCACTCTGGGGCCCCA TCTGGGTCCC AGGCAGCTAT CGCTTTGGGAA GCC AGG TTGCTACTGCC CACGC AT CCC AACTGTGAGG TTCACTAACA TTCA CTGATG CC GTCTTTCGGAGGATG CGTTTC AGACATAC CAATGTATACGATA AATAAAG GCGAAATTGGTTCCC TGCTATTCGAGTGACCTGGGATTTGTCGGTGCTAGAAAACTAAAATCGGGATCG TTGGGTGATGTAAGATCCATTTTGCCCAGAAATAAATGGACTGATGGGATTGTTGATTGA AAAAAAAAA ]
[+] EMBL BM038159 [ GGCA AGGTGAT GCCGCCGGCGAGTTCATC TGCAACCA TCTGGGGCGCCAGTCTGGGTCCA AGCCAGCTAT CGCTTTGGGAA GCA AGGTTTGCTACTGCCCAAACGCCAATCCCCA AACTGTGAGGTTTCACTAACATTTCA CTGATGCCANGTCTTTCGGAGGATGCCGTTTCAAGACATAC AAATGTATACGATA AATAAAG CCGAAATTGGTTCCA TGCTATTCGAGTGACCTGGGATTTGTCGGTGCTAGAAAACTAAAATCGGGATCG TTGGGTGATGTAAGATC ATTTTG CCAGAAATAAATGGACTGATGGGATTGTTGATTGA TATAAAAAAAAAAa ]
[+] EMBL BQ906376 [ CA AGGCAGCTAT CGCTTTGGGAA GCA AGG TTGCTACTGCC ACGC AT CCACAACTGTGAGG TTCACTAACA TTCA CTGATG CA GTCTTTCGGAGGATG CGTTTC AGACATACAAAATGTATACGATANCATAAAGCCCGAAATTGGTTCCA TGCTATTCGAGTGACCTGGGATTTGTCGGTGCTAGAAAACTAAAATCGGGATCG TTGGGTGATGTAAGATCAATTTTG CCAGAAATAAATGGACTGATGGGATTGTTGATTGATAAAAAAAAAACACC CCCCCAAAAAACCAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||