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Oryza sativa
cluster # 12426 cluster # 12426       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12426#0 length = 1496 sequences # 9  
consensus_12426#1 length = 783 sequences # 1  

consensusID : consensus_12426#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1496
fasta sequence
                              [CACGCCTTCTTCCCCAACGACCAAACCAAAGTTTGGGTGAAGAAAAAAAAATATCGCCGCGTTTTTATCCCCCACGAGACGAGTCGAGACGACCAAAGCCTAACTAATCGGGGGCAAGACGAGGAGGAGAGCGGATTCTCGTCGGCTTCGGCGACCGGAAGAGGAGAGGAGACCGACCCCGCGCCGTGTTCCGCCGCCGCCGCCGCCGCCGACGACGACGACGGCAAGTAGGAATTTGATTCTCCTGGGGAATTAACTTGTTAGGAGAAAAGGAATTTGGGATGGGCGACCATGTGGTGGTGAATGTGGAAGGCTTGGGAAACGATGGAGGGGCTGTGGAGAAGCCATCTGAGGCCGTGAACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTCGAGGAGGGCGGTGGAGAGGAGGAGCCGCTCATCCAGGCGGCGGAGTGCCGTATATGCCAGGAGGAGGATAGCATCAAGAACCTCGAGAAGCCTTGTGCTTGCAGTGGCAGCCTCAAGTATGCTCATAGAGCTTGTGTGCAACGCTGGTGCAATGAGAAAGGAGACATTACATGTGAAATCTGTCATGAGCAATATAAGCATGGATACACAGCTCCACCTCGTGTTGAACCAGACGATACCATCATAGATATCGGT-GGTGATTGGGCACGTGACCCAAGAATTATTGCTGTAGCGGCTGCACAACGTCGTCTTCTTGAAACTGAGTATGATGAATATGCTGGTACTGATGCTAGTGGTGCTGCATTCTGCCGTTCTGCTGCACTTATACTAATGGCCTTGTTGCTATTGAGGCATGCTTTGTCTATCTCAGACAATGAAGGAGATGATGATGCTTCTACCATGTTCTCGCTCTTTCTACTTCGAGCTGCTGGATTTCTGCTGCCATGCTATATCATGGCTTGGATATTCAGTATTTTGCATCGCCGGCGACAAAGACAGGAAGCGGCTGCAATTGCTGCAGCAGAGGTGGCATTCATCCTGCAATCAGCCCAAGGCCATGCCCTTCAGTTCACCATCGCTCCAGACTCCCCCGCCACTCCACAGCATGAGCCACAGCAGCAGCAGCCGCAGCCGCAGCCGCAGCAATAGCTAGTTACTTCAGTAGCGTCTCTCAACTACTGACTCGCACATGCAGAAGAAGAGGATACCTCAGCTAGTGGCCGCTTTGTTGTTTCCTGTTGCAACTGGCCCAGGGACGCTAAGAACCTGGCCTCGCCTTGTGTGGCCGGGTAGAAACCTTGTAAAACGCCAGAGATTCATTTGTTGCAAGCGACCGCAGCTTAAGCCCCGCTACCCTTCGATTTGTCTCTGTGTAACTCAAGCATTGATTTATTGTAAATTTGTCGTCTGTTGGAGTCCATTTTTTTAGTTCCTTTGCCAAGTGTTTTACTGCCATGTACAGTATTATTACATGGGAGCTTTTATCTTTCAAAGAATTAATCTGAGTGAGTGTGAAAAAAAAAAAAA]

[+] EMBL AK071098             [CACGCCTTCTTCCCCAACGACCAAACCAAAGTTTGGGTGAAGAAAAAAAAATATCGCCGCGTTTTTATCCCCCACGAGACGAGTCGAGACGACCAAAGCCTAACTAATCGGGGGCAAGACGAGGAGGAGAGCGGATTCTCGTCGGCTTCGGCGACCGGAAGAGGAGAGGAGACCGACCCCGCGCCGTGTTCCGCCGCCGCCGCCGCCGCCGACGACGACGACGGCAAGTAGGAATTTGATTCTCCTGGGGAATTAACTTGTTAGGAGAAAAGGAATTTGGGATGGGCGACCATGTGGTGGTGAATGTGGAAGGCTTGGGAAACGATGGAGGGGCTGTGGAGAAGCCATCTGAGGCCGTGAACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTCGAGGAGGGCGGTGGAGAGGAGGAGCCGCTCATCCAGGCGGCGGAGTGCCGTATATGCCAGGAGGAGGATAGCATCAAGAACCTCGAGAAGCCTTGTGCTTGCAGTGGCAGCCTCAAGTATGCTCATAGAGCTTGTGTGCAACGCTGGTGCAATGAGAAAGGAGACATTACATGTGAAATCTGTCATGAGCAATATAAGCATGGATACACAGCTCCACCTCGTGTTGAACCAGACGATACCATCATAGATATCGGT GGTGATTGGGCACGTGACCCAAGAATTATTGCTGTAGCGGCTGCACAACGTCGTCTTCTTGAAACTGAGTATGATGAATATGCTGGTACTGATGCTAGTGGTGCTGCATTCTGCCGTTCTGCTGCACTTATACTAATGGCCTTGTTGCTATTGAGGCATGCTTTGTCTATCTCAGACAATGAAGGAGATGATGATGCTTCTACCATGTTCTCGCTCTTTCTACTTCGAGCTGCTGGATTTCTGCTGCCATGCTATATCATGGCTTGGATATTCAGTATTTTGCATCGCCGGCGACAAAGACAGGAAGCGGCTGCAATTGCTGCAGCAGAGGTGGCATTCATCCTGCAATCAGCCCAAGGCCATGCCCTTCAGTTCACCATCGCTCCAGACTCCCCCGCCACTCCACAGCATGAGCCACAGCAGCAGCAGCCGCAGCCGCAGCCGCAGCAATAGCTAGTTACTTCAGTAGCGTCTCTCAACTACTGACTCGCACATGCAGAAGAAGAGGATACCTCAGCTAGTGGCCGCTTTGTTGTTTCCTGTTGCAACTGGCCCAGGGACGCTAAGAACCTGGCCTCGCCTTGTGTGGCCGGGTAGAAACCTTGTAAAACGCCAGAGATTCATTTGTTGCAAGCGACCGCAGCTTAAGCCCCGCTACCCTTCGATTTGTCTCTGTGTAACTCAAGCATTGATTTATTGTAAATTTGTCGTCTGTTGGAGTCCATTTTTTTAGTTCCTTTGCCAAGTGTTTTACTGCCATGTACAGTATTATTACATGGGAGCTTTTATCTTTCAAAGAATTAATCTGAGTGAGTGTGAAA          ]
[+] EMBL CF311088             [                                                                                                    TAACTAATCGGGGGCAAGACGAGGAGGAGAGCGGATTCTCGTCGGCTTCGGCGACCGGAAGAGGAGAGGAGACCAACCCCGCGCCGTGTTCCGCCGCCGCCGCCGCCGCCGACGACGACGACGGCAAGTAGGAATTTGATTCTCCTGGGGAATTAACTTGTTAGGAGGAAAGGAATTTGGGATGGGCGACCATGTGGTGGTGAATGTGGAAGGCTTGGGAAACGATGGAGGGGCTGTGGAGAAGCCATCTGAGGCCGTGAACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTTGAGGAGGGCGGTGGAGAGGAGGAGCCGCTCATCCAGGCAGCGGAGTGCCGTATATGCCAGGAGGAGGATAGCATCAAGAACCTCGAGAAGCCTTGTGCTTGCAGTGGCAGCCTCAAGTATGCTCATAGAGCTTGTGTGCAACGCTGGTGCAATGAGAAAGGAGACATTACATGTGAAATCTGTCATGAGCAATATAAGCATGGATACACAGCTCCACCTCGTGTTGAACCAGACGATACCATCATAGATATCGGTGGGTGATTGGGCACGTGACCCAAGAATTATTGCTGTAGCGGCTGCACAACGTCGTCTTCTTG AACTGAGTACGATGAATATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK061258             [                                                                                                      ACTAATCGGGGGCAAGACGAGGAGGAGAGCGGATTCTCGTCGGCTTCGGCGACCGGAAGAGGAGAGGAGACCGACCCCGCGCCGTGTTCCGCCGCCGCCGCCGCCGCCGACGACGACGACGGCAAGTAGGAATTTGATTCTCCTGGGGAATTAACTTGTTAGGAGAAAAGGAATTTGGGATGGGCGACCATGTGGTGGTGAATGTGGAAGGCTTGGGAAACGATGGAGGGGCTGTGGAGAAGCCATCTGAGGCCGTGAACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTCGAGGAGGGCGGTGGAGAGGAGGAGCCGCTCATCCAGGCGGCGGAGTGCCGTATATGCCAGGAGGAGGATAGCATCAAGAACCTCGAGAAGCCTTGTGCTTGCAGTGGCAGCCTCAAGTATGCTCATAGAGCTTGTGTGCAACGCTGGTGCAATGAGAAAGGAGACATTACATGTGAAATCTGTCATGAGCAATATAAGCATGGATACACAGCTCCACCTCGTGTTGAACCAGACGATACCATCATAGATATCGGT GGTGATTGGGCACGTGACCCAAGAATTATTGCTGTAGCGGCTGCACAACGTCGTCTTCTTGAAACTGAGTATGATGAATATGCTGGTACTGATGCTAGTGGTGCTGCATTCTGCCGTTCTGCTGCACTTATACTAATGGCCTTGTTGCTATTGAGGCATGCTTTGTCTATCTCAGACAATGAAGGAGATGATGATGCTTCTACCATGTTCTCGCTCTTTCTACTTCGAGCTGCTGGATTTCTGCTGCCATGCTATATCATGGCTTGGATATTCAGTATTTTGCATCGCCGGCGACAAAGACAGGAAGCGGCTGCAATTGCTGCAGCAGAGGTGGCATTCATCCTGCAATCAGCCCAAGGCCATGCCCTTCAGTTCACCATCGCTCCAGACTCCCCCGCCACTCCACAGCATGAGCCACAGCAGCAGCAGCCGCAGCCGCAGCCGCAGCAATAGCTAGTTACTTCAGTAGCGTCTCTCAACTACTGACTCGCACATGCAGAAGAAGAGGATACCTCAGCTAGTGGCCGCTTTGTTGTTTCCTGTTGCAACTGGCCCAGGGACGCTAAGAACCTGGCCTCGCCTTGTGTGGCCGGGTAGAAACCTTGTAAAACGCCAGAGATTCATTTGTTGCAAGCGACCGCAGCTTAAGCCCCGCTACCCTTCGATTTGTCTCTGTGTAACTCAAGCATTGATTTATTGTAAATTTGTCGTCTGTTGGAGTCCATTTTTTTAGTTCCTTTGCCAAGTGTTTTACTGCCATGTACAGTATTATTACATGGGAGCTTTTATCTTTCAAAGAATTAATCTG                       ]
[+] EMBL OSR32531A            [                                                                                                                     GACGAGGAGGAGAGCGGATTCTCGTCGGCTTCGGCGACCGGAAGAGGAGAGGAGACCGACCCCGCGCCGTGTTCCGCCGCCGCCGCCGCCGCCGACGACGACGACGGCAA    GAATTTGATTCTCCTGGGGAATTAACTTGTTAGGAGAAAAGGAATTTGGGATGGGCGACCATGTNGTGGTGAATGTNGAAGGCTTGGGAAACGATGGAGGGGCTGTNGAGAAGCCATCTGAGGCCGTGAACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTCGANGAGGGCGGTGGAGATGAGGAGCCNCTNATCCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF276147             [                                                                                                                                            GTCGGCTTCGGCGACCGGAAGAGGAGAGGAGACCAACCCCGCGCCGTGTTCCGCCGCCGCCGCCGCCGCCGACGACGACGACGGCAAGTAGGAATTTGATTCTCCTGGGGAATTAACTTGTTAGGAGAAAAGGAATTTGGGATGGGCGACCATGTGGTGGTGAATGTGGAAGGCTTGGGAAACGATGGAGGGGCTGTGGAGAAGCCATCTGAGGCCGTGAACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTTGAGGAGGGCGGTGGAGAGGAGGAGCCGCTCATCCAGGCAGCGGAGTGCTGTATATGCCAGGAGGAGGATAGCATCAAGAACCTCGAGAAGCCTTGTGCTTGCAGTGGCAGCCTCAAGTATGCTCATAGAGCTTGTGTGCAACGCTGGTGCAATGAGAAAGGAGACATTACATGTGAAATCTGTCATGAGCAATATAAGCATGGATACACAGCTCCACCTCGTGTTGAACCAGACGATACCATCATAGATATCGGTGGGTGATTGGGCACGTGACCCAAGAATTATTGCTGTAGCGGCTGCACAACGTCGTCTTCTTGAAACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSR24581A            [                                                                                                                                                                                                                                                                                                      TGGTGGTGAATGTGGAAGGCTTGGGAAACGATGGAGGGGCTGTGGAGAAGCCATCTGAGGCCGTGAACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTCGAGGAGGGCGGTGGAGAGGAGGAGCCGCTCATCCAGGCGGCGGAGTGCCGTATATGCCAGGAGGAGGATAGCATCAAGAACCTCGAGAAGCCTTGTGCTTGCAGTGGCAGCCTCAAGTATGCTCATAGAGCTTGTGTGCAACGCTGGTGCAATGAGAAAGGAGACATTACATGTGAAATCTGTCATGAGCAATATAAGCATGGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA753832             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGCAATGAGAAAGGAGACATTACATGTGAAATCTGTCATGAGCA  ATAAGCATGGATACACAGCTCCACCTCGTGTTGAACCAGACGATACCATCATAGATATCGGT GGTGATTGGGCACGTGACCCAAGAATTATTGCTGTAGCGGCTGCACAACGTCGTCTTCTTGAAACTGAGTATGATGAATATGCTGGTACTGATGCTAGTGGTGCTGCATTCTGCCGTTCTGCTGCACTTATACTAATGGCCTTGTTGCTATTGAGGCATGCTTTGTCTATCTCAGACAATGAAGGAGATGATGATGCTTCTACCATGTTCTCGCTCTTTCTACTTCGAGCTGCTGGATTTCTGCTGCCATGCTATATCATGGCTTGGATATTCAGTATTTTGCATCGCCGGCGACAAAGACAGGAAGCGGCTGCAATTGCTGCAGCAGAGGTGGCATTCATCCTGCAATCAGCCCAAGGCCATGCCCTTCAGTTCACCATCGCTCCAGACTCCCCCGCCACTCCACAGCATGAGCCACAGCAGCAGCAGCCGCAGCCGCAGCCGCAGCAATAGCTAGTTACTTCAGTAGCGTCTCTCAACTACTGACTCGCACATG                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU173470             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGNTAGTGGCCGCTTTGTTGTTTCCTGTTGCAACTGGNCCAGGGACGCTAANAACCTGGCCTNGCCTTGTGTGGCCGGGTANAAACCTTGTAAAACGCCANAGATTCATTTGTTGCAANCGNCCGCAGCTTAAGCCCCGCTACCCTTNGATTTGTNTNTGTGTAACTCAAGCATTGATTTATTGTAAATTTGTCGTCTGTTGGAGTCCATTTTTTTAGTTCCTTTGCCAAGTGTTTTNCTGCCATGNACAGTATTATTACATGGGAGCTTTTATNTTTCAAANAATTAAT T   TGAGTGNAAAAAAAAAAAAAA]
[+] EMBL OSR02351A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCCTGTTGCAACTGGCCCAGGGACGCTAAGAACCTGGCCTCGCCTTGTGTGGCCGGGTAGAAACCTTGTAAAACGCCAGAGATTCATTTGTTGCAAGCGACCGCAGCTTAAGCCCCGCTACCCTTCGATTTGTCTCTGTGTAACTCAAGCATTGATTTATTGTAAATTTGTCGTCT                                                                                                                      ]


>consensus_12426#0 CACGCCTTCTTCCCCAACGACCAAACCAAAGTTTGGGTGAAGAAAAAAAAATATCGCCGC GTTTTTATCCCCCACGAGACGAGTCGAGACGACCAAAGCCTAACTAATCGGGGGCAAGAC GAGGAGGAGAGCGGATTCTCGTCGGCTTCGGCGACCGGAAGAGGAGAGGAGACCGACCCC GCGCCGTGTTCCGCCGCCGCCGCCGCCGCCGACGACGACGACGGCAAGTAGGAATTTGAT TCTCCTGGGGAATTAACTTGTTAGGAGAAAAGGAATTTGGGATGGGCGACCATGTGGTGG TGAATGTGGAAGGCTTGGGAAACGATGGAGGGGCTGTGGAGAAGCCATCTGAGGCCGTGA ACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTCGAGGAGGGCG GTGGAGAGGAGGAGCCGCTCATCCAGGCGGCGGAGTGCCGTATATGCCAGGAGGAGGATA GCATCAAGAACCTCGAGAAGCCTTGTGCTTGCAGTGGCAGCCTCAAGTATGCTCATAGAG CTTGTGTGCAACGCTGGTGCAATGAGAAAGGAGACATTACATGTGAAATCTGTCATGAGC AATATAAGCATGGATACACAGCTCCACCTCGTGTTGAACCAGACGATACCATCATAGATA TCGGTGGTGATTGGGCACGTGACCCAAGAATTATTGCTGTAGCGGCTGCACAACGTCGTC TTCTTGAAACTGAGTATGATGAATATGCTGGTACTGATGCTAGTGGTGCTGCATTCTGCC GTTCTGCTGCACTTATACTAATGGCCTTGTTGCTATTGAGGCATGCTTTGTCTATCTCAG ACAATGAAGGAGATGATGATGCTTCTACCATGTTCTCGCTCTTTCTACTTCGAGCTGCTG GATTTCTGCTGCCATGCTATATCATGGCTTGGATATTCAGTATTTTGCATCGCCGGCGAC AAAGACAGGAAGCGGCTGCAATTGCTGCAGCAGAGGTGGCATTCATCCTGCAATCAGCCC AAGGCCATGCCCTTCAGTTCACCATCGCTCCAGACTCCCCCGCCACTCCACAGCATGAGC CACAGCAGCAGCAGCCGCAGCCGCAGCCGCAGCAATAGCTAGTTACTTCAGTAGCGTCTC TCAACTACTGACTCGCACATGCAGAAGAAGAGGATACCTCAGCTAGTGGCCGCTTTGTTG TTTCCTGTTGCAACTGGCCCAGGGACGCTAAGAACCTGGCCTCGCCTTGTGTGGCCGGGT AGAAACCTTGTAAAACGCCAGAGATTCATTTGTTGCAAGCGACCGCAGCTTAAGCCCCGC TACCCTTCGATTTGTCTCTGTGTAACTCAAGCATTGATTTATTGTAAATTTGTCGTCTGT TGGAGTCCATTTTTTTAGTTCCTTTGCCAAGTGTTTTACTGCCATGTACAGTATTATTAC ATGGGAGCTTTTATCTTTCAAAGAATTAATCTGAGTGAGTGTGAAAAAAAAAAAAA



consensusID : consensus_12426#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 783
fasta sequence
                              [CTCACCCGTCGCGCAGTCTTATCATGACTCTCGGGTCTGTCCTATTAACTATAAGAGTGGAACATTTTATAAGTGGCACTATGCAGACCTTGAACGTGATAGAGAACTGTACAGGGGCGGATGTCTTGTAGGCGATTAAGTGTGCCGGGCAGGATATTTCCAGTTGCAAAGATGTAACCGGAATCCAGTGAGCGGGCGAAACACGCTTACTATAGGGCAAATTGGGACCGGACCCTCCGGAATCCTCAGGCTAGTGGCACATTTGTATTTGCCTGTTGCAATTGGCCCAGGGCCGCTAAGAACCTGGCCTCGCCTTGTGTGGCTGGGTAGAAACCTTGTAAACGCCAAAGATTCATTTGTGGCAAGGGACCGCAGCTTAAGCCCCTGCTACCCTTCGATTTGTCTCTGTGTAACTCAAGCATTGATTTATTGTAAATGTGTAGTCTGTTGGAGTCCATTTTTTTAGTTCCTTTGACAAGTGTTTTGCTGCCATGTGCACTATTATTGCATGGGAGCTTTTGTCTGACGGAGAATTAATATGAGTGAGTGTGAGACTGTTAGATGAAGAATNCTGAAAGGTTCAGCCCCTGTTTGGCATGGTTCTGGATTTTGCCCCCCTGACTGAATGTAGCTTCTCAGCCCAAAGTGGATCTCTCTCCCGACCAAGATAATCAGGTTACATGGCCTAAAGGCGGGTTTGGGGAATTCAGATCCTGCATTTGGCAGCTAGTATGGTCATTATGTTGCTGTTGTGCTAAATTAGGACGCATCAGCTTGTTACTT]

[-] EMBL CA757614             [CTCACCCGTCGCGCAGTCTTATCATGACTCTCGGGTCTGTCCTATTAACTATAAGAGTGGAACATTTTATAAGTGGCACTATGCAGACCTTGAACGTGATAGAGAACTGTACAGGGGCGGATGTCTTGTAGGCGATTAAGTGTGCCGGGCAGGATATTTCCAGTTGCAAAGATGTAACCGGAATCCAGTGAGCGGGCGAAACACGCTTACTATAGGGCAAATTGGGACCGGACCCTCCGGAATCCTCAGGCTAGTGGCACATTTGTATTTGCCTGTTGCAATTGGCCCAGGGCCGCTAAGAACCTGGCCTCGCCTTGTGTGGCTGGGTAGAAACCTTGTAAACGCCAAAGATTCATTTGTGGCAAGGGACCGCAGCTTAAGCCCCTGCTACCCTTCGATTTGTCTCTGTGTAACTCAAGCATTGATTTATTGTAAATGTGTAGTCTGTTGGAGTCCATTTTTTTAGTTCCTTTGACAAGTGTTTTGCTGCCATGTGCACTATTATTGCATGGGAGCTTTTGTCTGACGGAGAATTAATATGAGTGAGTGTGAGACTGTTAGATGAAGAATNCTGAAAGGTTCAGCCCCTGTTTGGCATGGTTCTGGATTTTGCCCCCCTGACTGAATGTAGCTTCTCAGCCCAAAGTGGATCTCTCTCCCGACCAAGATAATCAGGTTACATGGCCTAAAGGCGGGTTTGGGGAATTCAGATCCTGCATTTGGCAGCTAGTATGGTCATTATGTTGCTGTTGTGCTAAATTAGGACGCATCAGCTTGTTACTT]


>consensus_12426#1 CTCACCCGTCGCGCAGTCTTATCATGACTCTCGGGTCTGTCCTATTAACTATAAGAGTGG AACATTTTATAAGTGGCACTATGCAGACCTTGAACGTGATAGAGAACTGTACAGGGGCGG ATGTCTTGTAGGCGATTAAGTGTGCCGGGCAGGATATTTCCAGTTGCAAAGATGTAACCG GAATCCAGTGAGCGGGCGAAACACGCTTACTATAGGGCAAATTGGGACCGGACCCTCCGG AATCCTCAGGCTAGTGGCACATTTGTATTTGCCTGTTGCAATTGGCCCAGGGCCGCTAAG AACCTGGCCTCGCCTTGTGTGGCTGGGTAGAAACCTTGTAAACGCCAAAGATTCATTTGT GGCAAGGGACCGCAGCTTAAGCCCCTGCTACCCTTCGATTTGTCTCTGTGTAACTCAAGC ATTGATTTATTGTAAATGTGTAGTCTGTTGGAGTCCATTTTTTTAGTTCCTTTGACAAGT GTTTTGCTGCCATGTGCACTATTATTGCATGGGAGCTTTTGTCTGACGGAGAATTAATAT GAGTGAGTGTGAGACTGTTAGATGAAGAATNCTGAAAGGTTCAGCCCCTGTTTGGCATGG TTCTGGATTTTGCCCCCCTGACTGAATGTAGCTTCTCAGCCCAAAGTGGATCTCTCTCCC GACCAAGATAATCAGGTTACATGGCCTAAAGGCGGGTTTGGGGAATTCAGATCCTGCATT TGGCAGCTAGTATGGTCATTATGTTGCTGTTGTGCTAAATTAGGACGCATCAGCTTGTTA CTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12426#0      CACGCCTTCTTCCCCAACGACCAAACCAAAGTTTGGGTGAAGAAAAAAAAATATCGCCGC 60
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      GTTTTTATCCCCCACGAGACGAGTCGAGACGACCAAAGCCTAACTAATCGGGGGCAAGAC 120
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      GAGGAGGAGAGCGGATTCTCGTCGGCTTCGGCGACCGGAAGAGGAGAGGAGACCGACCCC 180
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      GCGCCGTGTTCCGCCGCCGCCGCCGCCGCCGACGACGACGACGGCAAGTAGGAATTTGAT 240
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      TCTCCTGGGGAATTAACTTGTTAGGAGAAAAGGAATTTGGGATGGGCGACCATGTGGTGG 300
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      TGAATGTGGAAGGCTTGGGAAACGATGGAGGGGCTGTGGAGAAGCCATCTGAGGCCGTGA 360
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      ACAGCTCAGTGGTGGCTGCTGCGTCGCTTTCTACGACTGTTGATACGGTCGAGGAGGGCG 420
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      GTGGAGAGGAGGAGCCGCTCATCCAGGCGGCGGAGTGCCGTATATGCCAGGAGGAGGATA 480
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      GCATCAAGAACCTCGAGAAGCCTTGTGCTTGCAGTGGCAGCCTCAAGTATGCTCATAGAG 540
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      CTTGTGTGCAACGCTGGTGCAATGAGAAAGGAGACATTACATGTGAAATCTGTCATGAGC 600
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      AATATAAGCATGGATACACAGCTCCACCTCGTGTTGAACCAGACGATACCATCATAGATA 660
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      TCGGTGGTGATTGGGCACGTGACCCAAGAATTATTGCTGTAGCGGCTGCACAACGTCGTC 720
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      TTCTTGAAACTGAGTATGATGAATATGCTGGTACTGATGCTAGTGGTGCTGCATTCTGCC 780
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      GTTCTGCTGCACTTATACTAATGGCCTTGTTGCTATTGAGGCATGCTTTGTCTATCTCAG 840
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      ACAATGAAGGAGATGATGATGCTTCTACCATGTTCTCGCTCTTTCTACTTCGAGCTGCTG 900
consensus_12426#1      ------------------------------------------------------------
                                                                                   

consensus_12426#0      GATTTCTGCTGCCATGCTATATCATGGCTTGGATATTCAGTATTTTGCATCGCCGGCGAC 960
consensus_12426#1      ---CTCACCCGTCGCGCAGTCTTAT--CATGACTCTCGGGTCTGTCCTATTAACTAT--- 52
                           **  * * *  **  * * **  * **  * *   ** * *   **   *      

consensus_12426#0      AAAGACAGGAAGCGGCTGCAATTGCTGCAGCAGAGGTGGCATTCATCCTGCA-ATCAGCC 1019
consensus_12426#1      -AAGAGTGGAACATTTTATAAGTGGCACTATGCAGACCTTGAACGTGATAGAGAACTGTA 111
                        ****  ****     *  ** **   *     **        * *  *  * * * *  

consensus_12426#0      CAAGGCC--ATGCCCTTCAGTTCACCATCGCTCCAGACTCCCCCGCCACTCCACAGCATG 1077
consensus_12426#1      CAGGGGCGGATGTCTTGTAGGCGATTA-------AGTGTGCCGGGC--------AGGAT- 155
                       ** ** *  *** * *  **   *  *       **  * **  **        ** ** 

consensus_12426#0      AGCCACAGCAGCAGCAGCCGCAGCCGCAGCCGCAGCAATAGCTAGTTACTTCAGTAGCGT 1137
consensus_12426#1      ATTTCCAGTTGCAA-AGATGTAACCGGAATC-CAGTGAGCGGGCGAAACACGCTTACTAT 213
                       *    ***  ***  **  * * *** *  * ***  *  *   *  **     **   *

consensus_12426#0      CTCTCAACTACTGACTCGCACATGCAGAAGAAGAGGATACCTCAGCTAGTGGCCGCTTTG 1197
consensus_12426#1      AGGGCAAATTGGGACCGGACCCTCCGGAA--------TCCTCAGGCTAGTGGCACATTTG 265
                           *** *   ***  *  * * * ***        * *    *********   ****

consensus_12426#0      TTGTTTCCTGTTGCAACTGGCCCAGGGACGCTAAGAACCTGGCCTCGCCTTGTGTGGCCG 1257
consensus_12426#1      TATTTGCCTGTTGCAATTGGCCCAGGGCCGCTAAGAACCTGGCCTCGCCTTGTGTGGCTG 325
                       *  ** ********** ********** ****************************** *

consensus_12426#0      GGTAGAAACCTTGTAAAACGCCAGAGATTCATTTGTTGCAAGCGACCGCAGCTTAAGCCC 1317
consensus_12426#1      GGTAGAAACCTTGTAAA-CGCCAAAGATTCATTTGTGGCAAGGGACCGCAGCTTAAGCCC 384
                       ***************** ***** ************ ***** *****************

consensus_12426#0      C-GCTACCCTTCGATTTGTCTCTGTGTAACTCAAGCATTGATTTATTGTAAATTTGTCGT 1376
consensus_12426#1      CTGCTACCCTTCGATTTGTCTCTGTGTAACTCAAGCATTGATTTATTGTAAATGTGTAGT 444
                       * *************************************************** *** **

consensus_12426#0      CTGTTGGAGTCCATTTTTTTAGTTCCTTTGCCAAGTGTTTTACTGCCATGTACAGTATTA 1436
consensus_12426#1      CTGTTGGAGTCCATTTTTTTAGTTCCTTTGACAAGTGTTTTGCTGCCATGTGCACTATTA 504
                       ****************************** ********** ********* ** *****

consensus_12426#0      TTACATGGGAGCTTTTATCTTTCAAAGAATTAATCTGAGTGAGTGTGAAA-----AAAAA 1491
consensus_12426#1      TTGCATGGGAGCTTTTGTCTGACGGAGAATTAATATGAGTGAGTGTGAGACTGTTAGATG 564
                       ** ************* ***  *  ********* ************* *     * *  

consensus_12426#0      AAAAA------------------------------------------------------- 1496
consensus_12426#1      AAGAATNCTGAAAGGTTCAGCCCCTGTTTGGCATGGTTCTGGATTTTGCCCCCCTGACTG 624
                       ** **                                                       

consensus_12426#0      ------------------------------------------------------------
consensus_12426#1      AATGTAGCTTCTCAGCCCAAAGTGGATCTCTCTCCCGACCAAGATAATCAGGTTACATGG 684
                                                                                   

consensus_12426#0      ------------------------------------------------------------
consensus_12426#1      CCTAAAGGCGGGTTTGGGGAATTCAGATCCTGCATTTGGCAGCTAGTATGGTCATTATGT 744
                                                                                   

consensus_12426#0      ---------------------------------------
consensus_12426#1      TGCTGTTGTGCTAAATTAGGACGCATCAGCTTGTTACTT 783
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)