These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12448#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 869 fasta sequence [NGNACGGTTGGGTACACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC-TTGGATTCTCCCA-GGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA-GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTATCCAAAT] [+] EMBL OSS14921A [NGNACGGTTGGGNACACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCA GGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA G TCATGG CTCAATAG TGGGAG AAGTTCAGGG ] [+] EMBL AK066780 [ gagtcaTACACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCA GGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTATCCAAA ] [+] EMBL AK062162 [ TACACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCA GGGTGCAACTCTTTC TTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTATCCAAA ] [+] EMBL OSS12478A [ ACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCAGGGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGNTCAACCACCAATCAAGGTTCATGGGCTCAATAGCTGGGGGCAAGTTCAG ] [+] EMBL OSS13261A [ ACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGCTTTGGGTTCTCCCA GGGTGCAACTCTTTCTGCTCTTTTGATAGGTac ] [+] EMBL CF303347 [ gATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCA GGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAG ] [+] EMBL CB679831 [ ATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCA GGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCT ] [-] EMBL CA762772 [ ccTTATGCTCTTNTGATGGGTTCCCAAGCCCAGGGCAAAGTGCTGAATGATCATCCCCCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTACCCT TAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCACAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTTTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAAATGTGGAGAAGCCATTTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTTTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTACCCAAAT] [-] EMBL CB679832 [ GTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTATCCAAAT] [+] EMBL AU174016 [ AGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTNTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATNTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTNTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTATCCAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||