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Oryza sativa
cluster # 12516 cluster # 12516       Sequences # 10       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12516#0 length = 1326 sequences # 6  
consensus_12516#1 length = 1279 sequences # 4  

consensusID : consensus_12516#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1326
fasta sequence
                              [TTCCTCGAGCACTGTTGGCCTACTGGAAAAGAGAACCCTATCTGCAATCGCCTCTTTGCCTCCCCGTCTCGGCGGAAGCGCCCATCGATTCCTCTCTCCGGCGAACACGCGGGTGGGCGGGTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGGTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCTCTGTCAAGGCTTATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAATGTCTCTTTCGCGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACGTGCGCGACTTCATGCCGAAAGGAAGAGTTTTTCCATGGGAGCTTTGCGAGTTGGCACTGGTTTTGTTCAGAATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCCATCACTGGCAGCACGACACAGTCAGCATCGAAGACTTGAAGTTGGCTGTCGAGCATCCTCTTTAGCGTCATTCAGCTACCCTGAGTTGACTTCGAAACCCAGATGGTGGTGGAGGACTGTAGCATGTGTGCCCTACTTGCTTCCACTCCACAACATGTGGTCATATGCCGAT-GTCATCTACCAGCTACACACATACTTGCA---GGGGTTTTCGTTGGTGTACACCTT-CATCGATACAATGA-CACTGTTTCCAGGATGGCTTTTGCTGGTGATTTTTATGACAGTGTACTTCTTTGTCGTGAGACGGAAGTGGTCGCCGCACTTTCTAAGGTTCCATGTCATCTTGGCTATCCTCCTGGACACTGGCTCCCAAGCAGTGGCAACAATGTGCACCTGGATGCCCAGCATCGTGTATCAGGGGACGCCTATGCAGTATTTCTGGATGGCTATTGCTTTCATACAGATCTTCACAGTGCTCGAGTGCATGCGATGCGCTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATCTCACACGGCATTTATCCATTCTGATCTGAATCTGTTCAGGTAGCCAACTGCCCACCATATCAGTATCAGAAGACTGAAGGGAAGAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTACAGTTATATAGACTGTATTTAATTTATTTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCACCTTTTGCTGTTGCAACAAAATTTGAACAGCAATAAGATTAGATATCTCGGATATGTTGAATTCTTCCTGTATTTTAGTTTTCTGTCGTTCTGTTTCTCGAAATGTGTAGATCTGCATTCCCTCTGCTAAAAAAAAAAAAAAAAAAAGGCCACAT]

[+] EMBL AK109391             [TTCCTCGAGCACTGTTGGCCTACTGGAAAAGAGAACCCTATCTGCAATCGCCTCTTTGCCTCCCCGTCTCGGCGGAAGCGCCCATCGATTCCTCTCTCCGGCGAACACGCGGGTGGGCGGGTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGGTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCTCTGTCAAGGCTTATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAATGTCTCTTTCGCGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACGTGCGCGACTTCATGCCGAAAGGAAGAGTTTTTCCATGGGAGCTTTGCGAGTTGGCACTGGTTTTGTTCAGAATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCCATCACTGGCAGCACGACACAGTCAGCATCGAAGACTTGAAGTTGGCTGTCGAGCATCCTCTTTAGCGTCATTCAGCTACCCTGAGTTGACTTCGAAACCCAGATGGTGGTGGAGGACTGTAGCATGTGTGCCCTACTTGCTTCCACTCCACAACATGTGGTCATATGCCGAT GTCATCTACCAGCTACACACATACTTGCA   GGGGTTTTCGTTGGTGTACACCTT CATCGATACAATGA CACTGTTTCCAGGATGGCTTTTGCTGGTGATTTTTATGACAGTGTACTTCTTTGTCGTGAGACGGAAGTGGTCGCCGCACTTTCTAAGGTTCCATGTCATCTTGGCTATCCTCCTGGACACTGGCTCCCAAGCAGTGGCAACAATGTGCACCTGGATGCCCAGCATCGTGTATCAGGGGACGCCTATGCAGTATTTCTGGATGGCTATTGCTTTCATACAGATCTTCACAGTGCTCGAGTGCATGCGATGCGCTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATCTCACACGGCATTTATCCATTCTGATCTGAATCTGTTCAGGTAGCCAACTGCCCACCATATCAGTATCAGAAGACTGAAGGGAAGAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTACAGTTATATAGACTGTATTTAATTTATTTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCACCTTTTGCTGTTGCAACAAAATTTGAACAGCAATAAGATTAGATATCTCGGATATGTTGAATTCTTCCTGTATTTTAGTTTTCTGTCGTTCTGTTTCTCGAAATGTGTAGATCTGCATTCCCTCTGCTAAAAAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL CF278258             [                                                                 GTCTCGGCGGAAGCGCCCATCGATTCCTCTCTCCGGCGAACACGCGGGTGGGCGGGTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGGTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCTCTGTCAAGGCTTATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAATGTCTCTTTCGCGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACGTGCGCGACTTCATGCCGAAAGGAAGAGTTTTTCCGTGGGAGCTTTGCGAGTTGGCACTGGTTTTGTTCAGAATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCCATCACTGGCAGCACGACACAGTCGGCATCGAAGACTTGAAGTTGGCTGTCGAGCATCCTCTTTAGCGTCATTCAGCTACCCTGAGTTGACTTCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK059994             [                                                                                            TCTCTCCGGCGAACACGCGGGTGGGCGGGTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGGTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCTCTGTCAAGGCTTATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAATGTCTCTTTCGCGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACGTGCGCGACTTCATGCCGAAAGGAAGAGTTTTTCCATGGGAGCTTTGCGAGTTGGCACTGGTTTTGTTCAGAATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCCATCACTGGCAGCACGACACAGTCAGCATCGAAGACTTGAAGTTGGCTGTCGAGCATCCTCTTTAGCGTCATTCAGCTACCCTGAGTTGACTTCGAAACCCAGATGGTGGTGGAGGACTGTAGCATGTGTGCCCTACTTGCTTCCACTCCACAACATGTGGTCATATGCCGAT GTCATCTACCAGCTACACACATACTTGCA   GGGGTTTTCGTTGGTGTACACCTT CATCGATACAATGA CACTGTTTCCAGGATGGCTTTTGCTGGTGATTTTTATGACAGTGTACTTCTTTGTCGTGAGACGGAAGTGGTCGCCGCACTTTCTAAGGTTCCATGTCATCTTGGCTATCCTCCTGGACACTGGCTCCCAAGCAGTGGCAACAATGTGCACCTGGATGCCCAGCATCGTGTATCAGGGGACGCCTATGCAGTATTTCTGGATGGCTATTGCTTTCATACAGATCTTCACAGTGCTCGAGTGCATGCGATGCGCTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATCTCACACGGCATTTATCCATTCTGATCTGAATCTGTTCAGGTAGCCAACTGCCCACCATATCAGTATCAGAAGACTGAAGGGAAGAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTACAGTTATATAGACTGTATTTAATTTATTTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCACCTTTTGCTGTTGCAACAAAATTTGAACAGCAATAAGATTAGATATCTC                                                                                                          ]
[+] EMBL CB681125             [                                                                                            TCTCTCCTTTGAA ACGCGGGTGGGCGGGTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGGTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCTCTGTCAAGGCTTATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAATGTCTCTTTCGCGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACGTGCGCGACTTCATGCCTAAAGGAAGAGTTTTTCCATGGGAGCTTTGCGAGTTGGCACTGGTTTTGTTCAGAATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCCATCACTGGCAGCACGACACAGTCAGCATCTAAGACTTGAAGTTGGCTGTCGAGCATCCTCTTTAGCGTCATTCAGCTACCCTGAGTTGACTTCGAAACCCAGATGGTGGTGGAGGACTGTAGCATGTGTGCCCTACTTGCTTCCACTCCACAACATGTGGTCATATGCCGAT GTCATCTACCAGCTACACACATACTTGCA   GGGGTTTTCGTTGGTGTACACCTT CATCGATACAATGA CACTGTTTCCAAGATGGCTTTTGCTGGTGATTTTTATGACAGTGTACTTCTTTGTCGTGAGACGGAAGTGGTCGCCGCACTTTCTAAGGATCCATGTCATCTTGGCTATCCTCCTGGACACTGGCTCCCAAGCAGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C72792               [                                                                                                     CGAACACGCGGGTGGGCGGGTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGGTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCTCTGTCAAGGCTTATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAATGTCTCTTTCGCGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACGTGCGCGACTTCATGCCGAAAGGAAGAGTTTTTCCATGGGAGCTTTGCNAGTTGGCACTGGTTTTGTTCAGAATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCCATCACTNGCAGCACGACACAGTCAGCATCGAANACTTGAAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CA759419             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ccCCGATCGTCATTTCCAAGGTAC CCCA AC TGCACCCAGGGTGTTAATTGGGGTCCACCTTGGATGAATACGGGGACCATTGTTACCAGGATGGCTTTTGCTGGTGGTTTTTCAGCCAGGGTCCTTTTTCGTCGTGAGACGGAAGTGGTCACCGCACTTTCTAAGGTTACATGTCATCTGGGCTATCCTACTGGACACTGGCTCCCAAGCAGTGGCAACAATGTGCCCCTGGATGCCCAGCATCGTGTATCAGGGGAAGCCTATGCAGTATTTCTGGATGGCTATTGCTTTCATACAGATCTTCACAGTGCTCGAGTGCATGCGATGCGCTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATCTCACACGGCATTTATCCATTCTGATCTGAATCTGTTCAGGTAGCCAACTGCCCCCCATATCAGTATCAGAAGACTGAAGGGAAGAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTACAGTTATATAGACTGTATTTAATTTATTTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCACCTTTTGCTGTTGCAACAAAATTTGAACAGCAATAAGATTAGATATCTCGGATATGTTGAATTCTTCCTGTATTTTAGTTTTCTGTCGTTCTGTTTCTCGAAATGTGTAGATCTGCATTCCCTCTGCAAAAA                       ]


>consensus_12516#0 TTCCTCGAGCACTGTTGGCCTACTGGAAAAGAGAACCCTATCTGCAATCGCCTCTTTGCC TCCCCGTCTCGGCGGAAGCGCCCATCGATTCCTCTCTCCGGCGAACACGCGGGTGGGCGG GTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGGTAATTCGGTGATTC GGCAAGGGCTGTATTTATGCAGAATGGTTCTCTGTCAAGGCTTATCTGCTGGACACGCTC AGCTGCTTGCCTTTCCTGCGGCTAAGCATAATGTCTCTTTCGCGAGAACATCGTGCCTGG GTACTCCGGCGGGATCATGGAGTGTAAAACGTGCGCGACTTCATGCCGAAAGGAAGAGTT TTTCCATGGGAGCTTTGCGAGTTGGCACTGGTTTTGTTCAGAATGACATGCTTGCATCGT TCGGAAGGGATGATTCTATCAAGGGCATTCCATCACTGGCAGCACGACACAGTCAGCATC GAAGACTTGAAGTTGGCTGTCGAGCATCCTCTTTAGCGTCATTCAGCTACCCTGAGTTGA CTTCGAAACCCAGATGGTGGTGGAGGACTGTAGCATGTGTGCCCTACTTGCTTCCACTCC ACAACATGTGGTCATATGCCGATGTCATCTACCAGCTACACACATACTTGCAGGGGTTTT CGTTGGTGTACACCTTCATCGATACAATGACACTGTTTCCAGGATGGCTTTTGCTGGTGA TTTTTATGACAGTGTACTTCTTTGTCGTGAGACGGAAGTGGTCGCCGCACTTTCTAAGGT TCCATGTCATCTTGGCTATCCTCCTGGACACTGGCTCCCAAGCAGTGGCAACAATGTGCA CCTGGATGCCCAGCATCGTGTATCAGGGGACGCCTATGCAGTATTTCTGGATGGCTATTG CTTTCATACAGATCTTCACAGTGCTCGAGTGCATGCGATGCGCTCTTGCTGGGATGTACC CGAATGTCCCTTTCATATCTCACACGGCATTTATCCATTCTGATCTGAATCTGTTCAGGT AGCCAACTGCCCACCATATCAGTATCAGAAGACTGAAGGGAAGAAGAGCAAGTAGGGTAG TAGTTTATTTTGTCATAGCTGCTTACAGTTATATAGACTGTATTTAATTTATTTATATTT TCTAAGCCTCCTGTAATTGCTATAAACATCACCTTTTGCTGTTGCAACAAAATTTGAACA GCAATAAGATTAGATATCTCGGATATGTTGAATTCTTCCTGTATTTTAGTTTTCTGTCGT TCTGTTTCTCGAAATGTGTAGATCTGCATTCCCTCTGCTAAAAAAAAAAAAAAAAAAAGG CCACAT



consensusID : consensus_12516#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1279
fasta sequence
                              [ATCTGCAAATCGGGGAAAAGAGAACCCTATCTGCAATCGCCTCTTTGCCTCCCCGTCTCGGCGGAAGCGCCCATCGATTCCTCTCTCCGGCGAACACGCGGGTGGGCGGGTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGTGATCCGATTCGCTCACATGTCTGTCCAGGTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCTCTGTCAAGGCTTATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAATGTCTCTTTCGCGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACGTGCGCGACTTCATGCCGAAAGGAAGAGTTTTTCCATGGGAGCTTTGCGAGTTGGCACTGGTTTTGTTCAGAATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCCATCACTGGCAGCACGACACAGTCAGCATCGAAGACTTGAAGTTGGCTGTCGAGCATCCTCTTTAGCGTCATTCAGCTACCCTGAGTTGACTTCGAAACCCAGATGGTGGTGGAGGACTGTAGCATGTGTGCCCTACTTGCTTCCACTCCACAACATGTGGTCATATGCCGATGTCATCTACCAGCTACACACATACTTGCAGGGGTTTTCGTTGGTGTACACCTTCATCGATACAATGACACTGTTTCCAGGATGGCTTTTGCTGGTGATTTTTATGACAGTGTACTTCTTTGTCGTGAGACGGAAGTGGTCGCCGCACTTTCTAAGGTTCCATGTCATCTTGGCTATCCTCCTGGACACTGGCTCCCAAGCAGTGGCAACAATGTGCACCTGGATGCCCAGCATCGTGTATCAGGGGACGCCTATGCAGTATTTCTGGATGGCTATTGCTTTCATACAGATCTTCACAGTGCTCGAGTGCATGCGATGCGCTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATCTCACACGGCATTTATCCATTCTGATCTGAATCTGTTCAGGTAGCCAACTGCCCACCATATCAGTATCAGAAGACTGAAGGGAAGAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTACAGTTATATAGACTGTATTTAATTTATTTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCACCTTTTGCTGTTGCAACAAAATTTGAACAGCAATAAGATTAGATATCTCGGATATGTTGAATTAAAAAAAAAAGAAAAAAAAAAAAAAAA]

[+] EMBL AK100091             [ATCTGCAAATCGGGGAAAAGAGAACCCTATCTGCAATCGCCTCTTTGCCTCCCCGTCTCGGCGGAAGCGCCCATCGATTCCTCTCTCCGGCGAACACGCGGGTGGGCGGGTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGTGATCCGATTCGCTCACATGTCTGTCCAGGTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCTCTGTCAAGGCTTATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAATGTCTCTTTCGCGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACGTGCGCGACTTCATGCCGAAAGGAAGAGTTTTTCCATGGGAGCTTTGCGAGTTGGCACTGGTTTTGTTCAGAATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCCATCACTGGCAGCACGACACAGTCAGCATCGAAGACTTGAAGTTGGCTGTCGAGCATCCTCTTTAGCGTCATTCAGCTACCCTGAGTTGACTTCGAAACCCAGATGGTGGTGGAGGACTGTAGCATGTGTGCCCTACTTGCTTCCACTCCACAACATGTGGTCATATGCCGATGTCATCTACCAGCTACACACATACTTGCAGGGGTTTTCGTTGGTGTACACCTTCATCGATACAATGACACTGTTTCCAGGATGGCTTTTGCTGGTGATTTTTATGACAGTGTACTTCTTTGTCGTGAGACGGAAGTGGTCGCCGCACTTTCTAAGGTTCCATGTCATCTTGGCTATCCTCCTGGACACTGGCTCCCAAGCAGTGGCAACAATGTGCACCTGGATGCCCAGCATCGTGTATCAGGGGACGCCTATGCAGTATTTCTGGATGGCTATTGCTTTCATACAGATCTTCACAGTGCTCGAGTGCATGCGATGCGCTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATCTCACACGGCATTTATCCATTCTGATCTGAATCTGTTCAGGTAGCCAACTGCCCACCATATCAGTATCAGAAGACTGAAGGGAAGAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTACAGTTATATAGACTGTATTTAATTTATTTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCACCTTTTGCTGTTGCAACAAAATTTGAACAGCAATAAGATTA                                                 ]
[-] EMBL CB681126             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCTATCAAGGGCATTCCATCACTGGCAGCACGACACAGTCAGCATCGAAGACTTGAAGTTGGCTGTCGAGCATCCTCTTTAGCGTCATTCAGCTACCCTGAGTTGACTTCGAAACCCAGATGGTGGTGGAGGACTGTAGCATGTGTGCCCTACTTGCTTCCACTCCACAACATGTGGTCATATGCCGATGTCATCTACCAGCTACACACATACTTGCAGGGGTTTTCGTTGGTGTACACCTTCATCGATACAATGACACTGTTTCCAGGATGGCTTTTGCTGGTGATTTTTATGACAGTGTACTTCTTTGTCGTGAGACGGAAGTGGTCGCCGCACTTTCTAAGGTTCCATGTCATCTTGGCTATCCTCCTGGACACTGGCTCCCAAGCAGTGGCAACAATGTGCACCTGGATGCCCAGCATCGTGTATCAGGGGACGCCTATGCAGTATTTCTGGATGGCTATTGCTTTCATACAGATCTTCACAGTGCTCGAGTGCATGCGATGCGCTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATCTCACACGGCATTTATCCATTCTGATCTGAATCTGTTCAGGTAGCCAACTGCCCACCATATCAGTATCAGAAGACTGAAGGGAAGAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTACAGTTATATAGACTGTATTTAATTTATTTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCACCTTTTGCTGTTGCAACAAAATTTGAACAGCAATAAGATTAGATATCTCGGATATGTTGAATTAAAAAAAAAAGA               ]
[-] EMBL CF278259             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GATGCGCTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATTTCACACGGCATTTATCCATTTTGATTTGAATCTGTTCAGGTAGCCAACTGCCCAACAAAACAGTATCAGAAGACTGAAAGAAAAAAGAGCAAGTAGGGTAAAAAATTATTTTGTCATAGCTGCTTACAGTTATATAGACTGTATTTAATTTAATTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCACCTTTTGCTGTTGCAACAAAATTTGAACAGCAAT                                                        ]
[+] EMBL AU085891             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGNTTTTGCTGGGATGTACCCGAATGNCCCTTTCATATCTCACACGGCATTTATCCATTCTGATCTGAATNTGTTCAGGTAGCCAACTNCCCACCATATCAGTATCAGAAGACTGAAGGGAAGAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTANAGTTATATAGACTGTATTTAATTTATTTATATTTTNTAAGCCTCCTGTAATTGCTATAAACATCNCCTTTTGCTGTTGCAACAAAATTTGAACAGCAATAAGATTAGATATCTCGGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12516#1 ATCTGCAAATCGGGGAAAAGAGAACCCTATCTGCAATCGCCTCTTTGCCTCCCCGTCTCG GCGGAAGCGCCCATCGATTCCTCTCTCCGGCGAACACGCGGGTGGGCGGGTCGGGTCTCC TCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGTGATCCGATTCGCTCACATGTCTGTC CAGGTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCTCTGTCAAGGCT TATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAATGTCTCTTTCG CGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACGTGCGCGACTTC ATGCCGAAAGGAAGAGTTTTTCCATGGGAGCTTTGCGAGTTGGCACTGGTTTTGTTCAGA ATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCCATCACTGGCAG CACGACACAGTCAGCATCGAAGACTTGAAGTTGGCTGTCGAGCATCCTCTTTAGCGTCAT TCAGCTACCCTGAGTTGACTTCGAAACCCAGATGGTGGTGGAGGACTGTAGCATGTGTGC CCTACTTGCTTCCACTCCACAACATGTGGTCATATGCCGATGTCATCTACCAGCTACACA CATACTTGCAGGGGTTTTCGTTGGTGTACACCTTCATCGATACAATGACACTGTTTCCAG GATGGCTTTTGCTGGTGATTTTTATGACAGTGTACTTCTTTGTCGTGAGACGGAAGTGGT CGCCGCACTTTCTAAGGTTCCATGTCATCTTGGCTATCCTCCTGGACACTGGCTCCCAAG CAGTGGCAACAATGTGCACCTGGATGCCCAGCATCGTGTATCAGGGGACGCCTATGCAGT ATTTCTGGATGGCTATTGCTTTCATACAGATCTTCACAGTGCTCGAGTGCATGCGATGCG CTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATCTCACACGGCATTTATCCATTCTG ATCTGAATCTGTTCAGGTAGCCAACTGCCCACCATATCAGTATCAGAAGACTGAAGGGAA GAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTACAGTTATATAGACTGTA TTTAATTTATTTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCACCTTTTGCTGT TGCAACAAAATTTGAACAGCAATAAGATTAGATATCTCGGATATGTTGAATTAAAAAAAA AAGAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12516#0      TTCCTCGAGCACTGTTGGCCTACTGGAAAAGAGAACCCTATCTGCAATCGCCTCTTTGCC 60
consensus_12516#1      ---------ATCTGCAAATCGG--GGAAAAGAGAACCCTATCTGCAATCGCCTCTTTGCC 49
                                  ***     *    ************************************

consensus_12516#0      TCCCCGTCTCGGCGGAAGCGCCCATCGATTCCTCTCTCCGGCGAACACGCGGGTGGGCGG 120
consensus_12516#1      TCCCCGTCTCGGCGGAAGCGCCCATCGATTCCTCTCTCCGGCGAACACGCGGGTGGGCGG 109
                       ************************************************************

consensus_12516#0      GTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAG--------------- 165
consensus_12516#1      GTCGGGTCTCCTCTCGCCGAAGCGCCACCTCGGCTCGGTGTGAAGTGATCCGATTCGCTC 169
                       *********************************************               

consensus_12516#0      --------------GTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCT 211
consensus_12516#1      ACATGTCTGTCCAGGTAATTCGGTGATTCGGCAAGGGCTGTATTTATGCAGAATGGTTCT 229
                                     **********************************************

consensus_12516#0      CTGTCAAGGCTTATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAA 271
consensus_12516#1      CTGTCAAGGCTTATCTGCTGGACACGCTCAGCTGCTTGCCTTTCCTGCGGCTAAGCATAA 289
                       ************************************************************

consensus_12516#0      TGTCTCTTTCGCGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACG 331
consensus_12516#1      TGTCTCTTTCGCGAGAACATCGTGCCTGGGTACTCCGGCGGGATCATGGAGTGTAAAACG 349
                       ************************************************************

consensus_12516#0      TGCGCGACTTCATGCCGAAAGGAAGAGTTTTTCCATGGGAGCTTTGCGAGTTGGCACTGG 391
consensus_12516#1      TGCGCGACTTCATGCCGAAAGGAAGAGTTTTTCCATGGGAGCTTTGCGAGTTGGCACTGG 409
                       ************************************************************

consensus_12516#0      TTTTGTTCAGAATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCC 451
consensus_12516#1      TTTTGTTCAGAATGACATGCTTGCATCGTTCGGAAGGGATGATTCTATCAAGGGCATTCC 469
                       ************************************************************

consensus_12516#0      ATCACTGGCAGCACGACACAGTCAGCATCGAAGACTTGAAGTTGGCTGTCGAGCATCCTC 511
consensus_12516#1      ATCACTGGCAGCACGACACAGTCAGCATCGAAGACTTGAAGTTGGCTGTCGAGCATCCTC 529
                       ************************************************************

consensus_12516#0      TTTAGCGTCATTCAGCTACCCTGAGTTGACTTCGAAACCCAGATGGTGGTGGAGGACTGT 571
consensus_12516#1      TTTAGCGTCATTCAGCTACCCTGAGTTGACTTCGAAACCCAGATGGTGGTGGAGGACTGT 589
                       ************************************************************

consensus_12516#0      AGCATGTGTGCCCTACTTGCTTCCACTCCACAACATGTGGTCATATGCCGATGTCATCTA 631
consensus_12516#1      AGCATGTGTGCCCTACTTGCTTCCACTCCACAACATGTGGTCATATGCCGATGTCATCTA 649
                       ************************************************************

consensus_12516#0      CCAGCTACACACATACTTGCAGGGGTTTTCGTTGGTGTACACCTTCATCGATACAATGAC 691
consensus_12516#1      CCAGCTACACACATACTTGCAGGGGTTTTCGTTGGTGTACACCTTCATCGATACAATGAC 709
                       ************************************************************

consensus_12516#0      ACTGTTTCCAGGATGGCTTTTGCTGGTGATTTTTATGACAGTGTACTTCTTTGTCGTGAG 751
consensus_12516#1      ACTGTTTCCAGGATGGCTTTTGCTGGTGATTTTTATGACAGTGTACTTCTTTGTCGTGAG 769
                       ************************************************************

consensus_12516#0      ACGGAAGTGGTCGCCGCACTTTCTAAGGTTCCATGTCATCTTGGCTATCCTCCTGGACAC 811
consensus_12516#1      ACGGAAGTGGTCGCCGCACTTTCTAAGGTTCCATGTCATCTTGGCTATCCTCCTGGACAC 829
                       ************************************************************

consensus_12516#0      TGGCTCCCAAGCAGTGGCAACAATGTGCACCTGGATGCCCAGCATCGTGTATCAGGGGAC 871
consensus_12516#1      TGGCTCCCAAGCAGTGGCAACAATGTGCACCTGGATGCCCAGCATCGTGTATCAGGGGAC 889
                       ************************************************************

consensus_12516#0      GCCTATGCAGTATTTCTGGATGGCTATTGCTTTCATACAGATCTTCACAGTGCTCGAGTG 931
consensus_12516#1      GCCTATGCAGTATTTCTGGATGGCTATTGCTTTCATACAGATCTTCACAGTGCTCGAGTG 949
                       ************************************************************

consensus_12516#0      CATGCGATGCGCTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATCTCACACGGCATT 991
consensus_12516#1      CATGCGATGCGCTCTTGCTGGGATGTACCCGAATGTCCCTTTCATATCTCACACGGCATT 1009
                       ************************************************************

consensus_12516#0      TATCCATTCTGATCTGAATCTGTTCAGGTAGCCAACTGCCCACCATATCAGTATCAGAAG 1051
consensus_12516#1      TATCCATTCTGATCTGAATCTGTTCAGGTAGCCAACTGCCCACCATATCAGTATCAGAAG 1069
                       ************************************************************

consensus_12516#0      ACTGAAGGGAAGAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTACAGTTA 1111
consensus_12516#1      ACTGAAGGGAAGAAGAGCAAGTAGGGTAGTAGTTTATTTTGTCATAGCTGCTTACAGTTA 1129
                       ************************************************************

consensus_12516#0      TATAGACTGTATTTAATTTATTTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCA 1171
consensus_12516#1      TATAGACTGTATTTAATTTATTTATATTTTCTAAGCCTCCTGTAATTGCTATAAACATCA 1189
                       ************************************************************

consensus_12516#0      CCTTTTGCTGTTGCAACAAAATTTGAACAGCAATAAGATTAGATATCTCGGATATGTTGA 1231
consensus_12516#1      CCTTTTGCTGTTGCAACAAAATTTGAACAGCAATAAGATTAGATATCTCGGATATGTTGA 1249
                       ************************************************************

consensus_12516#0      ATTCTTCCTGTATTTTAGTTTTCTGTCGTTCTGTTTCTCGAAATGTGTAGATCTGCATTC 1291
consensus_12516#1      ATTAAAAAAAAAAGAAAAAAAAAAAAAAAA------------------------------ 1279
                       ***        *    *                                           

consensus_12516#0      CCTCTGCTAAAAAAAAAAAAAAAAAAAGGCCACAT 1326
consensus_12516#1      -----------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)