These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12584#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2751 fasta sequence [GCGACCGACGCAATCGCTGGGAGCCGGTAGCCGGCGAGCGTCCGGGGTGCGTGTGTATCGTCGATCCTTATCCTATCACCAGCCGCCCACCTATAAATGGCGTATTAATTTGGCCACCATAAACCCGGCGTTGAGAGCGACAACTAAAACCTCGTGGAATGGGGGAGCCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCGTCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGCTGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGCGCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGC-GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGAAAAATTAAATAGATGCATTTAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAGAGGTCTTGGGTTGTGTGTGTCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTTGTGTGTCTAACTTTTTGTGGCTTTAACATATTTTTATTGGTCTGATAAAAAAAATGATGTTTGCAAATAGTGGTGGTCGTGGTATAAAAAACAACTTTTTTATGGTGCACATTTTTACCAAACAAATTATAGCTCGTGTACTTACCATGTTTTATCTGTGAGCTAGTTGAGAAAATATAATTTGTGTCATGCTTTTAAAGATATTTCACTTCACACACATGAATCTGTCAAAAGTGCTAGTGTTGTTAGTGTGACAACTTACCTATCAGTTCATTACTCCCTCTGTTTCACAATGTAAATCATTTTAGCATTTCCCACATTCATATTGATGTTAATGAATCTAGACATATATATCCATCTAGATTCATTAACATCAATATGAATATGAAAAATGCTAGAATGACTTACATTGTAAAACCGAGGAAGTAATAAGCTAATCCCAAGAAAGCAAATAACTTTCGTGTATATTCGATCGGTTCATATTATACTTAGGCTCATACAATGTATCGACCAATTATATTGTTGGTGTTGTAGTAGAAATATGTTTCTGTCAGTTTCACTTTGCTTGTGTTGTTCGTGGTATCAACCTAGCTATTTTGTGTTGGTATTATAGCAAAAATATGTTTTTACCAATTTTGCTTTACATGTGTTGTTTCTTTGTACTGAACCCACGTGCCAATGCATTCTACTAGAATGTGATGAAGAAATTTCAATATCATGAATAGGTTTCTCTCACAATACATCAATGTGTACTAACTAGAGGAACACAGGAAGGCCACCACGGTGTGGGCCAAGGTGGGGAGCATTGAGGACCGCGTGCTATTCCTAGACAAGTAGGGGCATGGGTTCTCGCTAGAGCCCAACGGCGCGTCGGGACTAAGGCAGGATTGCGTCTACTTTATGCATGGACGTGGCTGGATTCCGAGGAGTACAAGTTCCTTTATCGGTATAGCATGGAGGACAGAAAGGTTGATAGAGTTGTGTCGCTAGTCCACACGTTTAGGGACACCTGGGTTGTCCCTAGATTGTGTCCCTCCAAATAAGATGCGTCCCGACAGCGTCGTTGGTTTTTGCGGTGCTCCTTGTAGTTTTTTCTCCTTGAATTTCCATTCAAAAATTAGGAGGATGTGCTTAGTTGCTCCGGGTGAATGATTGTCCTAACAAACATGGATAAATTTTGGGTTTTGTGTGTCACACAACAATAAGCATCAAATTACATGTATTTCCCATTGTGTTGAATAAAATTTGATTTGTGTGTCTTTTT] [+] EMBL BI796923 [GCGACCGACGCAATCGCTGGGAGCCGGTAGCCGGCGAGCGTCCGGGGTGCGTGTGTATCGTCGATCCTTATCCTATCACCAGCCGCCCACCTATAAATGGCGTATTAATTTGGCCACCATAAACCCGGCGTTGAGAGCGACAACTAAAACCTCGTGGAATGGGGGA CCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTC GCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCG ] [+] EMBL AK100120 [ GAGCGACAACTAAAACCTCGTGGAATGGGGGAGCCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCAGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCGTCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGCTGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGCGCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGC GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCC ] [+] EMBL CB667684 [ AACCTCGTGGAATGGGGGAGCCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCGTCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGCTGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGCGCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGC GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGC ] [+] EMBL AK109758 [ CTCGTGGAATGGGGGAGCCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCGTCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGCTGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGCGCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGC GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGAAAAATTAAATAGATGCATTTAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAGAGGTCTTGGGTTGTGTGTGTCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTTGTGTGTCTAACTTTTTGTGGCTTTAACATATTTTTATTGGTCTGATAAAAAAAATGATGTTTGCAAATAGTGGTGGTCGTGGTATAAAAAACAACTTTTTTATGGTGCACATTTTTACCAAACAAATTATAGCTCGTGTACTTACCATGTTTTATCTGTGAGCTAGTTGAGAAAATATAATTTGTGTCATGCTTTTAAAGATATTTCACTTCACACACATGAATCTGTCAAAAGTGCTAGTGTTGTTAGTGTGACAACTTACCTATCAGTTCATTACTCCCTCTGTTTCACAATGTAAATCATTTTAGCATTTCCCACATTCATATTGATGTTAATGAATCTAGACATATATATCCATCTAGATTCATTAACATCAATATGAATATGAAAAATGCTAGAATGACTTACATTGTAAAACCGAGGAAGTAATAAGCTAATCCCAAGAAAGCAAATAACTTTCGTGTATATTCGATCGGTTCATATTATACTTAGGCTCATACAATGTATCGACCAATTATATTGTTGGTGTTGTAGTAGAAATATGTTTCTGTCAGTTTCACTTTGCTTGTGTTGTTCGTGGTATCAACCTAGCTATTTTGTGTTGGTATTATAGCAAAAATATGTTTTTACCAATTTTGCTTTACATGTGTTGTTTCTTTGTACTGAACCCACGTGCCAATGCATTCTACTAGAATGTGATGAAGAAATTTCAATATCATGAATAGGTTTCTCTCACAATACATCAATGTGTACTAACTAGAGGAACACAGGAAGGCCACCACGGTGTGGGCCAAGGTGGGGAGCATTGAGGACCGCGTGCTATTCCTAGACAAGTAGGGGCATGGGTTCTCGCTAGAGCCCAACGGCGCGTCGGGACTAAGGCAGGATTGCGTCTACTTTATGCATGGACGTGGCTGGATTCCGAGGAGTACAAGTTCCTTTATCGGTATAGCATGGAGGACAGAAAGGTTGATAGAGTTGTGTCGCTAGTCCACACGTTTAGGGACACCTGGGTTGTCCCTAGATTGTGTCCCTCCAAATAAGATGCGTCCCGACAGCGTCGTTGGTTTTTGCGGTGCTCCTTGTAGTTTTTTCTCCTTGAATTTCCATTCAAAAATTAGGAGGATGTGCTTAGTTGCTCCGGGTGAATGATTGTCCTAACAAACATGGATAAATTTTGGGTTTTGTGTGTCACACAACAATAAGCATCAAATTACATGTATTTCCCATTGTGTTGAATAAAATTTGATTTGTGTGTCTTTTT] [+] EMBL CB668167 [ TCGTGGAATGGGGGAGCCGCCGGGGAAGACCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCCCGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCTTCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGCTGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCTACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCGTCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGCTGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGCGCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGC GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCC ] [-] EMBL CB668168 [ GCCGCCGC GGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTTGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTGGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATG ] [-] EMBL CB665113 [ GCCGCGGGCGGCGCTCCCCTGGTGGTGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGGAAAATTAAATAGATGCATTTAGTTGCTCTGGGT ] [-] EMBL CB667685 [ AGTGGACCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACGTCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCGTCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACCTGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGAAAAATTAAATAGATGCATTTAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAGAGGTCTTGGGTTGTGTGTGTCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATT ] [-] EMBL CB654162 [ GTGCTGTTCCCGCGCGACGGCGTGGTGACCACGTCGGCCGAGGACTATTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCGCCCCCGCGTGGGCCAAGGTGGAGAGCGTTGGGGATAGCGTGCTTTTTTTTGACAAGCACGGGCATGGGTTTTTGCTGGAGCCCAACGGCGCCGCGGAGATGAAGCGGGATTGTGTTTACTTCATGCACGAGAAGTGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTGGATAGAGTTGTGTTGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGGTTATCGGTGTTTATTGTAGTTTTTTGTCCCTGAATTTTCATTGAAAAATTAAATAGATGCATTTAGTTta ] [+] EMBL AA751397 [ CGTGCTCTTTTTCGACAAGCACGGGCACGGGTTCTCGCTGGAGCCCAATGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACTTCATGCACGAGAAGCGGACATGGCTGGACNCCNGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAG ] consensusID : consensus_12584#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 388 fasta sequence [GAGCAGCTGAGCTTGAAACNTNAAACGGNATTGCATCTACTNCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTNCATTGAAAAATTAAATAGATGCNTTTAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAAANGTCTTGGGTTGTGTGTGTCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTT] [+] EMBL AA752030 [GAGCAGCTGAGCTTGAAACNTNAAACGGNATTGCATCTACTNCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATAACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCTGGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTTTCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTNCATTGAAAAATTAAATAGATGCNTTTAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAAANGTCTTGGGTTGTGTGTGTCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_12584#0 GCGACCGACGCAATCGCTGGGAGCCGGTAGCCGGCGAGCGTCCGGGGTGCGTGTGTATCG 60 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TCGATCCTTATCCTATCACCAGCCGCCCACCTATAAATGGCGTATTAATTTGGCCACCAT 120 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 AAACCCGGCGTTGAGAGCGACAACTAAAACCTCGTGGAATGGGGGAGCCGCCGGGGAAGA 180 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CCGGGCGACGTGACGCGGGCGGGACGGCGCCGGCGGTGGAAGACCGGTGGACGCAGCTCC 240 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CGCCGGAGCTCCTCCCGCTCATCTGCAAGAAGCTGCCGGACTCGGCCGACTTCGTGCGCT 300 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TCCGGACGGTATGCAGCGCGTGGCGCGACGCCGCCCCGTTGTCCGACGTCCCGCCGCAGC 360 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TGCCGTGGGTCGTCGAGCGCCGCGGGTCCGCGTTCCAGGCGAGGGCCCATTTCCGCTTCT 420 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 ACTCGCCTAGCTCCGGGAGGACGTACGGCGTCCGTGGCTACGGCGGCCGCTCCTGGCTCG 480 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TCATGGGCGGCGCGTGCCAGGAGCACCTCGTCACCACCGTGGACCTCTCCACGACGGCGC 540 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TGTACAACCCGCTCACCGGGGAGCGCCTCGCGCTGCCCCCCGCGCCGTACCCGCAGTGGC 600 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 GCCACGGCGTCGTCCACGTCGTGGCCGCCGGCCGCCGCCGCGGCGGCGCTCCCCTGGTGG 660 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TGAACGCATCCACGAGGACGGGGCACTTCGGGTACTGCCGCCAGGGGGATACCAAGTGGA 720 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CCCTGGTCGACGGGCGCCAGGACATGGGCCACCGCGCGTACCACGGCGGGCGGTTCTACG 780 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TCAACACAAACGCGCAGGAGACGCTGGTGATCGACGCCTCCACCGGCGCCGTCGAGTCCG 840 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TCCTGCCGCCGCCGCCACGCTCGGCCGACGCCGGTGCCGGCGTCTCCTGCGGGGACTACC 900 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TGGTGGAGTCGCGCGGGAAGCTGATCAGGGCCGTGCTGTTCCCGCGCGACGGCGTGGTGA 960 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CCACGTCGGCCGAGGACTACTACCTCAACGTGTATCAGCTGCAGGAGGACGGGAAGGCCG 1020 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CCGCCGCGTGGGCCAAGGTGGAGAGCGTCGGGGATAGCGTGCTCTTTTTCGACAAGCACG 1080 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 GGCACGGGTTCTCGCTGGAGCCCAACGGCGCCGCGGAGCTGAAGCGGGATTGCGTCTACT 1140 consensus_12584#1 -------------------GAGCAGCTGAGCTTGAAACNTNAAACGGNATTGCATCTACT 41 * ** * * ** * * ** *** ***** ****** consensus_12584#0 TCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATA 1200 consensus_12584#1 NCATGCACGAGAAGCGGACATGGCTGGACGCCGGGGAGTACAGGTTCCTTTGTCGGTATA 101 *********************************************************** consensus_12584#0 ACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCT 1260 consensus_12584#1 ACATGGAGACCGGAGAGGTCGATAGAGTTGTGTCGCTGCCCGACACGTTCGGGGACACCT 161 ************************************************************ consensus_12584#0 GGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTT 1320 consensus_12584#1 GGGTTGTCCCCGGATTGTGCCCCTCTGAATAAGATGTGTCCCGGCGATGTTGTTGGTTTT 221 ************************************************************ consensus_12584#0 TCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTTCATTGAAAAATTAAATAGATGCATT 1380 consensus_12584#1 TCGGTGTTTCTTGTAGTTTTTTCTCCTTGAATTTNCATTGAAAAATTAAATAGATGCNTT 281 ********************************** ********************** ** consensus_12584#0 TAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAGAGGTCTTGGGTTGTGTGTG 1440 consensus_12584#1 TAGTTGCTCTGGGTGAATGATTGGTCTTTGAAAAATGAGAAANGTCTTGGGTTGTGTGTG 341 **************************************** * ***************** consensus_12584#0 TCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTTGTGTGTCTAACTT 1500 consensus_12584#1 TCACACAATCACATGCATTTTCCATTATGTTTAATAAAATTTAATTT------------- 388 *********************************************** consensus_12584#0 TTTGTGGCTTTAACATATTTTTATTGGTCTGATAAAAAAAATGATGTTTGCAAATAGTGG 1560 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TGGTCGTGGTATAAAAAACAACTTTTTTATGGTGCACATTTTTACCAAACAAATTATAGC 1620 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TCGTGTACTTACCATGTTTTATCTGTGAGCTAGTTGAGAAAATATAATTTGTGTCATGCT 1680 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TTTAAAGATATTTCACTTCACACACATGAATCTGTCAAAAGTGCTAGTGTTGTTAGTGTG 1740 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 ACAACTTACCTATCAGTTCATTACTCCCTCTGTTTCACAATGTAAATCATTTTAGCATTT 1800 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CCCACATTCATATTGATGTTAATGAATCTAGACATATATATCCATCTAGATTCATTAACA 1860 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TCAATATGAATATGAAAAATGCTAGAATGACTTACATTGTAAAACCGAGGAAGTAATAAG 1920 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CTAATCCCAAGAAAGCAAATAACTTTCGTGTATATTCGATCGGTTCATATTATACTTAGG 1980 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CTCATACAATGTATCGACCAATTATATTGTTGGTGTTGTAGTAGAAATATGTTTCTGTCA 2040 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 GTTTCACTTTGCTTGTGTTGTTCGTGGTATCAACCTAGCTATTTTGTGTTGGTATTATAG 2100 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CAAAAATATGTTTTTACCAATTTTGCTTTACATGTGTTGTTTCTTTGTACTGAACCCACG 2160 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TGCCAATGCATTCTACTAGAATGTGATGAAGAAATTTCAATATCATGAATAGGTTTCTCT 2220 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CACAATACATCAATGTGTACTAACTAGAGGAACACAGGAAGGCCACCACGGTGTGGGCCA 2280 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 AGGTGGGGAGCATTGAGGACCGCGTGCTATTCCTAGACAAGTAGGGGCATGGGTTCTCGC 2340 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TAGAGCCCAACGGCGCGTCGGGACTAAGGCAGGATTGCGTCTACTTTATGCATGGACGTG 2400 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 GCTGGATTCCGAGGAGTACAAGTTCCTTTATCGGTATAGCATGGAGGACAGAAAGGTTGA 2460 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TAGAGTTGTGTCGCTAGTCCACACGTTTAGGGACACCTGGGTTGTCCCTAGATTGTGTCC 2520 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 CTCCAAATAAGATGCGTCCCGACAGCGTCGTTGGTTTTTGCGGTGCTCCTTGTAGTTTTT 2580 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TCTCCTTGAATTTCCATTCAAAAATTAGGAGGATGTGCTTAGTTGCTCCGGGTGAATGAT 2640 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TGTCCTAACAAACATGGATAAATTTTGGGTTTTGTGTGTCACACAACAATAAGCATCAAA 2700 consensus_12584#1 ------------------------------------------------------------ consensus_12584#0 TTACATGTATTTCCCATTGTGTTGAATAAAATTTGATTTGTGTGTCTTTTT 2751 consensus_12584#1 --------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||