|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12643#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1187 fasta sequence
[GGAGGAGTGGAGGCAGGCGTGCGCCAGCGCGTTCGCCGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGG-GGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGT-GATGC-GGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTC-GCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCC-GACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGTAAATACCTCGCATAACTTAAAAGG]
[+] EMBL AK068836 [GGAGGAGTGGAGGCAGGCGTGCGCCAGCGCGTTCGCCGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCAC AGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGG GGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGT GATGC GGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTC GCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCC GACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGTAAATACCTCGCAT ]
[+] EMBL AK067205 [GGAGGAGTGGAGGCAGGCGTGCGCCAGCGCGTTCGCCGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGG GGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGT GATGC GGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTC GCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCC GACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGTA ]
[+] EMBL CB652267 [ CGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGG GGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGT GATGC GGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTC GCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCC GACCTGTTCATGGTGCTCACCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAATTCCCAACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCACCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTCTGCAGTTTTTGT ]
[+] EMBL CB640202 [ AGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGG GGAGGGTGTTCGGGCTGAAGGACTATCCGGGGGT GATGC GGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTC GCCATGGCGAGGTCGCTGGGCGACATGATGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACTGGCGCC TACCTGTTCATGGTGCTCGCCCCAGA ]
[+] EMBL BI811415 [ TGGACCACAAACCAAGCGTGCCCGAGGA GCGGCGAGGATCAAGCGGACCGGGG GGA GGT TTCGGGCTGAAGGACGAGCCAGGGGTAGATGC GGGTGT GCTGCCCGGGGAGAACTCGCCGGGGCTCAGCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCCAGACCTGTTCATGGTGCTCGCCACGGACGGGGTGT GGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAA GCGGTGGTGGA GCC CCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCGCC ]
[+] EMBL BI810104 [ TCAAGCGGAGCGGGGTGGAGGTTGTTCGGGCTGAAGGACGAGCCAGGGGTAGATGCAGGGTGT GCTGCCCGGGGAGAACTCGCCGGGGCTC CCCATGGCGAGGTC CTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCC GACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGA GCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCAC GCCGCCGCCGCCGCCGC ]
[-] EMBL CB655345 [ GCGTGACGGGCGCC GACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTC TTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAAGTTTGGAATGACATTGTAAATACCTCGCATAACTTAAAAGG]
[-] EMBL CB684724 [ TGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTTTGCTTTTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCCGCCGGGGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTAGAGCTTTGGAATGACATTGTAAAT ]
consensusID : consensus_12643#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1183 fasta sequence
[GTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGTGCGCCAGCGCGTTCGCCGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGTGATGCGGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTCGCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCCGACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGACGCCGCGGAAGCAGCACGCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGTA]
[+] EMBL AK072080 [GTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGGCGGTGGTGGAGGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGTGCGCCAGCGCGTTCGCCGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGACGGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAGGGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGACCACAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGTTCGGGCTGAAGGACGAGCCGGGGGTGATGCGGGTGTGGCTCCCCGGCGAGAACTCGCCGGGGCTCGCCATGGCGAGGTCGCTGGGCGACATGAGGCTGAAGCGGCACGGCGTGATCCCGGCGCCGGAGGTGACGTCGCGGCGCGTGACGGGCGCCGACCTGTTCATGGTGCTCGCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGACGCCGCGGAAGCAGCACGCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGTA]
consensusID : consensus_12643#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence
[AGGCCGTGCTCCCACCATGTCGGACACCGGCTACCTCCAGCGGTGCAGCTGACGGTGGACCAACAAACCAAGCGTGCCCGAGGAGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGTTCGGCTGAAGGACGAGCCAGGGGTGATGCGGGTGTGGCTGCCCGGGGAGAACTCGCCAGGGGCTCGCACATGGCGAGGTCAGCTGGGCGACATGAGGCTGAAGCAGGCACGGCAGTGATCCCGGCGCACGGAGGTGACGTCGCGGCGCAGTGACGGGCAGCACGACCTGTTCATGGTGCTCAGCCACGGACGGGGTGTGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCAGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGCGTGTGGAGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCAGCCGTCTGCCTCTTCCTCCACAGACCACACCCTCGGCACGCCCCCGCCGCCCCACACCCCCGCCGCTTA]
[+] EMBL BI810991 [AGGCCGTGCTCCCACCATGTCGGACACCGGCTACCTCCAGCGGTGCAGCTGACGGTGGACCAACAAACCAAGCGTGCCCGAGGAGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGTTCGGCTGAAGGACGAGCCAGGGGTGATGCGGGTGTGGCTGCCCGGGGAGAACTCGCCAGGGGCTCGCACATGGCGAGGTCAGCTGGGCGACATGAGGCTGAAGCAGGCACGGCAGTGATCCCGGCGCACGGAGGTGACGTCGCGGCGCAGTGACGGGCAGCACGACCTGTTCATGGTGCTCAGCCACGGACGGGGTGTGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATCAGTGTGCGCGACGCCGCGGAAGCAGCACGCGTCGAAGCGTGTGGAGCCGCCGTGCAGCGGTGGCGGGCCAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCAGCCGTCTGCCTCTTCCTCCACAGACCACACCCTCGGCACGCCCCCGCCGCCCCACACCCCCGCCGCTTA]
consensusID : consensus_12643#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 145 fasta sequence
[AGCAGCACGCGTCTGAAGTCGTGTGGTGGAGGCACGCCAGTGCAGCGTGCGGCACAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCACCGCCGCCGCA]
[+] EMBL BI810507 [AGCAGCACGCGTCTGAAGTCGTGTGGTGGAGGCACGCCAGTGCAGCGTGCGGCACAAGTTCCCGACGTCCAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGCCGCCACCGCCGCCGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12643#1 GTGCTGAGCAACGAGGAGGTGGTGTCCATCGTGTGCGCGACGCCGCGGAAGCAGCACGCG 60
consensus_12643#3 -------------------------------------------------AGCAGCACGCG 11
consensus_12643#0 ------------------------------------------------------------
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 TC-GAAGGCG-GTGGTGGAGGC-CGCC-GTGCAGCGGTGGCGGGCCAAGTTCCCGACGTC 116
consensus_12643#3 TCTGAAGTCGTGTGGTGGAGGCACGCCAGTGCAGCGT--GCGGCACAAGTTCCCGACGTC 69
consensus_12643#0 ------------------------------------------------------------
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 CAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGC 176
consensus_12643#3 CAGGGTGGACGACTGCTCCGCCGTCTGCCTCTTCCTCCACGACCACACCCTCGGCACGGC 129
consensus_12643#0 ------------------------------------------------------------
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 CGCCGCCGCCTCCGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGTGCGCCAGCGCGTTCGC 236
consensus_12643#3 CGCCACCGCCGCCGCA-------------------------------------------- 145
consensus_12643#0 ------------------------GGAGGAGTGGAGGCAGGCGTGCGCCAGCGCGTTCGC 36
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 CGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGAC 296
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 CGCCATGGACGGCGAGCTCAAGCTCCAGCCGAACCTCGACTGCGCGTTCAGCGGCACGAC 96
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 GGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAG 356
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 GGCGGTGTGCGCCATCAAGCAGGGCAGGGACCTCATCATCGCCAACCTCGGCGACTCGAG 156
consensus_12643#2 -----------------------------------------------------------A 1
consensus_12643#1 GGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGA 416
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 GGCGGTGCTCGCCACCATGTCGGACACCGGCTACCTCCAGGCGGTGCAGCTGACGGTGGA 216
consensus_12643#2 GGCCGTGCTC-CCACCATGTCGGACACCGGCTACCTCCAG-CGGTGCAGCTGACGGTGGA 59
consensus_12643#1 CCA-CAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGT 475
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 CCA-CAAGCCGAGCGTGCCGGAGGAGGCGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGT 275
consensus_12643#2 CCAACAAACCAAGCGTGCCCGAGGAG-CGGCGAGGATCAAGCGGAGCGGGGGGAGGGTGT 118
consensus_12643#1 TCGGGCTGAAGGACGAGCCGGGGGTGATGCGGGTGTGGCTCCCCGGCGAGAACTCGCC-G 534
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 TCGGGCTGAAGGACGAGCCGGGGGTGATGCGGGTGTGGCTCCCCGGCGAGAACTCGCC-G 334
consensus_12643#2 TCGG-CTGAAGGACGAGCCAGGGGTGATGCGGGTGTGGCTGCCCGGGGAGAACTCGCCAG 177
consensus_12643#1 GGGCTCGC-CATGGCGAGGTC-GCTGGGCGACATGAGGCTGAAGC-GGCACGGC-GTGAT 590
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 GGGCTCGC-CATGGCGAGGTC-GCTGGGCGACATGAGGCTGAAGC-GGCACGGC-GTGAT 390
consensus_12643#2 GGGCTCGCACATGGCGAGGTCAGCTGGGCGACATGAGGCTGAAGCAGGCACGGCAGTGAT 237
consensus_12643#1 CCCGGCGC-CGGAGGTGACGTCGCGGCGC-GTGACGGGCGCC--GACCTGTTCATGGTGC 646
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 CCCGGCGC-CGGAGGTGACGTCGCGGCGC-GTGACGGGCGCC--GACCTGTTCATGGTGC 446
consensus_12643#2 CCCGGCGCACGGAGGTGACGTCGCGGCGCAGTGACGGGCAGCACGACCTGTTCATGGTGC 297
consensus_12643#1 TC-GCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATC---GTG 702
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 TC-GCCACGGACGGGGTGTGGGACGTGCTGAGCAACGAGGAGGTGGTGTCCATC-GTGTG 504
consensus_12643#2 TCAGCCACGGACGGGGTGTGG-ACGTGCTGAGCAACGAGGAGGTGGTGTCCATCAGTGTG 356
consensus_12643#1 TGCGACGCCGCGGAAGCAGCACGCACGCCGCCGGCGAGCTGAGGACACAAAGAAGCTCTC 762
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 CGCGACGCCGCGGAAGCAGCACGC-----GTCGAAGGC-GGTGGTGGA-----GGCCGCC 553
consensus_12643#2 CGCGACGCCGCGGAAGCAGCACGC-----GTCGAAGCG-TGTGG---------AGCCGCC 401
consensus_12643#1 GCTCCGGCGAGCTCGATATTGTCCGTGTTTTTGCAGTTTTTGTTGATCTTGATGTGCTGC 822
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 G-TGCAGCGGTGGCG-----GGCCAAGTTCCCGACGTCCAGGGTGGAC--GAC-TGCTCC 604
consensus_12643#2 G-TGCAGCGGTGGCG-----GGCCAAGTTCCCGACGTCCAGGGTGGAC--GAC-TGCTCC 452
consensus_12643#1 AAATACCTACAACCTCCGTCCCATAAAAAACCAAATCCTAGCAATGGACCTGGATATATG 882
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 -GCCGTCTGCCTCTTCCTCCAC------GACCACACCCTCGGCACGGCCGCCGCCGC--- 654
consensus_12643#2 AGCCGTCTGCCTCTTCCTCCACA-----GACCACACCCTCGGCACG-CCCCCGCCGC--- 503
consensus_12643#1 TGTGTCCAGATTCATCGCTGGAATTTGACTCTTTTTTTTTTGGACAGAGAGAGTATGAAT 942
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 --CTC-CGCCGCAGCCGCCGCGGCCGCCAGAAAGGCGCGCAGGGCCTCCACCGCCACGCC 711
consensus_12643#2 --CCCACACCCCCGCCGCTTA--------------------------------------- 522
consensus_12643#1 TAGTAGATAAATATAGTCTATTGTAACATAGTTTAGAGAAGATGGGAAAAAAAGAGAGGC 1002
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 GCCGGCGAGCTGAGGACACAAAGAAGCTCTCGCTCCGGCGAGCTCGATATTGTCCGTGTT 771
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 AATTGCGAAAATGCAAATGTTGCCAAGAAAAGAGAGGGAAAAAAGAAGCTGTTTTTACTT 1062
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 TTTGCAGTTTTTGTTGATCTTGATGTGCTGCAAATACCTACAACCTCCGTCCCATAAAAA 831
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 TTGATGATCATAGTGAGGGGGAGATATTGTAATGGCTGAAGAATGGCAATCAGCCAATCT 1122
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 ACCAAATCCTAGCAATGGACCTGGATATATGTGTGTCCAGATTCATCGCTGGAATTTGAC 891
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 GATGTTGTTTGTGAGATACCAATTGCTTGTTGGCAATTTGGAACTTTGGAATGACATTGT 1182
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 TCTTTTTTTTTTTGGACAGAGAGAGTATGAATTAGTAGATAAATATAGTCTATTGTAACA 951
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 A----------------------------------------------------------- 1183
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 TAGTTTAGAGAAGATGGGAAAAAAAGAGAGGCAATTGCGAAAATGCAAATGTTGCCAAGA 1011
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 ------------------------------------------------------------
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 AAAGAGAGGGAAAAAAGAAGCTGTTTTTACTTTTGATGATCATAGTGAGGGGGAGATATT 1071
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 ------------------------------------------------------------
consensus_12643#3 ------------------------------------------------------------
consensus_12643#0 GTAATGGCTGAAGAATGGCAATCAGCCAATCTGATGTTGTTTGTGAGATACCAATTGCTT 1131
consensus_12643#2 ------------------------------------------------------------
consensus_12643#1 --------------------------------------------------------
consensus_12643#3 --------------------------------------------------------
consensus_12643#0 GTTGGCAATTTGGAACTTTGGAATGACATTGTAAATACCTCGCATAACTTAAAAGG 1187
consensus_12643#2 --------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||