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Oryza sativa
cluster # 12649 cluster # 12649       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12649#0 length = 1227 sequences # 2  
consensus_12649#1 length = 954 sequences # 2  
consensus_12649#2 length = 841 sequences # 7  

consensusID : consensus_12649#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1227
fasta sequence
                              [CCTGCTCATCATCTTCTTCTTCTCCGCTCTCCCTAATCCAAAAAAAGGCGGCTGCTTTGGTCGCTCGCTCGCTCGCGCGGACGTTGGAGGAGAAGCAGCTACCGGGATGGACGCCATGGCCGTGCTCGCGAGGACCTCCCGCCCCGCCCCGACCCTCCTCGCCGCGACCTCCCCCGCGGTGTCCCGGCGCCCGGCGGCCGTCTCCTTCGCCGCCGCCGCCTCCCCGGGGTCCCGCGGCCGCGTCGCGCTGAGCGCCGCGTGGGGCGGGAGGGCGGCCAGGGGGCGCGTCTCCGCCGCCGGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAGCCTGATGGTGTTCAGCGAGGCCTGGTTGGCGAGATTATTTCCCGTTTCGAGAAGAAAGGCTTTGTGTTGAAGGGCTTAAAGCTTTTTCAGTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGGAATGGTGTTGTTGCATCAGCTCGCAAGTTAATAGGAGCTACTAATCCCCTTCAAGCTGAACCAGGGACCATACGGGGCGATCTTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGGCGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGTTCTTGATTTGAGGGGTTATGTATGAGTTCAGATCAGCAGAGTAAAGTAGCTTATACCAAAGCTCGGCCTTCTCATGACTGTACACCCTGACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGTTTGACCGATTACTCTCTGTTGTCAAATCTCCTGGCATGTCTGTAATTGGTTCAGAACAATACCAGCAAAGCTCCAACTTCCAAGTCATTATGCAGATGAATGCGTTCAAAATTATCTCAGGCAGTTGACCGATGACTGATTGTCACTGTTGTACTATAGCTCCCAGCAGAGGTGAACTCGTGCAGAGTTGCAGAGTTCATTTGGCTGATGAGCCATATCTTGATCAGCAGTTATGAAATTGTCACCGTATTGGTGTTCAACCCACAAATGAGGAGGCTAAGGGATAC]

[+] EMBL AK070054             [CCTGCTCATCATCTTCTTCTTCTCCGCTCTCCCTAATCCAAAAAAAGGCGGCTGCTTTGGTCGCTCGCTCGCTCGCGCGGACGTTGGAGGAGAAGCAGCTACCGGGATGGACGCCATGGCCGTGCTCGCGAGGACCTCCCGCCCCGCCCCGACCCTCCTCGCCGCGACCTCCCCCGCGGTGTCCCGGCGCCCGGCGGCCGTCTCCTTCGCCGCCGCCGCCTCCCCGGGGTCCCGCGGCCGCGTCGCGCTGAGCGCCGCGTGGGGCGGGAGGGCGGCCAGGGGGCGCGTCTCCGCCGCCGGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAGCCTGATGGTGTTCAGCGAGGCCTGGTTGGCGAGATTATTTCCCGTTTCGAGAAGAAAGGCTTTGTGTTGAAGGGCTTAAAGCTTTTTCAGTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGGAATGGTGTTGTTGCATCAGCTCGCAAGTTAATAGGAGCTACTAATCCCCTTCAAGCTGAACCAGGGACCATACGGGGCGATCTTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGGCGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGTTCTTGATTTGAGGGGTTATGTATGAGTTCAGATCAGCAGAGTAAAGTAGCTTATACCAAAGCTCGGCCTTCTCATGACTGTACACCCTGACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGTTTGACCGATTACTCTCTGTTGTCAAATCTCCTGGCATGTCTGTAATTGGTTCAGAACAATACCAGCAAAGCTCCAACTTCCAAGTCATTATGCAGATGAATGCGTTCAAAATTATCTCAGGCAGTTGACCGATGACTGATTGTCACTGTTGTACTATAGCTCCCAGCAGAGGTGAACTCGTGCAGAGTTGCAGAGTTCATTTGGCTGATGAGCCATATCTTGATCAGCAGTTATGAAATTGTCACCGTATTGGTGTTCAACCCACAAATGAGGAGGCTAAGGGATAC]
[+] EMBL AK058388             [                                                                                                                                                                                                                                                                                                                                             TATTATGATCAAGCCTGATGGTGTTCAGCGAGGCCTGGTTGGCGAGATTATTTCCCGTTTCGAGAAGAAAGGCTTTGTGTTGAAGGGCTTAAAGCTTTTTCAGTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGGAATGGTGTTGTTGCATCAGCTCGCAAGTTAATAGGAGCTACTAATCCCCTTCAAGCTGAACCAGGGACCATACGGGGCGATCTTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGGCGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGTTCTTGATTTGAGGGGTTATGTATGAGTTCAGATCAGCAGAGTAAAGTAGCTTATACCAAAGCTCGGCCTTCTCATGACTGTACACCCTGACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGT                                                                                                                                                                                                                                                                                               ]


>consensus_12649#0 CCTGCTCATCATCTTCTTCTTCTCCGCTCTCCCTAATCCAAAAAAAGGCGGCTGCTTTGG TCGCTCGCTCGCTCGCGCGGACGTTGGAGGAGAAGCAGCTACCGGGATGGACGCCATGGC CGTGCTCGCGAGGACCTCCCGCCCCGCCCCGACCCTCCTCGCCGCGACCTCCCCCGCGGT GTCCCGGCGCCCGGCGGCCGTCTCCTTCGCCGCCGCCGCCTCCCCGGGGTCCCGCGGCCG CGTCGCGCTGAGCGCCGCGTGGGGCGGGAGGGCGGCCAGGGGGCGCGTCTCCGCCGCCGG CCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAGCCTGATGGTGTTCA GCGAGGCCTGGTTGGCGAGATTATTTCCCGTTTCGAGAAGAAAGGCTTTGTGTTGAAGGG CTTAAAGCTTTTTCAGTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGA AAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGC TTGGGAGGGGAATGGTGTTGTTGCATCAGCTCGCAAGTTAATAGGAGCTACTAATCCCCT TCAAGCTGAACCAGGGACCATACGGGGCGATCTTGCAGTTCAAACAGGAAGGAATGTTGT CCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGG CGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCAGAT CAGTGCAAGAACTGGATGCAGTGCTTGTTCTTGATTTGAGGGGTTATGTATGAGTTCAGA TCAGCAGAGTAAAGTAGCTTATACCAAAGCTCGGCCTTCTCATGACTGTACACCCTGACA TTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGTTTGACCGATTACTCTCTGTT GTCAAATCTCCTGGCATGTCTGTAATTGGTTCAGAACAATACCAGCAAAGCTCCAACTTC CAAGTCATTATGCAGATGAATGCGTTCAAAATTATCTCAGGCAGTTGACCGATGACTGAT TGTCACTGTTGTACTATAGCTCCCAGCAGAGGTGAACTCGTGCAGAGTTGCAGAGTTCAT TTGGCTGATGAGCCATATCTTGATCAGCAGTTATGAAATTGTCACCGTATTGGTGTTCAA CCCACAAATGAGGAGGCTAAGGGATAC



consensusID : consensus_12649#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 954
fasta sequence
                              [TTCTCCGCTCTCCCTAATCCAAAAAAAGGCGGCTGCTTTGGTCGCTCGCTCGCTCGCGCGGACGTTGGAGGAGAAGCAGCTACCGGGATGGACGNCATGGCCGTGCTCGGGAGGGNGGCCAGGGGGCGCGTCTCCNCCGNCGGCCGCATCNNCGCGTCGTCGGTTGAGCAATCCTATATTATNATCAAGCCTGATGGTGTTCAGCGAGGCCTGGTTGGCGAGATTATTTCCCGTTTCGAGAAGAAAGGCTTTGTGTTGAAGGGCTTAAAGCTTTTTCAGTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGGAATGGTGTTGTTGCATCAACTCGCAAGTNAATAAGGAGCTACTAAT-CCCTTCAAGCTGAACCAGGGACCATACGGGGCGATCTTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGGCGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGTTCTTGACTTGAGGGGTTATGTATGAGTCCAGATCAGCAGAGTAAAGTAGCCTATACCAAAGCTCGGCCTTCTCATGACTGTACACCCTGACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGTTTGACCGATTACTCTCTGTTGTCAAATCTCCTGGCATGTCTGTAATTGGTTCAGAACAATACCAGCAAAGCTCCAACTTCCAAGTCATTATGCAGATGAATGTGTTCAGGCTGTGTTTAGATCCAAAGTTTGGTTCCAAACTTCAGTCCTTTTCCATCAAAAAAAAAAAAA]

[+] EMBL OSS16316A            [TTCTCCGCTCTCCCTAATCCAAAAAAAGGCGGCTGCTTTGGTCGCTCGCTCGCTCGCGCGGACGTTGGAGGAGAAGCAGCTACCGGGATGGACGNCATGGCCGTGCTCGGGAGGGNGGCCAGGGGGCGCGTCTCCNCCGNCGGCCGCATCNNCGCGTCGTCGGTTGAGCAATCCTATATTATNATCAAGCCTGATGGTGTTCAGCGAGGCCTGGTTGGCGAGATTATTTCCCGTTTCGAGAAGAAAGGCTTTGTGTTGAAGGGCTTAAAGCTTTTTCAGTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGGAATGGTGTTGTTGCATCAACTCGCAAGTNAATAAGGAGCTACTAAT CCCTTCAAGCTGAACCAGGGACCATACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA998315             [                                                                                                                                                                                                                                                                                                                                                                                                       GGAATGGTGTTGTTGCATCAGCTCGCAAGTTAAT AGGAGCTACTAATCCCCTTCAAGCTGAACCAGGGACCATACGGGGCGATCTTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGGCGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGTTCTTGACTTGAGGGGTTATGTATGAGTCCAGATCAGCAGAGTAAAGTAGCCTATACCAAAGCTCGGCCTTCTCATGACTGTACACCCTGACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGTTTGACCGATTACTCTCTGTTGTCAAATCTCCTGGCATGTCTGTAATTGGTTCAGAACAATACCAGCAAAGCTCCAACTTCCAAGTCATTATGCAGATGAATGTGTTCAGGCTGTGTTTAGATCCAAAGTTTGGTTCCAAACTTCAGTCCTTTTCCATCAAAAAAAAAAAAA]


>consensus_12649#1 TTCTCCGCTCTCCCTAATCCAAAAAAAGGCGGCTGCTTTGGTCGCTCGCTCGCTCGCGCG GACGTTGGAGGAGAAGCAGCTACCGGGATGGACGNCATGGCCGTGCTCGGGAGGGNGGCC AGGGGGCGCGTCTCCNCCGNCGGCCGCATCNNCGCGTCGTCGGTTGAGCAATCCTATATT ATNATCAAGCCTGATGGTGTTCAGCGAGGCCTGGTTGGCGAGATTATTTCCCGTTTCGAG AAGAAAGGCTTTGTGTTGAAGGGCTTAAAGCTTTTTCAGTGCCCCAAGGACTTGGCACAG GAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACT TCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGGAATGGTGTTGTTGCATCAACTCGCAAG TNAATAAGGAGCTACTAATCCCTTCAAGCTGAACCAGGGACCATACGGGGCGATCTTGCA GTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAA ATCGCTCTATGGTTCAAAGAAGGCGAACTCTGCGAATGGGAATCTGTTCTGACACCATGG CTTGTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGTTCTTGACTT GAGGGGTTATGTATGAGTCCAGATCAGCAGAGTAAAGTAGCCTATACCAAAGCTCGGCCT TCTCATGACTGTACACCCTGACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTG CGTTTGACCGATTACTCTCTGTTGTCAAATCTCCTGGCATGTCTGTAATTGGTTCAGAAC AATACCAGCAAAGCTCCAACTTCCAAGTCATTATGCAGATGAATGTGTTCAGGCTGTGTT TAGATCCAAAGTTTGGTTCCAAACTTCAGTCCTTTTCCATCAAAAAAAAAAAAA



consensusID : consensus_12649#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 841
fasta sequence
                              [TACCTCACTAAGGGAATAAGC-TGGGCCGCGTCGCACTGAGCGCCGCGTGGGGCGGGAGGGCGGCCAGGGGGCGCGTCTCCGCCGCCGGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAG-CCTGA-TGGTGTTCA-GCGAGGCCTG-G-TTGGCGA-GATTATTTCCC-GTTTCGA-GA-AGAAAGGCTTTG-TGTTGAAGGGCTTAAA-GCTTTTTCA-GTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGAGATGGTGTTGTTGCATCAGCTCGCAAGTTAATAGGAGCTACTAATCCCCTTCAAGCTGAACCAGGGACCATACGGGGTGATCTTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGACGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGT-TCTTGATTTGAGGGGTTATGTATGAGTTCAGATCAGCAGAGTAAAGTAACTTATACCAAAGCTCGGCCTTCTCATGATTGTACACTCTGACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGTTTGACCGATTACTCTCTGTTGTCAAATNTCCTGGCATGTCTGTAATTGGTTCAGAACAATACCAGCAAAGCTCCAACTTCCAAGTCATTATGCAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BU673308             [TACCTCACTAAGGGAATAAGC TGGGCCGCGTCGCACTGAGCGCCGCGTGGGGCGGGAGGGCGGCCAGGGGGCGCGTCTCCGCCGCCGGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAG CCTGA TGGTGTTCA GCGAGGCCTG G TTGGCGA GATTATTTCCC GTTTCGA GA AGAAAGGCTTTG TGTTGAAGGGCTTAAA GCTTTTTCA GTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGAGATGGTGTTGTTGCATCAGCTCGCAAGTTAATAGGAGCTACTAATCCCCTTCAAGCTGAACCAGGGACCATACGGGGTGATCTTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGACGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGT TCTTGATTTGAGGGGTTCTGTATGAGTTCAGATCCGCAGAGTAAAGTAACTTATACCAAAGGTCGGGCTT                                                                                                                                                                               ]
[+] EMBL CB967404             [        TAAGGGAATAACCTTGGGCTGCGTCGCACTGAGCGCCGCGTGGGGCGGGAGGGCGG CACGGGGCGCGTCTCCGCCGCCGGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAG CCTGACTGGTGTTCACGCGCGGCCTG GATTGGCGACGATTATTTCCCTGTTTCGA GACAGAAAGGCTTTGTTGTTGAAGGGCTTAAACGCTTTTTCATGTGCCCCAAGGta                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BU673076             [          AGGGAAT AGC TTGGGCG GTCGCACTGAGCGCCGTGTGGGGCGGGAGGGCGGCCAGGAGGCGCGTCTCCGCCGCCGGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAGACCTGA TGGTGTTCA GCGAGGCCTGCG TTGGCGA GATTATTTCCC GTTTCGACGA AGAAAGGCTTTG TGTTcgac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB964749             [                   GC TTGGGCGCGT GCACTGAGCGCCGCGTGGGGCGGGAGGGCGGCCA GGGGCGCGTCTCCGCCGCCGGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAG CCTGA TGGTGTTCA GCGAGGCCTG G TTGGCGA GATTATTTCCC GTTTCGA GA AGAAAGGCTTTG TGTTGAAGGGCTTAAA GCTTTTTCA GTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGAGATGGTGTTGTTGCATCAGCTCGCAAGTTAATAGGAGCTACTAATCCCCTTCAAGCTGAACCAGGGACCATACGGGGTGATCTTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTACTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGACGAACTCTGCGATTGGGAATCTGTACTGACACCATGGCTTGTAGAGTAATGCTCACAGATCAGTGCA                                                                                                                                                                                                                                                                           ]
[+] EMBL CB965069             [                             CGTCGCACTGAGCGCCGCGTGGGGCGGGA GGCGGCCA GGGGCGCGTCTCCGCCGCCGGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAG CCTGA TGGTGTTCA GCGAGGCCTG G TTGGCGA GATTATTTCCC GTTTCGA GA AGAAAGGCTTTG TGTTGAAGGGCTTAAA GCTTTTTCA GTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGAGATGGTGTTGTTGCATCAGCTCGCAAGTTAATAGGAGCTACTAATCCCCTTCAAGCTGAACCAGGGACCATACGGGGTGATCTTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGACGAACTCTGAGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGATCCCAGATCAGTAGAAGAACTGGATGCAGTGATTGTAACTTGATATGAGGGGT                                                                                                                                                                                                                                     ]
[+] EMBL CB966778             [                                  CACTGAGCGCCGCGTGGGGCGGGAGGGCGGCCANGGGGCGCGTCTCCGCCGCCGGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAG CCTGA TGGTGTTCA GCGAGGCCTG G TTGGCGA GATTATTTCCC GTTTCGA GA AGAAAGGCTTTG TGTTGAAGGGCTTAAA GCTTTTTCA GTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGAGATGGTGTTGTTGCATCAGCTCGCAAGTTAATAGGAGCTACTAATCCCCTTCAAGCTGAACCAGGGACCATACGGGGTGATCTTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGAAGACGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGT TCTTGATTTGAGGGGTTATGTATGAGTTCAGATCAGCAGAGTAAAGTAACTTATACCAAAGCTCGGCCTTCTCATGATTGTACACTCTGACATTCCCCTTTTTTGTAATACCCAACAT                                                                                                                               ]
[+] EMBL AU174125             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGT TNTTGATTTGAGGGGTTATGTATGAGTTCAGATCAGCAGAGTAAAGTAGCTTATACCAAAGCTCGGCCTTTTCATGACTGTACACCCTGACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGTTTGACCGATTACTCTCTGTTGTCAAATNTCCTGGCATGTCTGTAATTGGTTCAGAACAATACCAGCAAAGCTCCAACTTCCAAGTCATTATGCAAAAAAAAAAAAAAAAAAAA]


>consensus_12649#2 TACCTCACTAAGGGAATAAGCTGGGCCGCGTCGCACTGAGCGCCGCGTGGGGCGGGAGGG CGGCCAGGGGGCGCGTCTCCGCCGCCGGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCT ATATTATGATCAAGCCTGATGGTGTTCAGCGAGGCCTGGTTGGCGAGATTATTTCCCGTT TCGAGAAGAAAGGCTTTGTGTTGAAGGGCTTAAAGCTTTTTCAGTGCCCCAAGGACTTGG CACAGGAGCACTACAAGGATTTGAAGGAAAAACCTTTCTTTCCCGGTCTGATCGAGTACA TAACTTCTGGCCCTGTTGTTTGCATGGCTTGGGAGGGAGATGGTGTTGTTGCATCAGCTC GCAAGTTAATAGGAGCTACTAATCCCCTTCAAGCTGAACCAGGGACCATACGGGGTGATC TTGCAGTTCAAACAGGAAGGAATGTTGTCCATGGAAGTGACAGTCCTGATAACGGCAAGC GTGAAATCGCTCTATGGTTCAAAGAAGACGAACTCTGCGAATGGGAATCTGTTCTGACAC CATGGCTTGTAGAGTAATGCTCCCAGATCAGTGCAAGAACTGGATGCAGTGCTTGTTCTT GATTTGAGGGGTTATGTATGAGTTCAGATCAGCAGAGTAAAGTAACTTATACCAAAGCTC GGCCTTCTCATGATTGTACACTCTGACATTCCCCTTTTTTGTAATACCCAACATTCCCTT TTTTGCGTTTGACCGATTACTCTCTGTTGTCAAATNTCCTGGCATGTCTGTAATTGGTTC AGAACAATACCAGCAAAGCTCCAACTTCCAAGTCATTATGCAAAAAAAAAAAAAAAAAAA A



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12649#0      CCTGCTCATCATCTTCTTCTTCTCCGCTCTCCCTAATCCAAAAAAAGGCGGCTGCTTTGG 60
consensus_12649#2      ------------------------------------------------------------
consensus_12649#1      ------------------------------------------------------------
                                                                                   

consensus_12649#0      TCGCTCGCTCGCTCGCGCGGACGTTGGAGGAGAAGCAGCTACCGGGATGGACGCCATGGC 120
consensus_12649#2      ------------------------------------------------------------
consensus_12649#1      ------------------------------------------------------------
                                                                                   

consensus_12649#0      CGTGCTCGCGAGGACCTCCCGCCCCGCCCCGACCCTCCTCGCCGCGACCTCCCCCGCGGT 180
consensus_12649#2      ------------------------------------------------------------
consensus_12649#1      -------------------------------------TTCTCCGCTCTCCCTAATCCAAA 23
                                                                                   

consensus_12649#0      GTCCCGGCGCCCGGCGGCCGTCTCCTTCGCCGCCGCCG-CCTCCCCGGGGTCC-CGCGGC 238
consensus_12649#2      ---------------------------------TACCT-CACTAAGGGAATAAGCTGGGC 26
consensus_12649#1      AAAAGGCGGCTGCTTTGGTCGCTCGCTCGCTCGCGCGGACGTTGGAGGAGAAGCAGCTAC 83
                                                          *   *      **           *

consensus_12649#0      CGCGTCGCGCTGAGCGCCGCGTGGGGCGGGAGGGCGGCCAGGGGGCGCGTCTCCGCCGCC 298
consensus_12649#2      CGCGTCGCACTGAGCGCCGCGTGGGGCGGGAGGGCGGCCAGGGGGCGCGTCTCCGCCGCC 86
consensus_12649#1      CGGGATGGAC--GNCATGGCCGTGCTCGGGAGGGNGGCCAGGGGGCGCGTCTCCNCCGNC 141
                       ** *  *  *    *   **   *  ******** ******************* *** *

consensus_12649#0      GGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAGCCTGATGGTGTT 358
consensus_12649#2      GGCCGCATCGTCGCGTCGTCGGTTGAGCAATCCTATATTATGATCAAGCCTGATGGTGTT 146
consensus_12649#1      GGCCGCATCNNCGCGTCGTCGGTTGAGCAATCCTATATTATNATCAAGCCTGATGGTGTT 201
                       *********  ****************************** ******************

consensus_12649#0      CAGCGAGGCCTGGTTGGCGAGATTATTTCCCGTTTCGAGAAGAAAGGCTTTGTGTTGAAG 418
consensus_12649#2      CAGCGAGGCCTGGTTGGCGAGATTATTTCCCGTTTCGAGAAGAAAGGCTTTGTGTTGAAG 206
consensus_12649#1      CAGCGAGGCCTGGTTGGCGAGATTATTTCCCGTTTCGAGAAGAAAGGCTTTGTGTTGAAG 261
                       ************************************************************

consensus_12649#0      GGCTTAAAGCTTTTTCAGTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAG 478
consensus_12649#2      GGCTTAAAGCTTTTTCAGTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAG 266
consensus_12649#1      GGCTTAAAGCTTTTTCAGTGCCCCAAGGACTTGGCACAGGAGCACTACAAGGATTTGAAG 321
                       ************************************************************

consensus_12649#0      GAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATG 538
consensus_12649#2      GAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATG 326
consensus_12649#1      GAAAAACCTTTCTTTCCCGGTCTGATCGAGTACATAACTTCTGGCCCTGTTGTTTGCATG 381
                       ************************************************************

consensus_12649#0      GCTTGGGAGGGGAATGGTGTTGTTGCATCAGCTCGCAAGTTAATA-GGAGCTACTAATCC 597
consensus_12649#2      GCTTGGGAGGGAGATGGTGTTGTTGCATCAGCTCGCAAGTTAATA-GGAGCTACTAATCC 385
consensus_12649#1      GCTTGGGAGGGGAATGGTGTTGTTGCATCAACTCGCAAGTNAATAAGGAGCTACTAATCC 441
                       ***********  ***************** ********* **** **************

consensus_12649#0      CCTTCAAGCTGAACCAGGGACCATACGGGGCGATCTTGCAGTTCAAACAGGAAGGAATGT 657
consensus_12649#2      CCTTCAAGCTGAACCAGGGACCATACGGGGTGATCTTGCAGTTCAAACAGGAAGGAATGT 445
consensus_12649#1      C-TTCAAGCTGAACCAGGGACCATACGGGGCGATCTTGCAGTTCAAACAGGAAGGAATGT 500
                       * **************************** *****************************

consensus_12649#0      TGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGA 717
consensus_12649#2      TGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGA 505
consensus_12649#1      TGTCCATGGAAGTGACAGTCCTGATAACGGCAAGCGTGAAATCGCTCTATGGTTCAAAGA 560
                       ************************************************************

consensus_12649#0      AGGCGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCA 777
consensus_12649#2      AGACGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCA 565
consensus_12649#1      AGGCGAACTCTGCGAATGGGAATCTGTTCTGACACCATGGCTTGTAGAGTAATGCTCCCA 620
                       ** *********************************************************

consensus_12649#0      GATCAGTGCAAGAACTGGATGCAGTGCTTGTTCTTGATTTGAGGGGTTATGTATGAGTTC 837
consensus_12649#2      GATCAGTGCAAGAACTGGATGCAGTGCTTGTTCTTGATTTGAGGGGTTATGTATGAGTTC 625
consensus_12649#1      GATCAGTGCAAGAACTGGATGCAGTGCTTGTTCTTGACTTGAGGGGTTATGTATGAGTCC 680
                       ************************************* ******************** *

consensus_12649#0      AGATCAGCAGAGTAAAGTAGCTTATACCAAAGCTCGGCCTTCTCATGACTGTACACCCTG 897
consensus_12649#2      AGATCAGCAGAGTAAAGTAACTTATACCAAAGCTCGGCCTTCTCATGATTGTACACTCTG 685
consensus_12649#1      AGATCAGCAGAGTAAAGTAGCCTATACCAAAGCTCGGCCTTCTCATGACTGTACACCCTG 740
                       ******************* * ************************** ******* ***

consensus_12649#0      ACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGTTTGACCGATTACTCTCT 957
consensus_12649#2      ACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGTTTGACCGATTACTCTCT 745
consensus_12649#1      ACATTCCCCTTTTTTGTAATACCCAACATTCCCTTTTTTGCGTTTGACCGATTACTCTCT 800
                       ************************************************************

consensus_12649#0      GTTGTCAAATCTCCTGGCATGTCTGTAATTGGTTCAGAACAATACCAGCAAAGCTCCAAC 1017
consensus_12649#2      GTTGTCAAATNTCCTGGCATGTCTGTAATTGGTTCAGAACAATACCAGCAAAGCTCCAAC 805
consensus_12649#1      GTTGTCAAATCTCCTGGCATGTCTGTAATTGGTTCAGAACAATACCAGCAAAGCTCCAAC 860
                       ********** *************************************************

consensus_12649#0      TTCCAAGTCATTATGCAGATGAATGCGTTCAAAATTATCTCAGGCAGTTGACCGATGACT 1077
consensus_12649#2      TTCCAAGTCATTATGCAAAAAAAAAAAAAAAAAAAA------------------------ 841
consensus_12649#1      TTCCAAGTCATTATGCAGATGAATGTGTTCAGGCTGTGTTTAGATCCAAAGTTTGGTTCC 920
                       ***************** *  **       *                             

consensus_12649#0      GATTGTCACTGTTGTACTATAGCTCCCAGCAGAGGTGAACTCGTGCAGAGTTGCAGAGTT 1137
consensus_12649#2      ------------------------------------------------------------
consensus_12649#1      AAACTTCAGTCCTTTTCCATCAAAAAAAAAAAAA-------------------------- 954
                                                                                   

consensus_12649#0      CATTTGGCTGATGAGCCATATCTTGATCAGCAGTTATGAAATTGTCACCGTATTGGTGTT 1197
consensus_12649#2      ------------------------------------------------------------
consensus_12649#1      ------------------------------------------------------------
                                                                                   

consensus_12649#0      CAACCCACAAATGAGGAGGCTAAGGGATAC 1227
consensus_12649#2      ------------------------------
consensus_12649#1      ------------------------------
                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)