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Oryza sativa
cluster # 12661 cluster # 12661       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12661#0 length = 1431 sequences # 9  
consensus_12661#1 length = 741 sequences # 2  

consensusID : consensus_12661#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1431
fasta sequence
                              [TCGACGGCAGCTTACTTTGAGAGCCTTGGTAGGATGAGCTCCGCGGCCATGAAGCTCGCCGTGGTGGCCGCGCTCATCTCGGCCGCCGCCGTGGGCGCCCGCGCCTGCCTCGACGTCGGCTTCTACGACACGACGTGCCCGACGGCGGAGACGCTCATACAGCAGGTCGTCGCCGCCGCCTTCCGCAACGACTCCGGCGTCGCGCCGG-CCATGATCCGCATGCATTTCCACGACTGCTTCGTCAGGGGCTGCGACGGCTCGGTGCTGATCGACACCGTGCCGGGGTCGACGACGAGGGCGGAGAAGGACGCCGCGCCAAACAACCCGAGCCTCCGGTTC-TT-CGACGTGATCGACCGCGCCAAGTCGGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACGTCGTCGCCTTCATGGCGCGGGACGGCGTCGTGCTGTCCGGCGGCCTCGGCTACCAGGTGCCCGCGGGGCGGCGCGACGGCCGGACCTCCCTCGAGGACGACGCGCTCAACTTCCTGCCGCCGCCAACGTCCACCGCCGCCGACCTCGTCGCCAACTTCACCGCCAAGAACCTCACCGCCGAGGACATGGTCGTCCTCTCCGGCGCCCACACCATCGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATCTACAACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTCTTGCTGAAGGGCATCTGTCCGCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTCATGGACATCCTGACGCCGACCAAGTTCGACAACAGGTACTACGTCGGGCTGACAAACAACCTCGGCCTCTTCCAGTCGGACGCGGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTGAACTCCTTCGTGCGCAGCGAGGCGACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAGATGGGGCAGATCGGCGTGCTGTCCGGGACGCAGGGCGAGAT-CAGGCTCAACTGCAGGGTCGTCAACCCTGTCAATGTCACTGCTACTGCAGCTGATGATCACCACCTTACTTCCTCTTCCTCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCACTGCTTGTTAGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATGATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGATCTTGTTTACCTGATGTAGGTGTTGGTGGTTGATACTGTCACCATCTTGTGCTTGTCAGTCTGAAAAATAAATTGTTGCATCCAGCATGAACTGGTGTCAGATGTTGTTCTTGGGGCCTGTTCATATTGTTAACCTTGCACATAAGATTGGCAAATAAAAATGGCTATTGATCAGCATTT]

[+] EMBL AK102154             [TCGACGGCAGCTTACTTTGAGAGCCTTGGTAGGATGAGCTCCGCGGCCATGAAGCTCGCCGTGGTGGCCGCGCTCATCTCGGCCGCCGCCGTGGGCGCCCGCGCCTGCCTCGACGTCGGCTTCTACGACACGACGTGCCCGACGGCGGAGACGCTCATACAGCAGGTCGTCGCCGCCGCCTTCCGCAACGACTCCGGCGTCGCGCCGG CCATGATCCGCATGCATTTCCACGACTGCTTCGTCAGGGGCTGCGACGGCTCGGTGCTGATCGACACCGTGCCGGGGTCGACGACGAGGGCGGAGAAGGACGCCGCGCCAAACAACCCGAGCCTCCGGTTC TT CGACGTGATCGACCGCGCCAAGTCGGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACGTCGTCGCCTTCATGGCGCGGGACGGCGTCGCGCTGTCCGGCGGCCTCGGCTACCAGGTGCCCGCGGGGCGGCGCGACGGCCGGACCTCCCTCGAGGACGACGCGCTCAACTTCCTGCCGCCGCCAACGTCCACCGCCGCCGACCTCGTCGCCAACTTCACCGCCAAGAACCTCACCGCCGAGGACATGGTCGTCCTCTCCGGCGCCCACACCATCGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATCTACAACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTCTTGCTGAAGGGCATCTGTCCGCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTCATGGACATCCTGACGCCGACCAAGTTCGACAACAGGTACTACGTCGGGCTGACAAACAACCTCGGCCTCTTCCAGTCGGACGCGGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTGAACTCCTTCGTGCGCAGCGAGGCGACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAGATGGGGCAGATCGGCGTGCTGTCCGGGACGCAGGGCGAGAT CAGGCTCAACTGCAGGGTCGTCAACCCTGTCAATGTCACTGCTACTGCAGCTGATGATCACCACCTTACTTCCTCTTCCTCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCACTGCTTGTTAGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATGATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGATCTTGTTTACCTGATGTAGGTGTTGGTGGTTGATACTGTCACCATCTTGTGCTTGTCAGTCTGAAAAATAAATT                                                                                                          ]
[+] EMBL AK067416             [ CGACGGCAGCTTACTTTGAGAGCCTTGGTAGGATGAGCTCCGCGGCCATGAAGCTCGCCGTGGTGGCCGCGCTCATCTCGGCCGCCGCCGTGGGCGCCCGCGCCTGCCTCGACGTCGGCTTCTACGACACGACGTGCCCGACGGCGGAGACGCTCATACAGCAGGTCGTCGCCGCCGCCTTCCGCAACGACTCCGGCGTCGCGCCGG CCATGATCCGCATGCATTTCCACGACTGCTTCGTCAGGGGCTGCGACGGCTCGGTGCTGATCGACACCGTGCCGGGGTCGACGACGAGGGCGGAGAAGGACGCCGCGCCAAACAACCCGAGCCTCCGGTTC TT CGACGTGATCGACCGCGCCAAGTCGGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACGTCGTCGCCTTCATGGCGCGGGACGGCGTCGTGCTGTCCGGCGGCCTCGGCTACCAGGTGCCCGCGGGGCGGCGCGACGGCCGGACCTCCCTCGAGGACGACGCGCTCAACTTCCTGCCGCCGCCAACGTCCACCGCCGCCGACCTCGTCGCCAACTTCACCGCCAAGAACCTCACCGCCGAGGACATGGTCGTCCTCTCCGGCGCCCACACCATCGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATCTACAACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTCTTGCTGAAGGGCATCTGTCCGCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTCATGGACATCCTGACGCCGACCAAGTTCGACAACAGGTACTACGTCGGGCTGACAAACAACCTCGGCCTCTTCCAGTCGGACGCGGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTGAACTCCTTCGTGCGCAGCGAGGCGACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAGATGGGGCAGATCGGCGTGCTGTCCGGGACGCAGGGCGAGAT CAGGCTCAACTGCAGGGTCGTCAACCCTGTCAATGTCACTGCTACTGCAGCTGATGATCACCACCTTACTTCCTCTTCCTCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCACTGCTTGTTAGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATGATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGATCTTGTTTACCTGATGTAGGTGTTGGTGGTTGATACTGTCACCATCTTGTGCTTGTCAGTCTGAAAAATAAATTGTTGCATCCAGCATG                                                                                           ]
[+] EMBL CA753810             [              CTTTGAGAGCCTTGGTAGGATGAGCTCCGCGGCCATGAAGCTCGCCGTGGTGGCCGCGCTCATCTCGGCCGCCGCCGTGGGCGCCCGCGCCTGCCTCGACGTCGGCTTCTACGACACGACGTGCCCGACGGCGGAGACGCTCATACAGCAGGTCGTCGCCGCCGCCTTCCGCAACGACTCCGGCGTCGCGCCGG CCATGATCCGCATGCATTTCCACGACTGCTTCGTCAGGGGCTGCGACGGCTCGGTGCTGATCGACACCGTGCCGGGGTCGACGACGAGGGCGGAGAAGGACGCCGCGCCAAACAACCCGAGCCTCCGGTTC TT CGACGTGATCGACCGCGCCAAGTCGGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACGTCGTCGCCTTCATGGCGCGGGACGGCGTCGTGCTGTCCGGCGGCCTCGGCTACCAGGTGCCCGCGGGGCGGCGCGACGGCCGGACCTCCCTCGAGGACGACGCGCTCAACTTCCTGCCGCCGCCAACGTCCACCGCCGCCGACCTCGTCGCCAACTTCACCGCCGAGAACCTCACCGCCGAGGACATGGTCGTCCTCTCCGGCGCCCACACCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU181231             [               TTTGAGAGCCTTGGTAGGATGAGCTCCGCGGCCATGAAGCTCGCCGTGGTGGCCGCGCTCATCTCGGCCGCCGCCGTGGGCGCCCGCGCCTGCCTCGACGTCGGCTTCTACGACACGACGTGCCCGACGGTGGAGACGCTCATACAGCAGGTCGTCGCCGCCGCCTTCCGCAACGACTCCGGCGTCGCGCCGG CCATGATCCGCATGCATTTCCACGACTGCTTCGTCAGGGGCTGCGACGGCTCGGTGCTGATCGACACCGTGCCGGGGTCGACGACGAGGGCGGAGAAGGACGCCGCGCCAAACAACCCGAGCCTCCGGTTCTTT CGACGTGATCGACCGCGCCAAGTCGGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACGTCGTCGCCTTCATGGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C96956               [                           GGTAGGATGAGCTCCGCGACCATGAAGCTCGCCGTGGTGGCCGCGCTCATCTCGGCCGCCGCCGTGGGCGCCCGCGCCTGCCTCGACGTCGGCTTCTACGACACGACGTGCCCGANGGCGGAGACGCTCATACAGCAGGTCGTCGCCGCCGCCTTCCGCAACGACTCCGGCGTCGCGCCGGACCATGATCCGCATGCATTTCCACGACTGCTTCGTCAGGGGCTGCGACGGCTCGGTGCTGATCGACACCGTGCCGGGGTCGACGACGAGGGCGGAGAAGGACGNCGNGCCAAACAACCCGAGCCTCCGGTTC TTNCGACGTGATCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB650454             [                                                                                              GCGCCCGCGCCTGCCTCGACGTCGGCTTCTACGACACGACGTGCCCGACGGCGGAGACGCTCATACAGCAGGTCGTCGCCGCCGCCTTCCGCAACGACTCCGGCGTCGCGCCGG CCATGATCCGCATGCATTTCCACGACTGCTTCGTCAGGGGCTGCGACGGCTCGGTGCTGATCGACACCGTGCCGGGGTCGACGACGAGGGCGGAGAAGGACGCCGCGCCAAACAACCCGAGCCTCCGGTTC TT CGACGTGATCGACCGCGCCAAGTCGGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACGTCGTCGCCTTCATGGCGCGGGACGGCGTCGTGCTGTCCGGCGGCCTCGGCTACCAGGTGCCCGCGGGGCGGCGCGACGGCCGGACCTCCCTCGAGGACGACGCGCTCAACTTCCTGCCGCCGCCAACGTCCACCGCCGCCGACCTCGTCGCCAACTTCACCGCCAAGAACCTCACCGCCGAGGACATGGTCGTCCTCTCCGGCGCCCACACCATCGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATCTACAACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTCTTGCTGAAGGGCATCTGTCCGCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTCATGGACATCCTGACGCCGACCAAGTTCGACAACAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB653561             [                                                                                              GCGCCCGCGCCTGCCTCGACGTCGGCTTCTACGACACGACGTGCCCGACGGCGGAGACGCTCATACAGCAGGTCGTCGCCGCCGCCTTCCGCAACGACTCCGGCGTCGCGCCGG CCATGATCCGCATGCATTTCCACGACTGCTTCGTCAGGGGCTGCGACGGCTCGGTGCTGATCGACACCGTGCCGGGGTCGACGACGAGGGCGGAGAAGGACGCCGCGCCAAACAACCCGAGCCTCCGGTTC TT CGACGTGATCGACCGCGCCAAGTCGGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACGTCGTCGCCTTCATGGCGCGGGACGGCGTCGTGCTGTCCGGCGGCCTCGGCTACCAGGTGCCCGCGGGGCGGCGCGACGGCCGGACCTCCCTCGAGGACGACGCGCTCAACTTCCTGCCGCCGCCAACGTCCACCGCCGCCGACCTCATCGCCAACTTCACCGCCAAGAACCTCACCGCCGAGGACATGGTCGTCCTCTCCGGCGCCCACACCATCGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATCTACAACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTCTTGCTGAAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C96957               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACTCCTTCACCAATCGCATCTAC ACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGCCGTACGCGTTCTTGCTGAAGGGCATCTGTCCNCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTCATGGACATCCTGACGCCGACCAAGTTCGACAACAGGTACTACNTCGGGCTGACAAACAACCTCGGCCTCTTCCAGTCGGACGCGGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTGAACTCCTTCGTGCGCAGCGAGGCGACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAGATGGGGCAGATCGGCGTGCTGTCCGGGACGCAGGGCGAGATCCAGGCTCAACTGCAGGGTCGTCAACCCTGTCAATGTCACTGCTACTGCAGCTGATGATCACCACCTTACTTCCTCTTCCTCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCACTGCTTGTTAGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATGATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGATCTTGTTTACCTGATGTAGGTGTTGGTGGTTGATACTGTCACCATCTTGTGCTTGTCAGTCTGAAAAATAAATTGTTGCATCCAGCAaaaa                                                                                         ]
[-] EMBL CB647818             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCCGTCGTTGAGCAAGGCGTACGCGTTCTTGCTGAAGGGCATCTGTCCGCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTCATGGACATCCTGACGCCGACCAAGTTCGACAACAGGTACTACGTCGGGCTGACAAACAACCTCGGCCTCTTCCAGTCGGACGCGGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTGAACTCCTTCGTGCGCAGCGAGGCGACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAGATGGGGCAGATCGGCGTGCTGTCCGGGACGCAGGGCGAGAT CAGGCTCAACTGCAGGGTCGTCAACCCTGTCAATGTCACTGCTACTGCAGCTGATGATCACCACCTTACTTCCTCTTCCTCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCACTGCTTGTTAGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATGATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGATCTTGTTTACCTGATGTAGGTGTTGGTGGTTGATACTGTCACCATCTTGTGCTTGTCAGTCTGAAAAATAAATTGTTGCATCCAGCATGCACTGGTGTCAGATGTTGTTCTTGGGGCCTGTTCATATTGTTAACCTTGCACATAAGATTGGCAAATAAAAATGGCTATTGATCAGCATTT]


>consensus_12661#0 TCGACGGCAGCTTACTTTGAGAGCCTTGGTAGGATGAGCTCCGCGGCCATGAAGCTCGCC GTGGTGGCCGCGCTCATCTCGGCCGCCGCCGTGGGCGCCCGCGCCTGCCTCGACGTCGGC TTCTACGACACGACGTGCCCGACGGCGGAGACGCTCATACAGCAGGTCGTCGCCGCCGCC TTCCGCAACGACTCCGGCGTCGCGCCGGCCATGATCCGCATGCATTTCCACGACTGCTTC GTCAGGGGCTGCGACGGCTCGGTGCTGATCGACACCGTGCCGGGGTCGACGACGAGGGCG GAGAAGGACGCCGCGCCAAACAACCCGAGCCTCCGGTTCTTCGACGTGATCGACCGCGCC AAGTCGGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACGTCGTCGCCTTC ATGGCGCGGGACGGCGTCGTGCTGTCCGGCGGCCTCGGCTACCAGGTGCCCGCGGGGCGG CGCGACGGCCGGACCTCCCTCGAGGACGACGCGCTCAACTTCCTGCCGCCGCCAACGTCC ACCGCCGCCGACCTCGTCGCCAACTTCACCGCCAAGAACCTCACCGCCGAGGACATGGTC GTCCTCTCCGGCGCCCACACCATCGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATC TACAACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTC TTGCTGAAGGGCATCTGTCCGCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTC ATGGACATCCTGACGCCGACCAAGTTCGACAACAGGTACTACGTCGGGCTGACAAACAAC CTCGGCCTCTTCCAGTCGGACGCGGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTG AACTCCTTCGTGCGCAGCGAGGCGACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAG ATGGGGCAGATCGGCGTGCTGTCCGGGACGCAGGGCGAGATCAGGCTCAACTGCAGGGTC GTCAACCCTGTCAATGTCACTGCTACTGCAGCTGATGATCACCACCTTACTTCCTCTTCC TCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCACTGCTTGTT AGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATG ATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGATCTTGTTTA CCTGATGTAGGTGTTGGTGGTTGATACTGTCACCATCTTGTGCTTGTCAGTCTGAAAAAT AAATTGTTGCATCCAGCATGAACTGGTGTCAGATGTTGTTCTTGGGGCCTGTTCATATTG TTAACCTTGCACATAAGATTGGCAAATAAAAATGGCTATTGATCAGCATTT



consensusID : consensus_12661#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 741
fasta sequence
                              [CGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATCTACAACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTCTTGCTGAAGGGCATCTGTCCGCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTCATGGACATCCTGACGCCGACCAAGTTCGACAACAGGTACTACGTCGGGCTGACAAACAACCTCGGCCTCTTCCAGTCGGACGCGGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTGAACTCCTTCGTGCGCAGCGAGGCGACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAGATGGGGCAGATCGGCGTGCTGTCCGGGACGCAGGGCGAGATCAGGCTCAACTGCAGGGTCGTCAACCCTGTCAATGTCACTGCTACTGCAGCTGATGATCACCACCTTACTTCCTCTTCCTCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCACTGCTTGTTAGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATGATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGA-TCTTGTTTACCTGATGTAGGTGTTGGTGGTTGATACTGTCACCA-TCTTGTGCTTGTCAGTCTGAAAAAGAAATTGTTGCATCCAGCATGCACTGGTGTCAAAAAAAAAGAAAA]

[-] EMBL CB650455             [CGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATCTACAACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTCTTGCTGAAGGGCATCTGTCCGCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTCATGGACATCCTGACGCCGACCAAGTTCGACAACAGGTACTACGTCGGGCTGACAAACAACCTCGGCCTCTTCCAGTCGGACGCGGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTGAACTCCTTCGTGCGCAGCGAGGCGACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAGATGGGGCAGATCGGCGTGCTGTCCGGGACGCAGGGCGAGATCAGGCTCAACTGCAGGGTCGTCAACCCTGTCAATGTCACTGCTACTGCAGCTGATGATCACCACCTTACTTCCTCTTCCTCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCACTGCTTGTTAGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATGATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGA TCTTGTTTACCTGATGTAGGTGTTGGTGGTTGATACTGTCACCA TCTTGTGCTTGTCAGTCTGAAAAAGAAATTGTTGCATCCAGCATGCACTGGTGTCAAAAAAAAAGA   ]
[+] EMBL AU181230             [                                                                                                                                                                                                                                                                                                                                                                                                                                               ATGATCNCCACCTTACTTCCTCTTCCTCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCNCTGCTTGTTAGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATGATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGATTCTTGTTTACCTGATGTAGGTGTTGGTGGTTGATACTGTCACCATTCTTGTGCTTGTCAGTCTGAAAAATAAATTGTTGCATCCAGCATGCACTGGTGTCAAAAAAAAAAAAAA]


>consensus_12661#1 CGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATCTACAACTTCCCCAACACAACCGA TGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTCTTGCTGAAGGGCATCTGTCCGCC GAACAGCAACCAGACGTTCCCGACGACGACCACCTTCATGGACATCCTGACGCCGACCAA GTTCGACAACAGGTACTACGTCGGGCTGACAAACAACCTCGGCCTCTTCCAGTCGGACGC GGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTGAACTCCTTCGTGCGCAGCGAGGC GACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAGATGGGGCAGATCGGCGTGCTGTC CGGGACGCAGGGCGAGATCAGGCTCAACTGCAGGGTCGTCAACCCTGTCAATGTCACTGC TACTGCAGCTGATGATCACCACCTTACTTCCTCTTCCTCCTCTTCTTCAGATGAAGTGGC TGCAAGCTAATTAATTAACTGATTACCACTGCTTGTTAGTAGGTGTGCATGCACAGACAG TGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATGATTAGATGCTTCAATTGTTTGTT GCAGTTACAGTGATTGAGAGACATCAGATCTTGTTTACCTGATGTAGGTGTTGGTGGTTG ATACTGTCACCATCTTGTGCTTGTCAGTCTGAAAAAGAAATTGTTGCATCCAGCATGCAC TGGTGTCAAAAAAAAAGAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12661#0      TCGACGGCAGCTTACTTTGAGAGCCTTGGTAGGATGAGCTCCGCGGCCATGAAGCTCGCC 60
consensus_12661#1      ------------------------------------------------------------
                                                                                   

consensus_12661#0      GTGGTGGCCGCGCTCATCTCGGCCGCCGCCGTGGGCGCCCGCGCCTGCCTCGACGTCGGC 120
consensus_12661#1      ------------------------------------------------------------
                                                                                   

consensus_12661#0      TTCTACGACACGACGTGCCCGACGGCGGAGACGCTCATACAGCAGGTCGTCGCCGCCGCC 180
consensus_12661#1      ------------------------------------------------------------
                                                                                   

consensus_12661#0      TTCCGCAACGACTCCGGCGTCGCGCCGGCCATGATCCGCATGCATTTCCACGACTGCTTC 240
consensus_12661#1      ------------------------------------------------------------
                                                                                   

consensus_12661#0      GTCAGGGGCTGCGACGGCTCGGTGCTGATCGACACCGTGCCGGGGTCGACGACGAGGGCG 300
consensus_12661#1      ------------------------------------------------------------
                                                                                   

consensus_12661#0      GAGAAGGACGCCGCGCCAAACAACCCGAGCCTCCGGTTCTTCGACGTGATCGACCGCGCC 360
consensus_12661#1      ------------------------------------------------------------
                                                                                   

consensus_12661#0      AAGTCGGCCGTCGAGGCGGCGTGCCCGGGCGTCGTCTCCTGCGCCGACGTCGTCGCCTTC 420
consensus_12661#1      ------------------------------------------------------------
                                                                                   

consensus_12661#0      ATGGCGCGGGACGGCGTCGTGCTGTCCGGCGGCCTCGGCTACCAGGTGCCCGCGGGGCGG 480
consensus_12661#1      ------------------------------------------------------------
                                                                                   

consensus_12661#0      CGCGACGGCCGGACCTCCCTCGAGGACGACGCGCTCAACTTCCTGCCGCCGCCAACGTCC 540
consensus_12661#1      ------------------------------------------------------------
                                                                                   

consensus_12661#0      ACCGCCGCCGACCTCGTCGCCAACTTCACCGCCAAGAACCTCACCGCCGAGGACATGGTC 600
consensus_12661#1      ------------------------------------------------------------
                                                                                   

consensus_12661#0      GTCCTCTCCGGCGCCCACACCATCGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATC 660
consensus_12661#1      -----------------------CGGCGTCTCCCACTGCGACTCCTTCACCAATCGCATC 37
                                              *************************************

consensus_12661#0      TACAACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTC 720
consensus_12661#1      TACAACTTCCCCAACACAACCGATGGAATTGATCCGTCGTTGAGCAAGGCGTACGCGTTC 97
                       ************************************************************

consensus_12661#0      TTGCTGAAGGGCATCTGTCCGCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTC 780
consensus_12661#1      TTGCTGAAGGGCATCTGTCCGCCGAACAGCAACCAGACGTTCCCGACGACGACCACCTTC 157
                       ************************************************************

consensus_12661#0      ATGGACATCCTGACGCCGACCAAGTTCGACAACAGGTACTACGTCGGGCTGACAAACAAC 840
consensus_12661#1      ATGGACATCCTGACGCCGACCAAGTTCGACAACAGGTACTACGTCGGGCTGACAAACAAC 217
                       ************************************************************

consensus_12661#0      CTCGGCCTCTTCCAGTCGGACGCGGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTG 900
consensus_12661#1      CTCGGCCTCTTCCAGTCGGACGCGGCGCTGCTGACGGACGCCGCGCTCAAGGCCACGGTG 277
                       ************************************************************

consensus_12661#0      AACTCCTTCGTGCGCAGCGAGGCGACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAG 960
consensus_12661#1      AACTCCTTCGTGCGCAGCGAGGCGACGTTCCGGCTCAAGTTCGCCAGGGCCATGATCAAG 337
                       ************************************************************

consensus_12661#0      ATGGGGCAGATCGGCGTGCTGTCCGGGACGCAGGGCGAGATCAGGCTCAACTGCAGGGTC 1020
consensus_12661#1      ATGGGGCAGATCGGCGTGCTGTCCGGGACGCAGGGCGAGATCAGGCTCAACTGCAGGGTC 397
                       ************************************************************

consensus_12661#0      GTCAACCCTGTCAATGTCACTGCTACTGCAGCTGATGATCACCACCTTACTTCCTCTTCC 1080
consensus_12661#1      GTCAACCCTGTCAATGTCACTGCTACTGCAGCTGATGATCACCACCTTACTTCCTCTTCC 457
                       ************************************************************

consensus_12661#0      TCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCACTGCTTGTT 1140
consensus_12661#1      TCCTCTTCTTCAGATGAAGTGGCTGCAAGCTAATTAATTAACTGATTACCACTGCTTGTT 517
                       ************************************************************

consensus_12661#0      AGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATG 1200
consensus_12661#1      AGTAGGTGTGCATGCACAGACAGTGATTGAGATGTGTGTGAAGTTCAGTGTGATGAGATG 577
                       ************************************************************

consensus_12661#0      ATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGATCTTGTTTA 1260
consensus_12661#1      ATTAGATGCTTCAATTGTTTGTTGCAGTTACAGTGATTGAGAGACATCAGATCTTGTTTA 637
                       ************************************************************

consensus_12661#0      CCTGATGTAGGTGTTGGTGGTTGATACTGTCACCATCTTGTGCTTGTCAGTCTGAAAAAT 1320
consensus_12661#1      CCTGATGTAGGTGTTGGTGGTTGATACTGTCACCATCTTGTGCTTGTCAGTCTGAAAAAG 697
                       *********************************************************** 

consensus_12661#0      AAATTGTTGCATCCAGCATGAACTGGTGTCAGATGTTGTTCTTGGGGCCTGTTCATATTG 1380
consensus_12661#1      AAATTGTTGCATCCAGCATGCACTGGTGTCAAAAAAAAAGAAAA---------------- 741
                       ******************** ********** *                           

consensus_12661#0      TTAACCTTGCACATAAGATTGGCAAATAAAAATGGCTATTGATCAGCATTT 1431
consensus_12661#1      ---------------------------------------------------
                                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)