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Oryza sativa
cluster # 12663 cluster # 12663       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12663#0 length = 1416 sequences # 10  
consensus_12663#1 length = 800 sequences # 1  

consensusID : consensus_12663#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1416
fasta sequence
                              [GGGGATCTCGCANTCTGTGCGGCGGCGGTGCTTCTCGTCCGGCNGCGGCGTCTGTTGCCGGTATTAGGAAGCCAACGTTGAGACGTCTTCCTTCGGTCCCAATCTCACACACCATGACAGGAAAGAGATCGACCTCGACCTCGACCTCGACCTC-GACCTCGAGTAAGCGAGGATGCAGTGCTACTCGTACGGCGACGGCGGGGTCAATCGCCGGTGTAGATCACAATACGTACCATTGTCTAATAGTCTTAGTTCTGTT-TGAGACGCCCTCTGGCTTCGCAATGTTCGGTATGAGTGGGGACAGACTCATTCAACCAAATGCCCTGCAGGAAATCTGGGCAAACTTTGGCGTGGACTATAGGGTATCCAAATTCATTTGGCTGAAGGAATTTCGAGAAATCAAGGACAAGTCCAGTGCCATTAATCATGATACTGGTGTCAGTTGCGACCTTGCTGAGATGATCATGAAGTGGCATCACCCTGGGCAGAAAATGGCCGTTGAAAAACCCGAATATAAAGAAATCATTGAAAGAAGCTTGAGTGTGCCCTGCATGTTTGATGAAATTGTGATGGAAGTGATGTGGGGCCTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAAAAATGAAGTTGAGCAAGGACGACTACCTCCCAATGAGCCAAGGATTGTACATGCTCCTTAACCGCTATGGTTTGGATGTC-AAACCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCGAATACTGTGATGTGAAAAACTCCAAGCACTTGCGCTGGACTGGTGAATA-CATTGAGAAACGGTCTGGCATTAAATGTTTAGACTGGGATTTGATGAAACTTGCTACGGGTATTAAGATCATATGTTACCCCACAGAAAGATCTACAGCTGAGGAAGCGATGTTTACACAAGATGAGCTGTCGAAGTTAGTGAAGGATGCACATAAGTATGAAGGGAAGATCCGTAAGAGATCTTTCATGAATGCCTACAGCGAGATGGTTGAAGCCCGTCAACTTATTCCTATGGCACAAAAACAACTGGAGGACTTGGTAAA-GGAGGCCAAAGATGCATGTGAAGCTGAACAAAGCACATGAACGCAATAAGCCAGTCAGTAGCATGAGAGAAGAACACAGTCGCATGAGAGAAGAACTCAGTCGCCAAGAATATCACATTTCCTTAAGGGAGAACTGGTTTTGAAATCCTATCCTGGACACTGGATGGTGAGGCTGCCTGAAGCTGCCATCCTGGACCAAAGCGTTGCATTCGTGTGTTTTTCTCTGTTTAATTATCGA-CAATGGGAACTCACTAGTAATTCGACCAGCGTTATCTACTCTTGATTGCTTTTGATGTTTCTTTTCCTATCAAATAGTTAAACTTCAGGTTCTCGAAAAAAAA]

[+] EMBL CB096681             [GGGGATCTCGCANTCTGTGCGGCGGCGGTGCTTCTCGTCCGGCNGCGGCGTCTGTTGCCGGTATTAGGAAGCCAACGTTGAGACGTCTTCCTTCGGTCCCAATCTCACACACCATGACAGGAAAGAGA      TCGACCTCGACCTCGACCTC GACCTCGAGTAAGCGAGGATGCAGTGCTACTCGCACGGCGACGGNGGGGTCAATCGCCGGTGTNGATCACAATACGTACCATTGNCTAATAGTCTTAGTTCTGTT TGAGACGCCCTCTGGCTTCGCAATGTTCGGTATGAGTGGNGACAGACTCATTCAACCAAATGCCCTGCAGGAAATCTGGGCAAACTTTGNCGTGGACTATAGGGTATCCAAATTCATTTGGCTGAAGGAATTTCAAGAAATCAAGGACAAGTCCAGTGCCATTAATCATGATACTGGTGTCANTTGCGACCTTGCTGAGATGATCATGAAGTGGCATCACCCTGGGCAGAAAATGGCCGTTGAAAAACCCGNATNTAAAGAAATCATTGAAAGAAGCTTGAGTGTGCCCTGCATGTTTGATGAAATTGTGATGNAAGTGATGTGGGGCCTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAANAATGAAGTTGAGCAAGGACGACTACCTCCCAATGAGCCAAGGATTGGACATGCTCCTTAACCGCTATGGCTTGGATGTC AAACCAGAGATGGCTACTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCNAATACTGGGATGTGNAAAACTTCAAGCACTTGCGCTGGACTGGCGAATA CATTGAGNAACGGNCTGGCATTNAATGNTTANACTGNGATTTGATGAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU225332             [                gccgctCGGAGGTGCTTCTCGTCCGGCAGCGGCGTCTGTTGCCGGTATTAGGAAGCCAACGTTGAGACGTCTTCCTTCGGTCCCAATCTCACACACCATGACAGGAAAGAGATCGACCTCGACCTCGACCTCGACCTCGGACCTCGAGTAAGCGAGGATGCAGTGCTACTCGTACGGCGACGGCGGGGTCAATCGCCGGTGTAGATCACAATACGTACCATTGTCTAATAGTCTTAGTTCTGTTGTGAGACGCTCTCTGGCTTCGCAATGTTCGGTATGAGTGGGGACAGACTCATTCAACCAAATGCCCTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK071145             [                                                CGTCTGTTGCCGGTATTAGGAAGCCAACGTTGAGACGTCTTCCTTCGGTCCCAATCTCACACACCATGACAGGAAAGAGATCGACCTCGACCTCGACCTCGACCTC GACCTCGAGTAAGCGAGGATGCAGTGCTACTCGTACGGCGACGGCGGGGTCAATCGCCGGTGTAGATCACAATACGTACCATTGTCTAATAGTCTTAGTTCTGTT TGAGACGCCCTCTGGCTTCGCAATGTTCGGTATGAGTGGGGACAGACTCATTCAACCAAATGCCCTGCAGGAAATCTGGGCAAACTTTGGCGTGGACTATAGGGTATCCAAATTCATTTGGCTGAAGGAATTTCGAGAAATCAAGGACAAGTCCAGTGCCATTAATCATGATACTGGTGTCAGTTGCGACCTTGCTGAGATGATCATGAAGTGGCATCACCCTGGGCAGAAAATGGCCGTTGGAAAACCCGAATATAAAGAAATCATTGAAAGAAGCTTGAGTGTGCCCTGCATGTTTGATGAAATTGTGATGGAAGTGATGTGGGGCCTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAAAAATGAAGTTGAGCAAGGACGACTACCTCCCAATGAGCCAAGGATTGTACATGCTCCTTAACCGCTATGGTTTGGATGTC AAACCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCGAATACTGTGATGTGAAAAACTCCAAGCACTTGCGCTGGACTGGTGAATA CATTGAGAAACGGTCTGGCATTAAATGTTTAGACTGGGATTTGATGAAACTTGCTACGGGTATTAAGATCATATGTTACCCCACAGAAAGATCTACAGCTGAGGAAGCGATGTTTACACAAGATGAGCTGTCGAAGTTAGTGAAGGATGCACATAAGTATGAAGGGAAGATCCGTAAGAGATCTTTCATGAATGCCTACAGCGAGATGGTTGAAGCCCGTCAACTTATTCCTATGGCACAAAAACAACTGGAGGACTTGGTAAA GGAGGCCAAAGATGCATGTGAAGCTGAACAAAGCACATGAACGCAATAAGCCAGTCAGTAGCATGAGAGAAGAACACAGTCGCATGAGAGAAGAACTCAGTCGCCAAGAATATCACATTTCCTTAAGGGAGAACTGGGTTTGAAATCCTATCCTGGACACTGGATGGTGAGGCTGCCTGAAGCTGCCATCCTGGACCAAAGCGTTGCATTCGTGTGTTTTTCTCTGTTTAATTATCGA CAATGGGAACTCACTAGTAATTCGACCAGCGTTATCTACTCTTGATTGCTTTTGATGTTTCTTTTCCTATCAAATAGTTAAACTT                  ]
[+] EMBL AU068736             [                                                                                                                    ACAGGAAAGAGATCGACCTCGACCTCGACCTCGACCTC GACCTCGAGTAAGCGAGGATGCAGTGCTACTCGTACGGCGACGGCGGGGTCAATCGCCGGTGTAGATCACAATACGTACCATTGTCTAATAGTCTTAGTTCTGTT TGAGACGCCCTCTGGCTTCGCAATGTTCGGTATGAGTGGGGACAGACTCATTCAACCAAATGCCCTGCAGGAAATCTGGGCAAACTTTGGCGTGGACTATAGGGTATCCAAATTCATTTGGCTGAAGGAATTTCGAGAAATCAAGGACAAGTCCAGTGCCATTAATCATGATACTGGTGTCAGTTGCGACCTTGCTGAGATGATCATGAAGTGGCATCACCCTGGGCAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSR08872A            [                                                                                                                                                                                                                                                                                                                                                                                                                                    CATTAATCATGATACTGGTGTCAGTTGCGACCTTGCTGAGATGATCATGAAGTGGCATCACCCTGGGCAGAAAATGGCCNTTGGAAAACCCGAATATAAAGAAATCATTGAAAGAAGCTTGAGTGTGCCCTGCATGTTTGATGAAATTGTGATGGAAGTGATGTGGGGCCTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAAAAATGAAGTTGAGCAAGGACGACTACCTCCCAATGAGCCAAGGATTGTACATGCTCCTTAACCGCTATGGTTTGGATGTC AAACCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCGAATACTGTGATGTGAAAAACTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB621452             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCCGTGAAAAAACCCGAATATAAAGAAATCATTGAAAGAAGCTTGAGTGTGCCCTGCATGTTTGATGAAATTGTGATGGAAGTGATGTGGGGCCTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAAAAATGAAGTTGAGCAAGGACGACTACCTCCCAATGAGCCAAGGATTGTACATGCTCCTTAACCGCTATGGTTTGGATGTC AAACCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCGAATACTGTGATGTGAAAAACTCCAAGCACTTGCGCTGGACTGGTGAATA CATTGAGAAACGGTCTGGCATTAAATGTTTAGACTGGGATTTGATGAAACTTGCTACGGGTATTAAGATCATATGTTACCCCACAGAAAGATCTACAGCTGAGGAAGCGATGTTTACACAAGATGAGCTGTCGAAGTTAGTGAAGGATGCACATAAGTATGAAGGGAAGATCCGTAAGAGATCTTTCATGAATGCCTACAGCGAGATGGTTGAAGCCCGTCAACTTATTCCTATGGCACAAAAACAACTGGAGGACTTGGTAAA GGAGGCCAAAGATGCATGTGAAGCTGAACAAAGCACATGAACGCAATAAGCCAGTCAGTAGCATGAGAGAAGAACACAGTCGCATGAGAGAAGAACTCAGTCGCCAAGAATATCACATTTCCTTAAGGGAGAACTGGTTTTGAAATCCTATCCTGGACACTGGATGGTGAGGCTGCCTGAAGCTGCCATCCTGGACCAAAGCGTTGCATTCGTGTGTTTTTCTCTGTTTAATTATCGA CAATGGGAACTCACTAGTAATTCGACCA                                                                           ]
[-] EMBL CB635786             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGGAAGTGATGTGGGGCCTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAAAAATGAAGTTGAGCAAGGACGACTACCTCCCAATGAGCCAAGGATTGTACATGCTCCTTAACCGCTATGGTTTGGATGTC AAACCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCGAATACTGTGATGTGAAAAACTCCAAGCACTTGCGCTGGACTGGTGAATA CATTGAGAAACGGTCTGGCATTAAATGTTTAGACTGGGATTTGATGAAACTTGCTACGGGTATTAAGATCATATGTTACCCCACAGAAAGATCTACAGCTGAGGAAGCGATGTTTACACAAGATGAGCTGTCGAAGTTAGTGAAGGATGCACATAAGTATGAAGGGAAGATCCGTAAGAGATCTTTCATGAATGCCTACAGCGAGATGGTTGAAGCCCGTCAACTTATTCCTATGGCACAAAAACAACTGGAGGACTTGGTAAA GGAGGCCAAAGATGCATGTGAAGCTGAACAAAGCACATGAACGCAATAAGCCAGTCAGTAGCATGAGAGAAGAACACAGTCGCATGAGAGAAGAACTCAGTCGCCAAGAATATCACATTTCCTTAAGGGAGAACTGGTTTTGAAATCCTATCCTGGACACTGGATGGTGAGGCTGCCTGAAGCTGCCATCCTGGACCAAAGCGTTGCATTCGTGTGTTTTTCTCTGTTTAATTATAGAGCAATGGGAACTCACTAGTAATTCGACCAGCGTTAaaaaaaaga                                                            ]
[+] EMBL AU068737             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTCNAAACCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCGAATACTGTGATGTGAAAAACTCCAAGCACTTGCGCTGGACTGGTGAATACCATTGAGAAACGGTCTGGCATTAAATGTTTAGACTGGGATTTGATGAAACTTGCTACGGGTATTAAGATCATATGTTACCCCACAGAAAGATCTACAGCTGAGGAAGCGATGTTTACACAAGATGAGCTGTCGAAGTTAGTGAAGGATGCACATAAGTATGAAGGGAAGATCCGTAAGAGATCTTTCATGAATGCCTACAGCGAGATGGTTGAAGCCCGTCAACTTATTCCTATGGCACAAAAACAACTGGAGGACTTGGTAAA GGAGGCCAAAGATGCATGTGAAGCTGAACAAAGCACATGAACGCAATAAGCCAGTCAGTAGCATGAGAGAAGAACACAGTCGCATGAGAGAAGAACTCAGTCGCCAAGAATATCACATTTCCTTAAGGGAGAACTGGTTTTGAAATCCTATCCTGGACACTGGATGGTGAGGCTGCCTGAAGCTGCCATCCTGGACCAAAGCGTTGCATTCGTGTGTTTTTCTCTGTTTAATTATCGA CAATGGGAACTCACTAGTAATTCGACCAGCGTTATCTACTCTTGATTGCTTTTaaaaaa                                            ]
[+] EMBL BI797184             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GAAAAACTCCAACCACTTGCGCT GACTGGTGAATA CATTGAGAAACGTTCTGCCATTAAATGTTTAGACTGGGATTTGATGAAACTTGCTACGGGTATTAAGATCATATGTTACCCCACAGAAAGATCTACAGCTGAGGAAGCGATGTTTACACAAGATGAGCTGTCGAAGTTAGTGAAGGATGCACATAAGTATGAAGGGAAGATCCGTAAGAGATCTTTCATGAATGCCTACAGCGAGATGGTTGAAGCCCGTCAACTTATTCCTATGGCACAAAAAC ACTGGAGGACTTGGTAAA GGAGGCC AAGATGCATGTGAAGCTGAAC AAGCACATGAACGCAATAAGCCAGTCAGTAGCATGAGAGAAGAACACAGTCGCATGAGAGAAGAACTCAGTCGCCAAGAATATCACATTTCCTTAAGGGAGAACTGGTTTTGAAATCCTATCCTGGACACTGGATGGTGAGGCTGCCTGAAGCTGCCATCCTGGACCAAAGCGTTGCATTCGTGTGTTTTTCTCTGTTTAATTATCGA CCATGGGAACTCACTAGTAATTCGACCAGCGTTATCTACTCTTGATTGCTTTTGATGTTTCTTTTCCTATC AATAGTTAAACTTCAGGTTCTCGAAAAAAAA]
[+] EMBL AU031724             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GATGCACATAAGTATGAAGGGAAGATCCGTAAGAGATCTTTCATGAATGCCTACAGCGAGATGGTTGAANCCCGTCAACTTATTCCTATGGCACAAAAACAACTGGAGGACTTGGTAAAGGGAGGCCAAAGATGCATGTGAAGCTGAACAAAGCACATGAACGCAATAAGCCAGTCAGTAGCATGAGAGAAGAACACAGTCGCATGAGAGAAGAACTCAGTCGCCAAGAATATCACATTTCCTTAAGGGAGAACTGGTTTTGAAATCCTATCCTGGACACTGGATGGTGAGGCTGCCTGAAGCTGCCATCCTGGACCAAAGCGNTGCATTCGTGTGTTTTNCTCTGTTTAATTATCGA CAATGGNAACTCACTAGTAATTCGACCAGCGTTATCTAaaaca                                                            ]


>consensus_12663#0 GGGGATCTCGCANTCTGTGCGGCGGCGGTGCTTCTCGTCCGGCNGCGGCGTCTGTTGCCG GTATTAGGAAGCCAACGTTGAGACGTCTTCCTTCGGTCCCAATCTCACACACCATGACAG GAAAGAGATCGACCTCGACCTCGACCTCGACCTCGACCTCGAGTAAGCGAGGATGCAGTG CTACTCGTACGGCGACGGCGGGGTCAATCGCCGGTGTAGATCACAATACGTACCATTGTC TAATAGTCTTAGTTCTGTTTGAGACGCCCTCTGGCTTCGCAATGTTCGGTATGAGTGGGG ACAGACTCATTCAACCAAATGCCCTGCAGGAAATCTGGGCAAACTTTGGCGTGGACTATA GGGTATCCAAATTCATTTGGCTGAAGGAATTTCGAGAAATCAAGGACAAGTCCAGTGCCA TTAATCATGATACTGGTGTCAGTTGCGACCTTGCTGAGATGATCATGAAGTGGCATCACC CTGGGCAGAAAATGGCCGTTGAAAAACCCGAATATAAAGAAATCATTGAAAGAAGCTTGA GTGTGCCCTGCATGTTTGATGAAATTGTGATGGAAGTGATGTGGGGCCTGAAGAATCTGA TGCATGTTTTAGTACCCCAAGAAAAAATGAAGTTGAGCAAGGACGACTACCTCCCAATGA GCCAAGGATTGTACATGCTCCTTAACCGCTATGGTTTGGATGTCAAACCAGAGATGGTTA CTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCGAATACTGTGATGTGAAAA ACTCCAAGCACTTGCGCTGGACTGGTGAATACATTGAGAAACGGTCTGGCATTAAATGTT TAGACTGGGATTTGATGAAACTTGCTACGGGTATTAAGATCATATGTTACCCCACAGAAA GATCTACAGCTGAGGAAGCGATGTTTACACAAGATGAGCTGTCGAAGTTAGTGAAGGATG CACATAAGTATGAAGGGAAGATCCGTAAGAGATCTTTCATGAATGCCTACAGCGAGATGG TTGAAGCCCGTCAACTTATTCCTATGGCACAAAAACAACTGGAGGACTTGGTAAAGGAGG CCAAAGATGCATGTGAAGCTGAACAAAGCACATGAACGCAATAAGCCAGTCAGTAGCATG AGAGAAGAACACAGTCGCATGAGAGAAGAACTCAGTCGCCAAGAATATCACATTTCCTTA AGGGAGAACTGGTTTTGAAATCCTATCCTGGACACTGGATGGTGAGGCTGCCTGAAGCTG CCATCCTGGACCAAAGCGTTGCATTCGTGTGTTTTTCTCTGTTTAATTATCGACAATGGG AACTCACTAGTAATTCGACCAGCGTTATCTACTCTTGATTGCTTTTGATGTTTCTTTTCC TATCAAATAGTTAAACTTCAGGTTCTCGAAAAAAAA



consensusID : consensus_12663#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 800
fasta sequence
                              [AAAAGGCAAAATACTCCCCCCCTCCCCCCAACCTCCACATCTCGCAATCTGTGCGGCGGCGGTGCTTCTCGTCCGGCAGCGGCGTCTGTTGCCGGTATTAGGAAGCCAACGTTGAGACGTCTTCCTTCGGTCCCAATCTCACACACCATGACAGGAAAGAGATCGACCTCGACCTCGACCTCGACCTCGAGTAAGCGAGGATGCAGTGCTACTCGTACGGCGACGGCGGGGTCAATCGCCGGTGTAGATCACAATACGTACCATTGTCTAATAGTCTTAGTTCTGTTTGAGACGCCCTCTGGCTTCGCAATGTTCGGTATGAGTGGGGACAGACTCATTCAACCAAATGCCCTGCAGGAAATCTGGGCAAACTTTGGCGTGGACTATAGGGTATCCAAAGAATTTCAAGAAATCAAGGACAAGTCCAGTGCCATTAATCATGATACTGGTGTCAGTTGCGACCTTGCTGAGATGATCATGAAGTGGCATCACCCTGGGCAGAAAATGGCCGTTGAAAAACCCGAATATAAAGAAATCATTGAAAGAAGCTTGAGTGTGCCCTGCATGTTTGATGAAATTGTGATGGAAGTGATGTGGGGCCTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAAAAATGAAGTTGAGCAAGGACGACTACCTCCCAATGAGCCAAGGATTGTACATGCTCCTTAACCGCTATGGTTTGGATGTNCAACCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCGAATACTGTGATGTGAAAAACTCCAA]

[+] EMBL CB635785             [AAAAGGCAAAATACTCCCCCCCTCCCCCCAACCTCCACATCTCGCAATCTGTGCGGCGGCGGTGCTTCTCGTCCGGCAGCGGCGTCTGTTGCCGGTATTAGGAAGCCAACGTTGAGACGTCTTCCTTCGGTCCCAATCTCACACACCATGACAGGAAAGAGATCGACCTCGACCTCGACCTCGACCTCGAGTAAGCGAGGATGCAGTGCTACTCGTACGGCGACGGCGGGGTCAATCGCCGGTGTAGATCACAATACGTACCATTGTCTAATAGTCTTAGTTCTGTTTGAGACGCCCTCTGGCTTCGCAATGTTCGGTATGAGTGGGGACAGACTCATTCAACCAAATGCCCTGCAGGAAATCTGGGCAAACTTTGGCGTGGACTATAGGGTATCCAAAGAATTTCAAGAAATCAAGGACAAGTCCAGTGCCATTAATCATGATACTGGTGTCAGTTGCGACCTTGCTGAGATGATCATGAAGTGGCATCACCCTGGGCAGAAAATGGCCGTTGAAAAACCCGAATATAAAGAAATCATTGAAAGAAGCTTGAGTGTGCCCTGCATGTTTGATGAAATTGTGATGGAAGTGATGTGGGGCCTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAAAAATGAAGTTGAGCAAGGACGACTACCTCCCAATGAGCCAAGGATTGTACATGCTCCTTAACCGCTATGGTTTGGATGTNCAACCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCGAATACTGTGATGTGAAAAACTCCAA]


>consensus_12663#1 AAAAGGCAAAATACTCCCCCCCTCCCCCCAACCTCCACATCTCGCAATCTGTGCGGCGGC GGTGCTTCTCGTCCGGCAGCGGCGTCTGTTGCCGGTATTAGGAAGCCAACGTTGAGACGT CTTCCTTCGGTCCCAATCTCACACACCATGACAGGAAAGAGATCGACCTCGACCTCGACC TCGACCTCGAGTAAGCGAGGATGCAGTGCTACTCGTACGGCGACGGCGGGGTCAATCGCC GGTGTAGATCACAATACGTACCATTGTCTAATAGTCTTAGTTCTGTTTGAGACGCCCTCT GGCTTCGCAATGTTCGGTATGAGTGGGGACAGACTCATTCAACCAAATGCCCTGCAGGAA ATCTGGGCAAACTTTGGCGTGGACTATAGGGTATCCAAAGAATTTCAAGAAATCAAGGAC AAGTCCAGTGCCATTAATCATGATACTGGTGTCAGTTGCGACCTTGCTGAGATGATCATG AAGTGGCATCACCCTGGGCAGAAAATGGCCGTTGAAAAACCCGAATATAAAGAAATCATT GAAAGAAGCTTGAGTGTGCCCTGCATGTTTGATGAAATTGTGATGGAAGTGATGTGGGGC CTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAAAAATGAAGTTGAGCAAGGACGAC TACCTCCCAATGAGCCAAGGATTGTACATGCTCCTTAACCGCTATGGTTTGGATGTNCAA CCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGCTTCTTGCTTGATTGCGAATAC TGTGATGTGAAAAACTCCAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12663#0      ----------------------------------GGGGATCTCGCANTCTGTGCGGCGGC 26
consensus_12663#1      AAAAGGCAAAATACTCCCCCCCTCCCCCCAACCTCCACATCTCGCAATCTGTGCGGCGGC 60
                                                             ******** *************

consensus_12663#0      GGTGCTTCTCGTCCGGCNGCGGCGTCTGTTGCCGGTATTAGGAAGCCAACGTTGAGACGT 86
consensus_12663#1      GGTGCTTCTCGTCCGGCAGCGGCGTCTGTTGCCGGTATTAGGAAGCCAACGTTGAGACGT 120
                       ***************** ******************************************

consensus_12663#0      CTTCCTTCGGTCCCAATCTCACACACCATGACAGGAAAGAGATCGACCTCGACCTCGACC 146
consensus_12663#1      CTTCCTTCGGTCCCAATCTCACACACCATGACAGGAAAGAGATCGACCTCGACCTCGACC 180
                       ************************************************************

consensus_12663#0      TCGACCTCGACCTCGAGTAAGCGAGGATGCAGTGCTACTCGTACGGCGACGGCGGGGTCA 206
consensus_12663#1      TCGACCTCGA------GTAAGCGAGGATGCAGTGCTACTCGTACGGCGACGGCGGGGTCA 234
                       **********      ********************************************

consensus_12663#0      ATCGCCGGTGTAGATCACAATACGTACCATTGTCTAATAGTCTTAGTTCTGTTTGAGACG 266
consensus_12663#1      ATCGCCGGTGTAGATCACAATACGTACCATTGTCTAATAGTCTTAGTTCTGTTTGAGACG 294
                       ************************************************************

consensus_12663#0      CCCTCTGGCTTCGCAATGTTCGGTATGAGTGGGGACAGACTCATTCAACCAAATGCCCTG 326
consensus_12663#1      CCCTCTGGCTTCGCAATGTTCGGTATGAGTGGGGACAGACTCATTCAACCAAATGCCCTG 354
                       ************************************************************

consensus_12663#0      CAGGAAATCTGGGCAAACTTTGGCGTGGACTATAGGGTATCCAAATTCATTTGGCTGAAG 386
consensus_12663#1      CAGGAAATCTGGGCAAACTTTGGCGTGGACTATAGGGTATCCAAA--------------- 399
                       *********************************************               

consensus_12663#0      GAATTTCGAGAAATCAAGGACAAGTCCAGTGCCATTAATCATGATACTGGTGTCAGTTGC 446
consensus_12663#1      GAATTTCAAGAAATCAAGGACAAGTCCAGTGCCATTAATCATGATACTGGTGTCAGTTGC 459
                       ******* ****************************************************

consensus_12663#0      GACCTTGCTGAGATGATCATGAAGTGGCATCACCCTGGGCAGAAAATGGCCGTTGAAAAA 506
consensus_12663#1      GACCTTGCTGAGATGATCATGAAGTGGCATCACCCTGGGCAGAAAATGGCCGTTGAAAAA 519
                       ************************************************************

consensus_12663#0      CCCGAATATAAAGAAATCATTGAAAGAAGCTTGAGTGTGCCCTGCATGTTTGATGAAATT 566
consensus_12663#1      CCCGAATATAAAGAAATCATTGAAAGAAGCTTGAGTGTGCCCTGCATGTTTGATGAAATT 579
                       ************************************************************

consensus_12663#0      GTGATGGAAGTGATGTGGGGCCTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAAAA 626
consensus_12663#1      GTGATGGAAGTGATGTGGGGCCTGAAGAATCTGATGCATGTTTTAGTACCCCAAGAAAAA 639
                       ************************************************************

consensus_12663#0      ATGAAGTTGAGCAAGGACGACTACCTCCCAATGAGCCAAGGATTGTACATGCTCCTTAAC 686
consensus_12663#1      ATGAAGTTGAGCAAGGACGACTACCTCCCAATGAGCCAAGGATTGTACATGCTCCTTAAC 699
                       ************************************************************

consensus_12663#0      CGCTATGGTTTGGATGTCAAACCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGC 746
consensus_12663#1      CGCTATGGTTTGGATGTNCAACCAGAGATGGTTACTGACTCTATTATTAAGCTGGCATGC 759
                       *****************  *****************************************

consensus_12663#0      TTCTTGCTTGATTGCGAATACTGTGATGTGAAAAACTCCAAGCACTTGCGCTGGACTGGT 806
consensus_12663#1      TTCTTGCTTGATTGCGAATACTGTGATGTGAAAAACTCCAA------------------- 800
                       *****************************************                   

consensus_12663#0      GAATACATTGAGAAACGGTCTGGCATTAAATGTTTAGACTGGGATTTGATGAAACTTGCT 866
consensus_12663#1      ------------------------------------------------------------
                                                                                   

consensus_12663#0      ACGGGTATTAAGATCATATGTTACCCCACAGAAAGATCTACAGCTGAGGAAGCGATGTTT 926
consensus_12663#1      ------------------------------------------------------------
                                                                                   

consensus_12663#0      ACACAAGATGAGCTGTCGAAGTTAGTGAAGGATGCACATAAGTATGAAGGGAAGATCCGT 986
consensus_12663#1      ------------------------------------------------------------
                                                                                   

consensus_12663#0      AAGAGATCTTTCATGAATGCCTACAGCGAGATGGTTGAAGCCCGTCAACTTATTCCTATG 1046
consensus_12663#1      ------------------------------------------------------------
                                                                                   

consensus_12663#0      GCACAAAAACAACTGGAGGACTTGGTAAAGGAGGCCAAAGATGCATGTGAAGCTGAACAA 1106
consensus_12663#1      ------------------------------------------------------------
                                                                                   

consensus_12663#0      AGCACATGAACGCAATAAGCCAGTCAGTAGCATGAGAGAAGAACACAGTCGCATGAGAGA 1166
consensus_12663#1      ------------------------------------------------------------
                                                                                   

consensus_12663#0      AGAACTCAGTCGCCAAGAATATCACATTTCCTTAAGGGAGAACTGGTTTTGAAATCCTAT 1226
consensus_12663#1      ------------------------------------------------------------
                                                                                   

consensus_12663#0      CCTGGACACTGGATGGTGAGGCTGCCTGAAGCTGCCATCCTGGACCAAAGCGTTGCATTC 1286
consensus_12663#1      ------------------------------------------------------------
                                                                                   

consensus_12663#0      GTGTGTTTTTCTCTGTTTAATTATCGACAATGGGAACTCACTAGTAATTCGACCAGCGTT 1346
consensus_12663#1      ------------------------------------------------------------
                                                                                   

consensus_12663#0      ATCTACTCTTGATTGCTTTTGATGTTTCTTTTCCTATCAAATAGTTAAACTTCAGGTTCT 1406
consensus_12663#1      ------------------------------------------------------------
                                                                                   

consensus_12663#0      CGAAAAAAAA 1416
consensus_12663#1      ----------
                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)