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Oryza sativa
cluster # 12679 cluster # 12679       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12679#0 length = 1682 sequences # 9  
consensus_12679#1 length = 625 sequences # 2  

consensusID : consensus_12679#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1682
fasta sequence
                              [TCCCATCTCCCAGTCCTATCGCGTAGCCCACACTCCACCCTATCGCGCCTTCTCTTCCATCGCCACGGCCCACACTCTGCCGAGCGCGTCTCGATCCCCTCCGCCTTCTCTCCCGTCCTCCTCCTGCCGAGCCACGCCGTGCCTTCCCGATCTCCTCCACGTTCTCTCCCATCCTCATCCCTCCGAGCCGTGCCGTGCCTTCCGGTCGCGCCCGACGCCACCCCTTCCCATCCCCTTCCTTTTTTCCTCTCACCACTCCCGATATGATCGATTAAATCCAATAGGATGTGAAGTTCATCTTGATTCAGCTGTGGGGGTTGAGGGGAGGGGAAGCTCGACAGTCGGCTGGAGTTAACCTCATTAGGGT-GTGGTTGTTGAGGGGATAGAGTGCAGCCAAGGGAAACATCCCGTCGGGCAAGACCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAGTTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCAC-C-ACGGAGCGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAATCCTCAATC-TGAACAAACGA-TTTCCCTCCGCCGGTCGACATCGTCAT-GGTCTCCACCTGAAGCCGCATGATAC-AATCTGCGTAC-AACTCCTGCACGGCAGAACTAACTCAAGATGGCTGGTGGTCGCACCTATTGGGACAAAGCCCTCACAAAGATATTCCTCGACTTATGCATTGCTGAGAAGACAAAGCGCAATCACAACAAGAAGGGTCGTACCAACATAGGTTGGCAGAATTTATATCGCAATTTCAGAGAACAATCAGGCAAGAACTATGACAGTAAACAGCTTCAAAACAAATTTAGCACCTTTAAGAGACAATACAAGCTATGGAAGAGCCTAAAGAATAAGAGCGGAGGTGGGTGGGAC-AACAATTCTAGCACCATAAGGTGCGATGATGATTGGTGGGAAGACCGTATT-GAGGAGAATAGGGATGCCAGACAGTTCCGTGGAAAGCCGCTTGAACATGAGGATGAGCTGACTACTCATTTTGGTTGCATGGACACCGAAGAAGGTACAATGTTGTGCGTAGGTGGTATTGGCAAGAGAACACCAAGCAGTGGAAGCGATGACAACCTTACTCCGATGTCTAACGACAATGTCGGCTTGTCTAGTGC-TGGCC-GTGT-GGCTTAAAGGGCAGGGAAGGAGCAGGTGGTTGACCGCCCACCACCCAAGAAGAG-TAAAAATATGGAGTACTATGT-AGGGT-GCGTATCAGAGAGTATGCTCGAAAGAAGCAGGAATGAAAGCAGTGTGCTCAGGGGAGAGCAAGATGAGATAAAAGAATTGCTGCAACTTGTAGAAGAGGATGGTGTGGCTCAAGGATCTGAGTTGTATTTCATAGCTACTGACCTATTTAGGTCAGCTGCACGATGGGCAGCTTTTAGGTGTATTTACCCTGCAGAGAATCGTAAAGCATGGCTCCGATGGACTTGGGACAATGCTAGGAAAAAGTGATACCAGTCCATGCTTAGTTGTCGCACACGGTGTTTGATTGTATATACCCATCGCCAACACGACGTGGCATTATGTAATCGGTTGTTTGACCTTGGCATACTCTTATGTTATGCATTATGACCTTATTTGCTTTGCTACTTTATCAAAAAAA]

[+] EMBL AK068483             [TCCCATCTCCCAGTCCTATCGCGTAGCCCACACTCCACCCTATCGCGCCTTCTCTTCCATCGCCACGGCCCACACTCTGCCGAGCGCGTCTCGATCCCCTCCGCCTTCTCTCCCGTCCTCCTCCTGCCGAGCCACGCCGTGCCTTCCCGATCTCCTCCACGTTCTCTCCCATCCTCATCCCTCCGAGCCGTGCCGTGCCTTCCGGTCGCGCCCGACGCCACCCCTTCCCATCCCCTTCCTTTTTTCCTCTCACCACTCCCGATATGATCGATTAAATCCAATAGGATGTGAAGTTCATCTTGATTCAGCTGTGGGGGTTGAGGGGAGGGGAAGCTCGACAGTCGGCTGGAGTTAACCTCATTAGGGT GTGGTTGTTGAGGGGATAGAGTGCAGCCAAGGGAAACATCCCGTCGGGCAAGACCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAGTTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCAC C ACGGAGCGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAATCCTCAATC TGAACAAACGA TTTCCCTCCGCCGGTCGACATCGTCAT GGTCTCCACCTGAAGCCGCATGATAC AATCTGCGTAC AACTCCTGCACGGCAGAACTAACTCAAGATGGCTGGTGGTCGCACCTATTGGGACAAAGCCCTCACAAAGATATTCCTCGACTTATGCATTGCTGAGAAGACAAAGCGCAATCACAACAAGAAGGGTCGTACCAACATAGGTTGGCAGAATTTATATCGCAATTTCAGAGAACAATCAGGCAAGAACTATGACAGTAAACAGCTTCAAAACAAATTTAGCACCTTTAAGAGACAATACAAGCTATGGAAGAGCCTAAAGAATAAGAGCGGAGGTGGGTGGGAC AACAATTCTAGCACCATAAGGTGCGATGATGATTGGTGGGAAGACCGTATT GAGGAGAATAGGGATGCCAGACAGTTCCGTGGAAAGCCGCTTGAACATGAGGATGAGCTGACTACTCATTTTGGTTGCATGGACACCGAAGAAGGTACAATGTTGTGCGTAGGTGGTATTGGCAAGAGAACACCAAGCAGTGGAAGCGATGACAACCTTACTCCGATGTCTAACGACAATGTCGGCTTGTCTAGTGC TGGCC GTGT GGCTTAAAGGGCAGGGAAGGAGCAGGTGGTTGACCGCCCACCACCCAAGAAGAG TAAAAATATGGAGTACTATGT AGGGT GCGTATCAGAGAGTATGCTCGAAAGAAGCAGGAATGAAAGCAGTGTGCTCAGGGGAGAGCAAGATGAGATAAAAGAATTGCTGCAACTTGTAGAAGAGGATGGTGTGGCTCAAGGATCTGAGTTGTATTTCATAGCTACTGACCTATTTAGGTCAGCTGCACGATGGGCAGCTTTTAGGTGTATTTACCCTGCAGAGAATCGTAAAGCATGGCTCCGATGGACTTGGGACAATGCTAGGAAAAAGTGATACCAGTCCATGCTTAGTTGTCGCACACGGTGTTTGATTGTATATACCCATCGCCAACACGACGTGGCATTATGTAATCGGTTGTTTGACCTTGGCATACTCTTATGTTATGCA                                     ]
[+] EMBL CF308751             [                                     CCCTATCGCGCCCTCTCTTCCATCGCCACGGCCCACACTCTGCCGAGCGCGTCTCGATCCCCTCCGCCTTCTCTCCCGTCCTCCTCCTGCCGAGCCACGCCGTGCCTTCCCGATCTCCTCCACGTTCTCTCCCATCCTCATCCCTCCGAGCCGTGCCGTGCCTTCCGGTCGCGCCCGACGCCACCCCTTCCCATCCCCTTCCTTTTTTCCTCTCACCACTCCCGATATGATCGATTAAATCCAATAGGATGTGAAGTTCATCTTGATTCAGCTGTGGGGGTTGAGGGGAGGGGAAGCTCGACAGTCGGCTGGAGTTAACCTCATTAGGGTGGTGGTTGTTGAGAGGATAGAGTGCAGCCAAGGGAAACATCCCGTCGGGCAAGACCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAGTTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCACNC ACGGAGCGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAATCCTCAATC TGAACAAACGA TTTCCCTCCGCCGGTCGACATCGTCAT GATCTCCACCTGAAGCCGCATGATAC AATCTGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF280311             [                                                                                         CTCGATCCCCTCCGCCTTCTCTCCCGTCCTCCTCCTGCCGAGCCACGCCGTGCCTTCCCGATCTCCTCCACGTTCTCTCCCATCCTCATCCCTCCGAGCCGTGCCGTGCCTTCCGGTCGCGCCCGACGCCACCCCTTCCCATCCCCTTCCTTTTTTCCTCTCACCACTCCCGATATGATCGATTAAATCCAATAGGATGTGAAGTTCATCTTGATTCAGCTGTGGGGGTTGAGGGGAGGGGAAGCTCGACAGTCGGCTGGAGTTAACCTCATTAGGGTGGTGGTTGTTGAGGGGATAGAGTGCAGCCAAGGGAAACATCCCGTCGGGCAAGACCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAGTTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCAC CNACGGAGCGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAATCCTCAATC TGAACAAACGA TTTCCCTCCGCCGGTCGACATCGTCAT GGTCTCCACCTGAAGCCGCATGATAC AATCTGCGTAC AACTCCTGCACGGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C71705               [                                                                                                                                                                                                                                                                     ATATGATCGATTAANTCCAATAGGATGTGAAGTTCATCTTGATTCANCTGTGGGGGTTGAGGGGAGGGGAAGCTCGACAGTCGGCTGGAGTTAACCTCATTAGGGT GTGGTTNTTGAGGGGATAGAGTGCAGCCAAGGGAAACATCCCGTCGGGCAAGACCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAGTTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCAC C ACGGAGCGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTNGGAATCCTCAATCTTGAACAAACGATTTTCCTTCCGCCGGTCGACATCGTAATGGGTCTCCACCTGAAGCCGAATGATACAAATTTGNGTACAAATTCCTGCACGGgaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU225169             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gccgctTTTATATCGCAATTTCAGAGAACAATCAGGCAAGAACTATGACAGTAAACAGCTTCAAAACAAATTTAGCACCTTTAAGAGACAATACAAGCTATGGAAGAGCCTAAAGAATAAGAGCGGAGGTGGGTGAGACGAACAATTCTAGCACCATAAGGTGCGATGATGATTGGTGGGAAGACCGTATTAGAGGAGAATAGGGATGCCAGACAGTTCCGTGGAAAGCCGCTTGAACATGAGGATGAGCTGACTACTCATTTAGGTTGCATGGACACCGAAGAAGGTACAATGTTGTGCGTAGGTGGTATTGGCAAGAGAACACCAAGCAGTGGAAGCGATGACAACCTTACTCCGATGTCAAACGACAATGTCGGCTTGTCTAGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CF308752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGGATGAGCTGACTACTCATTTTGGTTGCATGGACACCGAAGAAGGTACAATGTTGTGCGTAGGTGGTATTGGCAAGAGAACACCAAGCAGTGGAAGCGATGACAACCTTACTCCGATGTCTAACGACAATGTCGGCTTGTCTAGTGC TGGCC GTGT GGCTTAAAGGGCAGGGAAGGAGCAGGTGGTTGACCGCCCACCACCCAAGAAGAG TAAAAATATGGAGTACTATGT AGGGT GCGTATCAGAGAGTATGCTCGAAAGAAGCAGGAATGAAAGCAGTGTGCTCAGGGGAGAGCAAGATGAGATAAAAGAATTGCTGCAACTTGTAGAAGAGGATGGTGTGGCTCAAGGATCTGAGTTGTATTTCATAGCTACTGACCTATTTAGGTCAGCTGCACGATGGGCAGCTTTTAGGTGTATTTACCCTGCAGAGAATCGTAAAGCATGGCTCCGATGGACTTGGGACAATGCTAGGAAAAAGTGATACCAGTCCATGCTTAGTTGTCGCACACGGTGTTTGATTGTATATACCCATCGCCAACACGACGTGGCATTATGTAATCGGTTGTTTGACCTTGGCATACTCTTATGCTATGCATTATGACCTTATTTGCTTTGCTACTTTATCAAAAAAA]
[+] EMBL AU093746             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTCTAGTGCTTGGCCAGTGTAGGCTTAAAGGGCAGGGAAGGAGCAGGTGGTTGACCGCCCACCACCCAAGAAGAGTTAAAAATATGGAGTACTATGTAAGGGTNGCGTATCAGAGAGTATGCTCGAAAGAAGCAGGAATGAAAGCAGTGTGCTCAGGGGAGAGCAAGATGAGATAAAAGAATTGCTGCAACTTGTAGAAGAGGATGGTGTGGCTCAAGGATCTGAGTTGTATTTCATAGCTACTGACCTATTTAGGTCAGCTGCACGATGGGCAGCTTTTAGGTGTATTTACCCTGCAGAGAATCGTAAAGCATGGCTCCGATGGACTTGGGACAATGCTAGGAAAAAGTGATACCAGTCCATGCTTAGTTGTCGCACACGGTGTTTGATTGTATATACCCATCGCCAACACGACGTGGCATTATGTAATCGGTTGTTTGACCTTGGCAaaaa                                                  ]
[-] EMBL CF280120             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAAAAATATGGAGTACTATGT AGGGT GCGTATCAGAGAGTATGCTCGAAAGAAGCAGGAATGAAAGCAGTGTGCTCAGGGGAGAGCAAGATGAGATAAAAGAATTGCTGCAACTTGTAGAAGAGGATGGTGTGGCTCAAGGATCTGAGTTGTATTTCATAGCTACTGACCTATTTAGGTCAGCTGCACGATGGGCAGCTTTTAGGTGTATTTACCAAACAAAGAATCGTAAAGCATGGCTAAAATGGACTTGGGACAATGAAAAAAAAAAGTGATACCAGTCCATGCTTAGTTGTCGCACACGGTGTTTGATTGTATATACCCATCGCCAACACGACGTGGCATTATGTAATCGGTTGTTTGGCCTTGGCATACTCTTATGTTATGCATTATGACCTTATTTGCTTTGCTACTTTATCAAAAta ]
[-] EMBL CF280312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ATGT AGGGT GCGTATCAGAGAGTATGCTCGAAAGAAGCAGGAATGAAAGCAGTGTGCTCAGGGGAGAGCAAGATGAGATAAAAGAATTGCTGCAACTTGTAGAAGAGGATGGTGTGGCTCAAGGATCTGAGTTGTATTTCATAGCTACTGACCTATTTAGGTCAGCTGCACGATGGGCAGCTTTTAGGTGTATTTA CCAAAAAATAATCGTAAAGCATGGCTCCGAAGAACTTGGGACAATGCTAGAAAAAAGTGATACCAGTCCATGCTTAGTTGTCGCACACGGTGTTTGATTGTATATACCCATCGCCAACACGACGTGGCATTATGTAATCGGTTGTTTGGCCTTGGCATACTCTTATGTTATGCATTATGACGTTATATGTTTTGCTACTTTATCAAAAAA ]


>consensus_12679#0 TCCCATCTCCCAGTCCTATCGCGTAGCCCACACTCCACCCTATCGCGCCTTCTCTTCCAT CGCCACGGCCCACACTCTGCCGAGCGCGTCTCGATCCCCTCCGCCTTCTCTCCCGTCCTC CTCCTGCCGAGCCACGCCGTGCCTTCCCGATCTCCTCCACGTTCTCTCCCATCCTCATCC CTCCGAGCCGTGCCGTGCCTTCCGGTCGCGCCCGACGCCACCCCTTCCCATCCCCTTCCT TTTTTCCTCTCACCACTCCCGATATGATCGATTAAATCCAATAGGATGTGAAGTTCATCT TGATTCAGCTGTGGGGGTTGAGGGGAGGGGAAGCTCGACAGTCGGCTGGAGTTAACCTCA TTAGGGTGTGGTTGTTGAGGGGATAGAGTGCAGCCAAGGGAAACATCCCGTCGGGCAAGA CCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAGTTAGG AGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCACCACGGAGCGGTT GGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAATCCTCAATCTGAACAAACGAT TTCCCTCCGCCGGTCGACATCGTCATGGTCTCCACCTGAAGCCGCATGATACAATCTGCG TACAACTCCTGCACGGCAGAACTAACTCAAGATGGCTGGTGGTCGCACCTATTGGGACAA AGCCCTCACAAAGATATTCCTCGACTTATGCATTGCTGAGAAGACAAAGCGCAATCACAA CAAGAAGGGTCGTACCAACATAGGTTGGCAGAATTTATATCGCAATTTCAGAGAACAATC AGGCAAGAACTATGACAGTAAACAGCTTCAAAACAAATTTAGCACCTTTAAGAGACAATA CAAGCTATGGAAGAGCCTAAAGAATAAGAGCGGAGGTGGGTGGGACAACAATTCTAGCAC CATAAGGTGCGATGATGATTGGTGGGAAGACCGTATTGAGGAGAATAGGGATGCCAGACA GTTCCGTGGAAAGCCGCTTGAACATGAGGATGAGCTGACTACTCATTTTGGTTGCATGGA CACCGAAGAAGGTACAATGTTGTGCGTAGGTGGTATTGGCAAGAGAACACCAAGCAGTGG AAGCGATGACAACCTTACTCCGATGTCTAACGACAATGTCGGCTTGTCTAGTGCTGGCCG TGTGGCTTAAAGGGCAGGGAAGGAGCAGGTGGTTGACCGCCCACCACCCAAGAAGAGTAA AAATATGGAGTACTATGTAGGGTGCGTATCAGAGAGTATGCTCGAAAGAAGCAGGAATGA AAGCAGTGTGCTCAGGGGAGAGCAAGATGAGATAAAAGAATTGCTGCAACTTGTAGAAGA GGATGGTGTGGCTCAAGGATCTGAGTTGTATTTCATAGCTACTGACCTATTTAGGTCAGC TGCACGATGGGCAGCTTTTAGGTGTATTTACCCTGCAGAGAATCGTAAAGCATGGCTCCG ATGGACTTGGGACAATGCTAGGAAAAAGTGATACCAGTCCATGCTTAGTTGTCGCACACG GTGTTTGATTGTATATACCCATCGCCAACACGACGTGGCATTATGTAATCGGTTGTTTGA CCTTGGCATACTCTTATGTTATGCATTATGACCTTATTTGCTTTGCTACTTTATCAAAAA AA



consensusID : consensus_12679#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 625
fasta sequence
                              [CGAATTCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAGAGCGCGTCTCGATCCCCTCCGCCTTCTCTCCCGTCCTCCTCCTGCCGAGCCACGCCGTGCCTTCCCGATCTCCTCCACGTTCTCTCCCATCCTCATCCCTCCGAGCCGTGCCGTGCCTTCCGGTCGCGCCCGACGCCACCCCTTCCCATCCCCTTCCTTTTTTCCTCTCACCACTCCCGATATGATCGATTAAATCCAATAGGATGTGAAGTTCATCTTGATTCAGCTGTGGGGGTTGAGGGGAGGGGGAAGCTCGACAGTCGGCTGGAGTTAACCTCATTAGGGTGTTGGTTGTTGAGGGGATAGAGTGCAGCCAAGGGAAACATCCCGTCGGGCAAGACCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAGTTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCACCACGGAGCGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAATCCTCAATCTGAACAAACGATTTCCCTCCG--CCGGTCGACATCGTCATGGTCTCCACCTGAAGCCGCATGATACAATCTGCGTACAA]

[+] EMBL CF280119             [CGAATTCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAGAGCGCGTCTCGATCCCCTCCGCCTTCTCTCCCGTCCTCCTCCTGCCGAGCCACGCCGTGCCTTCCCGATCTCCTCCACGTTCTCTCCCATCCTCATCCCTCCGAGCCGTGCCGTGCCTTCCGGTCGCGCCCGACGCCACCCCTTCCCATCCCCTTCCTTTTTTCCTCTCACCACTCCCGATATGATCGATTAAATCCAATAGGATGTGAAGTTCATCTTGATTCAGCTGTGGGGGTTGAGGGGAGGGGGAAGCTCGACAGTCGGCTGGAGTTAACCTCATTAGGGTGTTGGTTGTTGAGGGGATAGAGTGCAGCCAAGGGAAACATCCCGTCGGGCAAGACCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAGTTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCACCACGGAGCGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAATCCTCAATCTGAACAAACGATTTCCCTCCG  CCGGTCGACATCGTCATGGTCTCCACCTGAAGCCGCATGATACAATCTGCGTACAA]
[+] EMBL CF323253             [                                                                                                                                                                                                                                                                                                                                                                                                                ACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAGTTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCACCACGGAGCGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAATCCTCAATCTGAACAAACGATTTCCCTCCGCACCGGTCGACATCGTC                                         ]


>consensus_12679#1 CGAATTCCCTTGGACCTGACTGGACTGAAGGAGTAGAAAGAGCGCGTCTCGATCCCCTCC GCCTTCTCTCCCGTCCTCCTCCTGCCGAGCCACGCCGTGCCTTCCCGATCTCCTCCACGT TCTCTCCCATCCTCATCCCTCCGAGCCGTGCCGTGCCTTCCGGTCGCGCCCGACGCCACC CCTTCCCATCCCCTTCCTTTTTTCCTCTCACCACTCCCGATATGATCGATTAAATCCAAT AGGATGTGAAGTTCATCTTGATTCAGCTGTGGGGGTTGAGGGGAGGGGGAAGCTCGACAG TCGGCTGGAGTTAACCTCATTAGGGTGTTGGTTGTTGAGGGGATAGAGTGCAGCCAAGGG AAACATCCCGTCGGGCAAGACCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCC GTCCAGGTCCGGCAGTTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGA TATGGCACCACGGAGCGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAAT CCTCAATCTGAACAAACGATTTCCCTCCGCCGGTCGACATCGTCATGGTCTCCACCTGAA GCCGCATGATACAATCTGCGTACAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12679#0      TCCCATCTCCCAGTCCTATCGCGTAGCCCACACTCCACCCTATCGCGCCTTCTCTTCCAT 60
consensus_12679#1      ---------------------------------------------CGAATTCCCTTGGAC 15
                                                                    **  *** ***  * 

consensus_12679#0      CGCCACGGCCCACAC---TCTGCCGAGCGCGTCTCGATCCCCTCCGCCTTCTCTCCCGTC 117
consensus_12679#1      CTGACTGGACTGAAGGAGTAGAAAGAGCGCGTCTCGATCCCCTCCGCCTTCTCTCCCGTC 75
                       *     ** *   *    *     ************************************

consensus_12679#0      CTCCTCCTGCCGAGCCACGCCGTGCCTTCCCGATCTCCTCCACGTTCTCTCCCATCCTCA 177
consensus_12679#1      CTCCTCCTGCCGAGCCACGCCGTGCCTTCCCGATCTCCTCCACGTTCTCTCCCATCCTCA 135
                       ************************************************************

consensus_12679#0      TCCCTCCGAGCCGTGCCGTGCCTTCCGGTCGCGCCCGACGCCACCCCTTCCCATCCCCTT 237
consensus_12679#1      TCCCTCCGAGCCGTGCCGTGCCTTCCGGTCGCGCCCGACGCCACCCCTTCCCATCCCCTT 195
                       ************************************************************

consensus_12679#0      CCTTTTTTCCTCTCACCACTCCCGATATGATCGATTAAATCCAATAGGATGTGAAGTTCA 297
consensus_12679#1      CCTTTTTTCCTCTCACCACTCCCGATATGATCGATTAAATCCAATAGGATGTGAAGTTCA 255
                       ************************************************************

consensus_12679#0      TCTTGATTCAGCTGTGGGGGTTGAGGGGAGGGG-AAGCTCGACAGTCGGCTGGAGTTAAC 356
consensus_12679#1      TCTTGATTCAGCTGTGGGGGTTGAGGGGAGGGGGAAGCTCGACAGTCGGCTGGAGTTAAC 315
                       ********************************* **************************

consensus_12679#0      CTCATTAGGGTGT-GGTTGTTGAGGGGATAGAGTGCAGCCAAGGGAAACATCCCGTCGGG 415
consensus_12679#1      CTCATTAGGGTGTTGGTTGTTGAGGGGATAGAGTGCAGCCAAGGGAAACATCCCGTCGGG 375
                       ************* **********************************************

consensus_12679#0      CAAGACCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAG 475
consensus_12679#1      CAAGACCCACGCTGTGTCGCTGGCGACGTCTTCTCCCCCAGATCCGTCCAGGTCCGGCAG 435
                       ************************************************************

consensus_12679#0      TTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCACCACGGAG 535
consensus_12679#1      TTAGGAGGACCGCAACCAGAAGCGCTGGCACATAACCTGAGACGATATGGCACCACGGAG 495
                       ************************************************************

consensus_12679#0      CGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAATCCTCAATCTGAACAA 595
consensus_12679#1      CGGTTGGCACTTGTAAGGTCACAAGAGCGACTTGTACGTAGGAATCCTCAATCTGAACAA 555
                       ************************************************************

consensus_12679#0      ACGATTTCCCTCCGCCGGTCGACATCGTCATGGTCTCCACCTGAAGCCGCATGATACAAT 655
consensus_12679#1      ACGATTTCCCTCCGCCGGTCGACATCGTCATGGTCTCCACCTGAAGCCGCATGATACAAT 615
                       ************************************************************

consensus_12679#0      CTGCGTACAACTCCTGCACGGCAGAACTAACTCAAGATGGCTGGTGGTCGCACCTATTGG 715
consensus_12679#1      CTGCGTACAA-------------------------------------------------- 625
                       **********                                                  

consensus_12679#0      GACAAAGCCCTCACAAAGATATTCCTCGACTTATGCATTGCTGAGAAGACAAAGCGCAAT 775
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      CACAACAAGAAGGGTCGTACCAACATAGGTTGGCAGAATTTATATCGCAATTTCAGAGAA 835
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      CAATCAGGCAAGAACTATGACAGTAAACAGCTTCAAAACAAATTTAGCACCTTTAAGAGA 895
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      CAATACAAGCTATGGAAGAGCCTAAAGAATAAGAGCGGAGGTGGGTGGGACAACAATTCT 955
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      AGCACCATAAGGTGCGATGATGATTGGTGGGAAGACCGTATTGAGGAGAATAGGGATGCC 1015
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      AGACAGTTCCGTGGAAAGCCGCTTGAACATGAGGATGAGCTGACTACTCATTTTGGTTGC 1075
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      ATGGACACCGAAGAAGGTACAATGTTGTGCGTAGGTGGTATTGGCAAGAGAACACCAAGC 1135
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      AGTGGAAGCGATGACAACCTTACTCCGATGTCTAACGACAATGTCGGCTTGTCTAGTGCT 1195
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      GGCCGTGTGGCTTAAAGGGCAGGGAAGGAGCAGGTGGTTGACCGCCCACCACCCAAGAAG 1255
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      AGTAAAAATATGGAGTACTATGTAGGGTGCGTATCAGAGAGTATGCTCGAAAGAAGCAGG 1315
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      AATGAAAGCAGTGTGCTCAGGGGAGAGCAAGATGAGATAAAAGAATTGCTGCAACTTGTA 1375
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      GAAGAGGATGGTGTGGCTCAAGGATCTGAGTTGTATTTCATAGCTACTGACCTATTTAGG 1435
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      TCAGCTGCACGATGGGCAGCTTTTAGGTGTATTTACCCTGCAGAGAATCGTAAAGCATGG 1495
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      CTCCGATGGACTTGGGACAATGCTAGGAAAAAGTGATACCAGTCCATGCTTAGTTGTCGC 1555
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      ACACGGTGTTTGATTGTATATACCCATCGCCAACACGACGTGGCATTATGTAATCGGTTG 1615
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      TTTGACCTTGGCATACTCTTATGTTATGCATTATGACCTTATTTGCTTTGCTACTTTATC 1675
consensus_12679#1      ------------------------------------------------------------
                                                                                   

consensus_12679#0      AAAAAAA 1682
consensus_12679#1      -------
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)