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Oryza sativa
cluster # 12714 cluster # 12714       Sequences # 11       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12714#0 length = 2055 sequences # 5  
consensus_12714#1 length = 1867 sequences # 4  
consensus_12714#2 length = 688 sequences # 1  
consensus_12714#3 length = 573 sequences # 1  

consensusID : consensus_12714#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2055
fasta sequence
                              [TTAGTTGGCATGAACAGCTAATTTTGTAACATCTGGAATGACTCCCACTCATTTTTGTGTCAAGCCCACGTCATAATTACTCCAAGCACTCCAAATGATGGCTTCCATAAATACCATGGAAAGCTCCAAACCTTACAAAATGTCATTTGCTTTCCACGACAATCAGATTTACCATTTAAGGGCGATACCTTTATGTAGAAAAAATTTCCGTTCTGTTGAAGTTGACATGGCTGTACCAGTTGAAGGTGCATGTGAAAGTCAGCTGTATCGGTTGCAGAGAATAATCGCTACTCGGTTGTCTCCATCAAGTTGAGCATGCAAGGTCTGGATCCCACATGCAATCTTAGTGCTAGTCAAAATTCACACTTTCTACATAGAATTGTGGAATAAGATAATAACCAAATTGTGTCGATGGATATTCCAGTTCCAATAAATTAGGCTACAAACTACCTGTACCTGGTTATACATTTTTTGTGTTGCATACTGTTACATATTAAGAATATGCAGTCCGGGTTTATCACTGGACTAACTTTGGTCAAGGAGCATCAAGGTGTGATGCATCACCCAGTTGCTCACTCAACAACTGTCTCAAGTCCCACTGTCCCTTTGAAACTCTTGTTTCCGACCATGCAATTAGATGCCTTGGCCCATTGCTTCTCAAGGCCTCAACCACATACTAAGTGCTATACAACTTGGTCCCTACCATGTTAACCCAGCCAGGACGTCTGAAATAATTGTCCTAACTGGCGCGGGGAAAACCTCACCTATATCAGGCACATGTATGTCCCACTTTCCCATGCCTATTTACCAGCGGGTGCACAAATACAATGTAGATTGATGAGGTACCTATGATGTGTATGATTAAAATCATGTGTATGTGTGAAGTGTAGAACTGTAAATTAGGCAACTAATTTCCACAGCCAGTTCACGTGTCCATGACACTCCATCTGTCTTGTTCCCTGTCTTCAATGAACAAACTGCTTATTGTGGTCCTCCTTGCTGTAGTACCTTCCATCACCTCACTTGTGTGCCTGAAGGGTGAGTTTCTGGCGCAGGAGGCCAAGCATTCTGCCAGACGCCCGAGGAGCCATTCCATCTACTTCACTCTGATTTTGTCTAAACTTTTTTATTGTGCTGTAAATTAATTACTATCGCTTGCTACCGTAAGTGAAAAAAAATTCTGGTTATGATCTTTTGAGCGTCTAACTCATATATATGTTCTGATTATTTACTGACAATGAATTCGCAGATAGAGAGACTTGCCAGAACTGATTCTGACTTTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATGGATTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCT-GATGAGGCGGCGATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGGTGCGGAAAATCTCTAGGGCAATCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTTTATACTCTAGCCTTTCTGTGGCTCCATAAAAACTGTGTATAAATAAAATCGATTGGGG-TTGAGAAATGAAATCTTGTTCCTGCGCGAAAAAAGAAAAAGG]

[+] EMBL AK106495             [TTAGTTGGCATGAACAGCTAATTTTGTAACATCTGGAATGACTCCCACTCATTTTTGTGTCAAGCCCACGTCATAATTACTCCAAGCACTCCAAATGATGGCTTCCATAAATACCATGGAAAGCTCCAAACCTTACAAAATGTCATTTGCTTTCCACGACAATCAGATTTACCATTTAAGGGCGATACCTTTATGTAGAAAAAATTTCCGTTCTGTTGAAGTTGACATGGCTGTACCAGTTGAAGGTGCATGTGAAAGTCAGCTGTATCGGTTGCAGAGAATAATCGCTACTCGGTTGTCTCCATCAAGTTGAGCATGCAAGGTCTGGATCCCACATGCAATCTTAGTGCTAGTCAAAATTCACACTTTCTACATAGAATTGTGGAATAAGATAATAACCAAATTGTGTCGATGGATATTCCAGTTCCAATAAATTAGGCTACAAACTACCTGTACCTGGTTATACATTTTTTGTGTTGCATACTGTTACATATTAAGAATATGCAGTCCGGGTTTATCACTGGACTAACTTTGGTCAAGGAGCATCAAGGTGTGATGCATCACCCAGTTGCTCACTCAACAACTGTCTCAAGTCCCACTGTCCCTTTGAAACTCTTGTTTCCGACCATGCAATTAGATGCCTTGGCCCATTGCTTCTCAAGGCCTCAACCACATACTAAGTGCTATACAACTTGGTCCCTACCATGTTAACCCAGCCAGGACGTCTGAAATAATTGTCCTAACTGGCGCGGGGAAAACCTCACCTATATCAGGCACATGTATGTCCCACTTTCCCATGCCTATTTACCAGCGGGTGCACAAATACAATGTAGATTGATGAGGTACCTATGATGTGTATGATTAAAATCATGTGTATGTGTGAAGTGTAGAACTGTAAATTAGGCAACTAATTTCCACAGCCAGTTCACGTGTCCATGACACTCCATCTGTCTTGTTCCCTGTCTTCAATGAACAAACTGCTTATTGTGGTCCTCCTTGCTGTAGTACCTTCCATCACCTCACTTGTGTGCCTGAAGGGTGAGTTTCTGGCGCAGGAGGCCAAGCATTCTGCCAGACGCCCGAGGAGCCATTCCATCTACTTCACTCTGATTTTGTCTAAACTTTTTTATTGTGCTGTAAATTAATTACTATCGCTTGCTACCGTAAGTGAAAAAAAATTCTGGTTATGATCTTTTGAGCGTCTAACTCATATATATGTTCTGATTATTTACTGACAATGAATTCGCAGATAGAGAGACTTGCCAGAACTGATTCTGACTTTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATGGATTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCT GATGAGGCGGCGATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGGTGCGGAAAATCTCTAGGGCAATCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTTTATACTCTAGCCTTTCTGTGGCTCCATAAAAACTGTGTATAAATAAAATCGATTGGGG T                                         ]
[+] EMBL CB642563             [       GCATGACCAGCTAATTTTGTAACATCTGGAATGACTCCCACTCATTTTTGTGTCAAGCCCACGTCATAATTACTCCAAGCACTCCAAATGATGGCTTCCATAAATACCATGGAAAGCTCCAAACCTTACAAAATGTCATTTGCTTTCCACGACAATCAGATTTACCATTTAAGGGCGATACCTTTATGTAGAAAAAATTTCCGTTCTGTTGAAGTTGACATGGCTGTACCAGTTGAAGGTGCATGTGAAAGTCAGCTGTATCGGTTGCAGAGAATAATCGCTACTCGGTTGTCTCCATCAAGTTGAGCATGCAAGGTCTGGATCCCACATGCAATCTTATTGCTAGTCAAAATTCACACTTTCTACATAGAATTGTGGAATAAGATAATAACCAAATTGTGTCGATGGATATTCCAGTTCCAATAAATTAGGCTACAAACTACCTGTACCTGGTTATACATTTTTTGTGTTGCATACTGTTACATATTAAGAATATGCAGTCCGGGTTTATCACTGGACTAACTTTGGTCAAGGAGCATCAAGGTGTGATGCATCACCCAGTTGCTCACTCAACAACTGTCTCAAGTCCCACTGTCCCTTTGAAACTCTTGTTTCCGACCATGCAATTAGATGCCTTGGCCCATTGCTTCTCAAGGCCTCAACCACATACTAAGTGCTATACAACTTGGTCCCTACCATGTTAACCCAGCCAGGACGTCTGAAATAATTGTCCTAACTGGCGCGGGGAAAACCTCACCTATATCAGGCACATGTATGTCCCACTTTCCCATGCCTATTTACCAGCGGGTGCACAAATACAATGTAGATTGATGAGGTACCTATGATGTGTATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB642564             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GACTTGCCAGAACTGATTCTGACTTTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATGGATTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCT GATGAGGCGGCGATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGGTGCGGAAAATCTCTAGGGCAATCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTTTATACTCTAGCCTTTCTGTGGCTCCATAAAAACTGTGTATAAATAAAATCGATGGGGGTTTGAGAAATGAAATCTTGTTCCTGCGCGAAAAAAGA      ]
[+] EMBL OSC03492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACTTGCCAGAACTGATTCTGACTTTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATGGATTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCTGGATGAGGCGGCGA                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB682305             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCATTTCTACATCATGCTGGGATCCCCTGTATGGATTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCT GATGAGGCGGCGATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGGTGCGGAAAATCTCTAGGGCAATCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTTTATACTCTAGCCTTTCTGTGGCTCCATAAAAACTGTGTATAAATAAAATCGATTGGGG GGGAGAAATGAAATCTTGTTCCTGTGCAAAAACAAAAAAAGG]


>consensus_12714#0 TTAGTTGGCATGAACAGCTAATTTTGTAACATCTGGAATGACTCCCACTCATTTTTGTGT CAAGCCCACGTCATAATTACTCCAAGCACTCCAAATGATGGCTTCCATAAATACCATGGA AAGCTCCAAACCTTACAAAATGTCATTTGCTTTCCACGACAATCAGATTTACCATTTAAG GGCGATACCTTTATGTAGAAAAAATTTCCGTTCTGTTGAAGTTGACATGGCTGTACCAGT TGAAGGTGCATGTGAAAGTCAGCTGTATCGGTTGCAGAGAATAATCGCTACTCGGTTGTC TCCATCAAGTTGAGCATGCAAGGTCTGGATCCCACATGCAATCTTAGTGCTAGTCAAAAT TCACACTTTCTACATAGAATTGTGGAATAAGATAATAACCAAATTGTGTCGATGGATATT CCAGTTCCAATAAATTAGGCTACAAACTACCTGTACCTGGTTATACATTTTTTGTGTTGC ATACTGTTACATATTAAGAATATGCAGTCCGGGTTTATCACTGGACTAACTTTGGTCAAG GAGCATCAAGGTGTGATGCATCACCCAGTTGCTCACTCAACAACTGTCTCAAGTCCCACT GTCCCTTTGAAACTCTTGTTTCCGACCATGCAATTAGATGCCTTGGCCCATTGCTTCTCA AGGCCTCAACCACATACTAAGTGCTATACAACTTGGTCCCTACCATGTTAACCCAGCCAG GACGTCTGAAATAATTGTCCTAACTGGCGCGGGGAAAACCTCACCTATATCAGGCACATG TATGTCCCACTTTCCCATGCCTATTTACCAGCGGGTGCACAAATACAATGTAGATTGATG AGGTACCTATGATGTGTATGATTAAAATCATGTGTATGTGTGAAGTGTAGAACTGTAAAT TAGGCAACTAATTTCCACAGCCAGTTCACGTGTCCATGACACTCCATCTGTCTTGTTCCC TGTCTTCAATGAACAAACTGCTTATTGTGGTCCTCCTTGCTGTAGTACCTTCCATCACCT CACTTGTGTGCCTGAAGGGTGAGTTTCTGGCGCAGGAGGCCAAGCATTCTGCCAGACGCC CGAGGAGCCATTCCATCTACTTCACTCTGATTTTGTCTAAACTTTTTTATTGTGCTGTAA ATTAATTACTATCGCTTGCTACCGTAAGTGAAAAAAAATTCTGGTTATGATCTTTTGAGC GTCTAACTCATATATATGTTCTGATTATTTACTGACAATGAATTCGCAGATAGAGAGACT TGCCAGAACTGATTCTGACTTTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATGGA TTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGGAT GGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACT ACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTC CCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCA TTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGC AAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCTGATGAGGCGGCGATTGTT GAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAG AGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTT TTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCA GGCGGCGGTGCGGCATGAGGTGCGGAAAATCTCTAGGGCAATCCAAAGAGCAGCTGATGT TCTTAGAGGCGAATTCAGTAATAGGAACGAATCTTTATACTCTAGCCTTTCTGTGGCTCC ATAAAAACTGTGTATAAATAAAATCGATTGGGGTTGAGAAATGAAATCTTGTTCCTGCGC GAAAAAAGAAAAAGG



consensusID : consensus_12714#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1867
fasta sequence
                              [GGCTCCGAACCCTAACGCGGGAGTACACGCCGCTGCTCTCGTACCCGGGGCACGCCTCCCTCGCGCTGCTCCGCGCCGACCGGACCCTCCTCGCGCACCTGTCCCTCGACGAGCCGGCGGACGTCGGGCGCCGCCTCGTGCGGCCGTACCACGCGTACGCCCCGTCCGGCGGGGCCGTCGCGGAGGCGGTGTTCGTCAACCTCGGCCGCGAGGAGGACTACCTCACGCTGGAGCGGCTCGGGGTGAGCGTCCGCGGCCGCGTCGCGGTGGCGATCCGAGGAGGAGGCTACCGCGGCGGGGTGGTGCGCCGCGCCGCGGAAAGGAGCGCCGCTGCCGTTCTCATTGCCGGCCACGCGGACGGCGGGGTCGAGAGGGGCACGGTAATCCTCGGAGGCCCCGGCGACCCGCTCACCCCCGGGTGGGCCGCCACGGCCGGGGCGGAGCGCCTGGATTTCGACCACGAGGATGTTAAGCGGCGGTTTCCGGCCATCCCATCTATGCCGGTGTCGGGCAAGACGGCTTCGGCTATCATACGGACACTAGGTGGCCCGGCTTTGCCGGCGGATTGGCAGACCGGAGTTGGACTCCCGGTGGATGTCGGCGGCGTTGGACCTGGACCCACTCTGGTCAACTTCACATATCAGGAGGACAGGAAGATGGGCATGATACAGGATATTTTTGCTATTATTAAAGGGTACGAAGAACCTGATCGTTACGTTATCCTTGGTAACCACCGAGATGCATGGACCTATGGAGCAGTTGACCCTAACAGCGGGACATCTGCGCTTCTTGATATTGCTCGGCGTCTTGGAATAATGCTGCAGTCAGGCTGGACACCACGGAGGACCATCATTCTTTGTAGTTGGGATGCCGAAGAGTTTGGAATGATCGGATCAACTGAATGGGTCGAAGAGAACCTCGAAGATCTGCAATCGAAAGCTGTAGCTTACTTAAATGTTGATTGTGCGGTGCAAGGAATTGGGCTTTTTGCTGGTTCTACCCCCCAGTTGGACAACCTCTTGGTCGATGTTACAAGACAGGTAAAAGATCCAGATGTTGAAGGAAAAACAGTCCATGATACATGGAATAAAATGACCGGAGGCATCAATATAGAAAGACTTGCCAGAACTGATTCTGACTTTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATGGATTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCTTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCTGATGAGGCGGCGATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGGTGCGGAAAATCTCTAGGGCAATCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTTTATACTCTAGCCTTTCTGTGGCTCCATAAAAACTGTGTATAAATAAAATCGA]

[+] EMBL CB682304             [GGCTCCGAACCCTAACGCGGGAGTACACGCCGCTGCTCTCGTACCCGGGGCACGCCTCCCTCGCGCTGCTCCGCGCCGACCGGACCCTCCTCGCGCACCTGTCCCTCGACGAGCCGGCGGACGTCGGGCGCCGCCTCGTGCGGCCGTACCACGCGTACGCCCCGTCCGGCGGGGCCGTCGCGGAGGCGGTGTTCGTCAACCTCGGCCGCGAGGAGGACTACCTCACGCTGGAGCGGCTCGGGGTGAGCGTCCGCGGCCGCGTCGCGGTGGCGATCCGAGGAGGAGGCTACCGCGGCGGGGTGGTGCGCCGCGCCGCGGAAAGGAGCGCCGCTGCCGTTCTCATTGCCGGCCACGCGGACGGCGGGGTCGAGAGGGGCACGGTAATCCTCGGAGGCCCCGGCGACCCGCTCACCCCCGGGTGGGCCGCCACGGCCGGGGCGGAGCGCCTGGATTTCGACCACGAGGATGTTAAGCGGCGGTTTCCGGCCATCCCATCTATGCCGGTGTCGGGCAAGACGGCTTCGGCTATCATACGGACACTAGGTGGCCCGGCTTTGCCGGCGGATTGGCAGACCGGAGTTGGACTCCCGGTGGATGTCGGCGGCGTTGGACCTGGACCCACTCTGGTCAACTTCACATATCAGGAGGACAGGAAGATGGGCATGATACAGGATATTTTTGCTATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK103648             [                                                                                                                                                                                                                                               GGGGTGAGCGTCCGCGGCCGCGTCGCGGTGGCGATCCGAGGAGGAGGCTACCGCGGCGGGGTGGTGCGCCGCGCCGCGGAAAGGAGCGCCGCTGCCGTTCTCATTGCCGGCCACGCGGACGGCGGGGTCGAGAGGGGCACGGTAATCCTCGGAGGCCCCGGCGACCCGCTCACCCCCGGGTGGGCCGCCACGGCCGGGGCGGAGCGCCTGGATTTCGACCACGAGGATGTTAAGCGGCGGTTTCCGGCCATCCCATCTATGCCGGTGTCGGGCAAGACGGCTTCGGCTATCATACGGACACTAGGTGGCCCGGCTTTGCCGGCGGATTGGCAGACCGGAGTTGGACTCCCGGTGGATGTCGGCGGCGTTGGACCTGGTCCCACTCTGGTCAACTTCACATATCAGGAGGACAGGAAGATGGGCATGATACAGGATATTTTTGCTATTATTAAAGGGTACGAAGAACCTGATCGTTACGTTATCCTTGGTAACCACCGAGATGCATGGACCTATGGAGCAGTTGACCCTAACAGCGGGACATCTGCGCTTCTTGATATTGCTCGGCGTCTTGGAATAATGCTGCAGTCAGGCTGGACACCACGGAGGACCATCATTCTTTGTAGTTGGGATGCCGAAGAGTTTGGAATGATCGGATCAACTGAATGGGTCGAAGAGAACCTCGAAGATCTGCAATCGAAAGCTGTAGCTTACTTAAATGTTGATTGTGCGGTGCAAGGAATTGGGCTTTTTGCTGGTTCTACCCCCCAGTTGGACAACCTCTTGGTCGATGTTACAAGACAGGTAAAAGATCCAGATGTTGAAGGAAAAACAGTCCATGATACATGGAATAAAATGACCGGAGGCATCAATATAGAAAGACTTGCCAGAACTGATTCTGACTTTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATGGATTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCTTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCTGATGAGGCGGCGATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGGTGCGGAAAATCTCTAGGGCAATCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTTTATACTCTAGCCTTTCTGTGGCTCCATAAAAACTGTGTATAAATAAAATCGA]
[+] EMBL AU176404             [                                                                                                                                                                                                                                                                                                      GCGGGGTGGTGCGCCGCGCCGCGGAAAGGAGCGCCGCTGCCGTTCTCATTGCCGGCCACGCGGACGGCGGGGTCGAGAGGGGCACGGTAATCCTCGGAGGCCCCGGCGACCCGCTCACCCCCGGGTGGGCCGCCACGGCCGGGGCGGAGCGCCTGGATTTCGACCACGAGGATGTTAAGCGGCGGTTTCCGGCCATCCCATCTATGCCGGTGTCGGGCAAGACGGCTTCGGCTATCATACGGACACTAGGTGGCCCGGCTTTGCCGGCGGATTGGCAGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB684819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATGTTCTTTGTGCGGTGCAAGGAATTGGGCTTTTTGCTGGTTCTACCCCCCAGTTGGACAACCTCTTGGTCGATGTTACAAGACAGGTAAAAGATCCAGATGTTGAAGGAAAAACAGTCCATGATACATGGAATAAAATGACCGGAGGCATCAATATAGAAAGACTTGCCAGAACTGATTCTGACTTTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATGGATTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACC AAATATATCCGATGGGTACTCTCTGATGAGGCGGCGATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGANAGCAAGCTCTCGTTTTTCCCTGNGGTGGCGGA                                                                                                                                                                                             ]


>consensus_12714#1 GGCTCCGAACCCTAACGCGGGAGTACACGCCGCTGCTCTCGTACCCGGGGCACGCCTCCC TCGCGCTGCTCCGCGCCGACCGGACCCTCCTCGCGCACCTGTCCCTCGACGAGCCGGCGG ACGTCGGGCGCCGCCTCGTGCGGCCGTACCACGCGTACGCCCCGTCCGGCGGGGCCGTCG CGGAGGCGGTGTTCGTCAACCTCGGCCGCGAGGAGGACTACCTCACGCTGGAGCGGCTCG GGGTGAGCGTCCGCGGCCGCGTCGCGGTGGCGATCCGAGGAGGAGGCTACCGCGGCGGGG TGGTGCGCCGCGCCGCGGAAAGGAGCGCCGCTGCCGTTCTCATTGCCGGCCACGCGGACG GCGGGGTCGAGAGGGGCACGGTAATCCTCGGAGGCCCCGGCGACCCGCTCACCCCCGGGT GGGCCGCCACGGCCGGGGCGGAGCGCCTGGATTTCGACCACGAGGATGTTAAGCGGCGGT TTCCGGCCATCCCATCTATGCCGGTGTCGGGCAAGACGGCTTCGGCTATCATACGGACAC TAGGTGGCCCGGCTTTGCCGGCGGATTGGCAGACCGGAGTTGGACTCCCGGTGGATGTCG GCGGCGTTGGACCTGGACCCACTCTGGTCAACTTCACATATCAGGAGGACAGGAAGATGG GCATGATACAGGATATTTTTGCTATTATTAAAGGGTACGAAGAACCTGATCGTTACGTTA TCCTTGGTAACCACCGAGATGCATGGACCTATGGAGCAGTTGACCCTAACAGCGGGACAT CTGCGCTTCTTGATATTGCTCGGCGTCTTGGAATAATGCTGCAGTCAGGCTGGACACCAC GGAGGACCATCATTCTTTGTAGTTGGGATGCCGAAGAGTTTGGAATGATCGGATCAACTG AATGGGTCGAAGAGAACCTCGAAGATCTGCAATCGAAAGCTGTAGCTTACTTAAATGTTG ATTGTGCGGTGCAAGGAATTGGGCTTTTTGCTGGTTCTACCCCCCAGTTGGACAACCTCT TGGTCGATGTTACAAGACAGGTAAAAGATCCAGATGTTGAAGGAAAAACAGTCCATGATA CATGGAATAAAATGACCGGAGGCATCAATATAGAAAGACTTGCCAGAACTGATTCTGACT TTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATGGATTTATACTATGGAAAAGAAT TTCCTGGATATCATACGGCTCTTGACTCGTATCATTGGATGGAAAAGCATGGTGATCCAC TGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCTTTCGATTAGCAG ATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAA ATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTG AAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACCAAA ATATATCCGATGGGTACTCTCTGATGAGGCGGCGATTGTTGAACGACCGTCTTCTACTTG CTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGA TGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACG CCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGG TGCGGAAAATCTCTAGGGCAATCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTA ATAGGAACGAATCTTTATACTCTAGCCTTTCTGTGGCTCCATAAAAACTGTGTATAAATA AAATCGA



consensusID : consensus_12714#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 688
fasta sequence
                              [GGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCTGATGAGGCGGCGATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGCAACTGCCGGTGCAGGAGCGCGGGCGGGCGGCGGCGCACCGTCGACGCAGCAGGCTACGACGTCTGCCGCGTGGCAGCTGGAAGACTTCGCATCTGAATTCTCGTTTCCTTGATTGGCTTCACAACACGTCGACTGATGAGCGATGAGACAGAAATCTGTAACATCTTCATGTAATAAAACTGCA]

[+] EMBL AK063229             [GGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGACTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGGTTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAGAGGCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCTGATGAGGCGGCGATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGCAACTGCCGGTGCAGGAGCGCGGGCGGGCGGCGGCGCACCGTCGACGCAGCAGGCTACGACGTCTGCCGCGTGGCAGCTGGAAGACTTCGCATCTGAATTCTCGTTTCCTTGATTGGCTTCACAACACGTCGACTGATGAGCGATGAGACAGAAATCTGTAACATCTTCATGTAATAAAACTGCA]


>consensus_12714#2 GGATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGG GACTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACG CTTCCCAGTTGCAGGAGCATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGG TTCATTTGCTGAATAGATCCATTGAAGATCTTTCTGATGCAGGCTTAGAATTTCTGAAAG AGGCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCTGATGAGGCGGCGAT TGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGG GAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCT CGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAAC AGCAGGCGGCGGTGCGGCATGAGCAACTGCCGGTGCAGGAGCGCGGGCGGGCGGCGGCGC ACCGTCGACGCAGCAGGCTACGACGTCTGCCGCGTGGCAGCTGGAAGACTTCGCATCTGA ATTCTCGTTTCCTTGATTGGCTTCACAACACGTCGACTGATGAGCGATGAGACAGAAATC TGTAACATCTTCATGTAATAAAACTGCA



consensusID : consensus_12714#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 573
fasta sequence
                              [AACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGGTGAGCCTTAAGTGGGTCAGCCATGAACCCACTTATAGGTCAAAATAAGCAGGTCTGCGGCTTATTTTGGCCTATAAGTGGGTTTCGCGGGTTAGCCACTTACACTCTTAAGCCTCCCGCTATTCATAAGTCATAAGTCATAACCAAATTTAGAAAAAAAAAATGTTGTGCGTGACCACGCTTTTATATTTCTTGCTAGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGGTGCGGAAAATCTCTAGGGCAATCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTTTATACTCTAGCCTTTCTGTGGCTCCATAAAAACTGTGTATAAATAAAATCGATTGGGGTTTGAGAAATGAAATCTTGTTCCTGTGCGAAAAAAAAAAAAA]

[+] EMBL C97996               [AACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGGTGAGCCTTAAGTGGGTCAGCCATGAACCCACTTATAGGTCAAAATAAGCAGGTCTGCGGCTTATTTTGGCCTATAAGTGGGTTTCGCGGGTTAGCCACTTACACTCTTAAGCCTCCCGCTATTCATAAGTCATAAGTCATAACCAAATTTAGAAAAAAAAAATGTTGTGCGTGACCACGCTTTTATATTTCTTGCTAGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGGTGCGGAAAATCTCTAGGGCAATCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTTTATACTCTAGCCTTTCTGTGGCTCCATAAAAACTGTGTATAAATAAAATCGATTGGGGTTTGAGAAATGAAATCTTGTTCCTGTGCGAAAAAAAAAAAAA]


>consensus_12714#3 AACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCAGGGAAGA GGATGGTTCAAGCATCTGGTGAGCCTTAAGTGGGTCAGCCATGAACCCACTTATAGGTCA AAATAAGCAGGTCTGCGGCTTATTTTGGCCTATAAGTGGGTTTCGCGGGTTAGCCACTTA CACTCTTAAGCCTCCCGCTATTCATAAGTCATAAGTCATAACCAAATTTAGAAAAAAAAA ATGTTGTGCGTGACCACGCTTTTATATTTCTTGCTAGATGTACTCGCCTCCGGAGGACTA CGAAAGCAAGCTCTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCG AAGCGCGAAAGAACAGCAGGCGGCGGTGCGGCATGAGGTGCGGAAAATCTCTAGGGCAAT CCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTTTATACTC TAGCCTTTCTGTGGCTCCATAAAAACTGTGTATAAATAAAATCGATTGGGGTTTGAGAAA TGAAATCTTGTTCCTGTGCGAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12714#1      ------------------------------------------------------------
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      TTAGTTGGCATGAACAGCTAATTTTGTAACATCTGGAATGACTCCCACTCATTTTTGTGT 60
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      --------------------------GGCTCCGAACCCTAACGCGGGAGTACACGCCGCT 34
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      CAAGCCCACGTCATAATTACTCCAAGCACTCCAAATGATGGCTTCCATAAATACCATGGA 120
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      GCTCTCGTACCCGGGGCACGCCTCCCTCGCGCTGCTCCGCG-CCGACCGGACCCTCCTCG 93
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      AAGCTCCAAACCTTACAAAATGTCATTTGCTTTCCACGACAATCAGATTTACCATTTAAG 180
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      CGCACCTGTCCCTCGACGAGCCGGCGGACGTCGGGCGCCGCCTCGTGCGGCCGTACCACG 153
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      GGCGATACCTTTATGTAGAAAAAATTTCCGTTCTGTTGAAGTTGACATGGCTGTACCAGT 240
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      CGTACGCCCC-------GTCCGGCGGGGCCGTCGCGGAGG-----CGGTGTTCGTCAACC 201
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      TGAAGGTGCATGTGAAAGTCAGCTGTATCGGTTGCAGAGAATAATCGCTACTCGGTTGTC 300
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      TCGGCCGCGAGGAGGACTA-----CCTCACGCTGGAGCGGCTCGGGGTGAGCGTCCGCGG 256
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      TCCATCAAGTTGAGCATGCAAGGTCTGGATCCCACATGCAATCTTAGTGCTAGTCAAAAT 360
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      CCGCG-TCGCGGTGGCGATCCGAGGAGGAGGCTA----CCGCGGCGGGGTGGTGCGCCGC 311
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      TCACACTTTCTACATAGAATTGTGGAATAAGATAATAACCAAATTGTGTCGATGGATATT 420
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      GCCGCGGAAAGGAGCGCCGCTGCCG--TTCTCATTGCCGGCCACGCGGACGGCGGGGTCG 369
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      CCAGTTCCAATAAATTAGGCTACAAACTACCTGTACCTGGTTATACATTTTTTGTGTTGC 480
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      AGAGGG--GCACGGTAATCCTCGGAGGCCCCGGCGACCCGCT----CACCCCCGGGTGGG 423
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      ATACTGTTACATATTAAGAATATGCAGTCCGGGTTTATCACTGGACTAACTTTGGTCAAG 540
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      CCGCCACG-GCCGGGGCGGAGCGCCTGGATTTCGACC--ACGAGGATGTTAAGCGGCGGT 480
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      GAGCATCAAGGTGTGATGCATCACCCAGTTGCTCACTCAACAACTGTCTCAAGTCCCACT 600
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      TTCCGGCC--ATCCCATCTATGCCGGTGTCGGGCAAGACGGCTTCGGCTAT-----CATA 533
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      GTCCCTTTGAAACTCTTGTTTCCGACCATGCAATTAGATGCCTTGGCCCATTGCTTCTCA 660
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      CGGACACTAGGTGGCCCGGCTTTGCCGGCGGATTGGCAGACCGGAGTTGGACTCCCGGTG 593
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      AGGCCTCAACCACATACTAAGTGCTATACAACTTGGTCCCTACCATGTTAACCCAGCCAG 720
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      GATGTCGGCGGCGTTGGACCTGGACCCACTCTGGTCAACTTCACATATCAGGAGGACAGG 653
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      GACGTCTGAAATAATTGTCCTAACTGGCGCGGGGAAAACCTCACCTATATCAGGCACATG 780
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      AAGATGGGCATGATACAGGATATTTTTGCTATTATTAAA-GGGTACGAAGAACCTGATCG 712
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      TATGTCCCACTTTCCCATGCCTATTTACCAGCGGGTGCACAAATACAATGTAGATTGATG 840
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      TTACGTTATCCTTGGTAACCACCGAGATGCATGGACCTATGGAGCAGTTGACCCTAACAG 772
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      AGGTACCTATGATGTGTATGATTAAAAT-CATGTGTATGTGTGAAGTGTAGAACTGTAAA 899
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      CGGGACATCTGCGCTTCTTGATATTGCTCGGCGTCTTGGAATAATGCTGCAGTCAGGCTG 832
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      TTAGGCAACTA-ATTTCCACAGCCAGTTCACGTGTCCATGACACTCCATCTGTCTTGTTC 958
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      GACACCACGGAGGACCATCATTCTTTGTAGTTGGGATGCCGAAGAGTTTGGAATGATCGG 892
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      CCTGTCTTCAATGAACAAACTGCTTATTGTGGTCCTCCTTGCTGTAGTACCTTCCATCAC 1018
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      ATCAACTGAATGGGTCGAAGAGAACCTCGAAGATCTGCAATCGAAAGCTGTAGCTTACTT 952
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      CTCACTTGTGTGCCTGAAGGGTGAGTTTCTGGCGCAGGAGGCCAAGCATTCTGCCAGACG 1078
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      AAATGTTGATTGTGCGGTGCAAGGAATTGGGCTTTTTGCTGG----TTCTACCCCCCAGT 1008
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      CCCGAGGAGCCATTCCATCTACTTCACTCTGATTTTGTCTAAACTTTTTTATTGTGCTGT 1138
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      TGGACAACCTCTTGGTCGATGTTACAAGACAGGTAAAAGATCCAGATGTTGAAGGAAAAA 1068
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      AAATTAATTACTATCGCTTGCTACCGTAAGTGAAAAAAAATTCTGGTTATGATCTTTTGA 1198
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      CAGTCCATGATACATGGA----------ATAAAATGACCGGAGGCATCAATATAGAAAGA 1118
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      GCGTCTAACTCATATATATGTTCTGATTATTTACTGACAATGAATTCGCAGATAGAGAGA 1258
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      CTTGCCAGAACTGATTCTGACTTTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATG 1178
consensus_12714#2      ------------------------------------------------------------
consensus_12714#0      CTTGCCAGAACTGATTCTGACTTTGCTCCATTTCTACATCATGCTGGGATCCCCTGTATG 1318
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      GATTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGG 1238
consensus_12714#2      ----------------------------------------------------------GG 2
consensus_12714#0      GATTTATACTATGGAAAAGAATTTCCTGGATATCATACGGCTCTTGACTCGTATCATTGG 1378
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      ATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGA 1298
consensus_12714#2      ATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGA 62
consensus_12714#0      ATGGAAAAGCATGGTGATCCACTGTTTCTTCGTCACGTGGCTATTGTGGAGATTTGGGGA 1438
consensus_12714#3      ------------------------------------------------------------
                                                                                   

consensus_12714#1      CTACTGGCCTTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCT 1358
consensus_12714#2      CTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCT 122
consensus_12714#0      CTACTGGCCCTTCGATTAGCAGATGACCCTGTGCTGCCTTTTGATTATCAAACATACGCT 1498
consensus_12714#3      ---------------------AACGACCGTCTTCTACTTGCTGA-----AAGAAGCTTTC 34
                                             * **** * * ** * *  ***     **  *      

consensus_12714#1      TCCCAGTTGCAGGAG--CATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGG 1416
consensus_12714#2      TCCCAGTTGCAGGAG--CATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGG 180
consensus_12714#0      TCCCAGTTGCAGGAG--CATGCAAATGCATTCTCTAGTATGATGGAAAATAGCAAATGGG 1556
consensus_12714#3      TGCAAGCTGATGGACTTCAGGGAAGAGGATGGTTCAAGCATCTGGTGAGCCTTAAGTGGG 94
                       * * ** **  ***   ** * **  * **  *  *      ***  *     ** ****

consensus_12714#1      TTCATTTGCTGAATAGATCCATTGA-AGATCTTTCTGATGCAGGCTTAGAATTTCTGAAA 1475
consensus_12714#2      TTCATTTGCTGAATAGATCCATTGA-AGATCTTTCTGATGCAGGCTTAGAATTTCTGAAA 239
consensus_12714#0      TTCATTTGCTGAATAGATCCATTGA-AGATCTTTCTGATGCAGGCTTAGAATTTCTGAAA 1615
consensus_12714#3      TCAGCC------ATGAACCCACTTATAGGTCAAAATAA-GCAGGTCTGCGGCTTATTTTG 147
                       *           **  * *** * * ** **    * * *****  *     ** *    

consensus_12714#1      GAG-GCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCTGATGAGGCGGCG 1534
consensus_12714#2      GAG-GCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCTGATGAGGCGGCG 298
consensus_12714#0      GAG-GCAAAGAAATTACAGGACCAAAATATATCCGATGGGTACTCTCTGATGAGGCGGCG 1674
consensus_12714#3      GCCTATAAGTGGGTTTCGCGGGTTAGCCACTTACACTCTTAAGCCTCCCGCTATTCA-TA 206
                       *     **     ** *  *    *   *  * *  *    *  ***     *  *    

consensus_12714#1      ATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCA 1594
consensus_12714#2      ATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCA 358
consensus_12714#0      ATTGTTGAACGACCGTCTTCTACTTGCTGAAAGAAGCTTTCTGCAAGCTGATGGACTTCA 1734
consensus_12714#3      AGTCATAAGTCATAACCAAAT-TTAGAAAAAAAAAATGTTGTGCGTGACCACGCTTTT-- 263
                       * *  * *   *    *   *  * *   *** **   ** ***  *   * *   **  

consensus_12714#1      GGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCT 1654
consensus_12714#2      GGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCT 418
consensus_12714#0      GGGAAGAGGATGGTTCAAGCATCTGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCT 1794
consensus_12714#3      ---------ATATTTCTTGC--TAGATGTACTCGCCTCCGGAGGACTACGAAAGCAAGCT 312
                                **  ***  **    ************************************

consensus_12714#1      CTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGA 1714
consensus_12714#2      CTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGA 478
consensus_12714#0      CTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGA 1854
consensus_12714#3      CTCGTTTTTCCCTGGGGTGGCGGACGCCATCTCCCGGTCGAGCAATCGAAGCGCGAAAGA 372
                       ************************************************************

consensus_12714#1      ACAGCAGGCGGCGGTGCGGCATGAG---------GTGCGGAAAATCTCTAGGGCAA---- 1761
consensus_12714#2      ACAGCAGGCGGCGGTGCGGCATGAGCAACTGCCGGTGCAGGAGCGCGGGCGGGCGGCGGC 538
consensus_12714#0      ACAGCAGGCGGCGGTGCGGCATGAG---------GTGCGGAAAATCTCTAGGGCAA---- 1901
consensus_12714#3      ACAGCAGGCGGCGGTGCGGCATGAG---------GTGCGGAAAATCTCTAGGGCAA---- 419
                       *************************         **** * *   *    ****      

consensus_12714#1      ------TCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTT 1815
consensus_12714#2      GCACCGTCGACGCAGCAGGCTACGACGTCTGCCGCGTGG-CAGCTGGAAGACTTCGCATC 597
consensus_12714#0      ------TCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTT 1955
consensus_12714#3      ------TCCAAAGAGCAGCTGATGTTCTTAGAGGCGAATTCAGTAATAGGAACGAATCTT 473
                             ** *   *****   * *   *  *  ***    ***    * **       * 

consensus_12714#1      TATACTCTAGCCTTTCTG--TGGCTCCATAAAA-----ACTGTGTATAAATAAAATCGA- 1867
consensus_12714#2      TGAATTCTCGTTTCCTTGATTGGCTTCACAACACGTCGACTGATGAGCGATGAGACAGAA 657
consensus_12714#0      TATACTCTAGCCTTTCTG--TGGCTCCATAAAA-----ACTGTGTATAAATAAAATCGAT 2008
consensus_12714#3      TATACTCTAGCCTTTCTG--TGGCTCCATAAAA-----ACTGTGTATAAATAAAATCGAT 526
                       *  * *** *  *   **  ***** ** ** *     ****   *   ** * *  ** 

consensus_12714#1      ------------------------------------------------
consensus_12714#2      ATCTGTA-ACATCTTCATGTAATAAAACTGCA---------------- 688
consensus_12714#0      TGGGGTT-GAGAAATGAAATCTTGTTCCTGCGCGAAAAAAGAAAAAGG 2055
consensus_12714#3      TGGGGTTTGAGAAATGAAATCTTGTTCCTGTGCGAAAAAAAAAAAAA- 573
                                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)