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Oryza sativa
cluster # 12821 cluster # 12821       Sequences # 11       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12821#0 length = 1595 sequences # 10  
consensus_12821#1 length = 635 sequences # 1  

consensusID : consensus_12821#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1595
fasta sequence
                              [CTCTCTCTCTGCTCGACTCCCTCTCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGACGGCAAGCGCGGCGACCCGACCGCCCGAGACCTAGCCTCCGCCACCGCAGAGCAGCTTGGGGGGGGGGGATGGAGAAGGGGGGCGCCGAGTCGTCGATCGCCTGCGCTCGCTGCGGCAAGCCGGCGTCGCTTCAATGCCCCAAGTGCGCGCAGCTGAAGCTTCTGCGGGAGGGCGCTGCTTTCTGCACACAGGATTGCTTCAAGGAAGCATGGAGCTCTCATAAGTCTGTCCACATAAAGCTAGATGCATTGACACTACAACAGACTCCAGAGGGTTGGCAATATTGTTTGAAAAAAGGGCGGACACGCACATCGCAGCTTCCTCGTTTTGATTGGACAGGTCCATTGAGACCATATCCAATATCAAAGATGTGTGTGGTACCAGATAAAATTGAGAAGCCTGATTGGGCGCTTGATGGAACCCCCAAGATTGAACCAGATAGCGATTTGCAGAAAAGAGTAGAGATCAAGACCCCTGAGCAAATTGAAAGGATGAGAGAAACATGCCGAATCGCAAGAGAAGTTTTAGATGCAGCTGCTCGCATAATCAAACCAGGAATTACAACAGATGAAATTGATAGAGTGGTTCATGAGGAGACAGTTGCTAGAGGTGGATATCCATCTCCATTGAATTACCATTTCTTCCCGAAGTCATGTTGCACGTCAGTCAATGAAGTCATC-TGCCAT-GGAATTCCAGA-TGCCAGGAAACTTGAAGAT-GGTGACATTGTAAATGTCGACGTAAC-TGTGTA-TTACAAA-GGAGTTCAT-GGTGA-TTTGAACGAGACATA-TTTTGTTGGAAATGTTG-ATGAAGCTTCCAAGCAGCTTGTCCGTTGTACCTATGAGTGCTTGGATAAAGCTATTGCAATAGTGAAACCTGGAGTTCGGTTTCGAGAGGTTGGGGAGATAATAAATAGACATGCATCTATGTCAGGTTTATCTGTGGTTAAGTCTTACTGTGGTCATGGCATAGGAGAATTGTTCCACTGTGCCCCAAATATTCCTCATTATTCAAGAAACAAGGCCGTGGGTATAATGAAAGCTGGACAAACATTTA-CAATTGAGCCAATGATAAA-CA-CA-GGAGTTTGGCATGA-CCG-TCTATGG-CCTGATGAGTGGA-CAG-CAGTGACTG-CAGATGGTAAA-CGGAGTGCTCAATTTGAGCA-CACCCTTTTGGTGACTGAAA-CA-GGAG-TTGAAGTTTTGACAGCGCGATTACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTATGCAC-AAACTAGCA-AGTGATACGAATACAA-TGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCA-G-TTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTCGAGTGACA-TGAATCATAATTTGAACTGGAAATGGGATTTA-TCCAGGAGCACATTTGTCGATAAAAAAAA]

[+] EMBL AK066207             [CTCTCTCTCTGCTCGACTCCCTCTCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGACGGCAAGCGCGGCGACCCGACCGCCCGAGACCTAGCCTCCGCCACCGCAGAGCAGCTTGGGGGGGGGGGATGGAGAAGGGGGGCGCCGAGTCGTCGATCGCCTGCGCTCGCTGCGGCAAGCCGGCGTCGCTTCAATGCCCCAAGTGCGCGCAGCTGAAGCTTCTGCGGGAGGGCGCTGCTTTCTGCACACAGGATTGCTTCAAGGAAGCATGGAGCTCTCATAAGTCTGTCCACATAAAGCTAGATGCATTGACACTACAACAGACTCCAGAGGGTTGGCAATATTGTTTGAAAAAAGGGCGGACACGCACATCGCAGCTTCCTCGTTTTGATTGGACAGGTCCATTGAGACCATATCCAATATCAAAGATGTGTGTGGTACCAGATAAAATTGAGAAGCCTGATTGGGCGCTTGATGGAACCCCCAAGATTGAACCAGATAGCGATTTGCAGAAAAGAGTAGAGATCAAGACCCCTGAGCAAATTGAAAGGATGAGAGAAACATGCCGAATCGCAAGAGAAGTTTTAGATGCAGCTGCTCGCATAATCAAACCAGGAATTACAACAGATGAAATTGATAGAGTGGTTCATGAGGAGACAGTTGCTAGAGGTGGATATCCATCTCCATTGAATTACCATTTCTTCCCGAAGTCATGTTGCACGTCAGTCAATGAAGTCATC TGCCAT GGAATTCCAGA TGCCAGGAAACTTGAAGAT GGTGACATTGTAAATGTCGACGTAAC TGTGTA TTACAAA GGAGTTCAT GGTGA TTTGAACGAGACATA TTTTGTTGGAAATGTTG ATGAAGCTTCCAAGCAGCTTGTCCGTTGTACCTATGAGTGCTTGGATAAAGCTATTGCAATAGTGAAACCTGGAGTTCGGTTTCGAGAGGTTGGGGAGATAATAAATAGACATGCATCTATGTCAGGTTTATCTGTGGTTAAGTCTTACTGTGGTCATGGCATAGGAGAATTGTTCCACTGTGCCCCAAATATTCCTCATTATTCAAGAAACAAGGCCGTGGGTATAATGAAAGCTGGACAAACATTTA CAATTGAGCCAATGATAAA CA CA GGAGTTTGGCATGA CCG TCTATGG CCTGATGAGTGGA CAG CAGTGACTG CAGATGGTAAA CGGAGTGCTCAATTTGAGCA CACCCTTTTGGTGACAGAAA CA GGAG TTGAAGTTTTGACAGCGCGATTACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTATGCAC AAACTAGCA AGTGATACGAATACAA TGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCA G TTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTCGAGTGACA TGAATCATAATTTGAACTGGAAATGGGATTTA TCCAGGAGC                    ]
[+] EMBL C26735               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GAGAAGCCTGATTGGGCGCTTGATGGAACCCCCAAGATTGAACCAGATAGCGATTTGCAGAAAAGAGTAGAGATCAAGACCCCTGAGCAAATTGAAAGGATGAGAGAAACATGCCGAATCGCAAGAGAAGTTTTAGATGCAGCTGCTCGCATAATCAAACCAGGAATTACAACAGATGAAATTGATAGAGTGGTTCATGAGGAGACAGTTGCTAGAGGTGGATATCCATCTCCATTGAATTACCATTTCTTCCCGAAGTCATGTTGCACGTCAGTCAATGAAGTCATCTTGCCATNGGAATTCCAGATTGCCAGGGAACTTGAAGATGGGTGACATTGTAAATGTCGACGTAACTTGTGTATTTACAAAGGGAGTTCATGGGTGATTTTGACCGGGACATATTTTTGTTGGGAATGTTGNATGAGGCTTCCAg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB632129             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAGCCTTTAGCTAGAGGTGGATATCCATCTCCATTGAATTACCATTTCTTCCCGAAGTCATGTTGCACGTCAGTCAATGAAGTCATC TGCCAT GGAATTCCAGA TGCCAGGAAACTTGAAGAT GGTGACATTGTAAATGTCGACGTAAC TGTGTA TTACAAA GGAGTTCAT GGTGA TTTGAACGAGACATA TTTTGTTGGAAATGTTG ATGAAGCTTCCAAGCAGCTTGTCCGTTGTACCTATGAGTGCTTGGATAAAGCTATTGCAATAGTGAAACCTGGAGTTCGGTTTCGAGAGGTTGGGGAGATAATAAATAGACATGCATCTATGTCAGGTTTATCTGTGGTTAAGTCTTACTGTGGTCATGGCATAGGAGAATTGTTCCACTGTGCCCCAAATATTCCTCATTATTCAAGAAACAAGGCCGTGGGTATAATGAAAGCTGGACAAACATTTA CAATTGAGCCAATGATAAA CA CA GGAGTTTGGCATGA CCG TCTATGG CCTGATGAGTGGA CAG CAGTGACTG CAGATGGTAAA CGGAGTGCTCAATTTGAGCA CACCCTTTTGGTGACTGAAA CA GGAG TTGAAGTTTTGACAGCGCGATTACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTATGCAC AAACTAGCA AGTGATACGAATACAA TGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCA G TTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGGTAGTTCTGAC                                                                                                                                             ]
[-] EMBL CB653046             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTA TTACAAA GGAGTTCAT GGTGA TTTGAACGAGACATA TTTTGTTGGAAATGTTG ATGAAGCTTCCAAGCAGCTTGTCCGTTGTACCTATGAGTGCTTGGATAAAGCTATTGCAATAGTGAAACCTGGAGTTCGGTTTCGAGAGGTTGGGGAGATAATAAATAGACATGCATCTATGTCAGGTTTATCTGTGGTTAAGTCTTACTGTGGTCATGGCATAGGAGAATTGTTCCACTGTGCCCCAAATATTCCTCATTATTCAAGAAACAAGGCCGTGGGTATAATGAAAGCTGGACAAACATTTA CAATTGAGCCAATGATAAA CA CA GGAGTTTGGCATGA CCG TCTATGG CCTGATGAGTGGA CAG CAGTGACTG CAGATGGTAAA CGGAGTGCTCAATTTGAGCA CACCCTTTTGGTGACAGAAA CA GGAG TTGAAGTTTTGACAGCGCGATTACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTATGCAC AAACTAGCA AGTGATACGAATACAA TGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCA G TTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTCGAGTGACA TGAATCATAATTGGAACTGGAAATGGGATTTA                              ]
[-] EMBL CB632130             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGTTGGAAATGTTG ATGAAGCTTCCAAGCAGCTTGTCCGTTGTACCTATGAGTGCTTGGATAAAGCTATTGCAATAGTGAAACCTGGAGTTCGGTTTCGAGAGGTTGGGGAGATAATAAATAGACATGCATCTATGTCAGGTTTATCTGTGGTTAAGTCTTACTGTGGTCATGGCATAGGAGAATTGTTCCACTGTGCCCCAAATATTCCTCATTATTCAAGAAACAAGGCCGTGGGTATAATGAAAGCTGGACAAACATTTC CAATTGAGCCAATGATAAA CA CA GGAGTTTGGCATGC CCG TTTATGG CCTGATGAGTGGA CAG CAGTGACTG CAGATGGTAAA CGGAGTGCTCAATTTGAGCC CCCCCTTTTGGTGACTGAAA CA GGAG TTGAAGTTTTGACAGCGCGATTCCCGTCATCCCCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTATGCAC AAACTAGCA AGTGATACGAATACAA TGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCA G TTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATCCCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCCCCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTGGAGTGACA TGAATCATAATTGGAACTGGAAATGG                                    ]
[+] EMBL BQ906178             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cACAAACATTTACCAATTGACCCAATGATAAACCACCACGGAGTTTGGCATGACCCGTTCTATGGCCCTGATGAGTGGACCAGCCAGTGACTGCCAGATGGTAAACCGGAGTGCTCAATTTGAGCACCACCCTTTTGGTGACTGAAACCA GGAGCTTGAAGTTTTGACAGCGCGATTACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTATGCAC AAACTAGCA AGTGATACGAATACAACTGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCACGCTTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTCGAGTGACA TGAATCATAATTTGAACTGGAAATGGGATTTACCCCAGGAGCACATTTGTCGATAAAAAAAA]
[+] EMBL AU166499             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTGGCATGA CCG TCTATGG CCTGATGAGTGGA CAG CAGTGACTG CAGATGGTAAA CGGAGTGCTCAATTTGAGCA CACCCTTTTGGTGACAGAAA CA GGAG TTGAAGTTTTGACAGCGCGATTACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTATGCAC AAACTAGCA AGTGATACGAATACAA TGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCA G TTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTCGAGTGACA TGAATCATAATTTGAACTGGAAATGGGATTTA TCCAaaaaaaa                  ]
[+] EMBL BI808758             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CG TCTATGG CCTGATGAGTGGA CAG CAGTGACTG CAGATGGTAAA CGGAGTGCTCAATTTGAGCA CACCCTTTTGGTGACTGAAA CA GGAG TTGAAGTTTTGACAGCGCGATTACCGTCATCACCTGATGTCTTTCCATGGTTGAA CCGTGACGCCATTGCTCCAGGCATTATGCAC  AACTAGCA AGTGATACGAATAC A TGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCA G TTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGTTAGTTCTGACGACTTGCTGCAACC CTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTCGAGTGACA TGAATCATAATTTGAACTGGAAAaaaa                                   ]
[+] EMBL BM420712             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGGTAAA CGGAGTGCTCAATTTGAGCA CACCCTTTTGGTGACTGAAA CANGGAG TTGAAGTTTTGACAGCGCGATTACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCCTTGCTCCAGGCATTATGCACNNAACTAGCACAGTGATACGAATAC A TGTGGTCAATGGGACAACACNATTTTTCAATTTACTCTTTTTATCATTCA G TTGCCCAACTCTCCGAAGCAGATATTGTCCCCGTGATAATACCTGTTAGTTCTGACGACTTGCTGCAACCCCTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTCGAGTGACACTGAATCATAATTTGAACTGGAAATGGGATTTA TCCAGGAGCACATTTGTCGATAA      ]
[+] EMBL AF522001             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTAGCA AGTGATACGAATACAA TGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCG G TTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTCGAGTGACA TGAATCATAATTTGAACTGGAAATGGGATTTA TCCAGGAGCAC                  ]


>consensus_12821#0 CTCTCTCTCTGCTCGACTCCCTCTCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGACGG CAAGCGCGGCGACCCGACCGCCCGAGACCTAGCCTCCGCCACCGCAGAGCAGCTTGGGGG GGGGGGATGGAGAAGGGGGGCGCCGAGTCGTCGATCGCCTGCGCTCGCTGCGGCAAGCCG GCGTCGCTTCAATGCCCCAAGTGCGCGCAGCTGAAGCTTCTGCGGGAGGGCGCTGCTTTC TGCACACAGGATTGCTTCAAGGAAGCATGGAGCTCTCATAAGTCTGTCCACATAAAGCTA GATGCATTGACACTACAACAGACTCCAGAGGGTTGGCAATATTGTTTGAAAAAAGGGCGG ACACGCACATCGCAGCTTCCTCGTTTTGATTGGACAGGTCCATTGAGACCATATCCAATA TCAAAGATGTGTGTGGTACCAGATAAAATTGAGAAGCCTGATTGGGCGCTTGATGGAACC CCCAAGATTGAACCAGATAGCGATTTGCAGAAAAGAGTAGAGATCAAGACCCCTGAGCAA ATTGAAAGGATGAGAGAAACATGCCGAATCGCAAGAGAAGTTTTAGATGCAGCTGCTCGC ATAATCAAACCAGGAATTACAACAGATGAAATTGATAGAGTGGTTCATGAGGAGACAGTT GCTAGAGGTGGATATCCATCTCCATTGAATTACCATTTCTTCCCGAAGTCATGTTGCACG TCAGTCAATGAAGTCATCTGCCATGGAATTCCAGATGCCAGGAAACTTGAAGATGGTGAC ATTGTAAATGTCGACGTAACTGTGTATTACAAAGGAGTTCATGGTGATTTGAACGAGACA TATTTTGTTGGAAATGTTGATGAAGCTTCCAAGCAGCTTGTCCGTTGTACCTATGAGTGC TTGGATAAAGCTATTGCAATAGTGAAACCTGGAGTTCGGTTTCGAGAGGTTGGGGAGATA ATAAATAGACATGCATCTATGTCAGGTTTATCTGTGGTTAAGTCTTACTGTGGTCATGGC ATAGGAGAATTGTTCCACTGTGCCCCAAATATTCCTCATTATTCAAGAAACAAGGCCGTG GGTATAATGAAAGCTGGACAAACATTTACAATTGAGCCAATGATAAACACAGGAGTTTGG CATGACCGTCTATGGCCTGATGAGTGGACAGCAGTGACTGCAGATGGTAAACGGAGTGCT CAATTTGAGCACACCCTTTTGGTGACTGAAACAGGAGTTGAAGTTTTGACAGCGCGATTA CCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTAT GCACAAACTAGCAAGTGATACGAATACAATGTGGTCAATGGGACAACACAATTTTTCAAT TTACTCTTTTTATCATTCAGTTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAAT ACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCTG TGTTAAGTATTTTGATTGATTTGTTCGAGTGACATGAATCATAATTTGAACTGGAAATGG GATTTATCCAGGAGCACATTTGTCGATAAAAAAAA



consensusID : consensus_12821#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 635
fasta sequence
                              [GAGACAAGGGCCAGGGTTATCGGTGGTAGAGTCTTACCGGGGTCATGGCATAGGAGAATTGTTCCACCTGGCCCACGAATATGCCTCGTTATTCAAGAAACAAGGCCGTGGGTATAATGAAAGCTGGGCAAACATTTATAATTGAGCCAATGATAAACACAGGAGTTTGGCATGACCGTCTATGGCCTGATGAGTGGACACCAGTGACTGCAGATGGTAAACGGAGTGCTCAATTTGAGCACACCCTTTTGGTGACTGAAACAGGAGTTGAAGTTTTGACAGCGCGATTACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTATGCACAAACTAGCAAGTGATACGAATACAATGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCAGTTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTCGAGTGACATGAATCATAATTTGAACTGGAAATGGGATTTATCCAGGAGCCCATTTGTCGATAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763010             [GAGACAAGGGCCAGGGTTATCGGTGGTAGAGTCTTACCGGGGTCATGGCATAGGAGAATTGTTCCACCTGGCCCACGAATATGCCTCGTTATTCAAGAAACAAGGCCGTGGGTATAATGAAAGCTGGGCAAACATTTATAATTGAGCCAATGATAAACACAGGAGTTTGGCATGACCGTCTATGGCCTGATGAGTGGACACCAGTGACTGCAGATGGTAAACGGAGTGCTCAATTTGAGCACACCCTTTTGGTGACTGAAACAGGAGTTGAAGTTTTGACAGCGCGATTACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTATGCACAAACTAGCAAGTGATACGAATACAATGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTTTATCATTCAGTTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTATTTTGATTGATTTGTTCGAGTGACATGAATCATAATTTGAACTGGAAATGGGATTTATCCAGGAGCCCATTTGTCGATAAAAAAAAAAAAAAAAAA]


>consensus_12821#1 GAGACAAGGGCCAGGGTTATCGGTGGTAGAGTCTTACCGGGGTCATGGCATAGGAGAATT GTTCCACCTGGCCCACGAATATGCCTCGTTATTCAAGAAACAAGGCCGTGGGTATAATGA AAGCTGGGCAAACATTTATAATTGAGCCAATGATAAACACAGGAGTTTGGCATGACCGTC TATGGCCTGATGAGTGGACACCAGTGACTGCAGATGGTAAACGGAGTGCTCAATTTGAGC ACACCCTTTTGGTGACTGAAACAGGAGTTGAAGTTTTGACAGCGCGATTACCGTCATCAC CTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTATGCACAAACTA GCAAGTGATACGAATACAATGTGGTCAATGGGACAACACAATTTTTCAATTTACTCTTTT TATCATTCAGTTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAATACCTGTTAGT TCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCTGTGTTAAGTAT TTTGATTGATTTGTTCGAGTGACATGAATCATAATTTGAACTGGAAATGGGATTTATCCA GGAGCCCATTTGTCGATAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12821#0      CTCTCTCTCTGCTCGACTCCCTCTCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGACGG 60
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      CAAGCGCGGCGACCCGACCGCCCGAGACCTAGCCTCCGCCACCGCAGAGCAGCTTGGGGG 120
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      GGGGGGATGGAGAAGGGGGGCGCCGAGTCGTCGATCGCCTGCGCTCGCTGCGGCAAGCCG 180
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      GCGTCGCTTCAATGCCCCAAGTGCGCGCAGCTGAAGCTTCTGCGGGAGGGCGCTGCTTTC 240
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      TGCACACAGGATTGCTTCAAGGAAGCATGGAGCTCTCATAAGTCTGTCCACATAAAGCTA 300
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      GATGCATTGACACTACAACAGACTCCAGAGGGTTGGCAATATTGTTTGAAAAAAGGGCGG 360
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      ACACGCACATCGCAGCTTCCTCGTTTTGATTGGACAGGTCCATTGAGACCATATCCAATA 420
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      TCAAAGATGTGTGTGGTACCAGATAAAATTGAGAAGCCTGATTGGGCGCTTGATGGAACC 480
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      CCCAAGATTGAACCAGATAGCGATTTGCAGAAAAGAGTAGAGATCAAGACCCCTGAGCAA 540
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      ATTGAAAGGATGAGAGAAACATGCCGAATCGCAAGAGAAGTTTTAGATGCAGCTGCTCGC 600
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      ATAATCAAACCAGGAATTACAACAGATGAAATTGATAGAGTGGTTCATGAGGAGACAGTT 660
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      GCTAGAGGTGGATATCCATCTCCATTGAATTACCATTTCTTCCCGAAGTCATGTTGCACG 720
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      TCAGTCAATGAAGTCATCTGCCATGGAATTCCAGATGCCAGGAAACTTGAAGATGGTGAC 780
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      ATTGTAAATGTCGACGTAACTGTGTATTACAAAGGAGTTCATGGTGATTTGAACGAGACA 840
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      TATTTTGTTGGAAATGTTGATGAAGCTTCCAAGCAGCTTGTCCGTTGTACCTATGAGTGC 900
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      TTGGATAAAGCTATTGCAATAGTGAAACCTGGAGTTCGGTTTCGAGAGGTTGGGGAGATA 960
consensus_12821#1      ------------------------------------------------------------
                                                                                   

consensus_12821#0      ATAAATAGACATGCATCTATGTCAGGTTTATCTGTGGTTAAGTCTTACTGTGGTCATGGC 1020
consensus_12821#1      -----------GAGACAAGGGCCAGGGTTATCGGTGGTAGAGTCTTACCGGGGTCATGGC 49
                                     *     * **** ***** *****  ******** * *********

consensus_12821#0      ATAGGAGAATTGTTCCACTGTGCCC-CAAATATTCCTCATTATTCAAGAAACAAGGCCGT 1079
consensus_12821#1      ATAGGAGAATTGTTCCACCTGGCCCACGAATATGCCTCGTTATTCAAGAAACAAGGCCGT 109
                       ******************   **** * ***** **** *********************

consensus_12821#0      GGGTATAATGAAAGCTGGACAAACATTTACAATTGAGCCAATGATAAACACAGGAGTTTG 1139
consensus_12821#1      GGGTATAATGAAAGCTGGGCAAACATTTATAATTGAGCCAATGATAAACACAGGAGTTTG 169
                       ****************** ********** ******************************

consensus_12821#0      GCATGACCGTCTATGGCCTGATGAGTGGACAGCAGTGACTGCAGATGGTAAACGGAGTGC 1199
consensus_12821#1      GCATGACCGTCTATGGCCTGATGAGTGGACACCAGTGACTGCAGATGGTAAACGGAGTGC 229
                       ******************************* ****************************

consensus_12821#0      TCAATTTGAGCACACCCTTTTGGTGACTGAAACAGGAGTTGAAGTTTTGACAGCGCGATT 1259
consensus_12821#1      TCAATTTGAGCACACCCTTTTGGTGACTGAAACAGGAGTTGAAGTTTTGACAGCGCGATT 289
                       ************************************************************

consensus_12821#0      ACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTA 1319
consensus_12821#1      ACCGTCATCACCTGATGTCTTTCCATGGTTGAAGCCGTGACGCCATTGCTCCAGGCATTA 349
                       ************************************************************

consensus_12821#0      TGCACAAACTAGCAAGTGATACGAATACAATGTGGTCAATGGGACAACACAATTTTTCAA 1379
consensus_12821#1      TGCACAAACTAGCAAGTGATACGAATACAATGTGGTCAATGGGACAACACAATTTTTCAA 409
                       ************************************************************

consensus_12821#0      TTTACTCTTTTTATCATTCAGTTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAA 1439
consensus_12821#1      TTTACTCTTTTTATCATTCAGTTGCCCAACTCTCCGAAGCAGATATTGTCCCAGTGATAA 469
                       ************************************************************

consensus_12821#0      TACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCT 1499
consensus_12821#1      TACCTGTTAGTTCTGACGACTTGCTGCAACCACTGTTCACCTAGCAAGTTGTTTCTGGCT 529
                       ************************************************************

consensus_12821#0      GTGTTAAGTATTTTGATTGATTTGTTCGAGTGACATGAATCATAATTTGAACTGGAAATG 1559
consensus_12821#1      GTGTTAAGTATTTTGATTGATTTGTTCGAGTGACATGAATCATAATTTGAACTGGAAATG 589
                       ************************************************************

consensus_12821#0      GGATTTATCCAGGAGCACATTTGTCGATAAAAAAAA---------- 1595
consensus_12821#1      GGATTTATCCAGGAGCCCATTTGTCGATAAAAAAAAAAAAAAAAAA 635
                       **************** *******************          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)