These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12875#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1893 fasta sequence [ACCACCGCCGAATGCCGCATCTCCCGACATCCGGCTCCCGCGAACTCATCCCCCCTTTCCACGGTTTCCGTCGATCGAAACCCTAACCCTAGGGTATAGAGAGGATGAGGCCCTCGGCGGCGGCGGGCGGCGGCGGCGGCGGCGGCGGGAGGCGGAAAGCGGCGGCGGCGGCGGCCGCGGCGAGCCGGGAGTGGCTGGTCGTGCCGGCGTCGGGGCAGGCGCGGGTGGAGGAGGCCGGGAAGCACGCGGTGATGGCGCGGACGGGGCTGCCGGCGCGCGACCTGCGGGTGCTGGACCCGCTGCTGTCGTACCCTTCCACGATCCTGGGTCGCGAGCGCGCCATCGTCGTCAACCTGGAGCGCGTCAAGGCCGTGATCACCGCCGCCGAGGTGCTGCTCCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCGCGTCCTCGCCTCGTCCTCCGACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCTGGTCGTGTGCAGAAGGTGAGGGATGAACTTGAGCATTTGTTGGATGATGAAATGGACATGGCTGAAATGTATTTGACAGAAAAGCTTACTCGACAAGAAATAAGTGAGACTTCATCTAGAGTTGAGGTTGATGACCCATCTCAACTGGAGGTGGATAGGGATGAAGATTATAGAAGTGAGGCAGATGTAAGCAATGGTACCTTTATTGGCTATAAGCCACACATTGAAGAACTGGAGATGCTTTTGGAGGCCTACTTTGTTCAAATTGATGGCACACTTAATAAGCTATCTCATCTGAGAGAGTATGTTGATGATACAGAAGATTATATCAACATCATGTTGGATGACAAGCAAAATCAACTTCTACAGATGGGGGTCATGCTCTCCACTGCAACTGTTGTCATTACTGCTGGAGTGGCCGTTGTTGGTCTTTTTGGGATGAATATC-GGTATATCGCTTTATGCTGATCCTACA-AATGA-GGAGGAGAAACGAGCATCAAACATGAAATTTTGGGAAACCA-CTTTGGGAACCA-TTGCTGGCTGCACGGTTATGTACATAGTAGCCATGGGTTGGGGGAAGAGAAGTGGACTGCTGCAATAATGAGGGTGCCACGATGAATCACACAAGTTGACGATTGCTAGCCTGGTCAGACA-AAGCTCTATAAACA-AGAAGACAACATAGGGCTCGACTGTATACCTCCTTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAA-GGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACAATGTAACTCGGTTTTTGATATTTCGGATGG-TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTG-CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTAGTACATCATATTCATAAGGAAGTACTAAGAGCA-TGTCTTATCTGAAGGGTTAGTATGAGCTGTAAATG-AACA-TGTTATTCATAGGGAAATACTAAGAACTGTGAATGAAAAA] [+] EMBL AK120875 [ACCACCGCCGAATGCCGCATCTCCCGACATCCGGCTCCCGCGAACTCATCCCCCCTTTCCACGGTTTCCGTCGATCGAAACCCTAACCCTAGGGTATAGAGAGGATGAGGCCCTCGGCGGCGGCGGGCGGCGGCGGCGGCGGCGGCGGGAGGCGGAAAGCGGCGGCGGCGGCGGCCGCGGCGAGCCGGGAGTGGCTGGTCGTGCCGGCGTCGGGGCAGGCGCGGGTGGAGGAGGCCGGGAAGCACGCGGTGATGGCGCGGACGGGGCTGCCGGCGCGCGACCTGCGGGTGCTGGACCCGCTGCTGTCGTACCCTTCCACGATCCTGGGTCGCGAGCGCGCCATCGTCGTCAACCTGGAGCGCGTCAAGGCCGTGATCACCGCCGCCGAGGTGCTGCTCCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCGCGTCCTCGCCTCGTCCTCCGACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCTGGTCGTGTGCAGAAGGTGAGGGATGAACTTGAGCATTTGTTGGATGATGAAATGGACATGGCTGAAATGTATTTGACAGAAAAGCTTACTCGACAAGAAATAAGTGAGACTTCATCTAGAGTTGAGGTTGATGACCCATCTCAACTGGAGGTGGATAGGGATGAAGATTATAGAAGTGAGGCAGATGTAAGCAATGGTACCTTTATTGGCTATAAGCCACACATTGAAGAACTGGAGATGCTTTTGGAGGCCTACTTTGTTCAAATTGATGGCACACTTAATAAGCTATCTCATCTGAGAGAGTATGTTGATGATACAGAAGATTATATCAACATCATGTTGGATGACAAGCAAAATCAACTTCTACAGATGGGGGTCATGCTCTCCACTGCAACTGTTGTCATTACTGCTGGAGTGGCCGTTGTTGGTCTTTTTGGGATGAATATC GGTATATCGCTTTATGCTGATCCTACA AATGA GGAGGAGAAACGAGCATCAAACATGAAATTTTGGGAAACCA CTTTGGGAACCA TTGCTGGCTGCACGGTTATGTACATAGTAGCCATGGGTTGGGGGAAGAGAAGTGGACTGCTGCAATAATGAGGGTGCCACGATGAATCACACAAGTTGACGATTGCTAGCCTGGTCAGACA AAGCTCTATAAACA AGAAGACAACATAGGGCTCGACTGTATACCTCCTTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAA AGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACAATGTAACTCGGTTTTTGATATTTCGGATGG TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTG CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTATTACATCAT ] [+] EMBL CB648452 [ GATCGACCCCCTAACCCTAGGGTATAGAGAGGATGAGGCCCTCGGCGGCGGCGGGCGGCGGCGGCGGCGGCGGCGGGAGGCGGAAAGCGGCGGCGGCGGCGGCCGCGGCGAGCCGGGAGTGGCTGGTCGTGCCGGCGTCGGGGCAGGCGCGGGTGGAGGAGGCCGGGAAGCACGCGGTGATGGCGCGGACGGGGCTGCCGGCGCGCGACCTGCGGGTGCTGGACCCGCTGCTGTCGTACCCTTCCACGATCCTGGGTCGCGAGCGCGCCATCGTCGTCAACCTGGAGCGCGTCAAGGCCGTGATCACCGCCGCCGAGGTGCTGCTCCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCGCGTCCTCGCCTCGTCCTCCGACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCT ] [+] EMBL CB639472 [ CGGAAAGCGGCGGCGGCGGCGGCCGCGGCGAGCCGGGAGTGGCTGGTCGTGCCGGCGTCGGGGCAGGCGCGGGTGGAGGAGGCCGGGAAGCACGCGGTGATGGCGCGGACGGGGCTGCCGGCGCGCGACCTGCGGGTGCTGGACCCGCTGCTGTCGTACCCTTCCACGATCCTGGGTCGCGAGCGCGCCATCGTCGTCAACCTGGAGCGCGTCAAGGCCGTGATCACCGCCGCCGAGGTGCTGCTCCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCGCGTCCTCGCCTCGTCCTCCGACCATGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTTACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTGTGCCCACA ] [+] EMBL CB669655 [ CGTCAACCCGTAGCGCGTCAAGGCCGTGATCACCGCCGCCGAGGTGCTGCTCCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCGCGTCCTCGCCTCGTCCTCCGACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCTGGTCGTGTGCAGAAGGTGAGGGATGAACTTGAGCATTTGTTGGATGATGAAATGGACATGGCTGAAATGTATTTGACAGAAAAGCTTACTCGACAAGAAATAAGTGAGACTTCATCTAGAGTTGAGGTTGATGACCCATCTCAACTGGAGGTGGATAGGGATGAAGATTATAGAAGTGAGGCAGATGTAAGCAATGGTACCTTTATTGGCTATAAGCCACACATTGAAGAACTGGAGATGCTTTTGGAGGCCTACTTTGTTCAAATTGATGGCACACTTAATAAGCTATCTCATCTGAGAGAGTATGTTGATGATACAGAAGATTATATCAACATCATGTTGGATGACAAGCAAAATCCACTTCTACAGATGGG ] [+] EMBL AK072213 [ CCCGAACTCCAAGGACCCCGCCTTCGCGAGCTTTGTCTGCGACCTGCAGGCCCACGTCCTCGCCTCGTCCTCCGACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCTGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCTGGTCGTGTGCAGAAGGTGAGGGATGAACTTGAGCATTTGTTGGATGATGAAATGGACATGGCTGAAATGTATTTGACAGAAAAGCTTACTCGACAAGAAATAAGTGAGACTTCATCTAGAGTTGAGGTTGATGACCCATCTCAACTGGAGGTGGATAGGGATGAAGATTATAGAAGTGAGGCAGATGTAAGCAATGGTACCTTTATTGGCTATAAGCCACACATTGAAGAACTGGAGATGCTTTTGGAGGCCTACTTTGTTCAAATTGATGGCACACTTAATAAGCTATCTCATCTGAGAGAGTATGTTGATGATACAGAAGATTATATCAACATCATGTTGGATGACAAGCAAAATCAACTTCTACAGATGGGGGTCATGCTCTCCACTGCAACTGTTGTCATTACTGCTGGAGTGGCCGTTGTTGGTCTTTTTGGGATGAATATC GGTATATCGCTTTATGCTGATCCTACA AATGA GGAGGAGAAACGAGCATCAAACATGAAATTTTGGGAAACCA CTTTGGGAACCA TTGCTGGCTGCACGGTTATGTACATAGTAGCCATGGGTTGGGGGAAGAGAAGTGGACTGCTGCAATAATGAGGGTGCCACGATGAATCACACAAGTTGACGATTGCTAGCCTGGTCAGACA AAGCTCTATAAACA AGAAGACAACATAGGGCTCGACTGTATACCTCCTTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAA GGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACAATGTAACTCGGTTTTTGATATTTCGGATGG TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTG CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTATTACATCATATTCATAAGGAAGTACTAAGAGCA TGTCTTATCTGAAGGGTTAGTATGAGCTGTAAATG AACA TGTTATTCATAGGGAAATACTAAGA ] [+] EMBL AY224580 [ GACCAGGCTGCAGAATTTACTGATATGGAAGGCGAATCATCAGCAGTTACTTCACCATTTCCTGCTCTGACTTCAACCACACCAAATGAATTGGAGATGACTAACAAGAATTCCAATGTGGTAGGCGGAATGACTCACAGCAACAGTATGCCCACATTGACTGCTGCAAAAGATGGAAATACCAAAGTTTTACCCTTCGAATTCCGAGCACTTGAAGTGTGCCTTGAGTCAGCCTGTAGAAGCCTAGAAGAGGAAACGTCGACTCTGGAGCAAGAGGCGTATCCGGCACTTGATGAGCTGACTTCAAAGATAAGCACACTAAATCTTGAGCGAGTTAGGCAAATTAAGAGCCGCCTGGTTGCAATCTCTGGTCGTGTGCAGAAGGTGAGGGATGAACTTGAGCATTTGTTGGATGATGAAATGGACATGGCTGAAATGTATTTGACAGAAAAGCTTA ] [-] EMBL CB648453 [ GATGATACAGAAGATTATATCAACATCATGTTGGATGACAAGCAAAATCAACTTCTACAGATGGGGGTCATGCTCTCCACTGCAACTGTTGTCATTACTGCTGGAGTGGCCGTTGTTGGTCTTTTTGGGATGAATATC GGTATATCGCTTTATGCTGATCCTACA AATGA GGAGGAGAAACGAGCATCAAACATGAAATTTTGGGAAACCC CTTTGGGAACCA TTGCTGGCTGCACGGTTATGTACATAGTAGCCATGGGTTGGGGGAAGAGAAGTGGACTGCTGCAATAATGAGGGTGCCCCGATGAATCACCCAAGTTGACGATTGCTAGCCTGGTCAGACA AAGCTCTATAAACA AGAAGACAACATAGGGCTCGACTGTATACCTCCTTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAA GGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACAATGTAACTCGGTTTTTGATATTTCGGATGG TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATGGTTTGTG CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTATTACCTCATATTTTTAAGGGAGTACTAAGAG ] [+] EMBL BI807813 [ tgTGTTC TTTTGGGATGAATATCGGGTATTTTCCTTTATGCTGATCCTACACAATGAGGGAGGAGAAACGAGCATCAAACATGAAATTTTGGGAAACCACCTTTGGGAACCACTTGCTGGCTGCACGGTTATGTACATAGTA CCAT GGTT GGGGAAGAGAAGTGGACT CTGCAATAATGAGGGTTCCACGATGAATCACACAAGTTGACGATTGCTAGCCTGGTCAGACACAAGCTCTATAAACACAGAAGACAACATAGGGCTCGACTGTATACCTCCGTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAA GGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACCATGTAACTCGGTTTTTGATATTTCGGATGG TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTG CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTAGTACATCATATTCATAAGGAAGTACTAAGAGCA TGTCTTATCTGAAGGGTTAGTATGAGCTGTAAATG ACA TGTTATTCATAGGGAAATACTAA ] [+] EMBL AU165029 [ CTGTATACCTCCTTGAACATATATAACTGTTGCTCTGATGGCTTGCATGTGCAAGGGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAACAATGTAACTCGGTTTTTG ATTTCGGATGG TTGCACGATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTG CTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTAGTACATCATATTCATAAGGAAGTACTAAGAGCA TGTCTTATCTGAAaaa ] [-] EMBL AU165030 [ TGTATACCTCCTTGAAAAAAAAAAAACGTTGCTTTGATGGCTTGCATGTGCAA GGAACAGAGATGAAAAGGAAGCGATCTTTTTAGCAACTTTGCGCGGCGATGCATGATGTAACTGAGAGATGGATAACAATGTAACTCGGTTTTTG ATTTCGGATGG TTGCACGATTGCTTGTTTGCAAGCCGTTGTACTAATAGTTTGTG CTGTTGTTGGATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTAGTACATCAAATTCATAAGGAAGTACTAAGAGCA TGTCTTATCTGAAaaaa ] [+] EMBL BI800114 [ CTTTTTAGCAACTCTGCGCGGCGATGCATGATGTAACTGAGAGATGTATAAC ATGTAACTCGGTTTTTGATATTTCGGATGGCTTGCACCATTGCTTGTCTGCAAGCCGTCGTACTAATAGTTTGTGCCTGTTGTCGTATGTATCTGTAAGCTTCTTGGAAGCTGTAAATGAACTAGTACATCATATTCATAAGGAAGTACTAAGAGCACTGTCTTATCTGAAGGGTTAGTATGACCTGTAAATGAAACACTGTTATTCATAGGGAAATACTAAGAACTGTGAATGAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||