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Oryza sativa
cluster # 12914 cluster # 12914       Sequences # 11       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12914#0 length = 1249 sequences # 8  
consensus_12914#1 length = 442 sequences # 1  
consensus_12914#2 length = 313 sequences # 2  

consensusID : consensus_12914#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1249
fasta sequence
                              [AGAATTGCATATTAAAGCCTCCCATCAACTTCTTGCACACACCCTCCCTTTGGCTTTCATCTGCATCTATTCAGTTGCAGATTGAGAGCCAAAGACATTATCTTGATTCTATCAGGAGGGTTGTGCTAGCGAATTCTTGTTAGCAACAAATTGACATATTGCTCGGCACATCCCCACCGAGAATACCAAGATGACGTTCTCTGGTACACAGGACAAGTGCAATGCTTGTGACAAGACCGTGCATTTCATTGATCTCCTTACCGCGGACAGTATTCCCTACCACAAGTCTTGCTTCAGATGCAGCCACTGCAAAGGCACACTTTCGATGTGCAGCTATTC-GTCCATGGAT-GGGGTTCTTTACTGCAAGACCCA-TTTTG-AGCAGCTATTCAAGGAAACAGGCACCTTCAAGAAGAACTTCCCCTCAGGTACAAAGGCAAACAGT-GAACAGGCTAAGATT-CCCAGCAAGCTGTCCTCTGTG-TTCTGTGGAA-CCCAGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAAGATGACCATGGAGGGTGAGTGTTACCACAGGACCTGCTTCAAGTGCGCCCATGGCGGCTGCCTTCTGACGAACGCCTCCTACGCCTCGCACAACGGGATCCTCTACTG-CCAGAACCACTTCTGGCAGCTGTTCAAGAAGTCCGGCAGCTACGACAACCTGCTGAAGCCCGCCTCCGCCGCCGCCGAGAACACCGTCGAATCCGAGGTCGCCGTCGCGGAGCCCGCGAAGGAAGACCCGGAGACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTCACCGGAGCAGGTCGCGGAAGCTGTTGTAGAGGACCAGGAGCACTCATGAGAAGAACCTGCCACAGTGCCACTTGCACGCGCACACAGGAATATATATACATGTTCCCATATTACTGCTAATTTTTTTTGGTGTCGTTGAGAAACTTGTCGCTGGTTCTTCTCATCTTCTCGTCTGGATTCCTGCAATCCTGGAGTCTGTACCTGTGCTAAGATATCATGAATGAGAGCAGATTTTGCAAAGAAAGGGAGAAATATGCTCATTCTGATATTTTGACATGTATCATCCGTCTCAGAAAAATCAACTTCTCACTGCGAACATTGACATAATCTATGTCCAGGTTCATAGTTAGAAGTTGATTTTTAAGGATGATTTGGCAGCACCATTTTAAGAAGAAATATTTTATCTGGATCATGTGAGAATTGAGATGATAAT]

[+] EMBL AK072520             [AGAATTGCATATTAAAGCCTCCCATCAACTTCTTGCACACACCCTCCCTTTGGCTTTCATCTGCATCTATTCAGTTGCAGATTGAGAGCCAAAGACATTATCTTGATTCTATCAGGAGGGTTGTGCTAGCGAATTCTTGTTAGCAACAAATTGACATATTGCTCGGCACATCCCCACCGAGAATA CAAGATGACGTTCTCTGGTACACAGGACAAGTGCAATGCTTGTGACAAGACCGTGCATTTCATTGATCTCCTTACCGCGGACAGTATTCCCTACCACAAGTCTTGCTTCAGATGCAGCCACTGCAAAGGCACACTTTCGATGTGCAGCTATTC GTCCATGGAT GGGGTTCTTTACTGCAAGACCCA TTTTG AGCAGCTATTCAAGGAAACAGGCACCTTCAAGAAGAACTTCCCCTCAGGTACAAAGGCAAACAGT GAACAGGCTAAGATT CCCAGCAAGCTGTCCTCTGTG TTCTGTGGAA CCCAGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAAGATGACCATGGAGGGTGAGTGTTACCACAGGACCTGCTTCAAGTGCGCCCATGGCGGCTGCCTTCTGACGAACGCCTCCTACGCCTCGCACAACGGGATCCTCTACTG CCAGAACCACTTCTGGCAGCTGTTCAAGAAGTCCGGCAGCTACGACAACCTGCTGAAGCCCGCCTCCGCCGCCGCCGAGAACACCGTCGAATCCGAGGTCGCCGTCGCGGAGCCCGCGAAGGAAGACCCGGAGACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTCACCGGAGCAGGTCGCGGAAGCTGTTGTAGAGGACCAGGAGCACTCATGAGAAGAACCTGCCACAGTGCCACTTGCACGCGCACACAGGAATATATATACATGTTCCCATATTACTGCTAATTTTTTTTGGTGTCGTTGAGAAACTTGTCGCTGGTTCTTCTCATCTTCTCGTCTGGATTCCTGCAATCCTGGAGTCTGTACCTGTGCTAAGATATCATGAATGAGAGCAGATTTTGCAAAGAAAGGGAGAAATATGCTCATTCTGATATTTTGACATGTATCATCCGTCTCAGAAAAATCAACTTCTCACTGCGAACATTGACATAATCTATGTCCAGGTTCATAGTTAGAAGTTGATTTTTAAGGATGATTTGGCAGCACCATTTTAAGAAGAAATATTTTATCTGGATCATGTGAGAATTGAGATGATAAT]
[+] EMBL C71856               [              AAGCCTCCCATCAACTTCTTGCACACACCCTCCCTTTGGCTTTNATCTGCATCTATTCAGTTGCAGATTGAGAGCCAAAGACATTATCTTGATTCTATCAGGAGGGTTGTGCTAGCNAATTCTTGTTAGCAACAAATTGACATATTGCTCGGCACATCCCCACCGAGAATACCAAGATGACGTTCTCTGGTACACAGGACAAGTGCAATGCTTGTNACAAGACCGTGCATTTNATTGATCTCCTTACCGCGGACAGTATTCCCTACCACAAGTNTTGCTTCANATGCAGCCACTGCAAAGGCACACTTTCGATGTGCAGCTATTC GTCCATGGATGGGGGTTCTTTACTGCAAGACCCA TTTTG AGCAGCTATTCAAGGAAACAGGCACCTTCAAG AGGACTTTCCCTCAGGTAC AAGGC AACAGTGGACCAGGCTAggt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU063991             [                         CAACTTCTTGCACACACCCTCCCTTTGGCTTTCATCTGCATCTATTCAGTTGCAGATTGAGAGCCAAAGACATTATCTTGATTCTATCAGGAGGGTTGTGCTAGCGAATTCTTGTTAGCAACAAATTGACATATTGCTCGGCACATCCCCACCGAGAATACCAAGATGACGTTCTCTGGTACACAGGACAAGTGCAATGCTTGTGACAAGACCGTGCATTTCATTGATCTCCTTACCGCGGACAGTATTCCCTACCACAAGTCTTGCTTCAGATGCAGCCACTGCAAAGGCACACTTTCGATGTGCAGCTATTC GTCCATGGAT GGGGGTCTTTACTGCAAGACCCANTTTTG AGCAGC ATTCAAGGGAACAGGNACCTTCAAG AG ACTTCCCt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU063889             [                         CAACTTCTTGCACACACCCTCCCTTTGGCTTTCATCTGCATCTATTCAGTTGCAGATTGAGAGCCAAAGACATTATCTTGATTCTATCAGGAGGGTTGTGCTAGCGAATTCTTGTTAGCAACAAATTGACATATTGCTCGGCACATCCCCACCGAGAATACCAAGATGACGTTCTCTGGTACACAGGACAAGTGCAATGCTTGTGACAAGACCGTGCATTTCATTGATCTCCTTACCGCGGACAGTATTCCCTACCACAAGTCTTGCTTCAGATGCAGCCACTGCAAAGGCACACTTTCGATGTGCAGCTATTC GTCCATGGATGGGGGTTCTTTACTGCAAGACCCA TTTTG AGCAGCTATTCAAGGAAACAGGCACCTTCAAGAAG ACTTCCCCTCAGGTACAAAGGC AACAGT GAACAGGCTAAGATT  CCAGCAAGCTGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL C72613               [                           ACTTCTTGCACACACCCTCCCTTTGGCTTTCATCTGCATCTATTCAGTTGCAGATTGAGAGCCAAAGACATTATCTTGATTCTATCAGGAGGGTTGTGCTAGCGAATTCTTGTTAGCAACAAATTGACATATTGCTCGGCACATCCCCACCGAGAATACCAAGATGACGTTCTCTGGTACACAGGACAAGTGCAATGCTTGTGACAAGACCGTGCATTTCATTGATCTCCTTACCGCGGACAGTATTCCCTACCACAAGTCTTGCTTCAGATGCAGCCACTGCAAAGGCACACTTTCGATGTGCAGCTATTCGGTCCATGGAT GGGGGTCTTTACTGCAAGACCCA TTTTGAAGCAGCNA TCAAGGGAAAAGGGACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BP185090             [                                                                                                                                           TTAGCAACAAATTGACATATTGCTCGGCACATCCCCACCGAGAATACCAAGATGACGTTCTCTGGTACACAGGACAAGTGCAATGCTTGTGACAAGACCGTGCATTTCATTGATCTCCTTACCGCGGACAGTATTCCCTACCACAAGTCTTGCTTCAGATGCAGCCACTGCAAAGGCACACTTTCGATGTGCAGCTATTC GTCCATGGAT GGGGTTCTTTACTGCAAGACCCA TTTTG AGCAGCTATTCAAGGAAACAGGCACCTTCAAGAAGAACTTCCCCTCAGGTACAAAGGCAAACAGT GAACAGGCTAAGATT CCCAGCAAGCTGTCCTCTGTG TTCTGTGGAA CCCAGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAAGATGACCATGGAGGGTGAGTGTTACCACAGGACCTGCTTCAAGTGCGCCCATGGCGGCTGCCTTCTGACGAACGCCTCCTACGCCTCGCACAACGGGATCCTCTACTG CCAGAACCACTTCTGGCAGCTGTTCAAGAAGTCCGGCAGCTACGACAACCTGCTGAAGCCCGCCTCCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU093784             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                AACAGNCTAAGATTCCCCAGCAAGCTGTCCTCTGTGTTTCTGTGGAACCCCAGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAAGATGACCATGGAGGGTGA TGTTACCACAGGA CTGCTTCAAGTGCGCCCATGGCGGCTGCCTTCTGACGAACGCCTCTTACGCCTCGCACAACGGGATCCTCTACTGCCCAGAACCACTTCTGGCAGCTGTTCAAGAAGTCCGGCAGCTACGACAA CTGCTGAAGCCCGCCTCCGCCGCCGCCGAGAACACCGTCGAATCCGAGGTCNCCGTCGCGGAGCCCGCGAAGGAAGACCCGGAGACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTCACCGGAGCAGGTCGCGGAAGCTGTTGTAGAGGACCAGGAGCACTCATGAGAAGAACCTGCCACAGTGCCACTTGCACGCGCACACAGGAATATATATACATGTTCCCATATTACTGCTAATTTTTTTTGGTGTCGTTGAGAAACTTGTCGCTGGTTCTTCTCATCTTCTCGTCTGGATTCCTGCAATCCTGGAGTCTGTACCTGTGCTAAGATATCATGAATGAGAGCAGATTTTGCAAAaa                                                                                                                                                                                               ]
[+] EMBL AU165380             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   G TTCTGTGGAA CCCAGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAAGATGACCATGGAGGGTGAGTGTTACCACAGGACCTGCTTCAAGTGCGCCCATGGCGGCTGCCTTCTGACGAACGCCTCCTACGCCTCGCACAACGGGATCCTCTACTG CCAGAACCACTTCTGGCAGCTGTTCAAGAAGTCCGGCAGCTACGACAACCTGCTGAAGCCCGCCTCCGCCGCCGCCGAGAACACCGTCGAATCCGAGGTCGCCGTCGCGGAGCCCGCGAAGGAAGACCCGGAGACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTCACCGGAGCAGGTCGCGGAA CTGTTGTAGAGGACCAGGAGCACTCATGAGAAGAACCTGCCACA                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_12914#0 AGAATTGCATATTAAAGCCTCCCATCAACTTCTTGCACACACCCTCCCTTTGGCTTTCAT CTGCATCTATTCAGTTGCAGATTGAGAGCCAAAGACATTATCTTGATTCTATCAGGAGGG TTGTGCTAGCGAATTCTTGTTAGCAACAAATTGACATATTGCTCGGCACATCCCCACCGA GAATACCAAGATGACGTTCTCTGGTACACAGGACAAGTGCAATGCTTGTGACAAGACCGT GCATTTCATTGATCTCCTTACCGCGGACAGTATTCCCTACCACAAGTCTTGCTTCAGATG CAGCCACTGCAAAGGCACACTTTCGATGTGCAGCTATTCGTCCATGGATGGGGTTCTTTA CTGCAAGACCCATTTTGAGCAGCTATTCAAGGAAACAGGCACCTTCAAGAAGAACTTCCC CTCAGGTACAAAGGCAAACAGTGAACAGGCTAAGATTCCCAGCAAGCTGTCCTCTGTGTT CTGTGGAACCCAGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAAGAT GACCATGGAGGGTGAGTGTTACCACAGGACCTGCTTCAAGTGCGCCCATGGCGGCTGCCT TCTGACGAACGCCTCCTACGCCTCGCACAACGGGATCCTCTACTGCCAGAACCACTTCTG GCAGCTGTTCAAGAAGTCCGGCAGCTACGACAACCTGCTGAAGCCCGCCTCCGCCGCCGC CGAGAACACCGTCGAATCCGAGGTCGCCGTCGCGGAGCCCGCGAAGGAAGACCCGGAGAC GGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTCACCGGAGCAGGTCGCGGAAGCTGT TGTAGAGGACCAGGAGCACTCATGAGAAGAACCTGCCACAGTGCCACTTGCACGCGCACA CAGGAATATATATACATGTTCCCATATTACTGCTAATTTTTTTTGGTGTCGTTGAGAAAC TTGTCGCTGGTTCTTCTCATCTTCTCGTCTGGATTCCTGCAATCCTGGAGTCTGTACCTG TGCTAAGATATCATGAATGAGAGCAGATTTTGCAAAGAAAGGGAGAAATATGCTCATTCT GATATTTTGACATGTATCATCCGTCTCAGAAAAATCAACTTCTCACTGCGAACATTGACA TAATCTATGTCCAGGTTCATAGTTAGAAGTTGATTTTTAAGGATGATTTGGCAGCACCAT TTTAAGAAGAAATATTTTATCTGGATCATGTGAGAATTGAGATGATAAT



consensusID : consensus_12914#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 442
fasta sequence
                              [GTTCTGTGGAACCCAGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAAGATGACCATGGAGGGTGAGTGTTACCACAGGACCTGCTTCAAGTGCGCCCATGGCGGCTGCCTTCTGACGAACGCCTCCTACGCCTCGCACAACGGGATCCTCTACTGCCAGAACCACTTCTGGCAGCTGTTCAAGAAGTCCGGCAGCTACGACAACCTGCTGAAGCCCGNCTCCGNCGCCGCCGAGAACACCGTCGAATCCGAGGTCGCCGTCGCGGAGCCCGCGAAGGAAGACCCGGAGACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTNAACGGAGCAGGTCGCGGAAGTTGTTTNTAGAGGACCANGAGCAATTAATTAGGAAGGACCTTCCACAGTGCCATTTTCAAGGGGAAAAAAGGATNTTTTTTAC]

[+] EMBL AU029821             [GTTCTGTGGAACCCAGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAAGATGACCATGGAGGGTGAGTGTTACCACAGGACCTGCTTCAAGTGCGCCCATGGCGGCTGCCTTCTGACGAACGCCTCCTACGCCTCGCACAACGGGATCCTCTACTGCCAGAACCACTTCTGGCAGCTGTTCAAGAAGTCCGGCAGCTACGACAACCTGCTGAAGCCCGNCTCCGNCGCCGCCGAGAACACCGTCGAATCCGAGGTCGCCGTCGCGGAGCCCGCGAAGGAAGACCCGGAGACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTNAACGGAGCAGGTCGCGGAAGTTGTTTNTAGAGGACCANGAGCAATTAATTAGGAAGGACCTTCCACAGTGCCATTTTCAAGGGGAAAAAAGGATNTTTTTTAC]


>consensus_12914#1 GTTCTGTGGAACCCAGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAA GATGACCATGGAGGGTGAGTGTTACCACAGGACCTGCTTCAAGTGCGCCCATGGCGGCTG CCTTCTGACGAACGCCTCCTACGCCTCGCACAACGGGATCCTCTACTGCCAGAACCACTT CTGGCAGCTGTTCAAGAAGTCCGGCAGCTACGACAACCTGCTGAAGCCCGNCTCCGNCGC CGCCGAGAACACCGTCGAATCCGAGGTCGCCGTCGCGGAGCCCGCGAAGGAAGACCCGGA GACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTNAACGGAGCAGGTCGCGGAAGT TGTTTNTAGAGGACCANGAGCAATTAATTAGGAAGGACCTTCCACAGTGCCATTTTCAAG GGGAAAAAAGGATNTTTTTTAC



consensusID : consensus_12914#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 313
fasta sequence
                              [NCCCGGAGACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTCACCGGAGCAGGTCGCGGAAGCTGTTGTAGAGGACCAGGAGCACTCATGAGAAGAACCTGCCACAGTGCCACTTGCACGCGCACACAGGAATATATATACATGTTCCCATATTACTGCTAATTTTTTTTGGTGTCGTTGAGAAACTTGTCGCTGGTTCTTCTCATCTTCTCGTCTGGATTCCTGCAATCCTGGAGTCTGTACCTGTGCTAAGATATCATGAATGAGAGCAGATTTTGCAAAGAAAGGGAGAAAAAAAAAAAAAAAAAA]

[+] EMBL AU165381             [NCCCGGAGACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTCACCGGAGCAGGTCGCGGAAGCTGTTGTAGAGGACCAGGAGCACTCATGAGAAGAACCTGCCACAGTGCCACTTGCACGCGCACACAGGAATATATATACATGTTCCCATATTACTGCTAATTTTTTTTGGTGTCGTTGAGAAACTTGTCGCTGGTTCTTCTCATCTTCTCGTCTGGATTCCTGCAATCCTGGAGTCTGTACCTGTGCTAAGATATCATGAATGAGAGCAGATTTTGCAAAGAAAGGGAGAAAAAAAAAAAAAAAAAA]
[+] EMBL AU172509             [aCCCGGAGACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTCCCCGGAGCAGGTCGCGGAAGCTGTTGTANAGGACCAGGAGCNCTCATGANAAGAACCTGCCNCAGTGCCACTTGCACGNGCACNCAGGAATATATATACATGTTCCCATATTACTGCTAATTTTTTTTGGNGTCGTTGANAAACTTGTCGCTGGTTCTTCTCATCTTCTCGTCTGGATTCCTGCAATCCTGGAGTCTGNACCTGTGCTAAGATATCATGAATGAGAGCAGATTTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_12914#2 NCCCGGAGACGGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTCACCGGAGCAGGTCG CGGAAGCTGTTGTAGAGGACCAGGAGCACTCATGAGAAGAACCTGCCACAGTGCCACTTG CACGCGCACACAGGAATATATATACATGTTCCCATATTACTGCTAATTTTTTTTGGTGTC GTTGAGAAACTTGTCGCTGGTTCTTCTCATCTTCTCGTCTGGATTCCTGCAATCCTGGAG TCTGTACCTGTGCTAAGATATCATGAATGAGAGCAGATTTTGCAAAGAAAGGGAGAAAAA AAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12914#0      AGAATTGCATATTAAAGCCTCCCATCAACTTCTTGCACACACCCTCCCTTTGGCTTTCAT 60
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      CTGCATCTATTCAGTTGCAGATTGAGAGCCAAAGACATTATCTTGATTCTATCAGGAGGG 120
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      TTGTGCTAGCGAATTCTTGTTAGCAACAAATTGACATATTGCTCGGCACATCCCCACCGA 180
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      GAATACCAAGATGACGTTCTCTGGTACACAGGACAAGTGCAATGCTTGTGACAAGACCGT 240
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      GCATTTCATTGATCTCCTTACCGCGGACAGTATTCCCTACCACAAGTCTTGCTTCAGATG 300
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      CAGCCACTGCAAAGGCACACTTTCGATGTGCAGCTATTCGTCCATGGATGGGGTTCTTTA 360
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      CTGCAAGACCCATTTTGAGCAGCTATTCAAGGAAACAGGCACCTTCAAGAAGAACTTCCC 420
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      CTCAGGTACAAAGGCAAACAGTGAACAGGCTAAGATTCCCAGCAAGCTGTCCTCTGTGTT 480
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      CTGTGGAACCCAGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAAGAT 540
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      GACCATGGAGGGTGAGTGTTACCACAGGACCTGCTTCAAGTGCGCCCATGGCGGCTGCCT 600
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      TCTGACGAACGCCTCCTACGCCTCGCACAACGGGATCCTCTACTGCCAGAACCACTTCTG 660
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      GCAGCTGTTCAAGAAGTCCGGCAGCTACGACAACCTGCTGAAGCCCGCCTCCGCCGCCGC 720
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ------------------------------------------------------------
                                                                                   

consensus_12914#0      CGAGAACACCGTCGAATCCGAGGTCGCCGTCGCGGAGCCCGCGAAGGAAGACCCGGAGAC 780
consensus_12914#2      --------------------------------------------------NCCCGGAGAC 10
consensus_12914#1      ----------------------------------------------GTTCTGTGGAACCC 14
                                                                             * *  *

consensus_12914#0      GGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTC-ACCGGAGCAGGTCGCGGAAGCTG 839
consensus_12914#2      GGAGGAGGCAGCCAAGGAAGAAGAAGAAGAAGCGTC-ACCGGAGCAGGTCGCGGAAGCTG 69
consensus_12914#1      AGGACAAGTGTACTGCCTGCAAGAAGACTGTGTATCCATTGGAGAAGATGACCATGGAGG 74
                        *   * *    *       *******    *  ** *  **** ** *  *    *  *

consensus_12914#0      TTGTAGAGGACCAGGAGCACT-CATGAGAAGAACCTGCCACAG-TGCCACTTG-CACGCG 896
consensus_12914#2      TTGTAGAGGACCAGGAGCACT-CATGAGAAGAACCTGCCACAG-TGCCACTTG-CACGCG 126
consensus_12914#1      GTGAGTGTTACCACAGGACCTGCTTCAAGTGCGCCCATGGCGGCTGCCTTCTGACGAACG 134
                        **      ****   *  ** * * *   *  **     * * ****   ** *   **

consensus_12914#0      CACACAGGAATATATATA-CATGTTCCCATATTACTGCTAATTTTTTTTGGTGTCGTTGA 955
consensus_12914#2      CACACAGGAATATATATA-CATGTTCCCATATTACTGCTAATTTTTTTTGGTGTCGTTGA 185
consensus_12914#1      CCTCCTACGCCTCGCACAACGGGATCCTCTACTGCCAGAACCACTTCTGGCAGCTGTTCA 194
                       *   *          * * *  * ***  ** * *    *    ** * *  *  *** *

consensus_12914#0      GAAACTTGTCGCTGGTTCTTCTCATCTTCTCGT-CTGGATTCCTGCAATCCTGGAGTCTG 1014
consensus_12914#2      GAAACTTGTCGCTGGTTCTTCTCATCTTCTCGT-CTGGATTCCTGCAATCCTGGAGTCTG 244
consensus_12914#1      AGAAGTC--CGGCAGCTACGACAACCTGCTGAAGCCCGNCTCCGNCGCCGCCGAGAACAC 252
                         ** *   **   * *      * ** **    *  *  ***  *    * *    *  

consensus_12914#0      TACCTGTGCTAAGAT----ATCATGAA-----TGAGAGCAGATTTTGCAAAGAAAGGGAG 1065
consensus_12914#2      TACCTGTGCTAAGAT----ATCATGAA-----TGAGAGCAGATTTTGCAAAGAAAGGGAG 295
consensus_12914#1      CGTCGAATCCGAGGTCGCCGTCGCGGAGCCCGCGAAGGAAGACCCGGAGACGGAGGAGGC 312
                          *    *  ** *     **  * *      **  * ***    *  * * * * *  

consensus_12914#0      AAATATGCTCATTCTGATATTTTGACATGTATCATCCGTCTCAGAAAAATCAACTTCTCA 1125
consensus_12914#2      AAAAAAAAAAAAAAAAAA------------------------------------------ 313
consensus_12914#1      AGCCAAGGAAGAAGAAGAAGAAGCGTNAACGGAGCAGGTCGCGGAAGTTGTTTNTAGAGG 372
                       *   *                                                       

consensus_12914#0      CTGCGAACATTGACATAATCTATGTCCAGGTTCATAGTTAGAAGTTGATTTTTAAGGATG 1185
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      ACCANGAGCAATTAATTAGGAAGGACCTTCCACAGTGCCATTTTCAAGGGGAAAAAAGGA 432
                                                                                   

consensus_12914#0      ATTTGGCAGCACCATTTTAAGAAGAAATATTTTATCTGGATCATGTGAGAATTGAGATGA 1245
consensus_12914#2      ------------------------------------------------------------
consensus_12914#1      TNTTTTTTAC-------------------------------------------------- 442
                                                                                   

consensus_12914#0      TAAT 1249
consensus_12914#2      ----
consensus_12914#1      ----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)