|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12993#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1235 fasta sequence
[TCCTCGTCTTCGGCCTGCGGGGGCAAGAAGCGGCCCGACATACTCAACATGATCCGGAGTGCAACATGCCTTAATTCGTCATCTACCGATACCGGCAAGGGGAGGAGTAAGCAGTCAAGCAACAAAGTGACTCATGGATTCCACTTGGTGGAAGGGAAATCTGGGCATGACATGGAGGACTACCATGTGGCAGAGTACAAGTATGACAAGAGCCATGAGCTTGGTCTCTTTGCCATTTTTGATGGTCACTTGGGAGACAGTGTTCCAAGTTACTTGAAAGCTAACCTTTTCTGCAACATACTGAAAGAGCCTATCTTCTGGACTAACCCTCAGGAAGCAATTAAGAATGCATACCGCTCTACAAACAAATATATTTTGGAGAATGCCAAACAACTTGGACCTGGTGGTTCAACAGCAGTTACTGCTATTGTCGTTGATGGAAAGGATATGTGGGTAGCAAATGTAGGTGATTCAAGAGCTGTTGTGTGTGAAAGAGGTGCTGCTAATCAGCTCACTGTTGACCATGAACCTCATACAACTAATGAAAGGCAGAGGATTGAGAAGCAGGGTGGCTTTGTAACAACATTTCCTGGTGATGTTCCCCGGGTAAATGGTCAGCTTGCTGTTGCGAGGGCCTTTGGGGACCAAAGCCTCAAGGCGCACTTGAGTTCAGAACCTGATGTTAGGCATGTACCAATAAATTCAAGCATAGAGTTCGTCATACTTGCCAGCGATGGACTATGGAAGGTAATGAAGAACCAGGAAGCCGTCGATCTTGTGAAGTCGATCAAGGACCCCCAGGCAGCAGCGAAGCGACTGACGACCGAAGCGCTTGCGAGGAAGAGCAAGGACGACATCTCCTGCATCGTCATCCGATTCCGCTGCTGAACACCCGCTTCGCAACATTGTCTCTGCGTTTCTCTTCGTTCCGATTGAATTTGTGTGGTGGTGCTGAAAAAAGATGGTTTACCTATAGTATGTAGCTGTTGTGAACAGACCCTAGAGATGAGATATGTTAGCAAGGACAAAACTGGAGATGTTCAAACTTGTGGGTTCAGTAGCGAGTAGTGAGTGTGTGCAGGGTGGTGGTGGGCGGTGGTGATTCGTCTGTGCATACATACACCAGCATAAACTGTTTTATCAATCGAACGGGGCGTGCAGGTTGTTGCCGTTGTGTAAAAAAAAAAAAACTTGGTTTTGGCTGTGAGTTGTGAAATGGTAGTAGTCCCAGTCAT]
[+] EMBL AK070129 [TCCTCGTCTTCGGCCTGCGGGGGCAAGAAGCGGCCCGACATACTCAACATGATCCGGAGTGCAACATGCCTTGATTCGTCATCTACCGATACCGGCAAGGGGAGGAGTAAGCAGTCAAGCAACAAAGTGACTCATGGATTCCACTTGGTGGAAGGGAAATCTGGGCATGACATGGAGGACTACCATGTGGCAGAGTACAAGTATGACAAGAGCCATGAGCTTGGTCTCTTTGCCATTTTTGATGGTCACTTGGGAGACAGTGTTCCAAGTTACTTGAAAGCTAACCTTTTCTGCAACATACTGAAAGAGCCTATCTTCTGGACTAACCCTCAGGAAGCAATTAAGAATGCATACCGCTCTACAAACAAATATATTTTGGAGAATGCCAAACAACTTGGACCTGGTGGTTCAACAGCAGTTACTGCTATTGTCGTTGATGGAAAGGATATGTGGGTAGCAAATGTAGGTGATTCAAGAGCTGTTGTGTGTGAAAGAGGTGCTGCTAATCAGCTCACTGTTGACCATGAACCTCATACAACTAATGAAAGGCAGAGGATTGAGAAGCAGGGTGGCTTTGTAACAACATTTCCTGGTGATGTTCCCCGGGTAAATGGTCAGCTTGCTGTTGCGAGGGCCTTTGGGGACCAAAGCCTCAAGGCGCACTTGAGTTCAGAACCTGATGTTAGGCATGTACCAATAAGTTCAAGCATAGAGTTCGTCATACTTGCCAGCGATGGACTATGGAAGGTAATGAAGAACCAGGAAGCCGTCGATCTTGTGAAGTCGATCAAGGACCCCCAGGCAGCAGCGAAGCGACTGACGACCGAAGCGCTTGCGAGGAAGAGCAAGGACGACATCTCCTGCATCGTCATCCGATTCCGCTGCTGAACACCCGCTTCGCAACATTGTCTCTGCGTTTCTCTTCGTTCCGATTGAATTTGTGTGGTGGTGCTGAAAAAAGATGGTTTACCTATAGTATGTAGCTGTTGTGAACAGACCCTAGAGATGAGATATGTTAGCAAGGACAAAACTGGAGATGTTCAAACTTGTGGGTTCAGTAGCGAGTAGTGAGTGTGTGCAGGGTGGTGGTGGGCGGTGGTGATTCGTCTGTGCATACATACACCAGCATAAACTGTTTTATCAATCGAACGGGGCGTGCAGGTTGTTGCCGTTGTGTACATACATTGTTGCTTGGTTTTGGCTGTGAGTTGTGAAATGGTAGTAGTCCCAGTCAT]
[+] EMBL CB654813 [TCCTCGTCTTCGGCCTGCGGGGGCAAGAAGCGGCCCGACATACTCAACATGATCCGGAGTGCAACATGCCTTAATTCGTCATCTACCGATACCGGCAAGGGGAGGAGTAAGCAGTCAAGCAACAAAGTGACTCATGGATTCCACTTGGTGGAAGGGAAATCTGGGCATGACATGGAGGACTACCATGTGGCAGAGTACAAGTATGACAAGAGCCATGAGCTTGGTCTCTTTGCCATTTTTGATGGTCACTTGGGAGACAGTGTTCCAAGTTACTTGAAAGCTAACCTTTTCTGCAACATACTGAAAGAGCCTATCTTCTGGACTAACCCTCAGGAAGCAATTAAGAATGCATACCGCTCTACAAACAAATATATTTTGGAGAATGCCAAACAACTTGGACCTGGTGGTTCAACAGCAGTTACTGCTAT ]
[+] EMBL CF322897 [TCCTCGTCTTCGGCCTGCGGGGGCAAGAAGCGGCCCGACATACTCAACATGATCCGGAGTGCAACATGCCTTAATTCGTCATCTACCGATACCGGCAAGGGGAGGAGTAAGCAGTCAAGCAACAAAGTGACTCATGGATTCCACTTGGTGGAAGGGAAATCTGGGCATGACATGGAGGACTACCATGTGGCAGAGTACAAGTATGACAAGAGCCATGA ]
[+] EMBL CF278442 [TCCTCGTCTTCGGCCTGCGGGGGCAAGAAGCGGCCCGACATACTCAACATGATCCGGAGTGCAACATGCCTTAATTCGTCATCTACCGATACCGGCAAGGGGAGGAGTAAGCAGTCCAGCAACAAAGTGACTCATGGATTCCACTTGGTGGAAGG ]
[+] EMBL CF308432 [ gagtagaaaAGCTTGGTCTCTTTGCCATTTTTGATGGTCACTTGGGAGACAGTGTTCCAAGTTACTTGAAAGCTAACCTTTTCTGCAACATACTGAAAGAGCCTATCTTCTGGACTAACCCTCAGGAAGCAATTAAGAATGCATACCGCTCTACAAACAAATATATTTTGGAGAATGCCAAACAACTTGGACCTGGTGGTTCAACAGCAGTTACTGCTATTGTCGTTGATGGAAAGGATATGTGGGTAGCAAATGTAGGTGATTCAAGAGCTGTTGTGTGTGAAAGAGGTGCTGCTAATCAGCTCACTGTTGACCATGAACCTCATACAACTAATGAAAGGCAGAGGATTGAGAAGCAGGGTGGCTTTGTAACAACATTTCCTGGTGATGTTCCCCGGGTAAATGGTCAGCTTGCTGTTGCGAGGGCCTTTGGGGACCAAAGCCTCAAGGCGCACTTGAGTTCAGAACCTGATGTTAGGCATGTACCAATAAATTCAAGCATAGAGTTCGTCATACTTGCCAGCGATAGACTATGGAAGGTAATGAAGAACCAGGAAGCCGTCGATCTTGTGAAGTCGATCAAGGACCCCCAGGCAGCAGCGAAGCGACTGACGACCGAAGCGCTTGCGAGGAAGAGCAAGGACGACATCTCCTGCATCGTCATCCGATTCCGCTGCTGAACACCCGCTTCGCAACATTGTCTCTGCGTTT ]
[-] EMBL CB653686 [ GGTAGCAAATGTAGGTGATTCAAGAGCTGTTGTGTGTGAAAGAGGTGCTGCTAATCAGCTCACTGTTGACCATGAACCTCATACAACTAATGAAAGGCAGAGGATTGAGAAGCAGGGTGGCTTTGTAACAACATTTCCTGGTGATGTTCCCCGGGTAAATGGTCAGCTTGCTGTTGCGAGGGCCTTTGGGGACCAAAGCCTCAAGGCGCACTTGAGTTCAGAACCTGATGTTAGGCATGTACCAATAAATTCAAGCATAGAGTTCGTCATACTTGCCAGCGATGGACTATGGAAGGTAATGAAGAACCAGGAAGCCGTCGATCTTGTGAAGTCGATCAAGGACCCCCAGGCAGCAGCGAAGCGACTGACGACCGAAGCGCTTGCGAGGAAGAGCAAGGACGACATCTCCTGCATCGTCATCCGATTCCGCTGCTGAACACCCGCTTCGCAACATTGTCTCTGCGTTTCTCTTCGTTCCGATTGAATTTGTGTGGTGGTGCTGAAAAAAGATGGTTTACCTATAGTATGTAGCTGTTGTGAACAGACCCTAGAGATGAGATATGTTAGCAAGGACAAAACTGGAGATGTTCAAACTTGTGGGTTCAGTAGCGAGTAGTGAGTGTGTGCAGGGTGGTGGTGGGCGGTGGTGATTCGTCTGTGCATACATACACCAGCATAAACTGTTTTATCAATCGAACGGGGCGTGCAGGTTGTTGCCGTTGTGTAAAAAAAAga ]
[-] EMBL CB654814 [ AGGTGATTCAAGAGCTGTTGTGTGTGAAAGAGGTGCTGCTAATCAGCTCACTGTTGACCATGAACCTCATACAACTAATGAAAGGCAGAGGATTGAGAAGCAGGGTGGCTTTGTAACAACATTTCCTGGTGATGTTCCCCGGGTAAATGGTCAGCTTGCTGTTGCGAGGGCCTTTGGGGACCAAAGCCTCAAGGCGCACTTGAGTTCAGAACCTGATGTTAGGCATGTACCAATAAATTCAAGCATAGAGTTCGTCATACTTGCCAGCGATGGACTATGGAAGGTAATGAAGAACCAGGAAGCCGTCGATCTTGTGAAGTCGATCAAGGACCCCCAGGCAGCAGCGAAGCGACTGACGACCGAAGCGCTTGCGAGGAAGAGCAAGGACGACATATCCTGCATCGTCATCCGATTCCGCTGCTGAACACCCGCTTCGCAACATTGTCTCTGCGTTTCTCTTCGTTCCGATTGAATTTGTGTGGTGGTGCTGAAAAAAGATGGTTTACCTATAGTATGTAGCTGTTGTGAACAGACCCTAGAGATGAGATATGTTAGCAAGGACAAAACTGGAGATGTTCAAACTTGTGGGTTCAGTAGCGAGTAGTGAGTGTGTGCAGGGTGGTGGTGGGCGGTGGTGATTCGTCTGTGCATACATACACCAGCATAAACTGTTTTATCAATTGAAGGGGGCGTGCAGGTT ]
[+] EMBL CA763677 [ GTGCTGCTAATCAGCTCACTGTTGACCATGAACCTCATACAACTAATGAAAGGCAGAGGATTGAGAAGCAGGGTGGCTTTGTAACAACATTTCCTGGTGATGTTCCCCGGGTAAATGGTCAGCTTGCTGTTGCGAGGGCCTTTGGGGACCAAAGCCTCAAGGCGCACTTGAGTTCAGAACCTGATGTTAGGCATGTACCAATAAATTCAAGCATAGAGTTCGTCATACTTGCCAGCGATGGACTATGGAAGGTAATGAAGAACCAGGAAGCCGTCGATCTTGTGAAGTCGATCAAGGACCCCCAGGCAGCAGCGAAGCGACTGACGACCGAAGCGCTTGCGAGGAAGAGCAAGGACGACATCTCCTGCATCGTCATCCGATTCCGCTGCTGAACACCCGCTTCGCAACATTGTCTCTGCGTTTCTCTTCGTTCCGATTGAATTTGTGTGGTGGTGCTGAAAAAAGATGGTTTACCTATAGTATGTAGCTGTTGTGAACAGACCCTAGAGATGAGATATGTTAGCAAGGACAAAACTGGAGATGTTCAAACTTGTGGGTTCAGTAGCGAGTAGTGAGTGTGTGCAGGGTGGTGGTGGGCGGTGGTGATTCGTCTGTGCATACATACACCAGCATAAACTGTTTTATCAATCGAACGGGGCGTGCAGGTTGTTGCCGTCGTGTAAAAAAAAAAAAA ]
[-] EMBL CB653685 [ AGAGGATTGAGAAGCAGGGTGGCTTTGTAACAACATTTCCTGGTGATGTTCCCCGGGTAAATGGTCAGCTTGCTGTTGCGAGGGCCTTTGGGGACCAAAGCCTCAAGGCGCACTTGAGTTCAGAACCTGATGTTAGGCATGTACCAATAAATTCAAGCATAGAGTTCGTCATACTTGCCAGCGATGGACTATGGAAGGTAATGAAGAACCAGGAAGCCGTCGATCTTGTGAAGTCGATCAAGGACCCCCAGGCAGCAGCGAAGCGACTGACGACCGAAGCGCTTGCGAGGAAGAGCAAGGACGACATCTCCTGCATCGTCATCCGATTCCGCTGCTGAACACCCGCTTCGCAACATTGTCTCTGCGTTTCTCTTCGTTCCGATTGAATTTGTGTGGTGGTGCTGAAAAAAGATGGTTTACCTATAGTATGTAGCTGTTGTGAACAGACCCTAGAGATGAGATATGTTAGCAAGGACAAAACTGGAGATGTTCAAACTTGTGGGTTCAGTAGCGAGTAGTGAGTGTGTGCAGGGTGGTGGTGGGCGGTGGTGATTCGTCTGTGCATACATACACCAGCATAAACTGTTTTATaag ]
[+] EMBL AU070786 [ TGCGAGGGCCTTTGGGGACCAAAGCCTCAAGGCGCACTTGAGTTCAGAACCTGATGTTAGGCATGTACCAATAAATTCAAGCATAGAGTTCGTCATACTTGCCAGCGATGGACTATGGAAGGTAATGAAGAACCAGGAAGCCGTCGATCTTGTGAAGTCGATCAAGGACCCCCAGGCAGCAGCGAA CANCTGACGACCGAAGCGCTTGCGAGGAAGAGCAAGGACGACATCTCCTGCATCGTCATCCGATTCCGCTGCTGAACACCCGCTTCGCAACATTGTCTCTGCGTTTCTCTTCGTTCCGATTGAATTTGTGTGGTGGTGCTGAAAAAAGATGGTTTACCTATAGTATGTAGCTGTTGTGAACAGACCCTAGAGATGAGATATGTTAGCAAGGACAAAACTGGAGATGTTCAAACTTGTGGGTTCAGTAGCGAGTAGTGAGTGTGTGCAGGGTGGTGGTGGGCGGTGGTGATTCGTCTGTGCATACATACACCAGCATAAACTGTTTTATCAATCGAACGGGGCGTGCAGGTTGTTGCCGTTGTGTAAAAAAAAAANAAnaa ]
[-] EMBL CF277081 [ GAGTTCAGAACCTGATGTTAGGCATGTACCAATAAATTCAAGCATAGAGTTCGTCATACTTGCCAGCGATGGACTATGGAAGGTAATGAAGAACCAGGAAGCCGTCGATCTTGTGAAGTCGATCAAGGACCCCCAGGCAGCAGCGAAGCGACTGACGACCGAAGCGCTTGCGAGGAAGAGCAAGGACGACATCTCCTGCATCGTCATCCGATTCCGCTGCTGAACACCCGCTTCGCAACATTGTCTCTGCGTTTCTCTTCGTTCCGATTGAATTTGTGTGGTGGTGCTGAAAAAAGATGGTTTACCTATAGTATGTAGCTGTTGTGAACAGACCCTAGAGATGAGATATGTTAGCAAGGACAAAACTGGAGATGTTCAAACTTGTGGGTTCAGTAGCGAGTAGTGAGTGTGTGCAGGGTGGTGGTGGGCGGTGGTGATTCGTCTGTGCATACATACACCAGCATAAACTGTTTTATCAATCGAACGGGGCGTGCAGGTTGTTGCCGTTGTGTCCAAAAAAA ]
[-] EMBL CF278443 [ CAAGGACCCCCAGGCAGCAGCGAAGCGACTGACGACCGAAGCGCTTGCGAGGAAGAGCAAGGACGACATCTCCTGCATCGTCATCCGATTCCGCTGCTGAACACCCGCTTCGCAACATTGTCTCTGCGTTTCTCTTCGTTCCGATTGAATTTGTGTGGTGGTGCTGAAAAAAGATGGTTTACCTATAGTATGTAGCTGTTGTGAACAGACCCTAGAGATGAGATATGTTAGCAAGGACAAAACTGGAGATGTTCAAACTTGTGGGTTCAGTAGCGAGCAGTGAGTGTGTGCAGGGTGGTGGTGGGCGGTGGTGATTCGTCTGTGCATACATACACCAGCATAAACTGTTTTATCAATCGAACGGGGCGTGCAGGTAGTTGCCGTTGTGTAAAAAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||