These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13032#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 786 fasta sequence [TTTTTGACTAAAAACAAAAGTGAAATTATTGCGGGACCCCAACTGACAGAACATGTGAGTAATCAAGGATAAATGAAAAACGCGCAAACCAACGCCACATGGCTAAAAACTTCCGCTATAAATCAGTGGTGCCTTGCACTTGCACACTCCATCTCCAACTCTCCAAGCCAGCCCAGCAGCACTCTCCTTCTCCAGGCTCCAGCAAACACACAAACCACGGAACCACCACCACCACCAGCAGCAGCAACAGCAGCAGCTCAGAGGAGAGGAGAAGAGCAAGTTAAAACAACTTACAAGCAATGGAGTACAGCTATCCCTGCAACAGCTGCAGCTGCAACAA-GGAGAAGAGGCCTCCGCTGAAGAGGGGGCAGCTCAAGCTGCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGATCACAGCTTCAG-GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACAC-TTGAGCAGCAGCGCCTGCAAAC-TGA-TGGAAGTTCTGGTGTACTACGGTGGTGGGCATAGGAA-TTGTGCATAGTT--GTTGGTGTGTAGTTTTCCCCCCTTTCCGCCCCGTAGCGTATGGCTTGAGACTTCGAGAGTATCTCGCTTCCTCGGCAATTGCTTTGTTCTTGAGTGAAGAAATAGTTAGGGAGAGACTCGGAGGTGTGTTCCTGGCAGTCTCATGTCTGGTTTGGTAATGTACTGATGTGCAGCATAATTTTGATGGTAATGAGAGTGTTATTAGTACTTCAAAAA] [+] EMBL CF329782 [TTTTTGACTAAAAACAAAAGTGAAATTATTGCGGGACCCCAACTGACAGAACATGTGAGTAATCAAGGATAAATGAAAAACGCGCAAACCAACGCCACATGGCTAAAAACTTCCGCTATAAATCAGTGGTGCCTTGCACTTGCACACTCCATCTCCAACTCTCCAAGCCAGCCCAGCAGCACTCTCCTTCTCCAGGCTCCAGCAAACACACAAACCACGGAACCACCACCACCACCAGCAGCAGCAACAGCAGCAGCTCAGAGGAGAGGAGAAGAGCAAGTTAAAACAACTTACAAGCAATGGAGTACAGCTATCCCTGCAACAGCTGCAGCTGCAACAA GGAGAAGAGGCCTCCGCTGAAGAGGGGGCAGCTCAAGCTGCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGATCACAGCTTCAG GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACAC TTGAGCAGCAGCGCCTGCAAAC TGA TGGAAGTTC ] [+] EMBL AU057116 [ AGCAGCACTCTCCTTCTCCAGGCTCCAGCAAACACACAAACCACGGAACCACCACCACCACCAGCAGCAGCAACAGCAGCAGCTCAGAGGAGAGGAGAAGAGCAAGTTAAAACAACTTACAAGCAATGGAGTACAGCTATCCCTGCAACAGCTGCAGCTGCAACAA GGAGAAGAGGCCTCCGCTGAAGAGGGGGCAGCTCAAGCTGCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGATCACAGCTTCAG GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACAC TTGAGCAGCAGCGCCTGCAAAC TGA TGGAAGTTCTGGTGTACTACGGTGGTGGGCATAGGAA TTGTGCATAGTT GTTGGTGTGTAGTTTTCCCCCCTTTCCGCCCCGTAGCGTATGGCTTGAGACTTCGAGAGTATCTCGCTTCCTCGGCAATTGCTTTGTTCTTGAGTGAAGAAATAGTTAGGGAGAGACTCGGAGGTGTGTTCCTGGCAGTCTCATGTCTGGTTTGGTAATGTACTGATGTGCAGCATAATTTTGATGGTAATGAGAGTGTTATTAGTACTTCA ] [+] EMBL AU058185 [ GCAGCACTCTCCTTCTCCAGGCTCCAGCAAACACACAAACCACGGAACCACCACCACCACCAGCAGCAGCAACAGCAGCAGCTCAGAGGAGAGGAGAAGAGCAAGTTAAAACAACTTACAAGCAATGGAGTACAGCTATCCCTGCAACAGCTGCAGCTGCAACAA GGAGAAGAGGCCTCCGCTGAAGAGGGGGCAGCTCAAGCTNCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGATCACAGCTTCAG GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACAC TTGAGCAGCAGCGCCTGCAAACTTGA TGGAAGTTCTGGTGTA ] [+] EMBL C74773 [ nCCTTCTCCAGGCNCCAGCAAACACACAAACCACGGAACCACCACCACCACCAGCAGCAGCAACAGCAGCAGCTCAGAGGAGAGGAGAAGAGCAAGTTAAAACAACTTACAAGCAATGGAGTACAGCTATCCCTGCAACAGCTGCAGCTGCAACAA GGAGAAGAGGCCTCCGCTGAAGAGGGGGCAGCTCAAGCTGCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGATCACAGCTTCAG GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACAC TTGAGCAGCAGCGCCTGCAAAC TGA TGG ANTTCTGGTGT CTACGGTGGTGGGCATAGG A TTGTGCATANTT GTTGG ] [+] EMBL C73251 [ CGGAACCACCACCACCACCAGCAGCAGCAACAGCAGCAGCTCAGAGGAGAGGAGAAGAGCAAGTTAAAACAACTTACAAGCAATGGAGTACAGCTATCCCTGCAACAGCTGCAGCTGCAACAA GGAGAAGAGGCCTCCGCTGAAGAGGGGGCAGCTCAAGCTGCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGNTCACAGCTTCAG GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACACTTTGAGCAGCAGCGNCTGCAAAC TGATTGGAAGTTCTGGTGTACTACGGTGGTGGGCATAGGAATTTTTGCATAGTTTNTTTGGTGTGTAGTTTTNCCCCCTTTCCGCCCCGTAGCGTATTGGTTt ] [+] EMBL AU094172 [ GGAACCACCACCACCACCAGCAGCAGCANCAGCAGCAGCTCAGAGGAGAGGAGAAGAGCAAGTTAAAACAACTTACAAGCAATGGAGTACAGCTATCCCTGCAACAGCTGCAGCTGCAACAA GGAGAAGAGGCCTCCGCTGAAGAGGGGGCAGCTCAAGCTGCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGATCACAGCTTCAG GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACAC TTGAGCAGCAGCGCCTGCAAAC TGA TGGAAGTTCTGGTGTACTACGGTGGTGGGCATAGGAA TTGTGCATAGTT GTTGGTGTGTAGTTTTCCCCCCTTTCCGCCCCGTAGCGTATGGCTTGAGACTTCGAGAGTATCTCGCTTCCTCGGCAATTGCTTTGTTCTTGAGTGAAGAAATAGTTAGGGAGAGACTCGGAGGTGTGTTCCTGGCAGTCTCATGTCTGGTTTGGTAATGTACTGATGTGCAGCATAATTTTGATGGTAATGAGAGTGTTATTAGTAaaaaa ] [-] EMBL CB965167 [ GGAACCACCACCACCACCAGCAACAGCAACAGCAGCAGCTCAGAGGAGAGGAGAAGAGCAAGTTAAAACAACTTACAAGCAATGGAGTACAGCTATCCCTGCAACAGCTGCAGCTGCAACAA GGAGAAGAGGCCTCCGCTGAAGAGGGGGCAGCTCAAGCTGCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGATCACAGCTTCAG GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACAC TTGAGCAGCAGCGCCTGCAAAC TGA TGGAAGTTCTGGTGTACTACGGTGGTGGGCATAGGAA TTGTGCATAGTT GTTGGTGTGTAGTTTTCCCCCCTTTCCGCCCCGTAGCGTATGGCTTGAGACTTCGAGAGTATCTCGCTTCCTCGGCAATTGCTTTGTTCTTGAGTGAAGAAATAGTTAGGGAGAGACTCGGAGGTGTGTTCCTGGCAGTCTCATGTCTGGTTTGGTAATGTACTGATGTGCAGCATAATTTTGATGGTAATGAGAGTGTTATTA ] [-] EMBL CF329783 [ CAGCAGCAACAGCAGCAGCTCAGAGGAGAGGAGAAGAGCAAGTTAAAACAACTTACAAGCAATGGAGTACAGCTATCCCTGCAACAGCTGCAGCTGCAACAA GGAGAAGAGGCCTCCGCTGAAGAGGGGGCAGCTCAAGCTGCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGATCACAGCTTCAG GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAAATGGGAGCCACAGCTCAACAC TTGAGCAGCAGCGCCTGCAAAC TGA TGGAAGTTCTGGTGTACTACGGTGGTGGGCATAGGAA TTGTGCATAGTT GTTGGTGTGTAGTTTTCCCCCCTTTCCGCCCCGTAGCGTATGGCTTGAGACTTCGAG ] [+] EMBL AU078235 [ CAACAAGGGAGAAGAGCCCTCCGCTGAAGAGGGGNCAGCTCAAGCTGCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGATCACAGCTTCAG GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACAC TTGAGCAGCAGCGCCTGCAAAC TGA TGGAAGTTCTGGTGTACTACGGTGGTGGGCATAGGAA TTGTGCATAGTT GTTGGTGTGTAGTTTTCCCCCCTTTCCGCCCCGTAGCGTATGGCTTGAGACTTCGAGAGTATCTCGCTTCCTCGGCAATTGCTTTGTTCTTGAGTGAAGAAATAGTTAGGGAGAGACTCGGAGGTGTGTTCCTGGCAGTCTCATGTCTGGTTTGGTAATGTACTGATGTGCAGCATAATTTTGATGGTAATGAGAGTGTTATTAGTACTTCAAAAA] [+] EMBL AK063898 [ CTGCAGATCGCCAAGGCCCTGGGCAGCCTCGTGGTGCCCGGAAAGAACAGGGATCACAGCTTCAG GAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACAC TTGAGCAGCAGCGCCTGCAAAC TGA TGGAAGTTCTGGTGTACTACGGTGGTGGGCATAGGAA TTGTGCATAGTT GTTGGTGTGTAGTTTTCCCCCCTTTCCGCCCCGTAGCGTATGGCTTGAGACTTCGAGAGTATCTCGCTTCCTCGGCAATTGCTTTGTTCTTGAGTGAAGAAATAGTTAGGGAGAGACTCGGAGGTGTGTTCCTGGCAGTCTCATGTCTGGTTTGGTAATGTACTGATGTGCAGCATAATTTTGATGGTAATGAGAGTGTT ] [+] EMBL AU076196 [ TCACAGCTTCAGAGAGATGAGCGTCGTGGTGCCCCGGAGGCAAGAACTGGGAGCCACAGCTCAACAC TTGAGCAGCAGCGCCTGCAAAC TGA TGGAAGTTCTGGTGTACTACGGTGGTGGGCATAGGAA TTGTGCATAGTT GTTGGTGTGTAGTTTTCCCCCCTTTCCGCCCCGTAGCGTATGGCTTGAGACTTCGAGAGTATCTCGCTTCCTCGGCAATTGCTTTGTTCTTGAGTGAAGAAATAGTTAGGGAGAGACTCGGAGGTGTGTTCCTGGCAGTCTCATGTCTGGTTTGGTAATGTACTGATGTGCAGCATAATTTTGATGGTAATGAGAGTGTTATTAGTACTT ] [+] EMBL AU031132 [ GTGNTGGGCATAGGAA TTGTGCATAGTT GTTGGTGTGTNGTTTTCCCCCNTTTCCGCCCCGTNGCGTATGGCTTGAGACTTCGAGNGTATCTCGCTTCCTCGGCAATTGCTTTGTTCTTGAGTGAAGAAATAGTTAGGGAGAGACTCGGNGGTGTGTTCCTGGCAGTCTCATGTCTGGTTTGGTAATGTACTGATGTGCAGCATAATTTTGATGGTAATGAGNGTGTTATTNGTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||