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Oryza sativa
cluster # 13123 cluster # 13123       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13123#0 length = 1543 sequences # 11  
consensus_13123#1 length = 610 sequences # 1  

consensusID : consensus_13123#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1543
fasta sequence
                              [CTGTGGATTACCTTACTTGGACCTTCATGTACAGGCGGCTGACCAAGAACCCTAACTACTACAATCTGCAGGGCGTGAGCCACAGGCATTTGTCGGACCATTTATCTGAGTTGGTTGAGACTGTATTGAATGACCTAGAATCAAGCAAGTGTGTGGCTATAGAGGAGGATATGTACCTGAAGCCCCTCAACCTTGGTCTGATTGCTTCGTACTACTACATTAGCTACACAACTATTGAGAGGTTCAGTTCAATGCTAACTCAAAAGACTAAGATGAAAGGGCTCCTGGAGATTCTAGCCTCTGCTTCAGAATATGCTGAGCTTCCCAGTCGCCCTGGTGAGGAGGATTTCATTGAGAAGCTTGTTCGCCACCAGAGATTTTCCATCGAGAAGCCCAAGTATGGTGATCCACATGTCAAGGCTAACGCACTGCTGCAAGCTCATTTTTCAAGGCACACTATCTTAGGGAACCTGGCAGCCGACCAGCGGGAGATACTCCTTTCTGCTCATAGATTGCTCCAGGCAATGGTTGATGTTATCTCCAGCAATGGATGGCTTACGCTTGCTCTTAATGCAATGGAGCTGAGTCAAATGGTGACACAAGGCATGTGGGATCGTGATTCTGTTCTTTTACAACTTCCACATTTCACCAAGGAGTTGGCACGGAGATGTCAGGAGAATGAAGGGAGGCCCATTGAGAGCATCTTTGATCTGGCTGAGATGAGCATCGATGAGATGCGG-GATCTGTTGCAGCAATCAAACCCTCAGCTGCAGGATATCATTGAATTCTTCAAGCGTTTCCCCAATGTCGATATGGCTTACGAAGTTCGCGAGGGT-GATGATATCAGGGCTGGTGACAATGTAACTGTACAGGTGACCCTGGAGCGTGACATGACGAACTTGCCTTCTGAGGTGGGGCCAGTTCATGCCCCCAGGTACCCA-AAGCCCAAGGAAGAAGGCTGGTGGCTGGTAATTGGTGATAGCTCTAC-CA-ATC-AGTTGCTTGCAATCAAGAGGGTTGCACTTCAGAAGAGGGCTCGAGTGAAGCTTGAGTTCACCGCTGCTTCAGAAGCTGGGAGAAAGGAGTACATGATCTACCTGATGTCCGATTCTTATCTGGGCTGCGATCAGGAGTACGAGTTCACCGTCGATGTCATGGATGCTGGAGGGGATTGATCCCAAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGAGCTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTGTTTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGCTACCTGTGGTCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCTTCTTGTGATCAAAATACTTATTGTGTTTTTGTCTTCCTGTTTCATCAAAGCAAGTCACTAACGTTTTGATTCTTATCTATATCATTTTATCATGCCGTTGGTTTGGCCCGTATTAAAAAAAAAAAAAAAAAACACTGTCATGCCCGT]

[+] EMBL AK059539             [CTGTGGATTACCTTACTTGGACCTTCATGTACAGGCGGCTGACCAAGAACCCTAACTACTACAATCTGCAGGGCGTGAGCCACAGGCATTTGTCGGACCATTTATCTGAGTTGGTTGAGACTGTATTGAATGACCTAGAATCAAGCAAGTGTGTGGCTATAGAGGAGGATATGTACCTGAAGCCCCTCAACCTTGGTCTGATTGCTTCGTACTACTACATTAGCTACACAACTATTGAGAGGTTCAGTTCAATGCTAACTCAAAAGACTAAGATGAAAGGGCTCCTGGAGATTCTAGCCTCTGCTTCAGAATATGCTGAGCTTCCCAGTCGCCCTGGTGAGGAGGATTTCATTGAGAAGCTTGTTCGCCACCAGAGATTTTCCATCGAGAAGCCCAAGTATGGTGATCCACATGTCAAGGCTAACGCACTGCTGCAAGCTCATTTTTCAAGGCACACTATCTTAGGGAACCTGGCAGCCGACCAGCGGGAGATACTCCTTTCTGCTCATAGATTGCTCCAGGCAATGGTTGATGTTATCTCCAGCAATGGATGGCTTACGCTTGCTCTTAATGCAATGGAGCTGAGTCAAATGGTGACACAAGGCATGTGGGATCGTGATTCTGTTCTTTTACAACTTCCACATTTCACCAAGGAGTTGGCACGGAGATGTCAGGAGAATGAAGGGAGGCCCATTGAGAGCATCTTTGATCTGGCTGAGATGAGCATCGATGAGATGCGG GATCTGTTGCAGCAATCAAACCCTCAGCTGCAGGATATCATTGAATTCTTCAAGCGTTTCCCCAATGTCGATATGGCTTACGAAGTTCGCGAGGGT GATGATATCAGGGCTGGTGACAATGTAACTGTACAGGTGACCCTGGAGCGTGACATGACGAACTTGCCTTCTGAGGTGGGGCCAGTTCATGCCCCCAGGTACCCA AAGCCCAAGGAAGAAGGCTGGTGGCTGGTAATTGGTGATAGCTCTAC CA ATC AGTTGCTTGCAATCAAGAGGGTTGCACTTCAGAAGAGGGCTCGAGTGAAGCTTGAGTTCACCGCTGCTTCAGAAGCTGGGAGAAAGGAGTACATGATCTACCTGATGTCCGATTCTTATCTGGGCTGCGATCAGGAGTACGAGTTCACCGTCGATGTCATGGATGCTGGAGGGGATTGATCCCAAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGAGCTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTGTTTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGCTACCTGTGGTCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCT                                                                                                                                                   ]
[+] EMBL CB656524             [                                                                                                                      GACTGTATTGAATGACCTAGAATCAAGCAAGTGTGTGGCTATAGAGGAGGATATGTACCTGAAGCCCCTCAACCTTGGTCTGATTGCTTCGTACTACTACATTAGCTACACAACTATTGAGAGGTTCAGTTCAATGCTAACTCAAAAGACTAAGATGAAAGGGCTCCTGGAGATTCTAGCCTCTGCTTCAGAATATGCTGAGCTTCCCAGTCGCCCTGGTGAGGAGGATTTCATTGAGAAGCTTGTTCGCCACCAGAGATTTTCCATCGAGAAGCCCAAGTATGGTGATCCACATGTCAAGGCTAACGCACTGCTGCAAGCTCATTTTTCAAGGCACACTATCTTAGGGAACCTGGCAGCCGACCAGCGGGAGATACTCCTTTCTGCTCATAGATTGCTCCAGGCAATGGTTGATGTTATCTCCAGCAATGGATGGCTTACGCTTGCTCTTAATGCAATGGAGCTGAGTCAAATGGTGACACAAGGCATGTGGGATCGTGATTCTGTTCTTTTACAACTTCCACATTTCACCAAGGAGTTGGCACGGAGATGTCACGAGAATGAAGGGAGGCCCATTGAGAGCATCTTTGATCTGGCTGAGATGAGCATCGATGAGATGCGG GATCTGTTGCAGCAATCAAACCCTCAGCTGCAGGATATCATTGAATTCTTCAAGCGTTTCCCCAATGTCGATATGGCTTACGAAGTTCGCGAGGGT GATGATATCAGGGCTGGTGACAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB665961             [                                                                                                                                                                                                                 TACTACTACATTAGCTACACAACTATTGAGAGGTTCAGTTCAATGCTAACTCAAAAGACTAAGATGAAAGGGCTCCTGGAGATTCTAGCCTCTGCTTCAGAATATGCTGAGCTTCCCAGTCGCCCTGGTGAGGAGGATTTCATTGAGAAGCTTGTTCGCCACCAGAGATTTTCCATCGAGAAGCCCAAGTATGGTGATCCACATGTCAAGGCTAACGCACTGCTGCAAGCTCATTTTTCAAGGCACACTATCTTAGGGAACCTGGCAGCCGACCAGCGGGAGATACTCCTTTCTGCTCATAGATTGCTCCAGGCAATGGTTGATGTTATCTCCAGCAATGGATGGCTTACGCTTGCTCTTAATGCAATGGAGCTGAGTCAAATGGTGACACAAGGCATGTGGGATCGTGATTCTGTTCTTTTACAACTTCCACATTTCACCAAGGAGTTGGCACGGAGATGTCAGGAGAATGAAGGGAGGCCCATTGAGAGCATCTTTGATCTGGCTGAGATGAGCATCGATGAGATGCGG GATCTGTTGCAGCAATCAAACCCTCAGCTGCAGGATATCATTGAATTCTTCAAGCGTTTCCCCAATGTCGATATGGCTTACGAAGTTCGCGAGGGT GATGATATCAGGGCTGGTGACAATGTAACTGTACAGGTGACCCTGGAGCGTGACATGACGAACTTGCCTTCTGAGGTGGGGCCAGTTCATGCCCCCAGGTACCCA AAGCCCAAGGAAGAAGGCTGGTGGCTGGTAATTGGTGATAGCTCTAC CA ATC AGTTGCTTGCAATCAAGAGGGTTGCACTTCAGAAGAGGGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSS1281A             [                                                                                                                                                                                                                                                               TAACTCAAAAGACTAAGATGAAAGGGCTCCTGGAGATTCTAGCCTCTGCTTCAGAATATGCTGAGCTTCCCAGTCGCCCTGGTGAGGAGGATTTCATTGAGAAGCTTGTTCGCCACCAGAGATTTTCCATCGAGAAGCCCAAGTATGGTGATCCACATGTCAAGGCTAACGCACTGCTGCAAGCTCATTTTTCAAGGCACACTATCTTAGGGAACCTGGCAGCCGACCAGCGGGAGATACTCCTTTCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB642259             [                                                                                                                                                                                                                                                                     AAAAGACTAAGATGAAAGGGCTCCTGGAGATTCTAGCCTCTGCTTCAGAATATGCTGAGCTTCCCAGTCGCCCTGGTGAGGAGGATTTCATTGAGAAGCTTGTTCGCCACCAGAGATTTTCCATCGAGAAGCCCAAGTATGGTGATCCACATGTCAAGGCTAACGCACTGCTGCAAGCTCATTTTTCAAGGCACACTATCTTAGGGAACCTGGCAGCCGACCAGCGGGAGATACTCCTTTCTGCTCATAGATTGCTCCAGGCAATGGTTGATGTTATCTCCAGCAATGGATGGCTTACGCTTGCTCTTAATGCAATGGAGCTGAGTCAAATGGTGACACAAGGCATGTGGGATCGTGATTCTGTTCTTTTACAACTTCCACATTTCACCAAGGAGTTGGCACGGAGATGTCAGGAGAATGAAGGGAGGCCCATTGAGAGCATCTTTGATCTGGCTGAGATGAGCATCGATGAGATGCGG GATCTGTTGCAGCAATCAAACCCTCAGCTGCAGGATATCATTGAATTCTTCAAGCGTTTCCCCAATGTCGATATGGCTTACGAAGTTCGCGAGGGT GATGATATCAGGGCTGGTGACAATGTAACTGTACAGGTGACCCTGGAGCGTGACATGACGAACTTGCCTTCTGAGGTGGGGCCAGTTCATGCCCCCAGGTACCCA AAGCCCAAGGAAGAAGGCTGGTGGCTGGTAATTGGTGATAGCTCTAC CA ATC AGTTGCTTGCAATCAAGAGGGTTGCACTTCAGAAGAGGGCTCGAGTGAAGCTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU055824             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TAATGCAATGGAGCTGAGTCAAATGGTGACACAAGGCATATGGGATCGTGATTCTGTTCTTTTACAGCTTCCACATTTCACCAAGGAGTTGGCGCGGAGATGCCAGGAGAATGAAGGGAGGCCCATTGAGAGCATCTTCGATCTGGCTGAGATGAGCATCGATGAGATGCGGNGATCTGTTGCAGCTATCAAACCCTCAGCTACAGGATATCATTGAATTCTTCAAGCGTTTCCCCAATGTCGACATGGCTTACGAATTGGGCGAGGGTGGATGATATCAGGGCTNGTGACAATGTNACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB665962             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCACATTTCACCAAGGAGTTGGCACGGAGATGTCAGGAGAATGAAGGGAGGCCCATTGAGAGCATCTTTGATCTGGCTGAGATGAGCATCGATGAGATGCGG GATCTGTTGCAGCAATCAAACCCTCAGCTGCAGGATATCATTGAATTCTTCAAGCGTTTCCCCAATGTCGATATGGCTTACGAAGTTCGCGAGGGT GATGATATCAGGGCTGGTGACAATGTAACTGTACAGGTGACCCTGGAGCGTGACATGACGAACTTGCCTTCTGAGGTGGGGCCAGTTCATGCCCCCAGGTACCCA AAGCCCAAGGAAGAAGGCTGGTGGCTGGTAATTGGTGATAGCTCTAC CA ATC AGTTGCTTGCAATCAAGAGGGTTGCACTTCAGAAGAGGGCTCGAGTGAAGCTTGAGTTCACCGCTGCTTCAGAAGCTGGGAGAAAGGAGTACATGATCTACCTGATGTCCGATTCTTATCTGGGCTGCGATCAGGAGTACGAGTTCACCGTCGATGTCATGGATGCTGGAGGGGATTGATCCCAAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGAGCTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTGTTTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGCTACCTGTGGTCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCTTCTTGTGATCA                                                                                                                                        ]
[+] EMBL AF074760             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGTGACAATGTAACTGTACAGGTGACCCTGGAGCGTGACATGACNAACTTGCCTTCTGAGGTGGGGCCAGTTCATGCCCCCAGGTACCCA AAGCCCAAGGAAGAAGGCTGGTGGCTGGTAATTGGTGATAGCTCTAC CA ATC AGTTGCTTGCAATCAAGAGGGTTGCACTTCAGAAAANGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BI812565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGTACCCAGAAGCCCGA GAAGAA GCTGGTGGCTGGTAATTGGTGATA CTCTACACACATCAAGTTGCTTGCAATCAAGAGGGTTGCACTTCAGAAGAGGGCTCGAGTGAAGCTTGAGTTCACCCCTGCTTCAGAA CTGGGAGAAAGGAGTACATGATCTACCTGATGTCCGATTCTTATCTGGGCTGCGATCAGGAGTACGAGTTCACCGTCGATGTCATGGATGCTGGAGGGGATTGATCCCAAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGAGCTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTGTTTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGCTACCTGTGGTCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCTTCTTGTGAAAAAAAaaa                                                                                                                                  ]
[-] EMBL CF310734             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGGTGGCTGGTAATTGGTGATAGCTCTAC CA ATC AGTTGCTTGCAATCAAGAGGGTTGCACTTCAGAAGAGGGCTCGAGTGAAGCTTGAGTTCACCGCTGCTTCAGAAGCTGGGAGAAAGGAGTACATGATCTACCTGATGTCCGATTCTTATCTGGGCTGCGATCAGGAGTACGAGTTCACCGTCGATGTCATGGATGCTGGAGGGGATTGATCCCAAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGAGCTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTGTTTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGCTACCTGTGGTCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCTTCTTGTGATCATCCTTCTTATTGTGTTTTTGTCTTCCTGTTTCATCAAAGCAAGTCACTAACGTTTTGATTCTTATCTATATCATTTTATCATGCCGTTGGTTTGGCCCGTATTAAAAAAAAAAAAAAAAAACACTGTCATGCCCGT]
[-] EMBL CB631381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTTCACCGCTGCTTCAGAAGCTGGGAGAAAGGAGTACATGATCTACCTGATGTCCGATTCTTATCTGGGCTGCGATCAGGAGTACGAGTTCACCGTCGATGTCATGGATGCTGGAGGGGATTGATCCCAAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGAGCTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTGTTTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGCTACCTGTGGCCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCTTCTTGTGATC   ATCCTTATAGTGTTTTTGTCTTCCTGTTTCATCAAAGCAAGTCACTAACGTTTTGAT                                                                             ]


>consensus_13123#0 CTGTGGATTACCTTACTTGGACCTTCATGTACAGGCGGCTGACCAAGAACCCTAACTACT ACAATCTGCAGGGCGTGAGCCACAGGCATTTGTCGGACCATTTATCTGAGTTGGTTGAGA CTGTATTGAATGACCTAGAATCAAGCAAGTGTGTGGCTATAGAGGAGGATATGTACCTGA AGCCCCTCAACCTTGGTCTGATTGCTTCGTACTACTACATTAGCTACACAACTATTGAGA GGTTCAGTTCAATGCTAACTCAAAAGACTAAGATGAAAGGGCTCCTGGAGATTCTAGCCT CTGCTTCAGAATATGCTGAGCTTCCCAGTCGCCCTGGTGAGGAGGATTTCATTGAGAAGC TTGTTCGCCACCAGAGATTTTCCATCGAGAAGCCCAAGTATGGTGATCCACATGTCAAGG CTAACGCACTGCTGCAAGCTCATTTTTCAAGGCACACTATCTTAGGGAACCTGGCAGCCG ACCAGCGGGAGATACTCCTTTCTGCTCATAGATTGCTCCAGGCAATGGTTGATGTTATCT CCAGCAATGGATGGCTTACGCTTGCTCTTAATGCAATGGAGCTGAGTCAAATGGTGACAC AAGGCATGTGGGATCGTGATTCTGTTCTTTTACAACTTCCACATTTCACCAAGGAGTTGG CACGGAGATGTCAGGAGAATGAAGGGAGGCCCATTGAGAGCATCTTTGATCTGGCTGAGA TGAGCATCGATGAGATGCGGGATCTGTTGCAGCAATCAAACCCTCAGCTGCAGGATATCA TTGAATTCTTCAAGCGTTTCCCCAATGTCGATATGGCTTACGAAGTTCGCGAGGGTGATG ATATCAGGGCTGGTGACAATGTAACTGTACAGGTGACCCTGGAGCGTGACATGACGAACT TGCCTTCTGAGGTGGGGCCAGTTCATGCCCCCAGGTACCCAAAGCCCAAGGAAGAAGGCT GGTGGCTGGTAATTGGTGATAGCTCTACCAATCAGTTGCTTGCAATCAAGAGGGTTGCAC TTCAGAAGAGGGCTCGAGTGAAGCTTGAGTTCACCGCTGCTTCAGAAGCTGGGAGAAAGG AGTACATGATCTACCTGATGTCCGATTCTTATCTGGGCTGCGATCAGGAGTACGAGTTCA CCGTCGATGTCATGGATGCTGGAGGGGATTGATCCCAAGGCCAGAAAGAGGATGAAAGCT TTGCCCAGCCCCCAGGTGTGTATGGAGCTGGGTGGTTGCTTGTACGCTCGTAGCAATTCC TAATGTCCTATCCACACTTGTATGTGTTTGTACTCGTTTTTATCTTTAGCCATTTTCTTA GTGTAACTGATGCTCACCTCTGCTGCTACCTGTGGTCATCTTTGGGGATCTTTATTAGCT AGCCTATGGCTGTGCTTCTTGTGATCAAAATACTTATTGTGTTTTTGTCTTCCTGTTTCA TCAAAGCAAGTCACTAACGTTTTGATTCTTATCTATATCATTTTATCATGCCGTTGGTTT GGCCCGTATTAAAAAAAAAAAAAAAAAACACTGTCATGCCCGT



consensusID : consensus_13123#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 610
fasta sequence
                              [CCGGGNAAAANNNNGGNGCNNGAANNTTTNCTTTTAAGGCCCCTNGGNNNTAAAAANAAAATTCCCNTTTAGGGGGGNCNAATTTNNCCCCCCGNGGNTCCCCAAAACCCCAAGGGAAAAAACNTGGTGNCCTGGAAAATGGGGGGANNACCNTNCCCAAATAAAGTTGCCTTNGNAAATNCAAAGNGGGTTTNCNNNTTCNAGAAGGNGGNCCCCNAATTNAAGCTTGAAGTTCNCCGCTGCNTTCNAAAAGCTGGGGAAAAAAGAGTNACATGATCTACCTGATNTCCCGATTCCTTAATCTGGGCTGCGATCAGGAGTACGAGTTCCACCGTCGAATGTCCATGGATGCTGGAGGGGATTGATCCCCAAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGAGCTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTGTTTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGCTACCTGTGGTCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCTTCTTGTGATCATCCTTCTTA]

[-] EMBL BE229009             [CCGGGNAAAANNNNGGNGCNNGAANNTTTNCTTTTAAGGCCCCTNGGNNNTAAAAANAAAATTCCCNTTTAGGGGGGNCNAATTTNNCCCCCCGNGGNTCCCCAAAACCCCAAGGGAAAAAACNTGGTGNCCTGGAAAATGGGGGGANNACCNTNCCCAAATAAAGTTGCCTTNGNAAATNCAAAGNGGGTTTNCNNNTTCNAGAAGGNGGNCCCCNAATTNAAGCTTGAAGTTCNCCGCTGCNTTCNAAAAGCTGGGGAAAAAAGAGTNACATGATCTACCTGATNTCCCGATTCCTTAATCTGGGCTGCGATCAGGAGTACGAGTTCCACCGTCGAATGTCCATGGATGCTGGAGGGGATTGATCCCCAAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGAGCTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTGTTTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGCTACCTGTGGTCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCTTCTTGTGATCATCCTTCTTA]


>consensus_13123#1 CCGGGNAAAANNNNGGNGCNNGAANNTTTNCTTTTAAGGCCCCTNGGNNNTAAAAANAAA ATTCCCNTTTAGGGGGGNCNAATTTNNCCCCCCGNGGNTCCCCAAAACCCCAAGGGAAAA AACNTGGTGNCCTGGAAAATGGGGGGANNACCNTNCCCAAATAAAGTTGCCTTNGNAAAT NCAAAGNGGGTTTNCNNNTTCNAGAAGGNGGNCCCCNAATTNAAGCTTGAAGTTCNCCGC TGCNTTCNAAAAGCTGGGGAAAAAAGAGTNACATGATCTACCTGATNTCCCGATTCCTTA ATCTGGGCTGCGATCAGGAGTACGAGTTCCACCGTCGAATGTCCATGGATGCTGGAGGGG ATTGATCCCCAAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGA GCTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTG TTTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGC TACCTGTGGTCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCTTCTTGTGATC ATCCTTCTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13123#0      CTGTGGATTACCTTACTTGGACCTTCATGTACAGGCGGCTGACCAAGAACCCTAACTACT 60
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      ACAATCTGCAGGGCGTGAGCCACAGGCATTTGTCGGACCATTTATCTGAGTTGGTTGAGA 120
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      CTGTATTGAATGACCTAGAATCAAGCAAGTGTGTGGCTATAGAGGAGGATATGTACCTGA 180
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      AGCCCCTCAACCTTGGTCTGATTGCTTCGTACTACTACATTAGCTACACAACTATTGAGA 240
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      GGTTCAGTTCAATGCTAACTCAAAAGACTAAGATGAAAGGGCTCCTGGAGATTCTAGCCT 300
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      CTGCTTCAGAATATGCTGAGCTTCCCAGTCGCCCTGGTGAGGAGGATTTCATTGAGAAGC 360
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      TTGTTCGCCACCAGAGATTTTCCATCGAGAAGCCCAAGTATGGTGATCCACATGTCAAGG 420
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      CTAACGCACTGCTGCAAGCTCATTTTTCAAGGCACACTATCTTAGGGAACCTGGCAGCCG 480
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      ACCAGCGGGAGATACTCCTTTCTGCTCATAGATTGCTCCAGGCAATGGTTGATGTTATCT 540
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      CCAGCAATGGATGGCTTACGCTTGCTCTTAATGCAATGGAGCTGAGTCAAATGGTGACAC 600
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      AAGGCATGTGGGATCGTGATTCTGTTCTTTTACAACTTCCACATTTCACCAAGGAGTTGG 660
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      CACGGAGATGTCAGGAGAATGAAGGGAGGCCCATTGAGAGCATCTTTGATCTGGCTGAGA 720
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      TGAGCATCGATGAGATGCGGGATCTGTTGCAGCAATCAAACCCTCAGCTGCAGGATATCA 780
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      TTGAATTCTTCAAGCGTTTCCCCAATGTCGATATGGCTTACGAAGTTCGCGAGGGTGATG 840
consensus_13123#1      -----------------------------------------------------CCGGGNA 7
                                                                               *   

consensus_13123#0      ATATCAGGGCTGGTGACAATGTAACTGTACAGGTGACCCTGGAGCGTGACATGACGAACT 900
consensus_13123#1      AAANNNNGGNGCNNGAANNTTTNCTTTTA-AGGC--CCCTNGGNNNTAAAA--ANAAAAT 62
                       * *    **     **   * *   * ** ***   **** *    * * *  *  ** *

consensus_13123#0      TGCCTTCTGAGGTGGGGCCAGTTCATGCCCCCAGGTA--CCCAAAGCCC--AAGGAAGAA 956
consensus_13123#1      TCCCNTTT-AGGGGGGNCNAATTTNNCCCCCCGNGGNTCCCCAAAACCCCAAGGGAAAAA 121
                       * ** * * *** *** * * **    *****  *    ****** ***  * **** **

consensus_13123#0      GGCTGGTGGC-TGGTAATTGGTG--ATAGCTCTACC--AATCA-GTTGC--TTGCAA--T 1006
consensus_13123#1      ACNTGGTGNCCTGGAAAATGGGGGGANNACCNTNCCCAAATAAAGTTGCCTTNGNAAATN 181
                          ***** * *** ** *** *  *   *  * **  *** * *****  * * **   

consensus_13123#0      CAAGAGGG----TTGCACTTCAGAAGAGGGCTC---GAGTGAAGCTTGA-GTTCACCGCT 1058
consensus_13123#1      CAAAGNGGGTTTNCNNNTTCNAGAAGGNGGNCCCCNAATTNAAGCTTGAAGTTCNCCGCT 241
                       ***   **          *  *****  **  *    * * ******** **** *****

consensus_13123#0      GCTT--CAGAAGCTGGG--AGAAAGGAGTACATGATCTACCTGATGTCC-GATTCTT--A 1111
consensus_13123#1      GCNTTCNAAAAGCTGGGGAAAAAAGAGTNACATGATCTACCTGATNTCCCGATTCCTTAA 301
                       ** *   * ********  * ****    **************** *** ***** *  *

consensus_13123#0      TCTGGGCTGCGATCAGGAGTACGAGTTC-ACCGTCGA-TGTC-ATGGATGCTGGAGGGGA 1168
consensus_13123#1      TCTGGGCTGCGATCAGGAGTACGAGTTCCACCGTCGAATGTCCATGGATGCTGGAGGGGA 361
                       **************************** ******** **** *****************

consensus_13123#0      TTGATCCC-AAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGAG 1227
consensus_13123#1      TTGATCCCCAAGGCCAGAAAGAGGATGAAAGCTTTGCCCAGCCCCCAGGTGTGTATGGAG 421
                       ******** ***************************************************

consensus_13123#0      CTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTGT 1287
consensus_13123#1      CTGGGTGGTTGCTTGTACGCTCGTAGCAATTCCTAATGTCCTATCCACACTTGTATGTGT 481
                       ************************************************************

consensus_13123#0      TTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGCT 1347
consensus_13123#1      TTGTACTCGTTTTTATCTTTAGCCATTTTCTTAGTGTAACTGATGCTCACCTCTGCTGCT 541
                       ************************************************************

consensus_13123#0      ACCTGTGGTCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCTTCTTGTGATCA 1407
consensus_13123#1      ACCTGTGGTCATCTTTGGGGATCTTTATTAGCTAGCCTATGGCTGTGCTTCTTGTGATCA 601
                       ************************************************************

consensus_13123#0      AAATACTTATTGTGTTTTTGTCTTCCTGTTTCATCAAAGCAAGTCACTAACGTTTTGATT 1467
consensus_13123#1      TCCTTCTTA--------------------------------------------------- 610
                          * ****                                                   

consensus_13123#0      CTTATCTATATCATTTTATCATGCCGTTGGTTTGGCCCGTATTAAAAAAAAAAAAAAAAA 1527
consensus_13123#1      ------------------------------------------------------------
                                                                                   

consensus_13123#0      ACACTGTCATGCCCGT 1543
consensus_13123#1      ----------------
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)