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Oryza sativa
cluster # 13140 cluster # 13140       Sequences # 12       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13140#0 length = 1331 sequences # 9  
consensus_13140#1 length = 1080 sequences # 3  

consensusID : consensus_13140#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1331
fasta sequence
                              [GGCTGGCAGAAATGGAGAGCTTTCAGGTGAAACCTTCATATTCTTCAACAAGCAGATTAAAGGGAACAAGAGGGAGATCATTCAGCTTGGCGTCCCACTATTTCAGCCCACCACAGAGGAATCTAATTGTCACATAGAAGCAATCCCCCTTGTCCTCCAGGCTGTCATTGATCATCTTGTTCTTTGGCGTTTAATACCAGAAAGCAGGAAACCTAACAGTGTCATCATCAACTTCTTCGATGAGGATGAGCACTCGCAGCCCTACTTCAAGCCTCCTCACCTGGACAACCCAATCTCCACTCTCCTGCTGTCCGAGACTACGATGGCATTTGGAAGGTCACTTGTCACTGACAGCAATGGCAACTACAAGGGACCCCTTACGCTCTCACTGAAGCAAGGGTCACTCCTGGTGATGCGCGGGAACAGCGCGGACATGGCTCGCCACGTCGTGTGCCCATCGTCCAACCGCCGCGTGAGCATCACGTTCGTGCGCGTGAGGCCGTCGACGCCGGTGGACCTCAGCCCGCTCCCGTCGCCCACCAAGGCCATGACGCTGTGGCAGACGCCGCCGCCGCAGCAGCAGCAGACGATCCCGGCGCCCGGCATGCAGCAGAAGCCGCAGCACGGCGGCGCCATCATCGGCTACGGCCCGGCGCCACAGGCCGTGCTGGCGCCTGCGTGGGGCATGG-CCG-TGCGCGCGGCGCCCGTCATGATGGTCGCCGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACAAGCGGATGAGCCGCAGCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGTACAACAAGCACCTCCCGCCGCGCATCCAGAAGCGCCGGTTCTCGGCGATGATGTCGCCGATCGAGGCCCAGGGC-TGACATCAACAAC-GTCACCTCACC-GGACCTC-GCCAC-GCCTC-GCCGGC-GTCGTC-GTGGTCACCATTAGGCC-GCATTTTCTTCTTC-TTTGAGGCAAACAAAAAAAAAGAAAAGGAAAAAAAAAGTCGAAAACGCGCGGGAAGTTCAGTCTTAATCGGTGTGTCCTCCCTGTGAATTTTGTCGTCGAAGTGGTGACTGGTTGTTTTTGTTTGGTCTGCCTGTAATTTAGCCCGGGTGTGAGTAGCAGAGATGGAAGCGGTAGAATATATGGGTAGGCATAGTTGAGCTCAGGATCAATCAGGAACAGTGTTTTCTTTTTCCCTTTTTGGTTGCGAGAAAGAACTACTGGATGGATGTTCATGTCCTGCTGAGTTTGCAGTAAGCTCTAAATAGTAGAGGTAGATGATGCGTCTGGTGTTAAAAAAAGAAA]

[+] EMBL CB631312             [GGCTGGCAGAAATGGAGAGCTTTCAGGTGAAACCTTCATATTCTTCAACAAGCAGATTAAAGGGAACAAAAGGGAGATCATTCAGCTTGGCGTCCCACTATTTCAGCCCACCACAGAGGAATCTAATTGTCACATAGAAGCAATCCCCCTTGTCCTCCAGGCTGTCATTGATCATCTTGTTCTTTGGCGTTTAATACCAGAAAGCAGGAAACCTAACAGTGTCATCATCAACTTCTTCGATGAGGATGAGCACTCGCAGCCCTACTTCAAGCCTCCTCACCTGGACAACCCAATCTCCACTCTCCTGCTGTCCGAGACTACGATGGCATTTGGAAGGTCACTTGTCACTGACAGCAATGGCAACTACAAGGGACCCCTTACGCTCTCACTGAAGCAAGGGTCACTCCTGGTGATGCGCGGGAACAGCGCGGACATGGCTCGCCACGTCGTGTGCCCATCGTCCAACCGCCGCGTGAGCATCACGTTCGTGCGCGTGAGGCCGTCGACGCCGGTGGACCTCAGCCCGCTCCCGTCGCCCACCAAGGCCATGACGCTGTGGCAGACGCCGCCGCCGCAGCAGCAGCAGCCGATCCCGGCGCCCGGCATGCAGCAGAAGCCGCAGCACGGCGGCGCCATCATCGGCTACGGCCCGGCGCCACAGGCCGTGCTGGCGCCTGCGTGGGGCATGGCCCGTTGCGCGCGGCGCCCGTCATGATGGTCGCCGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACAAGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSS11386A            [ GCTGGCAGAAATGGAGAGCTTTCAGGTGAAACCTTCATATTCTTCAACAAGCAGATTAAAGGGAACAAGAGGGAGATCATTCAGCTTGGCGTCCCACTATTTCAGCCCACCACAGAGGAATCTAATTGTCACATAGAAGCAATCCCCCTTGTCCTCCAGGCTGTCATTGATCATCTTGTTCTTTGGCGTTTAATACCAGAAAGCAGGAAACCTAACAGTGTCATCATCAACTTCTTCGATGAGGATGAGCACTCGCAGCCCTACTTCAAGCCTCCTCACCTGGACAACCCAATCTCCACTCTCCTGCTGTCCGAGNNTACGNTGGCATTTGGAAGGTCACTTGTCACTGACAGCAATGGCAACTACAAGGGA CCCTTACGGTCTCACTGAAGGAAGGG CACT CTGGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU166718             [ GCTGGCAGAAATGGAGAGCTTTCAGGTGAAACCTTCATATTCTTCAACAAGCAGATTAAAGGGAACAAGAGGGAGATCATTCAGCTTGGCGTCCCACTATTTCAGCCCACCACAGAGGAATCTAATTGTCACATAGAAGCAATCCCCCTTGTCCTCCAGGCTGNCATTGATCATCTTGTTCTTTGGCGTTTAATACCAGAAAGCAGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL C72149               [                                                                           GATCATTCAGCTTGGCGTCCCACTATTTCAGCCCACCACAGAGGAATCTAATTGTCACATAGAAGCAATCCCCCTTGTCCTCCAGGCTGTCATTGATCATCTTGTTCTTTGGCGTTTAATACCAGAAAGCAGGAAACCTAACAGTGTCATCATCAACTTCTTCGATGAGGATGAGCACTCGCAGCCCTACTTCAAGCCTCCTCACCTGGACAACCCAATCTCCACTCTCCTGCTGTCCGAGACTACGATGGCATTTGGAAGGTCACTTGTCACTGACAGCAATGGCAACTACAAGGGACCCCTTACGCTCTCACTGAAGCAAGGGTCACTCCTGGTGATGCGCGGGAACAGCGCGGACATGGCTCGCCACGTCGTGTGCCCATCGTCCAACCGCCGCGTGAGCATCACGTTCGTGCGCGTGAGGCCGTCGATGCCGGTGGACCTCAGCCCGCTCCCGTCGCCCACCAAGGCCATGACGCTGTGGCAGGCGCCGCCGCCGCAGCAGCAGCAGACGATCCCGGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CA755637             [                                                                                                                                                                                                                                                                                                                                                                                                                        GGTGATGCGCGGGAACAGCGCGGACATGGCTCGCCACGTCGTGTGCCCATCGTCCAACCGCCGCGTGAGCATCACGTTCGTGCGCGTGAGGCCGTCGACGCCGGTGGACCTCAGCCCGCTCCCGTCGCCCACCAAGGCCATGACGCTGTGGCAGGCGCCGCCGCCGCAGCAGCAGCAGACGATCCCGGCGCCCGGCATGCAGCAGAAGCCGCAGCACGGCGGCGCCATCATCGGCTACGGCCCGGCGCCGCAGGCCGTGCTGGCGCCTGCGTGGGGCATGG CCG TGCGCGCGGCGCCCGTCATGATGGTCGCCGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACAAGCGGATGAGCCGCAGCGGCACCGGCGTCTTCCTGCCGTGNACGGTCGGGCCCAAGAGGTACAACAAGCACCTCCCGCCGCGCATCCAGAAGCGCCGGTTCTCGGCGATGATGTCGCCGATCGAGGCCCAGGGC TGACATCAACAAC GTCACCTCACC GGACCTC GCCAC GCCTCGGCGGGN GTCGTC GTGGTCACCATTAGGCC GCATTTTCTTCTTCTTTTGAGGCAACCAAAAAAAAAGAc                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB631313             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTGGCAGACGCCGCCGCCGCAGCAGCAGCAGCCGATCCCGGCGCCCGGCATGCAGCAGAAGCCGCAGCACGGCGGCGCCATCATCGGCTACGGCCCGGCGCCACAGGCCGTGCTGGCGCCTGCGTGGGGCATGG CCG TGCGCGCGGCGCCCGTCATGATGGTCGCCGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACAAGCGGATGAGCCGCAGCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGTACAACAAGCACCTCCCGCCGCGCATCCAGAAGCGCCGGTTCTCGGCGATGATGTCGCCGATCGAGGCCCAGGGC TGACATCAACAAC GTCACCTCACC GGACCTC GCCAC GCCTC GCCGGC GTCGTC GTGGTCACCATTAGGCC GCATTTTCTTCTTC TTTGAGGCAAACAAAAAAAAAGAAAAGGAAAAAAAAAGTCGAAAACGCGCGGGAAGTTCAGTCTTAATCGGTGTGTCCTCCCTGTGAATTTTGTCGTCGAAGTGGTGACTGGTTGTTTTTGTTTGGTCTGCCTGTAATTTAGCCCGGGTGTGAGTAGCAGAGATGGAAGCGGTAGAATATATGGGTAGGCATAGTTGAGCTCAGGATCAATCAGGAACAGTGTTTTCTTTTTCCCTTTTTGGTTGCGAGAAAGAACTACTGGATGGATGTTCATGTCCTGCTGAGTTTGCAGTAAGCTCTAAATAGTAGAGGTAGATGATGCGTCTGGTGTTAAAAAAAGAAA]
[+] EMBL AU172462             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCGCAGCAGCAGCAGACGATCCCGGCGCCCGGCATGCAGCAGAAGCCGCAGCACGGCGGCGCCATCATCGGCTACGGCCCGGCGCCGCAGGCCGTGCTGGCGCCTGCGTGGGGCATGG CCG TGCGCGCGGCGCCCGTCATGATGGTCGCCGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACAAGCGGATGAGCCGCAGCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGTACAACAAGCACCTCCCGCCGCGCATCCAGAAGCGCCGGTTCTCGGCGATGATGTCGCCGATCGAGGCCCAGGGCNTGACATCAACAACTGTCACCTCACCTGGACCTCTGCCACTGCCTCTGCCGGCTGTCGTCTGTGGTCACCATTAGGCCTGCATTTTCTTCTTC TTTGAGGCAAACAAAAA                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL C72055               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               nCGAGGCCGATGGTGATGGCCCCCGCCGGCANGAACAAGCGGATNAGCCGCAGCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGTACAACAAGCACCTCCCGCCGCGCATCCAGAAGCGCCGGTTCTCGGCGATGATGTCGCCGATCGAGGCCCAGGGC TNACATNAAAAAC GTCACCTNACC GGACCTC GCCAC GCCTT GCCGGC GTCGTC GTGGTCACCATTAGGCC GCATTTTCTTCTTC TT                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU166717             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCGGCGGCAACAANCGGATGAGCCGCANCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGTACAACAAGCACCTCCCGCCGCGCATCCAGAAGCGCCGGTTCTCGGCGATNATGTCGCCGATCGAGGCCCAGGGC TGACATCAACAAC GTCACCTCACC GGACCTC GCCAC GCCTC GCCGGC GTNGTC GTGGTCACCATTAGGCC GCATTTTCTTCTTC TTTGAGGCAAACAAAAAAAAAGAAAAGGAAAAAAAAAGTCGAAAACGCGCGGGAAGTTCAGTCTTAATCGGTGTGTCCTCCCTGTGAATTTTGTCGTCGAAGTGGTGACTGGTTGTTTTTGTTTGGTCTGCCTGTAATTTAGCCCGGGTGTGAGTAGCAGAGATGGAANCGGTAGAATATATGGGTAGGCATAGTTGAGCTCAGGATCAATCAGGAACAGTGTTTTCTTTTTCCaaaaaaaa                                                                                                     ]


>consensus_13140#0 GGCTGGCAGAAATGGAGAGCTTTCAGGTGAAACCTTCATATTCTTCAACAAGCAGATTAA AGGGAACAAGAGGGAGATCATTCAGCTTGGCGTCCCACTATTTCAGCCCACCACAGAGGA ATCTAATTGTCACATAGAAGCAATCCCCCTTGTCCTCCAGGCTGTCATTGATCATCTTGT TCTTTGGCGTTTAATACCAGAAAGCAGGAAACCTAACAGTGTCATCATCAACTTCTTCGA TGAGGATGAGCACTCGCAGCCCTACTTCAAGCCTCCTCACCTGGACAACCCAATCTCCAC TCTCCTGCTGTCCGAGACTACGATGGCATTTGGAAGGTCACTTGTCACTGACAGCAATGG CAACTACAAGGGACCCCTTACGCTCTCACTGAAGCAAGGGTCACTCCTGGTGATGCGCGG GAACAGCGCGGACATGGCTCGCCACGTCGTGTGCCCATCGTCCAACCGCCGCGTGAGCAT CACGTTCGTGCGCGTGAGGCCGTCGACGCCGGTGGACCTCAGCCCGCTCCCGTCGCCCAC CAAGGCCATGACGCTGTGGCAGACGCCGCCGCCGCAGCAGCAGCAGACGATCCCGGCGCC CGGCATGCAGCAGAAGCCGCAGCACGGCGGCGCCATCATCGGCTACGGCCCGGCGCCACA GGCCGTGCTGGCGCCTGCGTGGGGCATGGCCGTGCGCGCGGCGCCCGTCATGATGGTCGC CGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACAAGCGGATGAG CCGCAGCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGTACAACAAGCA CCTCCCGCCGCGCATCCAGAAGCGCCGGTTCTCGGCGATGATGTCGCCGATCGAGGCCCA GGGCTGACATCAACAACGTCACCTCACCGGACCTCGCCACGCCTCGCCGGCGTCGTCGTG GTCACCATTAGGCCGCATTTTCTTCTTCTTTGAGGCAAACAAAAAAAAAGAAAAGGAAAA AAAAAGTCGAAAACGCGCGGGAAGTTCAGTCTTAATCGGTGTGTCCTCCCTGTGAATTTT GTCGTCGAAGTGGTGACTGGTTGTTTTTGTTTGGTCTGCCTGTAATTTAGCCCGGGTGTG AGTAGCAGAGATGGAAGCGGTAGAATATATGGGTAGGCATAGTTGAGCTCAGGATCAATC AGGAACAGTGTTTTCTTTTTCCCTTTTTGGTTGCGAGAAAGAACTACTGGATGGATGTTC ATGTCCTGCTGAGTTTGCAGTAAGCTCTAAATAGTAGAGGTAGATGATGCGTCTGGTGTT AAAAAAAGAAA



consensusID : consensus_13140#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1080
fasta sequence
                              [GCAATTGGGCCNTNTCAACCCGGGGGANAATTTGNGGGGGAGCNTTGAACCGGGGAATTAACCCTTTCNNTGNCAACAAAGGCANGAAGTTTGGCAGGNCCCCNCCGCAGCAGCAGAGAANATCCNGGCGCCGGCATGAAGCAGAANCGCAAGCACGGGGGGCNATTATCGGTACGGCCCGGGCGCCGCAAGCCCGTGTTGGGCNTGCGTGGGGCATGNCCGTGCGCGCGGCGCCCGTCATGATGGTCGCCGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACAAGCGGATGAGCCGCAGCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGTACAACAAGCACCTCCCGCCGCGCATCCAGAAGCGCCGGTTNTCGGCGATGATGTCGCCGATCGAGGCCCAGGGCTGACATCAACAACGTCACCTCACCGGACCTCGCCACGCCTCGCCGGCGTNGTCGTGGTCACCATTAGGCCGCATTTTNTTTTTNTTTGAGGCAAACAAAAAAAAAAAAAAGGAAAAAAAAAGTCGAAAACGCGCGGGAAGTTCAGTCTTAATCGGTGTGTCCTCCCTGTGAATTTTGTCGTCGAAGTGGTGACTGGTTGTTTTTGTTTGGTCTGCCTGTAATTTAGCCCGGGTGTGAGTAGCAGAGATGGAAGCGGTAGAATATATGGGTAGGCATAGTTGAGCTCAGGATCAATCAGGAACAGTGTTTTCTTTTTCCCTTTTTGGTTGCGAGAAAGAACTACTGGATGGATGTTCATGTCCTGCTGAGTTTGCGGTAAGCTCTAAATAGTAGAGGTAGATGATGCGTCTGGTGTTGCTCACTTTGTTTGGTTTGTACCAGCAGATGTACCTAGTTATGCTTATGCATCGATTTTAATTGTTTGTATATAGGATTTGCCAGCACCAATCGTTGAGTTATTCTCCTACCAGTAAATGTGATGAATGGATACTCCAACTGAAGAGATAGGAGATGACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCG]

[+] EMBL AA753951             [GCAATTGGGCCNTNTCAACCCGGGGGANAATTTGNGGGGGAGCNTTGAACCGGGGAATTAACCCTTTCNNTGNCAACAAAGGCANGAAGTTTGGCAGGNCCCCNCCGCAGCAGCAGAGAANATCCNGGCGCCGGCATGAAGCAGAANCGCAAGCACGGGGGGCNATTATCGGTACGGCCCGGGCGCCGCAAGCCCGTGTTGGGCNTGCGTGGGGCATGNCCGTGCGCGCGGCGCCCGTCATGATGGTCGCCGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACAAGCGGATGAGCCGCAGCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGTACAACAAGCACCTCCCGCCGCGCATCCAGAAGCGCCGGTTNTCGGCGATGATGTCGCCGATCGAGGCCCAGGGCTGACATCAACAACGTCACCTCACCGGACCTCGCCACGCCTCGCCGGCGTNGTCGTGGTCACCATTAGGCCGCATTTTNTTTTTNTTTGAGGCAAACAAAAAAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK058850             [                                                                                                                                                                                                                                                                                                                                                                                         CCGCGCATCCAGAAGCGCCGGTTCTCGGCGATGATGTCGCCGATCGAGGCCCAGGGCTGACATCAACAACGTCACCTCACCGGACCTCGCCACGCCTCGCCGGCGTCGTCGTGGTCACCATTAGGCCGCATTTTCTTCTTCTTTGAGGCAAACAAAAAAAAAGAAAAGGAAAAAAAAAGTCGAAAACGCGCGGGAAGTTCAGTCTTAATCGGTGTGTCCTCCCTGTGAATTTTGTCGTCGAAGTGGTGACTGGTTGTTTTTGTTTGGTCTGCCTGTAATTTAGCCCGGGTGTGAGTAGCAGAGATGGAAGCGGTAGAATATATGGGTAGGCATAGTTGAGCTCAGGATCAATCAGGAACAGTGTTTTCTTTTTCCCTTTTTGGTTGCGAGAAAGAACTACTGGATGGATGTTCATGTCCTGCTGAGTTTGCGGTAAGCTCTAAATAGTAGAGGTAGATGATGCGTCTGGTGTTGCTCACTTTGTTTGGTTTGTACCAGCAGATGTACCTAGTTATGCTTATGCATCGATTTTAATTGTTTGTATATAGGATT                                                                                                                                                       ]
[+] EMBL CF333117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CAGCAGATGTACCTAGTTATGCTTATGCATCGATTTTAATTGTTTGTATATAGGATTTGCCAGCACCAATCGTTGAGTTATTCTCCTACCAGTAAATGTGATGAATGGATACTCCAACTGAAGAGATAGGAGATGACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCG]


>consensus_13140#1 GCAATTGGGCCNTNTCAACCCGGGGGANAATTTGNGGGGGAGCNTTGAACCGGGGAATTA ACCCTTTCNNTGNCAACAAAGGCANGAAGTTTGGCAGGNCCCCNCCGCAGCAGCAGAGAA NATCCNGGCGCCGGCATGAAGCAGAANCGCAAGCACGGGGGGCNATTATCGGTACGGCCC GGGCGCCGCAAGCCCGTGTTGGGCNTGCGTGGGGCATGNCCGTGCGCGCGGCGCCCGTCA TGATGGTCGCCGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACA AGCGGATGAGCCGCAGCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGT ACAACAAGCACCTCCCGCCGCGCATCCAGAAGCGCCGGTTNTCGGCGATGATGTCGCCGA TCGAGGCCCAGGGCTGACATCAACAACGTCACCTCACCGGACCTCGCCACGCCTCGCCGG CGTNGTCGTGGTCACCATTAGGCCGCATTTTNTTTTTNTTTGAGGCAAACAAAAAAAAAA AAAAGGAAAAAAAAAGTCGAAAACGCGCGGGAAGTTCAGTCTTAATCGGTGTGTCCTCCC TGTGAATTTTGTCGTCGAAGTGGTGACTGGTTGTTTTTGTTTGGTCTGCCTGTAATTTAG CCCGGGTGTGAGTAGCAGAGATGGAAGCGGTAGAATATATGGGTAGGCATAGTTGAGCTC AGGATCAATCAGGAACAGTGTTTTCTTTTTCCCTTTTTGGTTGCGAGAAAGAACTACTGG ATGGATGTTCATGTCCTGCTGAGTTTGCGGTAAGCTCTAAATAGTAGAGGTAGATGATGC GTCTGGTGTTGCTCACTTTGTTTGGTTTGTACCAGCAGATGTACCTAGTTATGCTTATGC ATCGATTTTAATTGTTTGTATATAGGATTTGCCAGCACCAATCGTTGAGTTATTCTCCTA CCAGTAAATGTGATGAATGGATACTCCAACTGAAGAGATAGGAGATGACCAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13140#0      GGCTGGCAGAAATGGAGAGCTTTCAGGTGAAACCTTCATATTCTTCAACAAGCAGATTAA 60
consensus_13140#1      ------------------------------------------------------------
                                                                                   

consensus_13140#0      AGGGAACAAGAGGGAGATCATTCAGCTTGGCGTCCCACTATTTCAGCCCACCACAGAGGA 120
consensus_13140#1      ------------------------------------------------------------
                                                                                   

consensus_13140#0      ATCTAATTGTCACATAGAAGCAATCCCCCTTGTCCTCCAGGCTGTCATTGATCATCTTGT 180
consensus_13140#1      ------------------------------------------------------------
                                                                                   

consensus_13140#0      TCTTTGGCGTTTAATACCAGAAAGCAGGAAACCTAACAGTGTCATCATCAACTTCTTCGA 240
consensus_13140#1      ------------------------------------------------------------
                                                                                   

consensus_13140#0      TGAGGATGAGCACTCGCAGCCCTACTTCAAGCCTCCTCACCTGGACAACCCAATCTCCAC 300
consensus_13140#1      ------------------------------------------------------------
                                                                                   

consensus_13140#0      TCTCCTGCTGTCCGAGACTACGATGGCATTTGGAAGGTCACTTGTCACTGACAGCAATGG 360
consensus_13140#1      ------------------------------------------------------------
                                                                                   

consensus_13140#0      CAACTACAAGGGACCCCTTACGCTCTCACTGAAGCAAGGGTCACTCCTGGTGATGCGCGG 420
consensus_13140#1      ------------------------------------------------------------
                                                                                   

consensus_13140#0      GAACAGCGCGGACATGGCTCGCCACGTCGTGTGCCCATCGTCCAACCGCCGCGTGAGCAT 480
consensus_13140#1      ---------------------------------GCAATTGGGCCNTNTCAACCCGGGGGA 27
                                                         * ** *  *     *  *  * *   

consensus_13140#0      CACGTTCGTGCGCGTGAGGCCGTCGACGCCGGTGGACCTCAGCCCGCTCCCGTCGCCCAC 540
consensus_13140#1      NA-----ATTTGNGGGGGAGCNTTGA-ACCGGGGAA--TTAACCC--TTTCNNTGNCAAC 77
                        *      *  * * * *  * * **  **** * *  * * ***  *  *   * * **

consensus_13140#0      CAAGGCCATGACGCTGTGGCAGACGCCGCCGCCGCAGCAGCAGCAGACGATCCCGGCGCC 600
consensus_13140#1      AAAGGC-ANGAAGTT-TGGCAG--GNCCCCNCCGCAGCAGCAG-AGAANATCCNGGCGCC 132
                        ***** * ** * * ******  * * ** ************ ***  **** ******

consensus_13140#0      CGGCATGCAGCAGAAGCCGCAGCACGGCGGCGCCATCATCGGCTACGGCCCGG-CGCCAC 659
consensus_13140#1      -GGCATGAAGCAGAANCGCAAGCACGG-GGGGCNATTATCGG-TACGGCCCGGGCGCCGC 189
                        ****** ******* *   ******* ** ** ** ***** ********** **** *

consensus_13140#0      AGGCC-GTGCTGGCGCCTGCGTGGGGCATGGCCGTGCGCGCGGCGCCCGTCATGATGGTC 718
consensus_13140#1      AAGCCCGTGTTGG-GCNTGCGTGGGGCATGNCCGTGCGCGCGGCGCCCGTCATGATGGTC 248
                       * *** *** *** ** ************* *****************************

consensus_13140#0      GCCGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACAAGCGGATG 778
consensus_13140#1      GCCGCGCCCGCGCCGGCGAGGCCGATGGTGATGGCCCCCGCCGGCGGCAACAAGCGGATG 308
                       ************************************************************

consensus_13140#0      AGCCGCAGCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGTACAACAAG 838
consensus_13140#1      AGCCGCAGCGGCACCGGCGTCTTCCTGCCGTGGACGGTCGGGCCCAAGAGGTACAACAAG 368
                       ************************************************************

consensus_13140#0      CACCTCCCGCCGCGCATCCAGAAGCGCCGGTTCTCGGCGATGATGTCGCCGATCGAGGCC 898
consensus_13140#1      CACCTCCCGCCGCGCATCCAGAAGCGCCGGTTNTCGGCGATGATGTCGCCGATCGAGGCC 428
                       ******************************** ***************************

consensus_13140#0      CAGGGCTGACATCAACAACGTCACCTCACCGGACCTCGCCACGCCTCGCCGGCGTCGTCG 958
consensus_13140#1      CAGGGCTGACATCAACAACGTCACCTCACCGGACCTCGCCACGCCTCGCCGGCGTNGTCG 488
                       ******************************************************* ****

consensus_13140#0      TGGTCACCATTAGGCCGCATTTTCTTCTTCTTTGAGGCAAACAAAAAAAAAGAAAAGGAA 1018
consensus_13140#1      TGGTCACCATTAGGCCGCATTTTNTTTTTNTTTGAGGCAAACAAAAAAAAAAAAAAGGAA 548
                       *********************** ** ** ********************* ********

consensus_13140#0      AAAAAAAGTCGAAAACGCGCGGGAAGTTCAGTCTTAATCGGTGTGTCCTCCCTGTGAATT 1078
consensus_13140#1      AAAAAAAGTCGAAAACGCGCGGGAAGTTCAGTCTTAATCGGTGTGTCCTCCCTGTGAATT 608
                       ************************************************************

consensus_13140#0      TTGTCGTCGAAGTGGTGACTGGTTGTTTTTGTTTGGTCTGCCTGTAATTTAGCCCGGGTG 1138
consensus_13140#1      TTGTCGTCGAAGTGGTGACTGGTTGTTTTTGTTTGGTCTGCCTGTAATTTAGCCCGGGTG 668
                       ************************************************************

consensus_13140#0      TGAGTAGCAGAGATGGAAGCGGTAGAATATATGGGTAGGCATAGTTGAGCTCAGGATCAA 1198
consensus_13140#1      TGAGTAGCAGAGATGGAAGCGGTAGAATATATGGGTAGGCATAGTTGAGCTCAGGATCAA 728
                       ************************************************************

consensus_13140#0      TCAGGAACAGTGTTTTCTTTTTCCCTTTTTGGTTGCGAGAAAGAACTACTGGATGGATGT 1258
consensus_13140#1      TCAGGAACAGTGTTTTCTTTTTCCCTTTTTGGTTGCGAGAAAGAACTACTGGATGGATGT 788
                       ************************************************************

consensus_13140#0      TCATGTCCTGCTGAGTTTGCAGTAAGCTCTAAATAGTAGAGGTAGATGATGCGTCTGGTG 1318
consensus_13140#1      TCATGTCCTGCTGAGTTTGCGGTAAGCTCTAAATAGTAGAGGTAGATGATGCGTCTGGTG 848
                       ******************** ***************************************

consensus_13140#0      TTAAAAAAAGAAA----------------------------------------------- 1331
consensus_13140#1      TTGCTCACTTTGTTTGGTTTGTACCAGCAGATGTACCTAGTTATGCTTATGCATCGATTT 908
                       **    *                                                     

consensus_13140#0      ------------------------------------------------------------
consensus_13140#1      TAATTGTTTGTATATAGGATTTGCCAGCACCAATCGTTGAGTTATTCTCCTACCAGTAAA 968
                                                                                   

consensus_13140#0      ------------------------------------------------------------
consensus_13140#1      TGTGATGAATGGATACTCCAACTGAAGAGATAGGAGATGACCAAAAAAAAAAAAAAAAAA 1028
                                                                                   

consensus_13140#0      ----------------------------------------------------
consensus_13140#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCG 1080
                                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)