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Oryza sativa
cluster # 1315 cluster # 1315       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1315#0 length = 3215 sequences # 2  

consensusID : consensus_1315#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3215
fasta sequence
                              [AGCCCCACACACGCACTCCCCTCGCCCTCGCCCTCGCCGTTTTGCCCGCCAATAGCAAGCGGAAGCTGGGGGAATCTGCGGTGGCTTTTTCGCCTCGTTGTGCCGTGTCATCTCCTCCTCCTCCTCCTGCCGATGATGATGCTGCTGCTGCCGAGTTCCTCCTCCTCCTGCTGCTGTCGCTGCCCCGGCGGGCAGTTCCACGGAGCTCCACCCCGCGTGATGGCGCCTCGTCGTGGGGTCACCAGAGTATATATTGAGAAGAGATTGGGAGTAGGAGGGGGAAATGCATCAAGCCTGCAAGACATGCACAGGAAGGAGCTCCAGGCAAGGACAAGGGACCAGCTCCAGACATTGGAGTTATCTACGTCTTTGTACGACACGGCGTGGGTGGCCATGGTGCCACTGCGGGGTTCCCGTCAGCATCCGAAGTTTCCCTCAGGATAGCTGGAGCCCATTACGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTCCGGTGAGCCGCGCCACGGAATCGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCTGGTTACGGTGCCGAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCCACACCAGGCCATCTGGGCGAGCGCCATGCCCCGATGAGTAGGAGGGCGCGGCGGCCGCCGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGGGTACAAGAGGATTCGGCGTGGCGGTCACAAGAGATGTTCTGTCGTCTACGTTGGCGTGTGTTCTTGCACTCAAGAGATGGAATGTTGGGCAGGAGCACATCAGGAGAGGACTAGATTTTATTGGAAGGAATTTCTCCATTGCCATGGATGAGCAGATTGCTGCTCCTGTTGGTTTCAACATCACTTTTCCTGGTATGCTTAGCCTTGCCATGGGGATGGATTTAGAATTCCCTGTCAGACAGACGGATGTTGATAGACTTCTTCACCTCCGGGAGATAGAACTGGAAAGAGAGGCTGGAGACCATTCTTATGGAAGAAAGGCATATATGGCTTATGTCACAGAAGGATTAGGAAACCTGTTGGAGTGGGATGAGATTATGATGTTCCAGAGGAAGAATGGATCATTTTTCAACTGTCCTTCCACAACTGCTGCCACATTAGTCAACCACTATAACGATAAAGCCCTCCAGTACTTAAATTGTCTGGTTAGTAAATTTGGCAGTGCAGTACCAACAGTGTATCCACTAAACATATATTGTCAGCTTTCATGGGTGGATGCACTTGAAAAGATGGGAATTTCTCAGTATTTTGTCAGTGAGATAAAGAGCATCCTAGACACAACATACGTTTCATGGTTAGAAAGAGATGAGGAAATTATGCTGGACATAACGACATGTGCAATGGCTTTTCGCCTGTTAAGGATGAATGGGTATCATGTTTCCTCAGTCGAGCTATCTCCTGTTGCTGAAGCTTCCAGTTTCCGTGAATCACTTCAAGGATATTTAAATGATAAGAAATCTCTAATCGAATTATACAAGGCTTCAAAAGTCAGTAAATCAGAAAATGAATCAATCTTAGATAGCATAGGCTCTTGGTCAGGTAGCTTATTGAAGGAAAGTGTGTGCTCTAATGGGGTGAAAAAAGCTCCAATCTTTGAAGAGATGAAGTATGCTCTTAAGTTTCCCTTCTACACCACACTGGACCGTCTAGATCACAAGAGGAACATTGAACGTTTTGATGCAAAGGATTCCCAGATGTTAAAGACGGAATACTTGCTTCCTCATGCCAATCAAGATATTCTAGCTTTGGCTGTTGAAGATTTCAGTAGTTCTCAATCTATATACCAGGATGAACTTAATTATCTTGAGTGTTGGGTGAAAGATGAAAAGCTCGATCAGCTGCCATTTGCACGCCAGAAGTTGACATATTGCTACCTTTCTGCTGCTGCTACCATATTCCCCCGTGAATTGTCTGAAGCCCGCATTGCATGGGCTAAAAATGGTGTACTGACAACTGTTGTTGATGACTTCTTTGATCTTGGGGGATCAAAAGAAGAACTAGAAAACCTCATTGCTTTAGTTGAGAAGTGGGATGGACATCAAGAGGAGTTCTACTCAGAACAAGTAAGAATAGTTTTTTCTGCTATTTATACTACAGTGAACCAGCTTGGAGCAAAGGCTTCTGCATTACAAGGCCGTGATGTTACAAAACACCTAACAGAAATATGGTTATGTCTGATGAGGTCTATGATGACCGAAGCTGAATGGCAGAGGACAAAATATGTGCCGACAATGGAAGAATATATGGCAAATGCTGTTGTCTCATTTGCACTGGGACCTATTGTGCTCCCGACTCTGTATTTCGTAGGACCGAAGCTCCAAGAGGATGTCGTCAGGGATCATGAGTACAATGAATTATTTAGACTGATGAGCACTTGTGGGCGTCTCCTGAATGACAGCCAAGGCTTTGAGAGGGAGAGCCTGGAGGGAAAGCTGAACAGTGTCTCACTGCTTGTTCATCACAGTGGTGGTTCTATCTCCATAGACGAGGCTAAAATGAAAGCCCAGAAATCCATAGACACTTCCAGGAGGAACTTGTTAAGATTGGTCCTTGGAGAACAGGGTGCTGTTCCTAGGCCATGCAAGCAGCTGTTCTGGAAGATGTGCAAGATTGTTCACATGTTCTACTCTCGGACTGATGGGTTTAGCTCGCCGAAGGAAATGGTTAGTGCAGTGAATGCAGTCGTCAAGGAGCCACTTAAACTCAAAGTGAGTGATCCATATGGCTCTATTTTGTCGGGCAATTGAGTGCTTCTCCGTTCTGTTTTATCAGGGATATCAGCAACGAGCTTTATACAGGTTGATATTTCTTTTCTTTTTCTTTACGATAAGGGTTTAAATCCTAGTACCCACGATTATAGCTGCTGTGTGCTTTAAGTATAATAAATTTTACACTCTTACCATTTTTTTTTAATGTAAATGTTGGTATATATTGGTACCTGACATAATCAGAAGCAC]

[+] EMBL AK119442             [AGCCCCACACACGCACTCCCCTCGCCCTCGCCCTCGCCGTTTTGCCCGCCAATAGCAAGCGGAAGCTGGGGGAATCTGCGGTGGCTTTTTCGCCTCGTTGTGCCGTGTCATCTCCTCCTCCTCCTCCTGCCGATGATGATGCTGCTGCTGCCGAGTTCCTCCTCCTCCTGCTGCTGTCGCTGCCCCGGCGGGCAGTTCCACGGAGCTCCACCCCGCGTGATGGCGCCTCGTCGTGGGGTCACCAGAGTATATATTGAGAAGAGATTGGGAGTAGGAGGGGGAAATGCATCAAGCCTGCAAGACATGCACAGGAAGGAGCTCCAGGCAAGGACAAGGGACCAGCTCCAGACATTGGAGTTATCTACGTCTTTGTACGACACGGCGTGGGTGGCCATGGTGCCACTGCGGGGTTCCCGTCAGCATCCGAAGTTTCCCTCAGGATAGCTGGAGCCCATTACGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTCCGGTGAGCCGCGCCACGGAATCGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCTGGTTACGGTGCCGAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCCACACCAGGCCATCTGGGCGAGCGCCATGCCCCGATGAGTAGGAGGGCGCGGCGGCCGCCGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGGGTACAAGAGGATTCGGCGTGGCGGTCACAAGAGATGTTCTGTCGTCTACGTTGGCGTGTGTTCTTGCACTCAAGAGATGGAATGTTGGGCAGGAGCACATCAGGAGAGGACTAGATTTTATTGGAAGGAATTTCTCCATTGCCATGGATGAGCAGATTGCTGCTCCTGTTGGTTTCAACATCACTTTTCCTGGTATGCTTAGCCTTGCCATGGGGATGGATTTAGAATTCCCTGTCAGACAGACGGATGTTGATAGACTTCTTCACCTCCGGGAGATAGAACTGGAAAGAGAGGCTGGAGACCATTCTTATGGAAGAAAGGCATATATGGCTTATGTCACAGAAGGATTAGGAAACCTGTTGGAGTGGGATGAGATTATGATGTTCCAGAGGAAGAATGGATCATTTTTCAACTGTCCTTCCACAACTGCTGCCACATTAGTCAACCACTATAACGATAAAGCCCTCCAGTACTTAAATTGTCTGGTTAGTAAATTTGGCAGTGCAGTACCAACAGTGTATCCACTAAACATATATTGTCAGCTTTCATGGGTGGATGCACTTGAAAAGATGGGAATTTCTCAGTATTTTGTCAGTGAGATAAAGAGCATCCTAGACACAACATACGTTTCATGGTTAGAAAGAGATGAGGAAATTATGCTGGACATAACGACATGTGCAATGGCTTTTCGCCTGTTAAGGATGAATGGGTATCATGTTTCCTCAGTCGAGCTATCTCCTGTTGCTGAAGCTTCCAGTTTCCGTGAATCACTTCAAGGATATTTAAATGATAAGAAATCTCTAATCGAATTATACAAGGCTTCAAAAGTCAGTAAATCAGAAAATGAATCAATCTTAGATAGCATAGGCTCTTGGTCAGGTAGCTTATTGAAGGAAAGTGTGTGCTCTAATGGGGTGAAAAAAGCTCCAATCTTTGAAGAGATGAAGTATGCTCTTAAGTTTCCCTTCTACACCACACTGGACCGTCTAGATCACAAGAGGAACATTGAACGTTTTGATGCAAAGGATTCCCAGATGTTAAAGACGGAATACTTGCTTCCTCATGCCAATCAAGATATTCTAGCTTTGGCTGTTGAAGATTTCAGTAGTTCTCAATCTATATACCAGGATGAACTTAATTATCTTGAGTGTTGGGTGAAAGATGAAAAGCTCGATCAGCTGCCATTTGCACGCCAGAAGTTGACATATTGCTACCTTTCTGCTGCTGCTACCATATTCCCCCGTGAATTGTCTGAAGCCCGCATTGCATGGGCTAAAAATGGTGTACTGACAACTGTTGTTGATGACTTCTTTGATCTTGGGGGATCAAAAGAAGAACTAGAAAACCTCATTGCTTTAGTTGAGAAGTGGGATGGACATCAAGAGGAGTTCTACTCAGAACAAGTAAGAATAGTTTTTTCTGCTATTTATACTACAGTGAACCAGCTTGGAGCAAAGGCTTCTGCATTACAAGGCCGTGATGTTACAAAACACCTAACAGAAATATGGTTATGTCTGATGAGGTCTATGATGACCGAAGCTGAATGGCAGAGGACAAAATATGTGCCGACAATGGAAGAATATATGGCAAATGCTGTTGTCTCATTTGCACTGGGACCTATTGTGCTCCCGACTCTGTATTTCGTAGGACCGAAGCTCCAAGAGGATGTCGTCAGGGATCATGAGTACAATGAATTATTTAGACTGATGAGCACTTGTGGGCGTCTCCTGAATGACAGCCAAGGCTTTGAGAGGGAGAGCCTGGAGGGAAAGCTGAACAGTGTCTCACTGCTTGTTCATCACAGTGGTGGTTCTATCTCCATAGACGAGGCTAAAATGAAAGCCCAGAAATCCATAGACACTTCCAGGAGGAACTTGTTAAGATTGGTCCTTGGAGAACAGGGTGCTGTTCCTAGGCCATGCAAGCAGCTGTTCTGGAAGATGTGCAAGATTGTTCACATGTTCTACTCTCGGACTGATGGGTTTAGCTCGCCGAAGGAAATGGTTAGTGCAGTGAATGCAGTCGTCAAGGAGCCACTTAAACTCAAAGTGAGTGATCCATATGGCTCTATTTTGTCGGGCAATTGAGTGCTTCTCCGTTCTGTTTTATCAGGGATATCAGCAACGAGCTTTATACAGGTTGATATTTCTTTTCTTTTTCTTTACGATAAGGGTTTAAATCCTAGTACCCACGATTATAGCTGCTGTGTGCTTTAAGTATAATAAATTTTACACTCTTACCATTTTTTTTTAATGTAAATGTTGGTATATATTGGTACCTGACATAATCAGAAGCAC]
[+] EMBL CA765697             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGGCAAATGCTGTTGTCT ATTTGCACTGGGACCTATTGTGCTCCCGACTCTGTATTTCGTAGGACCGAAGCTCCAAGAGGATGTCGTCAGGGATCCTGAGTACAATGAATTATTTAGACTGATGAGCACTTGTGGGCGTCTCCTGAATGACAGCCAAGGCTTTGAGAGGGAGAACCTGGAGGGGAAGCTGAACAGTGTCTCACTGCTTGTTCATCACAGTGGTGGTTCTATCTCCATAGACGAGGCTAAAATGAAAGCCCAGAAATCCATAGACACTTCCAGGAGGAACTTGTTAAGATTGGTCCTTGGAGAACAGGGTGCTGTTCCTAGGCCATGCAAGCAGCTGTTCTGGAAGATGTGCAAGATTGTTCACATGTTCTACTCTCGGACTGATGGGTTTAGCTCGCCGAAGGAAATGGTTAGTGCAGTGAATGCAGTCGTCAAGGAGCCACTTAAACTCAAAGTGAGTGATCCATATGGCTCTACTTTGTCGGGCAATTGAGTGCTTCTCCGTTCTGTTTTATCAGGGATATCAGCAACGAGCTTTATACAGGNTGATATTTCTTTTCTTTTTCTT                                                                                                                                       ]


>consensus_1315#0 AGCCCCACACACGCACTCCCCTCGCCCTCGCCCTCGCCGTTTTGCCCGCCAATAGCAAGC GGAAGCTGGGGGAATCTGCGGTGGCTTTTTCGCCTCGTTGTGCCGTGTCATCTCCTCCTC CTCCTCCTGCCGATGATGATGCTGCTGCTGCCGAGTTCCTCCTCCTCCTGCTGCTGTCGC TGCCCCGGCGGGCAGTTCCACGGAGCTCCACCCCGCGTGATGGCGCCTCGTCGTGGGGTC ACCAGAGTATATATTGAGAAGAGATTGGGAGTAGGAGGGGGAAATGCATCAAGCCTGCAA GACATGCACAGGAAGGAGCTCCAGGCAAGGACAAGGGACCAGCTCCAGACATTGGAGTTA TCTACGTCTTTGTACGACACGGCGTGGGTGGCCATGGTGCCACTGCGGGGTTCCCGTCAG CATCCGAAGTTTCCCTCAGGATAGCTGGAGCCCATTACGAGTTCTATCGGGTAAAGCCAA TGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGG ACGGCGCGGCTGCTCCGGTGAGCCGCGCCACGGAATCGGGAGCTCCAAGTGGGCCATTTT TGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCTGGTTACGGTGCCGAACTGCG CGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGG AAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAA ATGGATGGCGCTGAAGCGCGCGACCCACACCAGGCCATCTGGGCGAGCGCCATGCCCCGA TGAGTAGGAGGGCGCGGCGGCCGCCGCAAAACCCGGGGCGCGAGCCCGGGCGGAGCGGCC GTCGGTGCAGATCTTGGGGTACAAGAGGATTCGGCGTGGCGGTCACAAGAGATGTTCTGT CGTCTACGTTGGCGTGTGTTCTTGCACTCAAGAGATGGAATGTTGGGCAGGAGCACATCA GGAGAGGACTAGATTTTATTGGAAGGAATTTCTCCATTGCCATGGATGAGCAGATTGCTG CTCCTGTTGGTTTCAACATCACTTTTCCTGGTATGCTTAGCCTTGCCATGGGGATGGATT TAGAATTCCCTGTCAGACAGACGGATGTTGATAGACTTCTTCACCTCCGGGAGATAGAAC TGGAAAGAGAGGCTGGAGACCATTCTTATGGAAGAAAGGCATATATGGCTTATGTCACAG AAGGATTAGGAAACCTGTTGGAGTGGGATGAGATTATGATGTTCCAGAGGAAGAATGGAT CATTTTTCAACTGTCCTTCCACAACTGCTGCCACATTAGTCAACCACTATAACGATAAAG CCCTCCAGTACTTAAATTGTCTGGTTAGTAAATTTGGCAGTGCAGTACCAACAGTGTATC CACTAAACATATATTGTCAGCTTTCATGGGTGGATGCACTTGAAAAGATGGGAATTTCTC AGTATTTTGTCAGTGAGATAAAGAGCATCCTAGACACAACATACGTTTCATGGTTAGAAA GAGATGAGGAAATTATGCTGGACATAACGACATGTGCAATGGCTTTTCGCCTGTTAAGGA TGAATGGGTATCATGTTTCCTCAGTCGAGCTATCTCCTGTTGCTGAAGCTTCCAGTTTCC GTGAATCACTTCAAGGATATTTAAATGATAAGAAATCTCTAATCGAATTATACAAGGCTT CAAAAGTCAGTAAATCAGAAAATGAATCAATCTTAGATAGCATAGGCTCTTGGTCAGGTA GCTTATTGAAGGAAAGTGTGTGCTCTAATGGGGTGAAAAAAGCTCCAATCTTTGAAGAGA TGAAGTATGCTCTTAAGTTTCCCTTCTACACCACACTGGACCGTCTAGATCACAAGAGGA ACATTGAACGTTTTGATGCAAAGGATTCCCAGATGTTAAAGACGGAATACTTGCTTCCTC ATGCCAATCAAGATATTCTAGCTTTGGCTGTTGAAGATTTCAGTAGTTCTCAATCTATAT ACCAGGATGAACTTAATTATCTTGAGTGTTGGGTGAAAGATGAAAAGCTCGATCAGCTGC CATTTGCACGCCAGAAGTTGACATATTGCTACCTTTCTGCTGCTGCTACCATATTCCCCC GTGAATTGTCTGAAGCCCGCATTGCATGGGCTAAAAATGGTGTACTGACAACTGTTGTTG ATGACTTCTTTGATCTTGGGGGATCAAAAGAAGAACTAGAAAACCTCATTGCTTTAGTTG AGAAGTGGGATGGACATCAAGAGGAGTTCTACTCAGAACAAGTAAGAATAGTTTTTTCTG CTATTTATACTACAGTGAACCAGCTTGGAGCAAAGGCTTCTGCATTACAAGGCCGTGATG TTACAAAACACCTAACAGAAATATGGTTATGTCTGATGAGGTCTATGATGACCGAAGCTG AATGGCAGAGGACAAAATATGTGCCGACAATGGAAGAATATATGGCAAATGCTGTTGTCT CATTTGCACTGGGACCTATTGTGCTCCCGACTCTGTATTTCGTAGGACCGAAGCTCCAAG AGGATGTCGTCAGGGATCATGAGTACAATGAATTATTTAGACTGATGAGCACTTGTGGGC GTCTCCTGAATGACAGCCAAGGCTTTGAGAGGGAGAGCCTGGAGGGAAAGCTGAACAGTG TCTCACTGCTTGTTCATCACAGTGGTGGTTCTATCTCCATAGACGAGGCTAAAATGAAAG CCCAGAAATCCATAGACACTTCCAGGAGGAACTTGTTAAGATTGGTCCTTGGAGAACAGG GTGCTGTTCCTAGGCCATGCAAGCAGCTGTTCTGGAAGATGTGCAAGATTGTTCACATGT TCTACTCTCGGACTGATGGGTTTAGCTCGCCGAAGGAAATGGTTAGTGCAGTGAATGCAG TCGTCAAGGAGCCACTTAAACTCAAAGTGAGTGATCCATATGGCTCTATTTTGTCGGGCA ATTGAGTGCTTCTCCGTTCTGTTTTATCAGGGATATCAGCAACGAGCTTTATACAGGTTG ATATTTCTTTTCTTTTTCTTTACGATAAGGGTTTAAATCCTAGTACCCACGATTATAGCT GCTGTGTGCTTTAAGTATAATAAATTTTACACTCTTACCATTTTTTTTTAATGTAAATGT TGGTATATATTGGTACCTGACATAATCAGAAGCAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)