These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13167#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2732 fasta sequence [CTTTGCCGAATTGCCGTGGCCTCGCGGCACTCCCTCCTCTCTCGCAGACTCGCAGTAGTATGCTAGGGATGAGAATATGAGATGCCTCTCCCAATTCATGGCGCCGCCGTCCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGAGGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTCGGGCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCAACCTCTCGGTTCATGAAATACGTGATCTCTTTTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCATCGGTGAAATCTGGCAGAGAGTGATACTTGTTCCAGTCAGTGGAGGCATTATAGTTGGAGTGTTTAAC-ACATTAAGAAGTTCTATAGCAACCAACTCAAATGACACTATGTCTAAGATAAAAGGTGCCTTTAGGCCATTTTTGAAAGCCATGGCAGCATCTTTTACTCTTGGAACTGGAAATTCTTTGGGGCCTGAGGGTCCAAGTGTGGAGATTGGTTCATCTATAGCCAAAGGATTTGGAAATGTGTTTAAATTGGAAGGAGGGAAAAAACTTTCTCTTGTGGCAGCTGGATCAGCAGCTGGAATCGCATCAGGTTTTAATGCTGCTGTTGCCGGGTGCTTTTTCGCCGTGGAATCTGTTTTGTGGCCTACTTCTGTTGACTCTTCATCCCTTTCCAACTCAACACCTATGGTGATACTCAGTGCAGTGATAGCGTCTGTTGTTTCAGAGATTGGTCTTGGTTCTGATCCTGCTTTTACCGTTCCAGAATATGATTTCCGCTCGCCAACAGAGATTGAAAGTATGAGGATATTTACATGACTTAATAAATGTCAGAACTTCCTCTATATCTTTTGCTGGGCATCTTCTGTGGGTTGGTGTCTACTACACTATCTAGGTGTACAGCACTTTCTATGGAGATAGTTCAAAGTTTACAAACGGCAACCGGATTACCAAAGGCTGCATCTCCTGCCTTGGGTGGCCTTATTGTTGGTCTTCTAGCCCTTGTATACCCTGAAGTTCTTTATTGGGGCTTTGAAAATGTTGATATTTTGCTGGAATCACGACCATTCACAAGTGGACTCTCAGCAGCTGTATTGGTTCAGCTCATTGGAGTAAAAGTATTGGCGACATCTTTGTGCAGGGCTTTTGGATTGGTTGGAGGCTATTATGCACCATCCCTTTTTATTGGTGCAGCTACAGGCATGGCGTATGGAAAGGTCGTGAGGTTTACATTTACTGGCCCGGATTCACTGTTCCAAATCCCGTTCCTAGATGTGGCGTCACCTCAAGCATATGGCCTGGTAGGTATGGCAGCCACGCTTGCTGGTGTATGCAAGGTGCCTCTTACATCTGTCCTCCTACTGTTTGAGCTTACTCAGGACTATCGTATAGTTTTACCTTTGCTTGGTGCTGTTGGAGTATCATCTTGGATTGCTTCTCCCCAGAGGTTCTCTAGGAGCAATAGGAGTAAGCCGGATTCCTCAGAGGTGAAATCAAGTAATTTTAAACAGGAAAAAAGTGTGCCCTCCCAGACACAAGGAGCTTCTGTGGATACAGATAAGCCTATTACCGACCTATGTAAGCTTGAAAGTTCACTGTGTGTCTATGATGCCAAGCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCACTGTACGATTTATTGCAAGAGCAACAAAATGAAGTATATTCATCTAGGAAGCGAGACCTCAAGGTAGATCAATGTAATCTGGAGCACGAGGTCAATTGGTCAAATGAAATATACGTAAAAGGTACGGTTAATAAATGCAGTATGGCGTGTGGAAGAAATTACTA] [+] EMBL AK100296 [CTTTGCCGAATTGCCGTGGCCTCGCGGCACTCCCTCCTCTCTCGCAGACTCGCAGTAGTATGCTAGGGATGAGAATATGAGATGCCTCTCCCAATTCATGGCGCCGCCGTCCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGAGGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTCGGGCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCAACCTCTCGGTTCATGAAATACGTGATCTCTTTTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCATCGGTGAAATCTGGCAGAGAGTGATACTTGTTCCAGTCAGTGGAGGCATTATAGTTGGAGTGTTTAAC ACATTAAGAAGTTCTATAGCAACCAACTCAAATGACACTATGTCTAAGATAAAAGGTGCCTTTAGGCCATTTTTGAAAGCCATGGCAGCATCTTTTACTCTTGGAACTGGAAATTCTTTGGGGCCTGAGGGTCCAAGTGTGGAGATTGGTTCATCTATAGCCAAAGGATTTGGAAATGTGTTTAAATTGGAAGGAGGGAAAAAACTTTCTCTTGTGGCAGCTGGATCAGCAGCTGGAATCGCATCAGGTTTTAATGCTGCTGTTGCCGGGTGCTTTTTCGCCGTGGAATCTGTTTTGTGGCCTACTTCTGTTGACTCTTCATCCCTTTCCAACTCAACACCTATGGTGATACTCAGTGCAGTGATAGCGTCTGTTGTTTCAGAGATTGGTCTTGGTTCTGATCCTGCTTTTACCGTTCCAGAATATGATTTCCGCTCGCCAACAGAGATTGAAAGTATGAGGATATTTACATGACTTAATAAATGTCAGAACTTCCTCTATATCTTTTGCTGGGCATCTTCTGTGGGTTGGTGTCTACTACACTATCTAGGTGTACAGCACTTTCTATGGAGATAGTTCAAAGTTTACAAACGGCAACCGGATTACCAAAGGCTGCATCTCCTGCCTTGGGTGGCCTTATTGTTGGTCTTCTAGCCCTTGTATACCCTGAAGTTCTTTATTGGGGCTTTGAAAATGTTGATATTTTGCTGGAATCACGACCATTCACAAGTGGACTCTCAGCAGCTGTATTGGTTCAGCTCATTGGAGTAAAAGTATTGGCGACATCTTTGTGCAGGGCTTTTGGATTGGTTGGAGGCTATTATGCACCATCCCTTTTTATTGGTGCAGCTACAGGCATGGCGTATGGAAAGGTCGTGAGGTTTACATTTACTGGCCCGGATTCACTGTTCCAAATCCCGTTCCTAGATGTGGCGTCACCTCAAGCATATGGCCTGGTAGGTATGGCAGCCACGCTTGCTGGTGTATGCAAGGTGCCTCTTACATCTGTCCTCCTACTGTTTGAGCTTACTCAGGACTATCGTATAGTTTTACCTTTGCTTGGTGCTGTTGGAGTATCATCTTGGATTGCTTCTCCCCAGAGGTTCTCTAGGAGCAATAGGAGTAAGCCGGATTCCTCAGAGGTGAAATCAAGTAATTTTAAACAGGAAAAAAGTGTGCCCTCCCAGACACAAGGAGCTTCTGTGGATACAGATAAGCCTATTACCGACCTATGTAAGCTTGAAAGTTCACTGTGTGTCTATGATGCCAAGCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAGTCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTTTTGGTTGGTTTTGTAGATGAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGGTATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTT ] [+] EMBL CB679684 [ TACGGATGAGAATATGAGATGCCTCTCCCAATTCATGGCGCCGCCGTCCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGAGGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTAGGGCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCGACCTCTCGGTTCATGAAATACGTGATCTCTATTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCCTCGGTGAAATCTGGGAGAGAGTGATACTTGTTCCAGTCGCTGGAGGTATTATAGCTGGAGTGTTGAACTTCATTAAGAAGTTCTATAGCAACCAACTCAAATG ] [+] EMBL CB623038 [ CTCCCAATTCATGGCGCCGCCGTCCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGATGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTCGGGCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCAACCTCTCGGTTCATGAAATACGTGATCTCTTTTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCATCGGTGAAATCTGGCAGAGAGTGATACTTGTTCCAGTCAGTGGAGGCATTATAGTTGGAGTGTTTAAC ACATTAAGAAGTTCTATAGCAACCAACTCAAATGACACTATGTCTAAGATAAAAGGTGCCTTTAGGCCATTTTTGAAAGCCATGGCAGCATCTTTTACTCTTGGAACTGGAAATTCTTTGGGGCCTGAGGGTCCAAGTGTGGAGATTGGTTCATCTATAGCCAAAGGATTTGGAAATGTGTTTAAATTGGAAGGAGGAAAAAAACTTTCTCTTGTGGCAGCTGGATCAGCAGCTGGAATCGCATCAGGTTTTAATGCTGCTGTTGCCGGGTGCTTTTTCGCCGTGGAATCTGTGTTGTGGCCTACTc ] [+] EMBL CB642971 [ TGGCGCCTTCGACCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGAGGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTCGGGCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCGACCTCTCGGTTCATGAAATACGTGATCTCTTTTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCATCCGTGAAATCTGGCAGAGAGTGATACTTGTTCCAGTCAGTGGAGGCATTATAGGTGGAGTGTTTAAC ACATTAAGAAGTTCTATAGCAACCAACTCAAATGACACTATGTCTAAGATAAAAGGTGCCTTTAGGCCATTTTTGAAAGCCATGGCAGCATCTTTTACTCTTGGAACTGGAAATTCTTTGGGGCCTGAGGGTCCAAGTGTGGAGATTGGGTCGTCTATAGCCAAAGGATTTGGATATGTGCTTAAATTGGAAGGAGGGAAAAAACTTTCTCTTGTGG ] [+] EMBL CB643010 [ TGGCCCCTCCGGCCGTGGCACCCTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCGCCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATGCGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTGGGAGGAGGA ] [-] EMBL CB623039 [ aTTTAAACAGGAAAAAAGTGTGCCCTCCCATACACAAGGAGCTTCTGTGGATACAGATAAGCCTATTACCGACCTATGTAAGCTTGAAAGTTCACTGTGTGTCTATGATGCCAAGCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAAAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTT AAGAGCGTTTAGTTTTGCACAAGTGGAT ] [+] EMBL CB683500 [ GAGCCTCTGTGGATACAGATAAGCCTATTACCGACCTATGTAAGCTTGAAAGTTCACTGTGTGTCTATGATGCCAAGCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACCAGTATTTTTAGA ] [-] EMBL CB642972 [ GCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTGGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGA ] [-] EMBL CB643011 [ AATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACTAAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGGGACTCAGAAACGTACTGTTGAAGGCCCTTTAGTTTTGCACAAGTGGATATATNCGTTTTTATTtctttaa ] [-] EMBL CB679685 [ CACT AATTTTATGC TGTGGAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCACTGTACGATTTATTGCAAGAGCAACAAAATGAAGTATATTCATCTAGGAAGCGAGACCTCAAGGTAGATCAATGTAATCTGGAGCACGAGGTCAATTGGTCAAATGAAATATACGTAAAAGGTACGGTTAATAAATGCA ] [-] EMBL CB683892 [ AAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATCCCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCACTGTACGATTTATTGCAAGAGCAACAAAATGAAGTATATTCATCTAGGAAGCGAGACCTCAAGGTAGATCAATGTAATCTGGAGCACGAGGTCAATTGGTCAAATGAAATATACGTAAGTGCTACGGTTAATAAATGCAGTATGGCGTGTGGAAGAAATTACTA] consensusID : consensus_13167#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 714 fasta sequence [CGTTTGTTATGATAATTGAGAGCAACAGATCTTTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTTTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATTTTTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACCCAGTTTTGATATTTCATCCCAAAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCCCAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCCCTGTACGATTTATTGCAAGAGCAACAAAATAAGGGATATTCATTTAAAAAAAAAAAAAAAAAAAAACATAAAGGGA] [-] EMBL CB618501 [CGTTTGTTATGATAATTGAGAGCAACAGATCTTTAATAGGCTTGGTAACTCTCAAAGATATCCAGGATTTTTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAACCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAGACATTTTTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTAGTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAAGGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAGATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACCCAGTTTTGATATTTCATCCCAAAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGGACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTACTGTTGAAGGGCCTTTAGTTTTGCCCAAGTGGATATATGCGGTTTTATTGCACCAGCGTGCTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCCCTGTACGATTTATTGCAAGAGCAACAAAATAAGGGATATTCATTTAAAAAAAAAAAAAAAAAAAAACATAAAGGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13167#0 CTTTGCCGAATTGCCGTGGCCTCGCGGCACTCCCTCCTCTCTCGCAGACTCGCAGTAGTA 60 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 TGCTAGGGATGAGAATATGAGATGCCTCTCCCAATTCATGGCGCCGCCGTCCGTGGCACC 120 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 CTGTCCCGCGCGTGTCCTCCTCGTCTCGACCCCATCCCCGCCTTCTCTCTCCCGCCGCCG 180 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 CCCGGCAGGTCGCCGCTGCGGTGGCGGGGACGGGGGCGCGCGCCTCCGGACCATCCGATG 240 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 CGGCGCGGCGACCGAGGAGGAGGACGGGGACCGGCGGGGTGAGCGGGTGGAGGCGGCCTG 300 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GGAGGAGGAGGTGGCGGCGCCCGGCCGTGACCTCGTCACGCTCGCCGCCTGCCTCGTCGG 360 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GCTCCTCAGTGGCGTCTCCGTCGTCCTCTTCAACCTCTCGGTTCATGAAATACGTGATCT 420 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 CTTTTGGGACGGCATACCATTGAGAGGCGCTTCATGGCTAAGGGAGGAGTCCATCGGTGA 480 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 AATCTGGCAGAGAGTGATACTTGTTCCAGTCAGTGGAGGCATTATAGTTGGAGTGTTTAA 540 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 CACATTAAGAAGTTCTATAGCAACCAACTCAAATGACACTATGTCTAAGATAAAAGGTGC 600 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 CTTTAGGCCATTTTTGAAAGCCATGGCAGCATCTTTTACTCTTGGAACTGGAAATTCTTT 660 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GGGGCCTGAGGGTCCAAGTGTGGAGATTGGTTCATCTATAGCCAAAGGATTTGGAAATGT 720 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GTTTAAATTGGAAGGAGGGAAAAAACTTTCTCTTGTGGCAGCTGGATCAGCAGCTGGAAT 780 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 CGCATCAGGTTTTAATGCTGCTGTTGCCGGGTGCTTTTTCGCCGTGGAATCTGTTTTGTG 840 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GCCTACTTCTGTTGACTCTTCATCCCTTTCCAACTCAACACCTATGGTGATACTCAGTGC 900 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 AGTGATAGCGTCTGTTGTTTCAGAGATTGGTCTTGGTTCTGATCCTGCTTTTACCGTTCC 960 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 AGAATATGATTTCCGCTCGCCAACAGAGATTGAAAGTATGAGGATATTTACATGACTTAA 1020 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 TAAATGTCAGAACTTCCTCTATATCTTTTGCTGGGCATCTTCTGTGGGTTGGTGTCTACT 1080 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 ACACTATCTAGGTGTACAGCACTTTCTATGGAGATAGTTCAAAGTTTACAAACGGCAACC 1140 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GGATTACCAAAGGCTGCATCTCCTGCCTTGGGTGGCCTTATTGTTGGTCTTCTAGCCCTT 1200 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GTATACCCTGAAGTTCTTTATTGGGGCTTTGAAAATGTTGATATTTTGCTGGAATCACGA 1260 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 CCATTCACAAGTGGACTCTCAGCAGCTGTATTGGTTCAGCTCATTGGAGTAAAAGTATTG 1320 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GCGACATCTTTGTGCAGGGCTTTTGGATTGGTTGGAGGCTATTATGCACCATCCCTTTTT 1380 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 ATTGGTGCAGCTACAGGCATGGCGTATGGAAAGGTCGTGAGGTTTACATTTACTGGCCCG 1440 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GATTCACTGTTCCAAATCCCGTTCCTAGATGTGGCGTCACCTCAAGCATATGGCCTGGTA 1500 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GGTATGGCAGCCACGCTTGCTGGTGTATGCAAGGTGCCTCTTACATCTGTCCTCCTACTG 1560 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 TTTGAGCTTACTCAGGACTATCGTATAGTTTTACCTTTGCTTGGTGCTGTTGGAGTATCA 1620 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 TCTTGGATTGCTTCTCCCCAGAGGTTCTCTAGGAGCAATAGGAGTAAGCCGGATTCCTCA 1680 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GAGGTGAAATCAAGTAATTTTAAACAGGAAAAAAGTGTGCCCTCCCAGACACAAGGAGCT 1740 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 TCTGTGGATACAGATAAGCCTATTACCGACCTATGTAAGCTTGAAAGTTCACTGTGTGTC 1800 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 TATGATGCCAAGCATGAGAATTTTCAGGAAAATCTTACTGTTGCAGAGGCTATGAAGACT 1860 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 AAATATATTTCTGTTTCAAAGACAACTCCAGTAGTTGAGGCACTAAATCTTATGCTTGTG 1920 consensus_13167#1 ------------------------------------------------------------ consensus_13167#0 GAAAAGCAACCGTTTGTTATGATAATTGAGAGCAACAGATCTCTAATAGGCTTGGTAACT 1980 consensus_13167#1 ----------CGTTTGTTATGATAATTGAGAGCAACAGATCTTTAATAGGCTTGGTAACT 50 ******************************** ***************** consensus_13167#0 CTCAAAGATATCCAGGATTTCTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAA 2040 consensus_13167#1 CTCAAAGATATCCAGGATTTTTGCAGAACTGCGAAAACTACCAGGGTACAGACTGAGGAA 110 ******************** *************************************** consensus_13167#0 CCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAG 2100 consensus_13167#1 CCTGTACAAACTTATGTTTGTGGAGCCGTTAAGTGTAAAATGTGGCCTGTGACACCTCAG 170 ************************************************************ consensus_13167#0 ACATCTCTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTA 2160 consensus_13167#1 ACATTTTTAACTACTGTTGAAAAGATCATGGATTCTTATGGAGTGGATCAACTTCCAGTA 230 **** * ***************************************************** consensus_13167#0 GTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAA 2220 consensus_13167#1 GTTTCAGAACATGTTGATCGTCAAGATAGAGGACTCTTGGTTGGTTTTGTAGATAAAGAA 290 ************************************************************ consensus_13167#0 GGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAG 2280 consensus_13167#1 GGCATTGCCATTGCTCGAAGAGCTGTAGCAACAAAAGATCTTTTGAGTTTTACATCTGAG 350 ************************************************************ consensus_13167#0 ATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACACAGTTCTGATATTTCATC 2340 consensus_13167#1 ATAAAGGGGGATAGATGACTTAAAAGTAGAGCTGATATTACCCAGTTTTGATATTTCATC 410 ***************************************** ***** ************ consensus_13167#0 CCAGAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGG 2400 consensus_13167#1 CCAAAACTGGGAGCTGTTCAGAATTGCCCAGCATCTGTGTACAAGTGGCCAACGCTTCGG 470 *** ******************************************************** consensus_13167#0 ACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTA 2460 consensus_13167#1 ACTCTTTTAACATTTTTACCAGGTTGTTTTGTTAACTTCAGAATGTAACTCAGAAACGTA 530 ************************************************************ consensus_13167#0 CTGTTGAAGGGCCTTTAGTTTTGCACAAGTGGATATATGCGGTTTTATTGCACCAGCGTG 2520 consensus_13167#1 CTGTTGAAGGGCCTTTAGTTTTGCCCAAGTGGATATATGCGGTTTTATTGCACCAGCGTG 590 ************************ *********************************** consensus_13167#0 CTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCACTGTACGATTTA 2580 consensus_13167#1 CTACAAGTATTTTTAGATGACATCATTTTGTCAAACTTGCGTTTTCCCCTGTACGATTTA 650 *********************************************** ************ consensus_13167#0 TTGCAAGAGCAACAAAATGAAGTATATTCATCTAGGAAGCGAGACCTCAAGGTAGATCAA 2640 consensus_13167#1 TTGCAAGAGCAACAAAATAAGGGATATTCATTTAAAAAAAAAAAAAAAAAAAAACATAAA 710 ****************** * * ******** ** ** * * ** * ** ** consensus_13167#0 TGTAATCTGGAGCACGAGGTCAATTGGTCAAATGAAATATACGTAAAAGGTACGGTTAAT 2700 consensus_13167#1 GGGA-------------------------------------------------------- 714 * * consensus_13167#0 AAATGCAGTATGGCGTGTGGAAGAAATTACTA 2732 consensus_13167#1 -------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||