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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13170#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2514 fasta sequence
[ACGGAGGCCTGTTTTGTCCACTGCACACTTCACCATTCCATTCCATGGCGCCGCCGCTCCTCGATCTCCCCTCGCACTGCCTCCTCCCTCGCCTTCGCCGCCCCACCTCCGGCCGTCTCCTCCTTCACCTCCGCCTCAAACCTCTCTCCTCCTCCTCCTACACCACCACCACCACCACCACCACCAGTAGCTCCACCTCCTCCTCGCGAGCGCCTCAAGTTCCACCTAGTCTCCATGGCCCCTCGCTCCGCCGCGGCCGCCGCCTGCCCGGCGAAACCGACGGCCTGCTCTCCTTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTCGAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGCCTCGCGTGCGCAACGTCGTCCGCCAACCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCCTCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGCTTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGGAAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTATATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTGGTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTCCTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTGTGTTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTGACCTTGTTCTACAATTACTGGCCAATGAATGAGATTTTAGAGGAAATACTCCCAGAAGGAATAATTGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGATGACCATTTACCTTACAAGAAGCTTATTGCTCAGGTGGTACTGGACAAAAACAAGCCAAAGATCCAAACTGTTGTCAATAAGATTGATGCTATTCAAAATGACTACAGAACAATGCAGCTTGAAGTCTTAGCTGGTATTGATTCCCTTGTAACTACGGTTATTGAAAGTGGTCTTCGGTTCCAAGTTGATCTTTCAACAGTTTATTGGAATTCTAGATTATCAACAGAAAGACAGAGGCTTGTTGACCATGTTTTCAAAAATTCTGATGTTGTTTGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCTGCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTGTTTATGCATCAGCTGAAGTTAGAATTGATCGTCTTGGCCTACTA-CA-TGCATGATGATACATCATTCGTGATCATCATATATCTAAATTGAAGGTCGTTCGTTTGTAGAAATTGCTTCAATAATCCAAAAGGATTTTACGATGAG-AAAGTATAAAAAAAAAGCTATGGGTGAAGCGCCAGGGACATTTAACTATTTGTCATCTATGTGTTAATGACATATAGATCCGAGTGGTAAATTAATTGAAGAGTGTCAAATAGTTAATTTTTTCCATTTGCCCCATACACAGTAGTGGATGAGTTGGCTCCTCTGTTCCGATGGAATAGCTAAAATTATCAAGAACCTACTGGTGCCTCTCTCTCTCTCTAGATAGTTCTTTTTTCTCCTTGGGCAGTGGCCTATCTAGCATTTAGCATTTAGATGGTCTAACTTACATAATTTTTTATTTTTGTTAAAGTGAGATAATATACAGTTAGTTCATCATGACATAAGGATATGATTTGCTAATTGTTACCCTTGCAAACAAATGTATTTTTTCTCTTCCTAAGAATAGTTTTTCTTTCTTTTTAACACATGTATCTTTGGCTACGTATTTCTAGGTGATCCTGGAACCACCCACAAGCTTGGAATAATATGGTTGCAAA]
[+] EMBL AK106834 [ACGGAGGCCTGTTTTGTCCACTGCACACTTCACCATTCCATTCCATGGCGCCGCCGCTCCTCGATCTCCCCTCGCACTGCCTCCTCCCTCGCCTTCGCCGCCCCACCTCCGGCCGTCTCCTCCTTCACCTCCGCCTCAAACCTCTCTCCTCCTCCTCCTACACCACCACCACCACCACCACCACCAGTAGCTCCACCTCCTCCTCGCGAGCGCCTCAAGTTCCACCTAGTCTCCATGGCCCCTCGCTCCGCCGCGGCCGCCGCCTGCCCGGCGAAACTGACGGCCTGCTCTCCTTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTCGAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGTCTCGCGTGCGCAACGTCGTCCGCCAACCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCCTCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGCTTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGGAAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTATATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTGGTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTCCTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTCTGTTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTGACCTTGTTCTACAATTACTGGCCAATGAATGAGATTTTAGAGGAAATACTCCCAGAAGGAATAATCGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGATGACCATTTACCTTACAAGAAGCTTATTGCTCAGGTGGTACTGGACAAAAACAAGCCAAAGATCCAAACTGTTGTCAATAAGATTGATGCTATTCAAAATGACTACAGAACAATGCAGCTTGAAGTCTTAGCTGGTATTGATTCCCTTGTAACTACGGTTATTGAAAGTGGTCTTCGGTTCCAAGTTGATCTTTCAACAGTTTATTGGAATTCTAGATTATCAACAGAAAGACAGAGGCTTGTTGACCATGTTTTCAAAAATTCTGATGTTGTTTGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCTGCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTGTTTATGCATCAGCTGAAGTTAGAATTGATCGTCTTGGCCTACTA CA TGCATGATGATACATCATTCGTGATCATCATATATCTAAATTGAAGGTCGTTCGTTTGTAGAAATTGCTTCAATAATCCAAAAGGATTTTACGATGAG AAAGTATAAAAAAAAAGCTATGGGTGAAGCGCCAGGGACATTTAACTATTTGTCATCTATGTGTTAATGACATATAGATCCGAGTGGTAAATTAATTGAAGAGTGTCAAATAGTTAATTTTTTCCATTTGCCCCATACACAGTAGTGGATGAGTTGGCTCCTCTGTTCCGATGGAATAGCTAAAATTATCAAGAACCTACTGGTGCCTCTCTCTCTCTCTAGATAGTTCTTTTTTCTCCTTGGGCAGTGGCCTATCTAGCATTTAGCATTTAGATGGTCTAACTTACATAATTTTTTATTTTTGTTAAAGTGAGATAATATACAGTTAGTTCATCATGACATAAGGATATGATTTGCTAATTGTTACCCTTGCAAACAAATGTATTTTTTCTCTTCCTAAGAATAGTTTTTCTTTCTTTTTAACACATGTATCTTTGGCTACGTATTTCTAGGTGATCCTGGAACCACCCACAAGCTTGGAATAATATGGTTGCAAA]
[+] EMBL CB622649 [ CGAAACCGACCTTCTGGTCTCCTTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTCGAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGCCTCGCGTGCGCAACGTCGTCCGCCAACCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCCTCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGCTTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGGAAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTATATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTGGTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTCCTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTGTGTTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTGACCTTGTTCTACAATTACTGGCCAATGAATGAGATTTTAGAGGAAATACTCCCAGAAGGAATAATTGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGATGACCATTTACCTTACAAGAAGCTTATTGCTCAGGTGGTACTGGACAAAAACAAGCCAAAGATCCAAACTGTTGTCAATAAG ]
[+] EMBL CB623967 [ CGAAACCGACGGCCTGCTCTCCTTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTCGAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGCCTCGCGTGCGCAACGTCGTCCGCCAACCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCCTCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGCTTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGGAAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTATATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTGGTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTCCTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTGTGTTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTGACCTTGTTCTACAATTACTGGCCAATGAATGAGATTTTAGAGGAAATACTCCCAGAAGGAATAATTGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGATGACCATT ]
[-] EMBL CB623968 [ CTTTCAACAGTTTATTGGAATTCTAGATTATCAACAGAAAGACAGAGGCTTGTTGACCATGTTTTCAAAAATTCTGATGTTGTTTGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCTGCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCACCAGTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTGTTTATGCATCAGCTGAAGTTAGAATTGATCGTCTTGGCCTACTA CA TGCATGATGATACATCATTCGTGATCATCATATATCTAAATTGAAGGTCGTTCGTTTGTAGAAAGTGCTTCAATAATCCAAAAGGATTTTACGATGA ]
[-] EMBL CB622650 [ AGACAGAGGCTTGTTGACCATGTTTTCAAAAATTCTGATGTTGTTTGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCTGCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCACCAGTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTGTTTATGCATCAGCTGAAGTTAGAATTGATCGTCTTGGCCTACTA CA TGCATGATGATACATCATTCGTGATCATCATATATCTAAATTGAAGGTCGTTCGTTTGTAGAAATTGCTTCAATAATCCAAAAGGATTTTACGATG ]
[+] EMBL CB685422 [ tgTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCATCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTGTTTATGCATCAGCTGAAGTTAGAATTGATCGTCTTGGCCTACTA CA TGCATGATGATACATCATTCGTG ]
[+] EMBL BM420897 [ tgTTAGTGGGTGAATGAAAATGACAGTAGTGTTTATGCATCAGCTGAAGTTAGAATTGATCGTCTTGGCCTACTACCACTGCATGATGATACATCATTCGTGATCATCATATATCTAAATTGAAGGTCGTTCGTTTGTAGAAATTGCTTCAATAATCCCAAAGGATTTTACGATGAGAAAAGTATAAAAAAAAAGCTATGGGTGAAGCGCCAGGGACATTTAACTATTTATCATCTATGTGTTAATGACATATAGATCCGAGTGGTAAATTAAaaaaa ]
consensusID : consensus_13170#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1920 fasta sequence
[GCCTGTTTTGTCCACTGCACACTTCACCATTCCATTCCATGGCGCCGCCGCTCCTCGATCTCCCCTCGCACTGCCTCCTCCCTCGCCTTCGCCGCCCCACCTCCGGCCGTCTCCTCCTTCACCTCCGCCTCAAACCTCTCTCCTCCTCCTCCTACACCACCACCACCACCACCACCACCAGTAGCTCCACCTCCTCCTCGCGAGCGCCTCAAGTTCCACCTAGTCTCCATGGCCCCTCGCTCCGCCTCGGCCGCCGCCTGCCCGGCGAAACTGACGGCCTGCTCTCCTTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTCGAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGCCTCGCGTGCGCAACGTCGTCCGCCAACCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCCTCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGCTTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGGAAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTATATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTGGTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTCCTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTGTGTTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTGACCTTGTTCTACAATTACTGGCCAATGAATGAGGTAACACTGCCTTTGCAAATACCGGATACAGACCAAAAGTTCAGTCTGTACAGATTTTAGAGGAAATACTCCCAGAAGGAATAATCGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGATGACCATTTACCTTACAAGAAGCTTATTGCTCAGGTGGTACTGGACAAAAACAAGCCAAAGATCCAAACTGTTGTCAATAAGATTGATGCTATTCAAAATGACTACAGAACAATGCAGCTTGAAGTCTTAGCTGGTATTGATTCCCTTGTAACTACGGTTATTGAAAGTGGTCTTCGGTTCCAAGTTGATCTTTCAACAGTTTATTGGAATTCTAGATTATCAACAGAAAGACAGAGGCTTGTTGACCATGTTTTCAAAAATTCTGATGTTGTTTGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCTGCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTG]
[+] EMBL AK067433 [GCCTGTTTTGTCCACTGCACACTTCACCATTCCATTCCATGGCGCCGCCGCTCCTCGATCTCCCCTCGCACTGCCTCCTCCCTCGCCTTCGCCGCCCCACCTCCGGCCGTCTCCTCCTTCACCTCCGCCTCAAACCTCTCTCCTCCTCCTCCTACACCACCACCACCACCACCACCACCAGTAGCTCCACCTCCTCCTCGCGAGCGCCTCAAGTTCCACCTAGTCTCCATGGCCCCTCGCTCCGCCTCGGCCGCCGCCTGCCCGGCGAAACTGACGGCCTGCTCTCCTTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTCGAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGCCTCGCGTGCGCAACGTCGTCCGCCAACCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCCTCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGCTTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGGAAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTATATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTGGTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTCCTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTGTGTTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTGACCTTGTTCTACAATTACTGGCCAATGAATGAGGTAACACTGCCTTTGCAAATACCGGATACAGACCAAAAGTTCAGTCTGTACAGATTTTAGAGGAAATACTCCCAGAAGGAATAATCGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGATGACCATTTACCTTACAAGAAGCTTATTGCTCAGGTGGTACTGGACAAAAACAAGCCAAAGATCCAAACTGTTGTCAATAAGATTGATGCTATTCAAAATGACTACAGAACAATGCAGCTTGAAGTCTTAGCTGGTATTGATTCCCTTGTAACTACGGTTATTGAAAGTGGTCTTCGGTTCCAAGTTGATCTTTCAACAGTTTATTGGAATTCTAGATTATCAACAGAAAGACAGAGGCTTGTTGACCATGTTTTCAAAAATTCTGATGTTGTTTGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCTGCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTG]
consensusID : consensus_13170#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1735 fasta sequence
[GCCTGTTTTGTCCACTGCACACTTCACCATTCCATTCCATGGCGCCGCCGCTCCTCGATCTCCCCTCGCACTGCCTCCTCCCTCGCCTTCGCCGCCCCACCTCCGGCCGTCTCCTCCTTCACCTCCGCCTCAAACCTCTCTCCTCCTCCTCCTACACCACCACCACCACCACCACCACCAGTAGCTCCACCTCCTCCTCGCGAGCGCCTCAAGTTCCACCTAGTCTCCATGGCCCCTCGCTCCGCCGCGGCCGCCGCCTGCCCGGCGAAACTGACGGCCTGCTCTCCTTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTCGAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGCCTCGCGTGCGCAACGTCGTCCGCCAACCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCCTCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGCTTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGGAAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTATATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTGGTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTCCTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTGTGTTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTGACCTTGTTCTACAATTACTGGCCAATGAATGAGGTAACACTGCCTTTGCAAATACCGGATACAGACCAAAAGTTCAGTCTGTACAGATTTTAGAGGAAATACTCCCAGAAGGAATAATCGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGATGACCATTTACCTTACAAGAAGCTTATTGCTCAGGTGGTACTGGACAAAAACAAGCCAAAGATCCAAACTGTTGTCAATAAGATTGATGCTATTCAAAATGACTACAGAACAATGCAGCTTGAAGTCTTAGCTGGTATTGATTCCCTTGTAACTACGGTTATTGAAAGTGGTCTTCGGTTCCAAGTTGATCTTTCAACAGTGTATGTTCTATCCTCTCTTGGCTCATATTTGTCACACAACATTTCTGATTTATTGTGATTGCAAAATAACAAAACAAAATGATTTCATTATTTGCAGGATAAAATCCTTACCTACATATTTGTAGTTTGTGGTTGTGCTATGTCTATAAAGAATTCTATTGTTTGCACTTGAACCATAGTTTAATTGCTATCATTAACCTCTTTTCCAGTAACAAATCTTCACCAAAAGATTTCCCTAGTGTTTCTTATTCTATACATGTAATAAAGATATAGTCAAATCTCAATTCAACATTCACATTCTTAAGATGGCTTTGTAATAGAAAATTTTGAAAATTTTTAGTTGAATGTTTTGAAAAGTTCATAATAGGACTATTGCTTTTTATGAATAGGTGTATGGGAATAAATGGTCCCTCGTGTAATCCATAAGATTAGCTACTGTGCTATATGATCTCTTTTTCTCAATCTAGGGTTGCTT]
[+] EMBL AK101833 [GCCTGTTTTGTCCACTGCACACTTCACCATTCCATTCCATGGCGCCGCCGCTCCTCGATCTCCCCTCGCACTGCCTCCTCCCTCGCCTTCGCCGCCCCACCTCCGGCCGTCTCCTCCTTCACCTCCGCCTCAAACCTCTCTCCTCCTCCTCCTACACCACCACCACCACCACCACCACCAGTAGCTCCACCTCCTCCTCGCGAGCGCCTCAAGTTCCACCTAGTCTCCATGGCCCCTCGCTCCGCCGCGGCCGCCGCCTGCCCGGCGAAACTGACGGCCTGCTCTCCTTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTCGAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGCCTCGCGTGCGCAACGTCGTCCGCCAACCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCCTCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGCTTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGGAAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTATATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTGGTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTCCTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTGTGTTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTGACCTTGTTCTACAATTACTGGCCAATGAATGAGGTAACACTGCCTTTGCAAATACCGGATACAGACCAAAAGTTCAGTCTGTACAGATTTTAGAGGAAATACTCCCAGAAGGAATAATCGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGATGACCATTTACCTTACAAGAAGCTTATTGCTCAGGTGGTACTGGACAAAAACAAGCCAAAGATCCAAACTGTTGTCAATAAGATTGATGCTATTCAAAATGACTACAGAACAATGCAGCTTGAAGTCTTAGCTGGTATTGATTCCCTTGTAACTACGGTTATTGAAAGTGGTCTTCGGTTCCAAGTTGATCTTTCAACAGTGTATGTTCTATCCTCTCTTGGCTCATATTTGTCACACAACATTTCTGATTTATTGTGATTGCAAAATAACAAAACAAAATGATTTCATTATTTGCAGGATAAAATCCTTACCTACATATTTGTAGTTTGTGGTTGTGCTATGTCTATAAAGAATTCTATTGTTTGCACTTGAACCATAGTTTAATTGCTATCATTAACCTCTTTTCCAGTAACAAATCTTCACCAAAAGATTTCCCTAGTGTTTCTTATTCTATACATGTAATAAAGATATAGTCAAATCTCAATTCAACATTCACATTCTTAAGATGGCTTTGTAATAGAAAATTTTGAAAATTTTTAGTTGAATGTTTTGAAAAGTTCATAATAGGACTATTGCTTTTTATGAATAGGTGTATGGGAATAAATGGTCCCTCGTGTAATCCATAAGATTAGCTACTGTGCTATATGATCTCTTTTTCTCAATCTAGGGTTGCTT]
consensusID : consensus_13170#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 864 fasta sequence
[CACCCCTGGTTCTGGAGTAGTTCACAGTAACTATTACATTTTTAATTTCATCTTCTCTTAAGCTTCACAATATTTACTTGATTATAACCTTTTCCGTAGCGAGTGAAAGATCAATTGCTACCACATCCTTTATGCAGGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCCGCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGGCGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCACCAGTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAANTACATTGCATGTTAAGAGGACCGGCCTATAACAAAATTAACCATCNTTGTATATTTCTTTAGTGGGTGAATGAAAAATGACAGGAGTGTTTATGCATCAGCTTGAAGNTAGAAATTGGATCGNCCTGGGCCTACTACATGCNTGATGATACATCANTTCGNGATCATCATATATCTTAAATTGGAAGNTCGTTCGTTTGTANAAAATTGGCTTCATTANTCCCA]
[+] EMBL CA766049 [CACCCCTGGTTCTGGAGTAGTTCACAGTAACTATTACATTTTTAATTTCATCTTCTCTTAAGCTTCACAATATTTACTTGATTATAACCTTTTCCGTAGCGAGTGAAAGATCAATTGCTACCACATCCTTTATGCAGGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCCGCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGGCGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCACCAGTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAANTACATTGCATGTTAAGAGGACCGGCCTATAACAAAATTAACCATCNTTGTATATTTCTTTAGTGGGTGAATGAAAAATGACAGGAGTGTTTATGCATCAGCTTGAAGNTAGAAATTGGATCGNCCTGGGCCTACTACATGCNTGATGATACATCANTTCGNGATCATCATATATCTTAAATTGGAAGNTCGTTCGTTTGTANAAAATTGGCTTCATTANTCCCA]
consensusID : consensus_13170#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 716 fasta sequence
[AAAACTCGAGACCCTCGTGCCGAATTCGGCACGAGGGGAATGACTTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTGTTTATGCATCAGCTGAAGTTAGAATTGATCGTCTTGGCCTACTACAGGCATGATGATACATCATTCGTGATCATCATATATCTAAATTGAAGGTCGTTCGTTTGTAGAAATTGCTTCAAGGATCCAAAAGGATTTTACGATGAGAAAGTTCCTAAAAGGA]
[-] EMBL CB685423 [AAAACTCGAGACCCTCGTGCCGAATTCGGCACGAGGGGAATGACTTAAACCCCACTGCAGTGGAGTACCTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGACGCTAGAAGGTTTATCAGTTCAATATACTCAAGCCAACATGTGCATCCAGTCACACAAGTAGTAATGAATTTGCCCAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGAATCTCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTGTTTATGCATCAGCTGAAGTTAGAATTGATCGTCTTGGCCTACTACAGGCATGATGATACATCATTCGTGATCATCATATATCTAAATTGAAGGTCGTTCGTTTGTAGAAATTGCTTCAAGGATCCAAAAGGATTTTACGATGAGAAAGTTCCTAAAAGGA]
consensusID : consensus_13170#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 448 fasta sequence
[TCCTAATGGCCCATATGCCCCCGATGTTTTTTGNATGGGAATTTTGACAGTTAGGCTAATCACAGGACCAATTAATTATTTTATGATTTCACTGTTTCCCCAGATGTGTTCAGAGGAATCCNCATGGAACCACCATTTGGCTGTNCCTTCTTGTGTAATNCCAAATATACNCGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTGTTTATGCAAAAAA]
[+] EMBL AU056071 [TCCTAATGGCCCATATGCCCCCGATGTTTTTTGNATGGGAATTTTGACAGTTAGGCTAATCACAGGACCAATTAATTATTTTATGATTTCACTGTTTCCCCAGATGTGTTCAGAGGAATCCNCATGGAACCACCATTTGGCTGTNCCTTCTTGTGTAATNCCAAATATACNCGTGTATGGATTCTCCAAAGCAGAAGATCCTGAATATGACTTCCATGAGAGGATAAATTTGACGCTGGGTGAGAACGTGTCCGATGTTGAAATGCATAGAGTGCGGCTCGTTGCTCCTGGAAAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAATTACATTGCATGTTAAGAGGACGGCCTATAACAAATTAACCATCTTGTATATTCTTTAGTGGGTGAATGAAAATGACAGTAGTGTTTATGCAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 -----------------------------------------------ACGGAGGCCTGTT 13
consensus_13170#1 GCCTGTTTTGTCCACTGCACACTTCACCATTCCATTCCATGGCGCCGCCGCTCCTCGATC 60
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 TTGTCCACTGCACACTTCACCATTCCATTCCATGGCGCCGCCGCTCCTCGATCTCCCCTC 73
consensus_13170#1 TCCCCTCGCACTGCCTCCTCCCTCGCCTTCGCCGCCCCACCTCCGGCCGTCTCCTCCTTC 120
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GCACTGCCTCCTCCCTCGCCTTCGCCGCCCCACCTCCGGCCGTCTCCTCCTTCACCTCCG 133
consensus_13170#1 ACCTCCGCCTCAAACCTCTCTCCTCCTCCTCCTACACCACCACCACCACCACCACCACCA 180
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 CCTCAAACCTCTCTCCTCCTCCTCCTACACCACCACCACCACCACCACCACCAGTAGCTC 193
consensus_13170#1 GTAGCTCCACCTCCTCCTCGCGAGCGCCTCAAGTTCCACCTAGTCTCCATGGCCCCTCGC 240
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 CACCTCCTCCTCGCGAGCGCCTCAAGTTCCACCTAGTCTCCATGGCCCCTCGCTCCGCCG 253
consensus_13170#1 TCCGCCTCGGCCGCCGCCTGCCCGGCGAAACTGACGGCCTGCTCTCCTTCGCCCGCATCT 300
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 CGGCCGCCGCCTGCCCGGCGAAACCGACGGCCTGCTCTCCTTCGCCCGCATCTTCGATCT 313
consensus_13170#1 TCGATCTCGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTCGAGCGTCGCCTCC 360
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 CGCCGCCCTCCGCGTCCCGGCCGCCGCCTGTGCGCCCCTCGAGCGTCGCCTCCGTGGCCA 373
consensus_13170#1 GTGGCCACCTCCTCAACTGGCCTCGCGTGCGCAACGTCGTCCGCCAACCCGGCGACGACG 420
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 CCTCCTCAACTGGCCTCGCGTGCGCAACGTCGTCCGCCAACCCGGCGACGACGGCGGCCT 433
consensus_13170#1 GCGGCCTCCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCCTCCCTGCCAACTG 480
consensus_13170#2 -----------------------------GCCTGTTTTGTCCACTGCACACTTCACCATT 31
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 CCTCTTCCCCGTTCCCCATCCAAGCCTCGCCACTCCCTCCTCCCTGCCAACTGCGGTGGC 493
consensus_13170#1 CGGTGGCTCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGCTTCGTGCAATTCC 540
consensus_13170#2 CCATTCCATGGCGCCGCCGCTCCTCGATCTCCCCTCGCACTGCCTCCTCCCTCGCCTTCG 91
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 TCGCCGAGAGAAGCTGGCCCGCGAGTTCAACGCCCGAGGCTTCGTGCAATTCCCCAACCT 553
consensus_13170#1 CCAACCTTGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGGAAGAAGGATGAAG 600
consensus_13170#2 CCGCCCCACCTCCGGCCGTCTCCTCCTTCACCTCCGCCTCAAACCTCTCTCCTCCTCCTC 151
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 TGCCAAGATGTCGCGGCCCCCCGCGAGGAAACGGAAGGGGAAGAAGGATGAAGGAGGCGG 613
consensus_13170#1 GAGGCGGCGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTATATGTGGTGGAGG 660
consensus_13170#2 CTACACCACCACCACCACCACCACCACCAGTAGCTCCACCTCCTCCTCGCGAGCGCCTCA 211
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 CGAGGCTGCGGCTACGGCAAGGGATACTAAAGACAAAGTATATGTGGTGGAGGTGATCGG 673
consensus_13170#1 TGATCGGAGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTGGTCGGGGAGGAGG 720
consensus_13170#2 AGTTCCACCTAGTCTCCATGGCCCCTCGCTCCGCCGCGGCCGCCGCCTGCCCGGCGAAAC 271
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 AGAGAGAAAAGAGGAGCACGGCGACGAGTGGATGGGGTTGGTCGGGGAGGAGGGGTTCGG 733
consensus_13170#1 GGTTCGGGAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTCCTGGACGAGAACT 780
consensus_13170#2 TGACGGCCTGCTCTCCTTCGCCCGCATCTTCGATCTCGCCGCCCTCCGCGTCCCGGCCGC 331
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GAGGATCACGTGGAGAGGAGGTCCCACCCGGTTGCTGCTCCTGGACGAGAACTATGCCAA 793
consensus_13170#1 ATGCCAACAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTGTGTTGGACCATGAAA 840
consensus_13170#2 CGCCTGTGCGCCCCTCGAGCGTCGCCTCCGTGGCCACCTCCTCAACTGGCCTCGCGTGCG 391
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 CAAGAGGGTTGATGACCTCCCGGAGGCTGTCAAGGTTGTGTTGGACCATGAAACTAACAA 853
consensus_13170#1 CTAACAAGGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTGACCTTGTTCTACA 900
consensus_13170#2 CAACGTCGTCCGCCAACCCGGCGACGACGGCGGCCTCCTCTTCCCCGTTCCCCATCCAAG 451
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GGATGGATCTTCATCCTACGAGCTTGTGCAATGCCAATTGACCTTGTTCTACAATTACTG 913
consensus_13170#1 ATTACTGGCCAATGAATGAGGTAACACTGCCTTTGCAAATACCGGATACAGACCAAAAGT 960
consensus_13170#2 CCTCGCCACTCCCTCCTCCCTGCCAACTGCGGTGGCTCGCCGAGAGAAGCTGGCCCGCGA 511
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GCCAATGAATGAGATTTTAGAGGAAATACTCCCAGAAGGAATAATTGTTCCTACAGGGTT 973
consensus_13170#1 TCAGTCTGTACAGATTTTAGAGGAAATACTCCCAGAAGGAATAATCGTTCCTACAGGGTT 1020
consensus_13170#2 GTTCAACGCCCGAGGCTTCGTGCAATTCCCCAACCTTGCCAAGATGTCGCGGCCCCCCGC 571
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 TGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGATGACCATTTACCTTACAAGAA 1033
consensus_13170#1 TGAGACAGTAGGGCATATTGCACACTTGAACTTGAGGGATGACCATTTACCTTACAAGAA 1080
consensus_13170#2 GAGGAAACGGAAGGGGAAGAAGGATGAAGGAGGCGGCGAGGCTGCGGCTACGGCAAGGGA 631
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GCTTATTGCTCAGGTGGTACTGGACAAAAACAAGCCAAAGATCCAAACTGTTGTCAATAA 1093
consensus_13170#1 GCTTATTGCTCAGGTGGTACTGGACAAAAACAAGCCAAAGATCCAAACTGTTGTCAATAA 1140
consensus_13170#2 TACTAAAGACAAAGTATATGTGGTGGAGGTGATCGGAGAGAGAAAAGAGGAGCACGGCGA 691
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GATTGATGCTATTCAAAATGACTACAGAACAATGCAGCTTGAAGTCTTAGCTGGTATTGA 1153
consensus_13170#1 GATTGATGCTATTCAAAATGACTACAGAACAATGCAGCTTGAAGTCTTAGCTGGTATTGA 1200
consensus_13170#2 CGAGTGGATGGGGTTGGTCGGGGAGGAGGGGTTCGGGAGGATCACGTGGAGAGGAGGTCC 751
consensus_13170#3 CACCCCTGGTTCTGGAGTAGTTCACAGTAACTATTACATTTTTAATTTCATCTTCTCTTA 60
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 TTCCCTTGTAACTACGGTTATTGAAAGTGGT--CTTCGGTTCCAAGTTGATCTTTCAACA 1211
consensus_13170#1 TTCCCTTGTAACTACGGTTATTGAAAGTGGT--CTTCGGTTCCAAGTTGATCTTTCAACA 1258
consensus_13170#2 CACCCGGTTGCTGCTCCTGGACGAGAACTATGCCAACAAGAGGGTTGATGACCTCCCGGA 811
consensus_13170#3 AGCTTCACAATATTTACTTGATTATAACCTTTTCCGTAGCGAGTGAAAGATCAATTG--C 118
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GTTTATTGGAATTCTAGATTATCAACAGAAAGACAGAGGCTTGTTGACCAT-GTTTT--C 1268
consensus_13170#1 GTTTATTGGAATTCTAGATTATCAACAGAAAGACAGAGGCTTGTTGACCAT-GTTTT--C 1315
consensus_13170#2 GGCTGTCAAGGTTGTGTTGGACCATGAAACTAACAAGGATGGATCTTCATCCTACGAGCT 871
consensus_13170#3 TACCACATCCTTTATGCAGGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCC 178
consensus_13170#4 ---------------------------------------------AAAACT-CGAGACCC 14
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 AAAAATTCTGATGTTGTTTGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCT 1328
consensus_13170#1 AAAAATTCTGATGTTGTTTGTGATGTGTTCTCTGGTGTTGGTCCAATAGCAATATCAGCT 1375
consensus_13170#2 TGTGCAATGCCAATTGACCTTGTTCTACAATTACTGGCCAATGAATGAGGTAACACTGCC 931
consensus_13170#3 GCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAG---TAC 235
consensus_13170#4 TCGTGCCGAATTCGGCACG---AGGGGAATGACTTAAACCCCACTGCAGTGGAG---TAC 68
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAG---TAC 1385
consensus_13170#1 GCAAGAAAGGTCAAATATGTCTATGCGAATGACCTAAACCCCACTGCAGTGGAG---TAC 1432
consensus_13170#2 TTTGCAAATACCGGATACAGACCAAAAGTTCAGTCTGTACAGATTTTAGAGGAAATACTC 991
consensus_13170#3 CTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGGC 295
consensus_13170#4 CTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGAC 128
consensus_13170#5 -----------------------------------------------TCCTAA--TGGCC 11
consensus_13170#0 CTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGAC 1445
consensus_13170#1 CTTGAGAGAAACATTGTTCTTAACAAGCTCGAGAGAAAAATCGAGGTTTTTAACATGGAC 1492
consensus_13170#2 CCAGAAGGAATAATCGTTCCTACAGGGTTTGAGACAGTAGGGCATATTGCACACTTGAAC 1051
* * ** *
consensus_13170#3 GCTAGAA--GGTTTATCAGTTCAATATACTCAAGCCAA-CATGTGCATCCAGTCACACAA 352
consensus_13170#4 GCTAGAA--GGTTTATCAGTTCAATATACTCAAGCCAA-CATGTGCATCCAGTCACACAA 185
consensus_13170#5 CATATGC--CCCCGATGTTTTTTGNATGGGAATTTTGA-CA-GTTAGGCTAATCACA--- 64
consensus_13170#0 GCTAGAA--GGTTTATCAGTTCAATATACTCAAGCCAA-CATGTGCATCCAGTCACACAA 1502
consensus_13170#1 GCTAGAA--GGTTTATCAGTTCAATATACTCAAGCCAA-CATGTGCATCCAGTCACACAA 1549
consensus_13170#2 TTGAGGGATGACCATTTACCTTACAAGAAGCTTATTGCTCAGGTGGTACTGGACAAAAAC 1111
* * * * ** ** * ** *
consensus_13170#3 GTAGTAA----TGAATTTGCC--CAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGA 406
consensus_13170#4 GTAGTAA----TGAATTTGCC--CAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGA 239
consensus_13170#5 GGACCAA----TTAATT-ATT--TTATGATTTCACTGTTTCCCCAGATGTGTTCAGAGGA 117
consensus_13170#0 GTAGTAA----TGAATTTGCC--CAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGA 1556
consensus_13170#1 GTAGTAA----TGAATTTGCC--CAATGATGCTGCAGAATTTTTAGATGTGTTCAGAGGA 1603
consensus_13170#2 AAGCCAAAGATCCAAACTGTTGTCAATAAGATTGATGCTATTCAAAATGACTACAGAACA 1171
** ** ** * * * *** * **** *
consensus_13170#3 ATC-TCATGGAACCACCAGTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTA 465
consensus_13170#4 ATC-TCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTA 298
consensus_13170#5 ATCCNCATGGAACCACCATTTGGCTGTNCCTTCTTGTGTAATNCCAAATATACNCGTGTA 177
consensus_13170#0 ATC-TCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTA 1615
consensus_13170#1 ATC-TCATGGAACCACCATTTGGCTGTGCCTTCTTGTGTAATGCCAAATATACACGTGTA 1662
consensus_13170#2 ATGCAGCTTGAAGTCTTAGCTGGTATTGATTCCCT-TGTAACTACGGTTATTGAAAGTGG 1230
** * *** * *** * * * * ***** * ***
consensus_13170#3 TGGATTCTCCAAAGCAGAAGATCCTG-AATATGACTTCCATGAGAGGATAAATTTGACGC 524
consensus_13170#4 TGGATTCTCCAAAGCAGAAGATCCTG-AATATGACTTCCATGAGAGGATAAATTTGACGC 357
consensus_13170#5 TGGATTCTCCAAAGCAGAAGATCCTG-AATATGACTTCCATGAGAGGATAAATTTGACGC 236
consensus_13170#0 TGGATTCTCCAAAGCAGAAGATCCTG-AATATGACTTCCATGAGAGGATAAATTTGACGC 1674
consensus_13170#1 TGGATTCTCCAAAGCAGAAGATCCTG-AATATGACTTCCATGAGAGGATAAATTTGACGC 1721
consensus_13170#2 TCTTCGGTTCCAAGTTGATCTTTCAACAGTGTATGTTCTATCCTCTCTTGGCTCATAT-T 1289
* * * *** ** * * * * * *** ** * * *
consensus_13170#3 TGGGTGAGAACGTGTCCGAT--GTTGAAAT-GCATAG-AGTGCGGCTCGTTGCTCCTGGA 580
consensus_13170#4 TGGGTGAGAACGTGTCCGAT--GTTGAAAT-GCATAG-AGTGCGGCTCGTTGCTCCTGGA 413
consensus_13170#5 TGGGTGAGAACGTGTCCGAT--GTTGAAAT-GCATAG-AGTGCGGCTCGTTGCTCCTGGA 292
consensus_13170#0 TGGGTGAGAACGTGTCCGAT--GTTGAAAT-GCATAG-AGTGCGGCTCGTTGCTCCTGGA 1730
consensus_13170#1 TGGGTGAGAACGTGTCCGAT--GTTGAAAT-GCATAG-AGTGCGGCTCGTTGCTCCTGGA 1777
consensus_13170#2 TGTCACACAACATTTCTGATTTATTGTGATTGCAAAATAACAAAACAAAATGATTTCATT 1349
** * *** * ** *** *** ** *** * * * ** *
consensus_13170#3 AAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAAN 640
consensus_13170#4 AAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAAT 473
consensus_13170#5 AAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAAT 352
consensus_13170#0 AAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAAT 1790
consensus_13170#1 AAATGGATGCTTTGTGCATCATTTACCCTTCCAGTATCTGTGGCGTTTGCAAAGCCAAAT 1837
consensus_13170#2 ATTTGCAGGATAAAATCCTTACCTACATATTTGTAGTTTGTGGTTGTGCTATGTCTATAA 1409
* ** * * * * * * *** * * ***** * * * * *
consensus_13170#3 TACATTGCATGTTAAGAGGACCGGCCTATAACAAAATTA--ACCATCNTTGTATATTTCT 698
consensus_13170#4 TACATTGCATGTTAAGAGGAC-GGCCTATAACAAA-TTA--ACCATCTT-GTATATT-CT 527
consensus_13170#5 TACATTGCATGTTAAGAGGAC-GGCCTATAACAAA-TTA--ACCATCTT-GTATATT-CT 406
consensus_13170#0 TACATTGCATGTTAAGAGGAC-GGCCTATAACAAA-TTA--ACCATCTT-GTATATT-CT 1844
consensus_13170#1 TACATTGCATGTTAAGAGGAC-GGCCTATAACAAA-TTA--ACCATCTT-GTATATT-CT 1891
consensus_13170#2 AGAATTCTATTGTTTGCACTT-GAACCATAGTTTAATTGCTATCATTAACCTCTTTTCCA 1468
*** ** * * * * *** * ** * *** * * ** *
consensus_13170#3 TTAGTGGGTG---AATGAAAAATGACAGGAGTGTTT--------ATGCATCAGCTTGAAG 747
consensus_13170#4 TTAGTGGGTG---AATGAAAA-TGACAGTAGTGTTT--------ATGCATCAGCT-GAAG 574
consensus_13170#5 TTAGTGGGTG---AATGAAAA-TGACAGTAGTGTTT--------ATGCAAAAAA------ 448
consensus_13170#0 TTAGTGGGTG---AATGAAAA-TGACAGTAGTGTTT--------ATGCATCAGCT-GAAG 1891
consensus_13170#1 TTAGTGGGTG---AATGAAAA-TGACAGTAGTG--------------------------- 1920
consensus_13170#2 GTAACAAATCTTCACCAAAAGATTTCCCTAGTGTTTCTTATTCTATACATGTAATAAAGA 1528
** * * *** * * ****
consensus_13170#3 NTAGAAATTGGATCGNCCTGGGCCTACTACATGCNTGATGATACATCANTTCGNGATCAT 807
consensus_13170#4 TTAGAA--TTGATCGTCTTGG-CCTACTACAGGCATGATGATACATCATT-CGTGATCAT 630
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 TTAGAA--TTGATCGTCTTGG-CCTACTACATGCATGATGATACATCATT-CGTGATCAT 1947
consensus_13170#1 ------------------------------------------------------------
consensus_13170#2 TATAGTCAAATCTCAATTCAACATTCACATTCTTAAGATGGCTTTGTAAT-AGAAAATTT 1587
consensus_13170#3 CATATATCTTAAATTGGAAGNTC--GTTCGTTTGTANAAAATTGGCTTCATTANTCCCA- 864
consensus_13170#4 CATATATCT-AAATTG-AAGGTC--GTTCGTTTGTAGAAATT--GCTTCAAGGATCCAAA 684
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 CATATATCT-AAATTG-AAGGTC--GTTCGTTTGTAGAAATT--GCTTCAATAATCCAAA 2001
consensus_13170#1 ------------------------------------------------------------
consensus_13170#2 TGAAAATTTTTAGTTGAATGTTTTGAAAAGTTCATAATAGGACTATTGCTTTTTATGAAT 1647
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 AGGATTTTACGATGAGAAAGTTCCTAAAAGGA---------------------------- 716
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 AGGATTTTACGATGAGAAAGTATAAAAAAAAAGCTATGGGTGAAGCGCCAGGGACATTTA 2061
consensus_13170#1 ------------------------------------------------------------
consensus_13170#2 AGGTGTATGGGAATAAATGGTCCCTCGTGTAATCCATAAGATTAGCTACTGTGCTATATG 1707
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 ACTATTTGTCATCTATGTGTTAATGACATATAGATCCGAGTGGTAAATTAATTGAAGAGT 2121
consensus_13170#1 ------------------------------------------------------------
consensus_13170#2 ATCTCTTTTTCTCAATCTAGGGTTGCTT-------------------------------- 1735
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GTCAAATAGTTAATTTTTTCCATTTGCCCCATACACAGTAGTGGATGAGTTGGCTCCTCT 2181
consensus_13170#1 ------------------------------------------------------------
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GTTCCGATGGAATAGCTAAAATTATCAAGAACCTACTGGTGCCTCTCTCTCTCTCTAGAT 2241
consensus_13170#1 ------------------------------------------------------------
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 AGTTCTTTTTTCTCCTTGGGCAGTGGCCTATCTAGCATTTAGCATTTAGATGGTCTAACT 2301
consensus_13170#1 ------------------------------------------------------------
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 TACATAATTTTTTATTTTTGTTAAAGTGAGATAATATACAGTTAGTTCATCATGACATAA 2361
consensus_13170#1 ------------------------------------------------------------
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 GGATATGATTTGCTAATTGTTACCCTTGCAAACAAATGTATTTTTTCTCTTCCTAAGAAT 2421
consensus_13170#1 ------------------------------------------------------------
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ------------------------------------------------------------
consensus_13170#4 ------------------------------------------------------------
consensus_13170#5 ------------------------------------------------------------
consensus_13170#0 AGTTTTTCTTTCTTTTTAACACATGTATCTTTGGCTACGTATTTCTAGGTGATCCTGGAA 2481
consensus_13170#1 ------------------------------------------------------------
consensus_13170#2 ------------------------------------------------------------
consensus_13170#3 ---------------------------------
consensus_13170#4 ---------------------------------
consensus_13170#5 ---------------------------------
consensus_13170#0 CCACCCACAAGCTTGGAATAATATGGTTGCAAA 2514
consensus_13170#1 ---------------------------------
consensus_13170#2 ---------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||