These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13183#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2545 fasta sequence [GGGAAAAAAAAAAGAAAGAAAGAACGGAAGAGAAGGCCGCCGGCCGTCAGAACAGGAACGGGAACGGAACGGTCAGCGGCCCTTTCAACGGGAGACCCCGGCAGCACGGCATCCGTTCCCGTTCCCTTTTATTCAGTCCCGTCCTTTCCATTGACCGTCCACATCCTCCCCCCTCCTCCACCCGCTGCCACACCATCCGTCGCCGTCGCCGTCGCCCCGCTCGCCCTCGGGTTGACTTGACTCCTCCTCCTCCTCGTCCTCTCTCTGTAGTTGTACATACACCTCCCCGCCCTCCGCCTCACCACTCCATTTCCGTCTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTTCTTTACCACGG-CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGC---GGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAATGAGGAACAATGTGACGGTAAGACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGAATATGATAAGGAGTGTTCCCAGGCTTACATAAGCACACGACAGAGTGCAGTAGATGAGAACCTTGGGTCTCTTCGTATTGACAAGCTCAGCATGGAAGAACTTTTGAGCACCAACTGGACCAAGTTAAGTTCATTGATAAAGAGGTGGAATCGTGCAATGAAGGTCTTTGTCCAAGTCTACCTTACAAGTGAGAAGCGCCTTAGCAATCATGTCTTTGGTGAACTTTCAGAATCAACCGCAGACTTGTGTTTTTATGAGATTTCATTGAGCTCAGTCATGCAACTTCTGACCTTTTATGAATCTGTAGCAATTGGACCTCCTAAACCAGAAAAGCTTTTCCGTCTGCTTGATATGTATGAGGTCTTAAATGATTTACTCCCTGAAGTAGAATTCTTGTTTCAAGAAGGATGTGATGATATAGTTTTGACTGAATATAATGAAGTCCTGCTACAGCTGGGAGAATCAGTAAGAAAAACAATTACAGAATTCAAGTATGCTGTCCAGTCCTACACTTCATCCAATGCAATGGCCCGTGGTGAAGTGCATCCCCTTACAAAGTATGTTATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT-CTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAG-TAAAATGGTATAGTTGGTGATTATTTTTATATGCAAAAGCCTGAAAAAAAAAAAAAAAAAACTCGANGGGGGGGCCCGGTNCCCATTCNCCCTATAGTTGAGTCNTATTACAATCCCTGGGCCGCCGTTTTTACCA] [+] EMBL AK072138 [GGGAAAAAAAAAAGAAAGAAAGAACGGAAGAGAAGGCCGCCGGCCGTCAGAACAGGAACGGGAACGGAACGGTCAGCGGCCCTTTCAACGGGAGACCCCGGCAGCACGGCATCCGTTCCCGTTCCCTTTTATTCAGTCCCGTCCTTTCCATTGACCGTCCACATCCTCCCCCCTCCTCCACCCGCTGCCACACCATCCGTCGCCGTCGCCGTCGCCCCGCTCGCCATCGGGTTGACTTGACTCCTCCTCCTCCTCGTCCTCTCTCTGTAGTTGTACATACACCTCCCCGCCCTCCGCCTCACCACTCCATTTCCGTCTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTTCTTTACCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGC GGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAATGAGGAACAATGTGACGGTAAGACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGAATATGATAAGGAGTGTTCCCAGGCTTACATAAGCACACGACAGAGTGCAGTAGATGAGAACCTTGGGTCTCTTCGTATTGACAAGCTCAGCATGGAAGAACTTTTGAGCACCAACTGGACCAAGTTAAGTTCATTGATAAAGAGGTGGAATCGTGCAATGAAGGTCTTTGTCCAAGTCTACCTTACAAGTGAGAAGCGCCTTAGCAATCATGTCTTTGGTGAACTTTCAGAATCAACCGCAGACTTGTGTTTTTATGAGATTTCATTGAGCTCAGTCATGCAACTTCTGACCTTTTATGAATCTGTAGCAATTGGACCTCCTAAACCAGAAAAGCTTTTCCGTCTGCTTGATATGTATGAGGTCTTAAATGATTTACTCCCTGAAGTAGAATTCTTGTTTCAAGAAGGATGTGATGATATAGTTTTGACTGAATATAATGAAGTCCTGCTACAGCTGGGAGAATCAGTAAGAAAAACAATTACAGAATTCAAGTATGCTGTCCAGTCCTACACTTCATCCAATGCAATGGCCCGTGGTGAAGTGCATCCCCTTACAAAGTATGTTATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT CTTGATGAAATGTGCAGTTGTAATATTT ] [+] EMBL CB632450 [ TTTATTCAGTCCCGTCCTTTCCATTGACCGTCCACATCCTCCCCCCTCCTCCACCCGCTGCCACACCATCCGTCGCCGTCGCCGTCGCCCAGCTCGCCCTCGGGTTGACTTGACTCCTCCTCCTCCTCGTCCTCTCTCTGTAGTTGTACATACACCTCCCCGCCCTCCGCCTCACCACTCCATTTCCGTCTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTTCTTTACCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGC GGGAAGAAAATCACCTCCACTAATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTTCAGCAGC ] [+] EMBL AK102787 [ CCCCCTCCTCCACCCGCTGCCACACCATCCGTCGCCGTCGCCGTCGCCCCGCTCGCCCTCGGGTTGACTTGACTCCTCCTCCTCCTCGTCCTCTCTCTGTAGTTGTACATACACCTCCCCGCCCTCCGCCTCACCACTCTATTTCCGTCTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTTCTTTACCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGCAGGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAATGAGGAACAATGTGACGGTAAGACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGAATATGATAAGGAGTGTTCCCAGGCTTACATAAGCACACGACAGAGTGCAGTAGATGAGAACCTTGGGTCTCTTCGTATTGACAAGCTCAGCATGGAAGAACTTTTGAGCACCAACTGGACCAAGTTAAGTTCATTGATAAAGAGGTGGAATCGTGCAATGAAGGTCTTTGTCCAAGTCTACCTTACAAGTGAGAAGCGCCTTAGCAATCATGTCTTTGGTGAACTTTCAGAATCAACCGCAGACTTGTGTTTTTATGAGATTTCATTGAGCTCAGTCATGCAACTTCTGACCTTTTATGAATCTGTAGCAATTGGACCTCCTAAACCAGAAAAGCTTTTCCGTCTGCTTGATATGTATGAGGTCTTAAATGATTTACTCCCTGAAGTAGAATTCTTGTTTCAAGAAGGATGTGATGATATAGTTTTGACTGAATATAATGAAGTCCTGCTACAGCTGGGAGAATCAGTAAGAAAAACAATTACAGAATTCAAGTATGCTGTCCAGTCCTACACTTCATCCAATGCAATGGCCCGTGGTGAAGTGCATCCCCTTACAAAGTATGTTATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT CTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAG TAAAATGGTATAGTTGGTGATTATTTTTATATGC ] [+] EMBL AK105652 [ CTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTTCTTTACCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGCAGGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAATGAGGAACAATGTGACGGTAAGACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGAATATGATAAGGAGTGTTCCCAGGCTTACATAAGCACACGACAGAGTGCAGTAGATGAGAACCTTGGGTCTCTTCGTATTGACAAGCTCAGCATGGAAGAACTTTTGAGCACCAACTGGACCAAGTTAAGTTCATTGATAAAGAGGTGGAATCGTGCAATGAAGGTCTTTGTCCAAGTCTACCTTACAAGTGAGAAGCGCCTTAGCAATCATGTCTTTGGTGAACTTTCAGAATCAACCGCAGACTTGTGTTTTTATGAGATTTCATTGAGCTCAGTCATGCAACTTCTGACCTTTTATGAATCCGTAGCAATCGGACCTCCTAAACCAGAAAAGCTTTTCCGTCTGCTTGATATGTATGAGGTCTTAAATGATTTACTCCCTGAAGTAGAATTCTTGTTTCAAGAAGGATGTGATGATATAGTTTTGACTGAATATAATGAAGTCCTGCTACAGCTGGGAGAATCAGTAAGAAAAACAATTACAGAATTCAAGTATGCTGTCCAGTCCTACACTTCATCCAATGCAATGGCCCGTGGTGAAGTGCATCCCCTTACAAAGTATGTTATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT CTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAG TAAAATGGTATAGTTGGTGATTATTTTTATATGC ] [+] EMBL CB628361 [ TTGGCTTTGTCAGGTTCTTTACCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGCAGGGAAGAAAATCACCTCCACTAATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAACGAGGAACAATGTGATGGTAAGACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGCATATGATAAGG ] [+] EMBL CB663144 [ TGGATTTGTCAGGTGCTTTACCACGGTCGGCTTGATCGGATCCCCAATCCTGGGTTCCGGCGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGC GGGAAGAAAATCACCTCCGCTGATTTTATATAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGAGTTAATTAAGCAGTTTTCACACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGAGCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCGTGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCAGCAGCTGACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAGTGAGCTCATAGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTATCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGAGGATGGCAATGTGGATGATTTTTCAAGCAGCTCATTCGATGAGGAACTATGTGACGGTAAGACAACACAGACTGAAACTACTGGAGGATCATAATATTTTGCGACTGATTTGATTCAACATGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTT ] [+] EMBL CB642599 [ TGGACCTGTCAGGTTCTTT CCACGG CGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGC GGGAAGAAAATCACCTCCACTGATTTTATACACGACGGTGAATACATAGTCTACAGCGTGATGGCTGCTGAATTAGTTACGCAc ] [-] EMBL CB663145 [ TATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTTTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATTGTACTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT CTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAG TAAAATGGTATAGTTGGTGATTATTTTTAAAAAAAAAAG ] [-] EMBL CB632451 [ GAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGATTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTATGGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAATTCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACATCTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAATCTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCAAGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCATGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACACAGTTATT CTTGATGAAATGTGCAGTTGTAATATTTGGTTGGTATTAAG TAAAATGGTATAGTTGGTGATTAaa ] [-] EMBL CB628362 [ CAACATTTATTTCATGGTCCAGAAAGTGAAAAATTTAGGGGTTAAAATCTTTTTTGGTGAAGATTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAGCTTCGAGAGGGCATCGTGGAGTCAAGTTCTTTTTTTTTTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTTTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGTTTATTGAACTCAAACAGGGTGGTTTATCCCAGATGGCCAACTCCGTGAAGATGTCAGGATTTTGATATCCCTGAAAATTATACAGGCCTATTGTGATTTCATGGGAAGATACTATAGCCGCCTTGATGGCCTTAGGCCCCTAGAGGGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATTTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTAGAACTTAAAACCCAGTTATT TTTGATGAAAGGTGCAGTTGTAATATTTGGTTTGT ] [+] EMBL AA752901 [ cccnTTGNTGAT ACTGGATCCGGGTGCNCAATCGGAAGTTTCAGCAGCAAGCGATGAGCTACGAGAGGGCATCGTGGAGTCATGTNCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCTTTTTTTCACGGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTANCTTGCAGAGTGTAGAACTTAAAACACAGTTATTCCTTGATGAAATGTGCNNTTGTAATATTTGGTTTGTATTAAGTTAAAATGGTATAGTTGGTGATTATTTTTATATGCTGTTTCCTGAAAAAAAAAAAAAAAAAACTCGANGGGGGGGCCCGGTNCCCATTCNCCCTATAGTTGAGTCNTATTACAATCCCTGGGCCGCCGTTTTTACCA] consensusID : consensus_13183#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence [CTGTTACTGTCNTGGTTCTAAATTTCGTNGTCACNCCCCGATGAANCTACGAGAGGGCTCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCTNNGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTANAACTTAAAACACAGTTATTCTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAGTAAAATGGTATAGTTGGTGATTATTTTTATATGCTGTTTTCCTGAAAAAAAA] [+] EMBL AA752944 [CTGTTACTGTCNTGGTTCTAAATTTCGTNGTCACNCCCCGATGAANCTACGAGAGGGCTCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGCTGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTCATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGAAGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCTNNGGACGATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGAGGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGCAGAGTGTANAACTTAAAACACAGTTATTCTTGATGAAATGTGCAGTTGTAATATTTGGTTTGTATTAAGTAAAATGGTATAGTTGGTGATTATTTTTATATGCTGTTTTCCTGAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13183#0 GGGAAAAAAAAAAGAAAGAAAGAACGGAAGAGAAGGCCGCCGGCCGTCAGAACAGGAACG 60 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 GGAACGGAACGGTCAGCGGCCCTTTCAACGGGAGACCCCGGCAGCACGGCATCCGTTCCC 120 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 GTTCCCTTTTATTCAGTCCCGTCCTTTCCATTGACCGTCCACATCCTCCCCCCTCCTCCA 180 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 CCCGCTGCCACACCATCCGTCGCCGTCGCCGTCGCCCCGCTCGCCCTCGGGTTGACTTGA 240 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 CTCCTCCTCCTCCTCGTCCTCTCTCTGTAGTTGTACATACACCTCCCCGCCCTCCGCCTC 300 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 ACCACTCCATTTCCGTCTTCTTCCTCCTCTCTATCTCTCTCCTCTTGGATTTGTCAGGTT 360 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 CTTTACCACGGCGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAG 420 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 CGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGGGAAGAAAAT 480 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 CACCTCCACTGATTTTATAGAAGACGTTGAATATATAGTCTACAAAATGATGGCTGCTGA 540 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 GTTAATTAAGCAGTTTTCAAACATCACCCTGGGAGAAGAACAGGAGTTATGTGATATTGA 600 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 GCATGCACTCAAGGCACTGCGGAAGAAGATTCTTACTTTGGATTTTGAAAATTCCATGCG 660 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TGTTCATGATCCGCAAAACTCATTTCAGTACTTGGAAGTGCTGTACAAAATTCGGCAGCT 720 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 GACTGAAAGGTTAGGGAGCTTACACCCTGGTGGGGAAGCCAAAGAGCATAATGAGCTCAT 780 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 AGTATATGCTGGCGACCTTTTTGATATGGCAATGGCAAGGCTTGAAGAGGAATTTGTTTA 840 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TCTTCTTACGCATTACAAACAACCAATAGAACAAGGACTTGTTTCTTTCCGGTCTACAGA 900 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 GGATGGCAGTGTGGATGATTTTTCAAGCAGCTCATTCAATGAGGAACAATGTGACGGTAA 960 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 GACAACACAGACTGAAACTACTGGAGGATCAGAATATTTTGCGACTGATTTGATTCAACA 1020 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TGGTGCACTCTCTGCTGTCAAGTCCATTGCCAACTTCATGTTTCTGAGTGAATATGATAA 1080 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 GGAGTGTTCCCAGGCTTACATAAGCACACGACAGAGTGCAGTAGATGAGAACCTTGGGTC 1140 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TCTTCGTATTGACAAGCTCAGCATGGAAGAACTTTTGAGCACCAACTGGACCAAGTTAAG 1200 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TTCATTGATAAAGAGGTGGAATCGTGCAATGAAGGTCTTTGTCCAAGTCTACCTTACAAG 1260 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TGAGAAGCGCCTTAGCAATCATGTCTTTGGTGAACTTTCAGAATCAACCGCAGACTTGTG 1320 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TTTTTATGAGATTTCATTGAGCTCAGTCATGCAACTTCTGACCTTTTATGAATCTGTAGC 1380 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 AATTGGACCTCCTAAACCAGAAAAGCTTTTCCGTCTGCTTGATATGTATGAGGTCTTAAA 1440 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TGATTTACTCCCTGAAGTAGAATTCTTGTTTCAAGAAGGATGTGATGATATAGTTTTGAC 1500 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TGAATATAATGAAGTCCTGCTACAGCTGGGAGAATCAGTAAGAAAAACAATTACAGAATT 1560 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 CAAGTATGCTGTCCAGTCCTACACTTCATCCAATGCAATGGCCCGTGGTGAAGTGCATCC 1620 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 CCTTACAAAGTATGTTATGAACTATATAAAAGCTCTCACAGCTTATAGCAAAACTCTTGA 1680 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TTCGCTTCTAAAGGACACAGATCGAAGATGCCAGCATTTCTCCACTGACATTCAGTCTAT 1740 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 GGCAAACCAATGTCCTCATTTTACTGTCAGTGCATTGCATTTGCAGTCAGTTACTGCAAT 1800 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 TCTAGAAGAAAATCTTGAAGCTGGGTCCAGATTATATAGAGATGATCGATTACGAAACAT 1860 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 CTTTATGATGAACAACATCTACTACATGGTCCAGAAAGTGAAAAACTCAGAGCTTAAAAT 1920 consensus_13183#1 ------------------------------------------------------------ consensus_13183#0 CTTTCTTGGTGATGACTGGATCCGGGTGCACAATCGGAAGTTTCAGCAGCAAGCGATGAG 1980 consensus_13183#1 ---------CTGTTACTGT-CNTGGTTCTAAATTTCGTNGTCACNCC--CCGATGA--AN 46 * **** ** * * * * * ** * * * ** * consensus_13183#0 CTACGAGAGGGCATCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGC 2040 consensus_13183#1 CTACGAGAGGGC-TCGTGGAGTCATGTTCTCTCTTTTCTGAGTGATGATGGCTTGTGTGC 105 ************ *********************************************** consensus_13183#0 TGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTC 2100 consensus_13183#1 TGCTGGGGATGGTGCTTCTCGTAAAATCATTAAAGAGAAATTCAAAAATTTCAATCTGTC 165 ************************************************************ consensus_13183#0 ATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGA 2160 consensus_13183#1 ATTTGAAGATGCTTATCGAACTCAAACAGGATGGTCTATCCCAGATGACCAACTCCGTGA 225 ************************************************************ consensus_13183#0 AGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCACGGGACG 2220 consensus_13183#1 AGATGTCAGGATTTCGATATCCCTGAAAATTATACAGGCCTATCGTACTTTCTNNGGACG 285 **************************************************** ***** consensus_13183#0 ATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGA 2280 consensus_13183#1 ATACTATAGCCGCCTTGATGGCACTAGGCACCTAGAGCGATACATAAAGTATAAGCCTGA 345 ************************************************************ consensus_13183#0 GGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGC 2340 consensus_13183#1 GGATTTGGAGAAACTTTTGCTCGATCTTTTTGAAGGAGCTCAAAAAACATTGTAGCTTGC 405 ************************************************************ consensus_13183#0 AGAGTGTAGAACTTAAAACACAGTTATTCTTGATGAAATGTGCAGTTGTAATATTTGGTT 2400 consensus_13183#1 AGAGTGTANAACTTAAAACACAGTTATTCTTGATGAAATGTGCAGTTGTAATATTTGGTT 465 ******** *************************************************** consensus_13183#0 TGTATTAAGTAAAATGGTATAGTTGGTGATTATTTTTATATGCAAAAGCCTGAAAAAAAA 2460 consensus_13183#1 TGTATTAAGTAAAATGGTATAGTTGGTGATTATTTTTATATGCTGTTTTCCTGAAAAAAA 525 ******************************************* * ******* consensus_13183#0 AAAAAAAAAACTCGANGGGGGGGCCCGGTNCCCATTCNCCCTATAGTTGAGTCNTATTAC 2520 consensus_13183#1 A----------------------------------------------------------- 526 * consensus_13183#0 AATCCCTGGGCCGCCGTTTTTACCA 2545 consensus_13183#1 ------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||