These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13197#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2029 fasta sequence [CACACTCTCTCTCCTCTCTTTCTCGCCCGTTTCCCCACCACCACCACCACCACCACCTCCCCTCTCCCATTCGACCAAATCGGCGAGGGGAATAGCCCCCCCGCGCGCCGCGCCTCCTCTCGTCGCCGGCGATGGCCGACGGCGAGGCCTCCTCCGGCGCGTACAGGGAGTTCAAGGCGCTGACGGAGGCGGCGGACCGCAAGTTCGCGCGCGCGCGCGACGTGCCGCTCTACGGCGGCGGGGTGGACCACCACAGCCGGAAGGCGTTCAAGGCGTACACGCGGCTGTGGCGCCTGCAGCAGGAGCGGCGGCGGGAGCTCGTCGCGGGCGGGCTGCGGCGGTGGGAGATCGGGGAGGTGGCCTCCCGGATCGGGCAGCTCTACTACGCGCGCTACCTCCGCACCGCCGAGCCGCGCTCGCTCGTCGGCGCCTACGTGTTCTACGAGGCCATCTACAGCCGCGGGTACTTCGCCGCCGCGGCGCAGGTGGTGGTGGGCGGCGGCTACAGGCACCAGGGCCTCCTGATCCGGTACAAGGAGCTGCGGTTCATCGCGCGCTTCCTCGTCGTGGCCATGCTGATGCGGCGGGCCGAGGCGGTGGACCACCTCGCTTCCCGCCTCCGTTCGCTCGTCGAGGAGACCAAGTCGGCATACCCCAAAACCAACTTCAAGGAATGGAAACAAGTGCTTCAAGAGCTTGGGAGATTCTTGAAAGCTGATGGAGCATACAAGGGATCTAGATCACTGAGATATGACAACTTGTTTGACTCTTTTCCGTCGAACCTTGCACCTATTGCACGATTCCATTCAAAAAGAGTACTGAAACTGAAAGAAGCTGTATTGACAAGCTATCACAGAAACGAGGTGAAGTTCACAGAACTAACTCTGGACACTTTCAGAATGCTACAGTGTCTGGAGTGGGAACCCACTGGGTCTTATCAGATTGCTGCCAAAGAGCTTACAGAAAATGGCACTATAAGTGATCAGAGTGGACCCTCTGGCCTGATTGATATCCACCTATCATCAGAAATATCTGATGGAAATCTTCCTGCAAATCCTCAAAAGGCAATCATATATCATCCTACAGTATCTCATCTTCTAGCGGTTCTAGCCACAGTCTGTGAGGAGCTTTCTCAAGATAGCATCTTACTTGTCTATCTATCAGCATCAGGTTTTTCCGAGCAGAACATTACTTCTCAAAAGTATGCCTCAAGCTCATCATATGCAAGGGCAACTTCCGTGTATCCCATCGATAAGCCAAATTCCAATGGCAATTCAGATAATCATCTATGGCTTGGTCCCCGTGGAAGTGGAGGTCCAAACAATCTTTATCCAGAAGATCTGATTCCCTTTACAAGATATCCACTATTCCTTGTTATCGATAGTGAAAATAGTCATGCATTCA----AGGCTATACATAATGCAGAGAAGGGAGAGCCAGCTGCCTTGCTACTTTCACCTAGGATAGCATCAGCAATGCCTGGTGTGGAATCCACGAGTAATGGAAGCCAATTTACGTACTTCCTCACAGCTCCAATGCAAGCCTTCTGCCAATTAGCTGGGATAACTTCTGACATAGACAGCGATACATATGCTAACGCGGAAATCATACTTTTCTCCGCTTTGGAACAATATGAAGGAATCCTCTGCACATCTGTTGGATTGAACAACGTCTGGGGACAAATTTTACCAGATCCTTTTCTCAGGCGCCTGATCGTCAGGTTTATTTTCTGCCGAGCAGTTATATTCTATTTTCACCCTGAGGAGAATGGTGAACATATACCAATCTGCCTACCCAGTCTTCCAGAATCAGTCGCGCCAAATGCTGAAGCCATCATGGCCCCCATCCTTGAGTTTGCAGAAAACCTTGTTGTGAGCGACCGGTTTCATTTCCGACATTCTGTCCACAACAATAAGAAATGATGATCAGGAGCAACAACTCAATCCTTCTGTAGATACCTCCATGGTATATAATCAAGTTATTTGTTGATTTGTTCGTATTTATACAGCAAACGGAGCATGATTCAGTATGA] [+] EMBL AK065853 [CACACTCTCTCTCCTCTCTTTCTCGCCCGTTTCCCCACCACCACCACCACCACCACCTCCCCTCTCCCATTCGACCAAATCGGCGAGGGGAATAGCCCCCCCGCGCGCCGCGCCTCCTCTCGTCGCCGGCGATGGCCGACGGCGAGGCCTCCTCCGGCGCGTACAGGGAGTTCAAGGCGCTGACGGAGGCGGCGGACCGCAAGTTCGCGCGCGCGCGCGACGTGCCGCTCTACGGCGGCGGGGTGGACCACCACAGCCGGAAGGCGTTCAAGGCGTACACGCGGCTGTGGCGCCTGCAGCAGGAGCGGCGGCGGGAGCTCGTCGCGGGCGGGCTGCGGCGGTGGGAGATCGGGGAGGTGGCCTCCCGGATCGGGCAGCTCTACTACGCGCGCTACCTCCGCACCGCCGAGCCGCGCTCGCTCGTCGGCGCCTACGTGTTCTACGAGGCCATCTACAGCCGCGGGTACTTCGCCGCCGCGGCGCAGGTGGTGGTGGGCGGCGGCTACAGGCACCAGGGCCTCCTGATCCGGTACAAGGAGCTGCGGTTCATCGCGCGCTTCCTCGTCGTGGCCATGCTGATGCGGCGGGCCGAGGCGGTGGACCACCTCGCTTCCCGCCTCCGTTCGCTCGTCGAGGAGACCAAGTCGGCATACCCCAAAACCAACTTCAAGGAATGGAAACAAGTGCTTCAAGAGCTTGGGAGATTCTTGAAAGCTGATGGAGCATACAAGGGATCTAGATCACTGAGATATGACAACTTGTTTGACTCTTTTCCGTCGAACCTTGCACCTATTGCACGATTCCATTCAAAAAGAGTACTGAAACTGAAAGAAGCTGTATTGACAAGCTATCACAGAAACGAGGTGAAGTTCACAGAACTAACTCTGGACACTTTCAGAATGCTACAGTGTCTGGAGTGGGAACCCACTGGGTCTTATCAGATTGCTGCCAAAGAGCTTACAGAAAATGGCACTATAAGTGATCAGAGTGGACCCTCTGGCCTGATTGATATCCACCTATCATCAGAAATATCTGATGGAAATCTTCCTGCAAATCCTCAAAAGGCAATCATATATCATCCTACAGTATCTCATCTTCTAGCGGTTCTAGCCACAGTCTGTGAGGAGCTTTCTCAAGATAGCATCTTACTTGTCTATCTATCAGCATCAGGTTTTTCCGAGCAGAACATTACTTCTCAAAAGTATGCCTCAAGCTCATCATATGCAAGGGCAACTTCCGTGTATCCCATCGATAAGCCAAATTCCAATGGCAATTCAGATAATCATCTATGGCTTGGTCCCCGTGGAAGTGGAGGTCCAAACAATCTTTATCCAGAAGATCTGATTCCCTTTACAAGATATCCACTATTCCTTGTTATCGATAGTGAAAATAGTCATGCATTCA AGGCTATACATAATGCAGAGAAGGGAGAGCCAGCTGCCTTGCTACTTTCACCTAGGATAGCATCAGCAATGCCTGGTGTGGAATCCACGAGTAATGGAAGCCAATTTACGTACTTCCTCACAGCTCCAATGCAAGCCTTCTGCCAATTAGCTGGGATAACTTCTGACATAGACAGCGATACATATGCTAACGCGGAAATCATACTTTTCTCCGCTTTGGAACAATATGAAGGAATCCTCTGCACATCTGTTGGATTGAACAACGTCTGGGGACAAATTTTACCAGATCCTTTTCTCAGGCGCCTGATCGTCAGGTTTATTTTCTGCCGAGCAGTTATATTCTATTTTCACCCTGAGGAGAATGGTGAACATATACCAATCTGCCTACCCAGTCTTCCAGAATCAGTCGCGCCAAATGCTGAAGCCATCATGGCCCCCATCCTTGAGTTTGCAGAAAACCTTGTTGTGAGCGACCGGTTTCATTTCCGACATTCTGTCCACAACAATAAGAAATGATGATCAGGAGCAACAACTCAATCCTTCTGTAGATACCTCCATGGTATATAATCAAGTTATTTGTTGATTTGTTCGTATTTATACAGCAAACGGAGCATGATTCAGTATG ] [+] EMBL AK072191 [ CCCCACCACCACCACCACCACCACCTCCCCTCTCCCATTCGACCAAATCGGCGAGGGGAATAGCCCCCCCGCGCGCCGCGCCTCCTCTCGTCGCCGGCGATGGCCGACGGCGAGGCCTCCTCCGGCGCGTACAGGGAGTTCAAGGCGCTGACGGAGGCGGCGGACCGCAAGTTCGCGCGCGCGCGCGACGTGCCGCTCTACGGCGGCGGGGTGGACCACCACAGCCGGAAGGCGTTCAAGGCGTACACGCGGCTGTGGCGCCTGCAGCAGGAGCGGCGGCGGGAGCTCGTCGCGGGCGGGCTGCGGCGGTGGGAGATCGGGGAGGTGGCCTCCCGGATCGGGCAGCTCTACTACGCGCGCTACCTCCGCACCGCCGAGCCGCGCTCGCTCGTCGGCGCCTACGTGTTCTACGAGGCCATCTACAGCCGCGGGTACTTCGCCGCCGCGGCGCAGGTGGTGGTGGGCGGCGGCTACAGGCACCAGGGCCTCCTGATCCGGTACAAGGAGCTGCGGTTCATCGCGCGCTTCCTCGTCGTGGCCATGCTGATGCGGCGGGCCGAGGCGGTGGACCACCTCGCTTCCCGCCTCCGTTCGCTCGTCGAGGAGACCAAGTCGGCATACCCCAAAACCAACTTCAAGGAATGGAAACAAGTGCTTCAAGAGCTTGGGAGATTCTTGAAAGCTGATGGAGCATACAAGGGATCTAGATCACTGAGATATGACAACTTGTTTGACTCTTTTCCGTCGAACCTTGCACCTATTGCACGATTCCATTCAAAAAGAGTACTGAAACTGAAAGAAGCTGTATTGACAAGCTATCACAGAAACGAGGTGAAGTTCACAGAACTAACTCTGGACACTTTCAGAATGCTACAGTGTCTGGAGTGGGAACCCACTGGGTCTTATCAGATTGCTGCCAAAGAGCTTACAGAAAATGGCACTATAAGTGATCAGAGTGGACCCTCTGGCCTGATTGATATCCACCTATCATCAGAAATATCTGATGGAAATCTTCCTGCAAATCCTCAAAAGGCAATCATATATCATCCTACAGTATCTCATCTTCTAGCGGTTCTAGCCACAGTCTGTGAGGAGCTTTCTCAAGATAGCATCTTACTTGTCTATCTATCAGCATCAGGTTTTTCCGAGCAGAACATTACTTCTCAAAAGTATGCCTCAAGCTCATCATATGCAAGGGCAACTTCCGTGTATCCCATCGATAAGCCAAATTCCAATGGCAATTCAGATAATCATCTATGGCTTGGTCCCCGTGGAAGTGGAGGTCCAAACAATCTTTATCCAGAAGATCTGATTCCCTTTACAAGATATCCACTATTCCTTGTTATCGATAGTGAAAATAGTCATGCATTCAAGGCAGGCTATACATAATGCAGAGAAGGGAGAGCCAGCTGCCTTGCTACTTTCACCTAGGATAGCATCAGCAATGCCTGGTGTGGAATCCACGAGTAATGGAAGCCAATTTACGTACTTCCTCACAGCTCCAATGCAAGCCTTCTGCCAATTAGCTGGGATAACTTCTGACATAGACAGCGATACATATGCTAACGCGGAAATCATACTTTTCTCCGCTTTGGAACAATATGAAGGAATCCTCTGCACATCTGTTGGATTGAACAACGTCTGGGGACAAATTTTACCAGATCCTTTTCTCAGGCGCCTGATCGTCAGGTTTATTTTCTGCCGAGCAGTTATATTCTATTTTCACCCTGAGGAGAATGGTGAACATATACCAATCTGCCTACCCAGTCTTCCAGAATCAGTCGCGCCAAATGCTGAAGCCATCATGGCCCCCATCCTTGAGTTTGCAGAAAACCTTGTTGTGAGCGACCGGTTTCATTTCCGACATTCTGTCCACAACAATAAGAAATGATGATCAGGAGCAACAACTCAATCCTTCTGTAGATACCTCCATGGTATATAATCAAGTTATTTGTTGATTTGTTCGTA ] [+] EMBL CB673702 [ ACCACCACCACCACCTCCCCTCTCCCATTCGACCAAATCGGCGAGGGGAATAGCCCCCCCGCGCGCCGCGCCTCCTCTCGTCGCCGGCGATGGCCGACGGCGAGGCCTCCTCCGGCGCGTACAGGGAGTTCAAGGCGCTGACGGAGGCGGCGGACCGCAAGTTCGCGCGCGCGCGCGACGTGCCGCTCTACGGCGGCGGGGTGGACCACCACAGCCGGAAGGCGTTCAAGGCGTACACGCGGCTGTGGCGCCTGCAGCAGGAGCGGCGGCGGGAGCTCGTCGCGGGCGGGCTGCGGCGGTGGGAGATCGGGGAGGTGGCCTCCCGGATCGGGCAGCTCTACTACGCGCGCTACCTCCGCACCGCCGAGCCGCGCTCGCTCGTCGGCGCCTACGTGTTCTACGAGGCCATCTACAGCCGCGGGTACTTCGCCGCCGCGGCGCAGGTGGTGGTGGGCGGCGGCTACAGGCACCAGGGCCTCCTGATCCGGTACAAGGAGCTGCGGTTCATCGCGCGCTTCCTCGTCGTGGCCATGCTGATGCGGCGGGCCGAGGCGGTGGACCACCTCGCTTCCCGCCTCCGTTCGCTCGTCGAGGAGACCAAGTCGGCATACCCCAAAACCAACTTCAAGGAATGGAAACAAGTGCTTCAAGAGCTTGGGAGATTCTTGAAAGCTGATGGAGCATACAAGGGATCTAGATCACTGAGATATGACAACTTGTTTGACTCTTTTCCGTCGAACCTTGCACCTATTGCACGATTCCATTCAAAAAGAGTACTGAAACTGAAAGAAGCTGTATT ] [+] EMBL CB637186 [ TCCTGATCCGGTACAAGGAGCTGCGGTTCATCGCGCGCTTCCTCGTCGTGGCCATGCTGATGCGGCGGGCCGAGGCGGTGGACCACCTCGCTTCCCGCCTCCGTTCGCTCGTCGAGGAGACCAAGTCGGCGTACCCCAAAACCAACTTCAAGGAATGGAAACAAGTGCTTCAAGAGCTTGGGAGATTCTTGAAAGCTGATGGAGCATACAAGGGATCTAGATCACTGAGATATGACAACTTGTTTGACTCTTTTCCGTCGAACCTTGCACCTATTGCACGATTCCATTCAAAAAGAGTACTGAAACTGAAAGAAGCTGTATTGACAACCTATCACAGAAACGAGGTGAAGTTCACAGAACTAACTCTGGACACTTTCATAATGCTACAGTGTCTGGAGTGGGAACCCACTGGGTCTTATCAGATTGCTGCCAAAGAGCTTACAGAAAATGGCACTATAAGTGATCAGAGTGGACCCTCTGGCCTGATTGATATCCACCTATCATCAGAAATATCTGATGGAAATCTTCCTGCAAATCCTC AAAGGCAATCATATATCATCCTACAGTATCTC ] [+] EMBL CB628694 [ CCTGATCCGGTACAAGGAGCTGCGGTTCATCGCGCGCTTCCTCGTCGTGGCCATGCTGATGCGGCGGGCCGAGGCGGTGGACCACCTCGCTTCCCGCCTCCGTTCGCTCGTCGAGGAGACCAAGTCGGCATACCCCAAAACCAACTTCAAGGAATGGAAACAAGTGCTTCAAGAGCTTGGGAGATTCTTGAAAGCTGATGGAGCATACAAGGGATCTAGATCACTGAGATATGACAACTTGTTTGACTCTTTTCCGTCGAACCTTGCACCTATTGCACGATTCCATTCAAAAAGAGTACTGAAACTGAAAGAAGCTGTATTGACAAGCTATCACAGAAACGAGGTGAAGTTCACAGAACTAACTCTGGACACTTTCAGAATGCTACAGTGTCTGGAGTGGGAACCCACTGGGTCTTATCAGATTGCTGCCAAAGAGCTTACAGAAAATGGCACTATAAGTGATCAGAGTGGACCCTCTGGCCTGATTGATATCCACCTATCATCAGAAATATCTGATGGAAATCTTCCTGCAAATCCTCAAAAGGCAATCATATATCATCCTACAGTATCTCATCTTCTAGCGGTTCTAGCCACAGTCTGTGAGGAGCTTTCTCAAGATAGCATCTTACTTGTCTATCTATCAGCATCAGGTTTTTCCGAGCAGAACATTACTTCTCAAAAGTATGCCTCAAGCTCATCATATGCAAGGGCAACTTCCGTGTATCCCATCGATAAGCCAAATTCCAATGGCAATTCAGATAATCATCTATGGCTTGGTCCCCGTGGAAGTGGAGGTCCAA ] [+] EMBL CB637066 [ CCTGATCCGGTACAAGGAGCTGCGGTTCATCGCGCGCTTCCTCGTCGTGGCCATGCTGATGCGGCGGGCCGAGGCGGTGGACCACCTCGCTTCCCGCCTCCGTTCGCTCGTCGAGGAGACCAAGTCGGCATACCCCAAAACCAACTTCAAGGAATGGAAACAAGTGCTTCAAGAGCTTGGGAGATTCTTGAAAGCTGATGGAGCATACAAGGGATCTAGATCACTGAGATATGACAACTTGTTTGACTCTTTTCCGTCGAACCTTGCACCTATTGCACGATTCCATTCAAAAAGAGTACTGAAACTGAAAGAAGCTGTATTGACAAGCTATCACAGAAACGAGGTGAAGTTCACAGAACTAACTCTGGACACTTTCAGAATGCTACAGTGTCTGGAGTGGGAACCCACTGGGTCTTATCAGATTGCTGCCAAAGAGCTTACAGAAAATGGCACTATAAGTGATCAGAGTGGACCCTCTGGCCTGATTGATATCCACCTATCATCAGAAATATCTGATGGAAATCTTCCTGCAAATCCTCAAAAGGCAATCATATATCATCCTACAGTAT ] [+] EMBL CB642848 [ CGAACCTTGCACCTATTGCACGATTCCATTCAAAAAGAGTACTGAAACTGAAAGAAGCTGTATTGACAAGCTATCACACAAACGAGGTGAAGTTCACAGAACTAACTCTGGACACTTTCAGAATGCTACAGTGTCTGGAGTGGGAACCCACTGGGTCTTATCAGATTGCTGCCAAAGAGCTTACAGAAAATGGCACTATAAGTGATCAGAGTGGACCCTCTGGCCTGATTGATATCCACCTATCATCAGAAATATCTGATGGAAATCTTCCTGCAAATCCTCAAAAGGCAATCATATATCATCCTACAGTATCTCATCTTCTAGCGGTTCTAGCCACAGTCTGTGAGGAGCTTTCTCAAGATAGCATCTTACTTGTCTATCTATCAGCATCAGGTTTTTCCGAGCAGAACATTACTTCTCAAAAGTATGCCTCAAGCTCATCATATGCAAGGGCAACTTCCGTGTATCCCATCGATAAGCCAAATTCCAATGGCAATTCAGATAATCATCTATGGCTTGGTCCCCGTGGAAGTGGAGGTCCAAACAATCTTTATCCAGAAGATCTGATTCCCTTTACAAGATATCCACTATTCCTTGTTATCGATAGTGAAAATAGTCATGCATTCA AGGCTATACATAATGCAGAGAAGGGAGAGCCAGCTGCCTTGCTACTTTCACCTAGGATAGCATCAGCAATGCCTGGTGTGGAATCCACGAGTAATGGAAGCCAATTTACGTACTTCCTCACAGCTCCAATGC ] [-] EMBL CB642849 [ GCGATACATATGCTAACGCGGAAATCATACTTTTCTCCGCTTTGGAACAATATGAAGGAATCCTCTGCACATCTGTTGGATTGAACAACGTCTGGGGACAAATTTTACCAGATCCTTTTCTCAGGCGCCTGATCGTCAGGTTTATTTTCTGCCGAGCAGTTATATTCTATTTTCACCCTGAGGAGAATGGTGAACATATACCAATCTGCCTACCCAGTCTTCCAGAATCAGTCGCGCCAAATGCTGAAGCCATCATGGCCCCCATCCTTGAGTTTGCAGAAAACCTTGTTGTGAGCGACCGGTTTCATTTCCGACATTCTGTCCACAACAATAAGAAATGATGATCAGGAGCAACAACTCAATCCTTCTGTAGATACCTCCATGGTATATAATCAAGTTATTTGTTGATTTGTTCGTATTTATACAGCAAACGGAGCATGATTCAGTATGA] [-] EMBL CB673703 [ GATACATATGCTAACGCGGAAATCATACTTTTCTCCGCTTTGGAACAATATGAAGGAATCCTCTGCACATCTGTTGGATTGAACAACGTCTGGGGACAAATTTTACCAGATCCTTTTCTCAGGCGCCTGATCGTCAGGTTTATTTTCTGCCGAGCAGTTATATTCTATTTTCACCCTGAGGAGAATGGTGAACATATACCAATCTGCCTACCCAGTCTTCCAGAATCAGTCGCGCCAAATGCTGAAGCCATCATGGCCCCCATCCTTGAGTTTGCAGAAAACCTTGTTGTGAGCGACCGGTTTCATTTCCGACATTCTGTCCACAACAATAAGAAATGATGATCAGGAGCAACAACTCAATCCTTCTGTAGATACCTCCATGGTATATAATCAAGTTATTTGTTGATTTGTTCGTATTTATACAGCAAACGGAGCATGATTCAGTATGA] [-] EMBL CB628695 [ TACATATGCTAACGCGGAAATCATACTTTTCTCCGCTTTGGAACAATATGAAGGAATCCTCTGCACATCTGTTGGATTGAACAACGTCTGGGGACAAATTTTACCAGATCCTTTTCTCAGGCGCCTGATCGTCAGGTTTATTTTCTGCCGAGCAGTTATCTTCTATTTTCACCCTGAGGAGAATGGTGAACATATACCAATCTGCCTACCCAGTCTTCCAGAATCAGTCGCGCCAAATGCTGAAGCCATCATGGCCCCCATCCTTGAGTTTGCAGAAAACCTTGTTGTGAGCGACCGGTTTCATTTCCGACATTCTGTCCGCAACAATAAGAAATGATGATCAGGAGCAACAACTCAATCCTTCTGTAGATACCTCCATGGTATATAATCAAGTTATTTGTTGATTTGTTCGTATTTATACAGCAAACGGAGCATGATTCAGTATGA] consensusID : consensus_13197#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 509 fasta sequence [TTTACCAATCCTTTTNTCAGGCGCCTGATCGTCAGGTTTATTTTCTCCCGACCAAGTGTATCTTCTATTTTCACCCCTGAGGAGAATGGTGAACATATACCCATCTGCCTACNCCNGTTCTTCCAGAATCAGTCGCNCCACAATGCTGATACCCCTCATGCGCCCCCATCCTTGAGTTTCNCAGAAANCCTTGGTTGTGTAGCGACCGGTTTCAGTTTCCGACATTCGTGTCCGCAACCATAAGAAATGTATGATCCAGGAGCAACAAACGTCAATCCGTTCTGTAGATACCTCCCCTGGTATATAATCACAGTTAGTTTGGTGAGTTTGTTCGTATTTATACNGCCCAACGGAGCCATGATTCAGTATGAACCACGGCGTGCTGCCAGCACCNCCACTTGGAAAGGGTGAATAATTTATCATTTTTCCCTNCTTCTATNTCCCAAAAAAAATAAAATAAAAATATAAAATAAAAAAAAAAAAAAAAAAANAACCCACCAAAAAAAAAA] [+] EMBL BM421966 [TTTACCAATCCTTTTNTCAGGCGCCTGATCGTCAGGTTTATTTTCTCCCGACCAAGTGTATCTTCTATTTTCACCCCTGAGGAGAATGGTGAACATATACCCATCTGCCTACNCCNGTTCTTCCAGAATCAGTCGCNCCACAATGCTGATACCCCTCATGCGCCCCCATCCTTGAGTTTCNCAGAAANCCTTGGTTGTGTAGCGACCGGTTTCAGTTTCCGACATTCGTGTCCGCAACCATAAGAAATGTATGATCCAGGAGCAACAAACGTCAATCCGTTCTGTAGATACCTCCCCTGGTATATAATCACAGTTAGTTTGGTGAGTTTGTTCGTATTTATACNGCCCAACGGAGCCATGATTCAGTATGAACCACGGCGTGCTGCCAGCACCNCCACTTGGAAAGGGTGAATAATTTATCATTTTTCCCTNCTTCTATNTCCCAAAAAAAATAAAATAAAAATATAAAATAAAAAAAAAAAAAAAAAAANAACCCACCAAAAAAAAAA] consensusID : consensus_13197#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 392 fasta sequence [NTGGCCCCCATCCTNGAGTANTGCNGAAAACTTGTTGTGAGCGACCGGTTNCATTTCCNACATTCTGTCCGCAANANTAAGAAATGATGATCNGGGAGCAACAACTCATTCCTTCTGTAGATACCTCCATGGTATATAATCAAGTTATNTGTNGATNTGTTCGTATTTATACAGCAAACGGGANCATGANNCGGTATGAAACAGGCTGCTGCANCAACTGCATCTTGGAAAAAGGTNAAATGATCTATCCATTTATCNCCTGCTTCATCTCCAANGAAACATCTGTACAANTTNGGTTAGGTGGTCCTTACCTTCTGATCTTTGCCTNTGTTNGGGGCTTCTCTTTCCTATGCCNNNCCGGTNTGTGGTGGANAAGGACAGTTTGTAACCTG] [+] EMBL BE228733 [NTGGCCCCCATCCTNGAGTANTGCNGAAAACTTGTTGTGAGCGACCGGTTNCATTTCCNACATTCTGTCCGCAANANTAAGAAATGATGATCNGGGAGCAACAACTCATTCCTTCTGTAGATACCTCCATGGTATATAATCAAGTTATNTGTNGATNTGTTCGTATTTATACAGCAAACGGGANCATGANNCGGTATGAAACAGGCTGCTGCANCAACTGCATCTTGGAAAAAGGTNAAATGATCTATCCATTTATCNCCTGCTTCATCTCCAANGAAACATCTGTACAANTTNGGTTAGGTGGTCCTTACCTTCTGATCTTTGCCTNTGTTNGGGGCTTCTCTTTCCTATGCCNNNCCGGTNTGTGGTGGANAAGGACAGTTTGTAACCTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_13197#0 CACACTCTCTCTCCTCTCTTTCTCGCCCGTTTCCCCACCACCACCACCACCACCACCTCC 60 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 CCTCTCCCATTCGACCAAATCGGCGAGGGGAATAGCCCCCCCGCGCGCCGCGCCTCCTCT 120 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 CGTCGCCGGCGATGGCCGACGGCGAGGCCTCCTCCGGCGCGTACAGGGAGTTCAAGGCGC 180 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 TGACGGAGGCGGCGGACCGCAAGTTCGCGCGCGCGCGCGACGTGCCGCTCTACGGCGGCG 240 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 GGGTGGACCACCACAGCCGGAAGGCGTTCAAGGCGTACACGCGGCTGTGGCGCCTGCAGC 300 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 AGGAGCGGCGGCGGGAGCTCGTCGCGGGCGGGCTGCGGCGGTGGGAGATCGGGGAGGTGG 360 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 CCTCCCGGATCGGGCAGCTCTACTACGCGCGCTACCTCCGCACCGCCGAGCCGCGCTCGC 420 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 TCGTCGGCGCCTACGTGTTCTACGAGGCCATCTACAGCCGCGGGTACTTCGCCGCCGCGG 480 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 CGCAGGTGGTGGTGGGCGGCGGCTACAGGCACCAGGGCCTCCTGATCCGGTACAAGGAGC 540 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 TGCGGTTCATCGCGCGCTTCCTCGTCGTGGCCATGCTGATGCGGCGGGCCGAGGCGGTGG 600 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 ACCACCTCGCTTCCCGCCTCCGTTCGCTCGTCGAGGAGACCAAGTCGGCATACCCCAAAA 660 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 CCAACTTCAAGGAATGGAAACAAGTGCTTCAAGAGCTTGGGAGATTCTTGAAAGCTGATG 720 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 GAGCATACAAGGGATCTAGATCACTGAGATATGACAACTTGTTTGACTCTTTTCCGTCGA 780 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 ACCTTGCACCTATTGCACGATTCCATTCAAAAAGAGTACTGAAACTGAAAGAAGCTGTAT 840 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 TGACAAGCTATCACAGAAACGAGGTGAAGTTCACAGAACTAACTCTGGACACTTTCAGAA 900 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 TGCTACAGTGTCTGGAGTGGGAACCCACTGGGTCTTATCAGATTGCTGCCAAAGAGCTTA 960 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 CAGAAAATGGCACTATAAGTGATCAGAGTGGACCCTCTGGCCTGATTGATATCCACCTAT 1020 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 CATCAGAAATATCTGATGGAAATCTTCCTGCAAATCCTCAAAAGGCAATCATATATCATC 1080 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 CTACAGTATCTCATCTTCTAGCGGTTCTAGCCACAGTCTGTGAGGAGCTTTCTCAAGATA 1140 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 GCATCTTACTTGTCTATCTATCAGCATCAGGTTTTTCCGAGCAGAACATTACTTCTCAAA 1200 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 AGTATGCCTCAAGCTCATCATATGCAAGGGCAACTTCCGTGTATCCCATCGATAAGCCAA 1260 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 ATTCCAATGGCAATTCAGATAATCATCTATGGCTTGGTCCCCGTGGAAGTGGAGGTCCAA 1320 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 ACAATCTTTATCCAGAAGATCTGATTCCCTTTACAAGATATCCACTATTCCTTGTTATCG 1380 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 ATAGTGAAAATAGTCATGCATTCAAGGCTATACATAATGCAGAGAAGGGAGAGCCAGCTG 1440 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 CCTTGCTACTTTCACCTAGGATAGCATCAGCAATGCCTGGTGTGGAATCCACGAGTAATG 1500 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 GAAGCCAATTTACGTACTTCCTCACAGCTCCAATGCAAGCCTTCTGCCAATTAGCTGGGA 1560 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 TAACTTCTGACATAGACAGCGATACATATGCTAACGCGGAAATCATACTTTTCTCCGCTT 1620 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 TGGAACAATATGAAGGAATCCTCTGCACATCTGTTGGATTGAACAACGTCTGGGGACAAA 1680 consensus_13197#1 ------------------------------------------------------------ consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 TTTTACCAGATCCTTTTCTCAGGCGCCTGATCGTCAGGTTTATTTTCTGCCGAGCAGTTA 1740 consensus_13197#1 -TTTACCA-ATCCTTTTNTCAGGCGCCTGATCGTCAGGTTTATTTTCTCCCGACCAAGTG 58 consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 TAT--TCTATTTTCACCC-TGAGGAGAATGGTGAACATATACCAATCTGCCTACCCAG-- 1795 consensus_13197#1 TATCTTCTATTTTCACCCCTGAGGAGAATGGTGAACATATACCCATCTGCCTACNCCNGT 118 consensus_13197#2 ------------------------------------------------------------ consensus_13197#0 TCTTCCAGAATCAGTCGCGCCA-AATGCTGA-AGCCATCATG-GCCCCCATCCTTGAGTT 1852 consensus_13197#1 TCTTCCAGAATCAGTCGCNCCACAATGCTGATACCCCTCATGCGCCCCCATCCTTGAGTT 178 consensus_13197#2 ---------------------------------------NTG-GCCCCCATCCTNGAGTA 20 ** *********** **** consensus_13197#0 T-GCAGAAAACCTTG-TTGTG-AGCGACCGGTTTCA-TTTCCGACATTC-TGTCCACAAC 1907 consensus_13197#1 TCNCAGAAANCCTTGGTTGTGTAGCGACCGGTTTCAGTTTCCGACATTCGTGTCCGCAAC 238 consensus_13197#2 NTGCNGAAAAC-TTG-TTGTG-AGCGACCGGTTNCA-TTTCCNACATTC-TGTCCGCAAN 75 * **** * *** ***** *********** ** ***** ****** ***** *** consensus_13197#0 AATAAGAAATG-ATGATC-AGGAGCAACAAC--TCAATCC-TTCTGTAGATACCTCCA-T 1961 consensus_13197#1 CATAAGAAATGTATGATCCAGGAGCAACAAACGTCAATCCGTTCTGTAGATACCTCCCCT 298 consensus_13197#2 ANTAAGAAATG-ATGATCNGGGAGCAACAAC--TCATTCC-TTCTGTAGATACCTCCA-T 130 ********* ****** ********** *** *** **************** * consensus_13197#0 GGTATATAATCA-AGTTA-TTTGTTGA-TTTGTTCGTATTTATACAGCA-AACGGAGC-A 2016 consensus_13197#1 GGTATATAATCACAGTTAGTTTGGTGAGTTTGTTCGTATTTATACNGCCCAACGGAGCCA 358 consensus_13197#2 GGTATATAATCA-AGTTA-TNTGTNGA-TNTGTTCGTATTTATACAGCA-AACGGGANCA 186 ************ ***** * ** ** * *************** ** ***** * consensus_13197#0 TGATTCAGTATGA----------------------------------------------- 2029 consensus_13197#1 TGATTCAGTATGAACCACGGCGTGCTGCCAGCACCNCCACTTGGAAAGGGTGAATAATTT 418 consensus_13197#2 TGANNCGGTATGAAACAGGCTGCTGCANCAACTGCATCTTGGAAAAAGGTNAAATGATCT 246 *** * ****** consensus_13197#0 ------------------------------------------------------------ consensus_13197#1 ATCATTTTTCCCTNCTTCTATNTCCCAAAAAAAATAAAATAAAAATATAAAATAAAAAAA 478 consensus_13197#2 ATCCATTTATCNCCTGCTTCATCTCCAANGAAACATCTGTACAANTTNGGTTAGGTGGTC 306 consensus_13197#0 ------------------------------------------------------------ consensus_13197#1 AAAAAAAAAAAANAACCCACCAAAAAAAAAA----------------------------- 509 consensus_13197#2 CTTACCTTCTGATCTTTGCCTNTGTTNGGGGCTTCTCTTTCCTATGCCNNNCCGGTNTGT 366 consensus_13197#0 -------------------------- consensus_13197#1 -------------------------- consensus_13197#2 GGTGGANAAGGACAGTTTGTAACCTG 392 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||