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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13219#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2048 fasta sequence
[CGCAGCACTCGCAGGAGAGGATCGAGTTAACCAAGTACGAAGCGAGTAGTTAGCGGGCGAGTACGTGGTGTTTGTCATGGAGGACGAGGCGACGTCGGTGGCGGCGCCGCTGCTGCGGCCGCGCGGCGGCGTTGACGCGGAGGCGGTGAAGCAGCAGCTGTGGCCGGCCGGCGCGAGGGTGGCGGGGGAGTGGTGGGTGGAGTCGAAGAAGCTGTGGCGCGTCGTCGGGCCGGCCATCTTCCAGCGGATCGCGCTGTACGGGATCAACGTCGTCTCGCAGGCGTTCATCGGCCACATGGGCGACCTCGAGCTTGCCGCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTCAACTTCGGTTTCCTGCTGGGCATGGCGAGCGCGCTGGAGACGCTGTGCGGGCAGGCGTTCGGCGCCAAGAAGTACCACATGCTGGGCGTGTACCTGCAGCGGTCGTGGCTGGTGCTCCTCATGTTCGCCGTCGCGCTGACGCCGACGTACGTGCTCATGGAGGACCTGCTGCTGCTGATCGGGCAGCCGGCCGACCTCGCCAGCCTCGCCGGCAAGATGAGCGTCTGGCTGCTGCCGCAGCACTTCGCCATGGCGATGCTGCTCCCGCTCACGCGGTTCCTGCAGTCCCAGCTCAAGAACTGGGTCACCGCGGTCACCGCCGGCGTCGCGCTCGCGCTCCACCTCGTGATCACCTACCTGCTCGTCAACACCCTCCACCTGGGCCTCCTCGGCGCCGTCGCCGCCGCCAACGTGGCGTGGTGGATCGTCGTGCTGGGGCAGTTGGTCTACGTCGTCGGCGGCTGGTGCCCGCTGTCGTGGAAGGGATTCTCCATGGAAGCGTTCGCCGACTTCTGGGAGTTCATCAAGCTCTCCTCGGCCTCCGGGGTGATGCTTTGCTTGGAGAACTGGTACTACAGGGTGTTGGTGTTGCTTACAGGGTACCTGAATAACGCTGAAATCGCTGTGGATGCACTCTCCATATGCTTGACGATCAACGGATGGGAGATGATGATTCCTTTTGGCTTCTTGGCTGCAACTGGCGTGCGGGTGGCAAACGAGCTCGGCGCCGGCAGCGGCAAGGGCGCGCGGTTCGCCATCGTGGTGTCCGTCACCACCTCCGTGGCGATCGGCCTCGTCTTCTGGTGCCTCATCATTGCCTACAACGACAAGATCGCTCTCCTCTTCTCGTCGAGCAAGGTGGTGCTCGACGCCGTCAGCGACCTGTCCGTGCTGCTCGCCTTCACCGTCCTCCTCAACAGCGTGCAGCCCGTCCTCTCAGGTGTGGCCATTGGCTCAGGGTGGCAAGCACTCGTAGCCTACGTCAACGTCGGTAGCTACTACTTGGTCGGAGTTCCCATCGGTGCCATATTGGGCTGGCCATTGCATTTCGGAG-TTGGGGGAATTTGGTCCGGGTTGATTGGTGGCACAGCTGTTCAGACACTG-ATATTAG-CCTATCTC-ACTATC-AGCTG-TGA--TTGGG-ATG-AAG--AGGCAAAG--AAAG-CAAG-TAC-AAGG-ATGG-AAGTATGGG---CCAGCT--CAAAA-TG-AAGC-AACCAAGTACCAACAGTGTGTTGGTGAGGTTTCTTGGACACACAAAGGGGGCACTTCAGTGGGCAGCAGAAGAACCGCAACTTCTGCTCAGTACAAAGAGGCAAACCATCAGAATAGATCAAGAAGACGAGAACATTTTGGAAGGCATAGCTGGTGTTTCACATATAGACATATTCACGTTACCTTAGGCTGCAGACAGCCAGTTTCTGAAGACGCTCGTTTGCCAAGAGAACATTGGAGAAGAGTGCAGAGGCTTGCGTAGGGTGATAGTATGTGTGAGTTGGGATTATATTTATTAGCCTTGTAACCTGAAATTTGCACTCGGTTGCAAGTTGCGACATGTAAGCACTGAGTATACTATTTAATGGATATTGCAACTGCAAGCCTGTGTGTTGTTCGCGGATTGTAAGACGTCCGGACACTACAAAATGGGCCAGACGGTAGCCCATTACCATCGTGTATGATATATATGCACCGAAACGAATCCACTCCTACGGTC]
[+] EMBL AK067748 [CGCAGCACTCGCAGGAGAGGATCGAGTTAACCAAGTACGAAGCGAGTAGTTAGCGGGCGAGTACGTGGTGTTTGTCATGGAGGACGAGGCGACGTCGGTGGCGGCGCCGCTGCTGCGGCCGCGCGGCGGCGTTGACGCGGAGGCGGTGAAGCAGCAGCTGTGGCCGGCCGGCGCGAGGGTGGCGGGGGAGTGGTGGGTGGAGTCGAAGAAGCTGTGGCGCGTCGTCGGGCCGGCCATCTTCCAGCGGATCGCGCTGTACGGGATCAACGTCGTCTCGCAGGCGTTCATCGGCCACATGGGCGACCTCGAGCTTGCCGCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTCAACTTCGGTTTCCTGCTGGGCATGGCGAGCGCGCTGGAGACGCTGTGCGGGCAGGCGTTCGGCGCCAAGAAGTACCACATGCTGGGCGTGTACCTGCAGCGGTCGTGGCTGGTGCTCCTCATGTTCGCCGTCGCGCTGACGCCGACGTACGTGCTCATGGAGGACCTGCTGCTGCTGATCGGGCAGCCGGCCGACCTCGCCAGCCTCGCCGGCAAGATGAGCGTCTGGCTGCTGCCGCAGCACTTCGCCATGGCGATGCTGCTCCCGCTCACGCGGTTCCTGCAGTCCCAGCTCAAGAACTGGGTCACCGCGGTCACCGCCGGCGTCGCGCTCGCGCTCCACCTCGTGATCACCTACCTGCTCGTCAACACCCTCCACCTGGGCCTCCTCGGCGCCGTCGCCGCCGCCAACGTGGCGTGGTGGATCGTCGTGCTGGGGCAGTTGGTCTACGTCGTCGGCGGCTGGTGCCCGCTGTCGTGGAAGGGATTCTCCATGGAAGCGTTCGCCGACTTCTGGGAGTTCATCAAGCTCTCCTCGGCCTCCGGGGTGATGCTTTGCTTGGAGAACTGGTACTACAGGGTGTTGGTGTTGCTTACAGGGTACCTGAATAACGCTGAAATCGCTGTGGATGCACTCTCCATATGCTTGACGATCAACGGATGGGAGATGATGATTCCTTTTGGCTTCTTGGCTGCAACTGGCGTGCGGGTGGCAAACGAGCTCGGCGCCGGCAGCGGCAAGGGCGCGCGGTTCGCCATCGTGGTGTCCGTCACCACCTCCGTGGCGATCGGCCTCGTCTTCTGGTGCCTCATCATTGCCTACAACGACAAGATCGCTCTCCTCTTCTCGTCGAGCAAGGTGGTGCTCGACGCCGTCAGCGACCTGTCCGTGCTGCTCGCCTTCACCGTCCTCCTCAACAGCGTGCAGCCCGTCCTCTCAGGTGTGGCCATTGGCTCAGGGTGGCAAGCACTCGTAGCCTACGTCAACGTCGGTAGCTACTACTTGGTCGGAGTTCCCATCGGTGCCATATTGGGCTGGCCATTGCATTTCGGAG TTGGGGGAATTTGGTCCGGGTTGATTGGTGGCACAGCTGTTCAGACACTG ATATTAG CCTATCTC ACTATC AGCTG TGA TTGGG ATG AAG AGGCAAAG AAAG CAAG TAC AAGG ATGG AAGTATGGG CCAGCT CAAAA TG AAGC AACCAAGTACCAACAGTGTGTTGGTGAGGTTTCTTGGACACACAAAGGGGGCACTTCAGTGGGCAGCAGAAGAACCGCAACTTCTGCTCAGTACAAAGAGGCAAACCATCAGAATAGATCAAGAAGACGAGAACATTTTGGAAGGCATAGCTGGTGTTTCACATATAGACATATTCACGTTACCTTAGGCTGCAGACAGCCAGTTTCTGAAGACGCTCGTTTGCCAAGAGAACATTGGAGAAGAGTGCAGAGGCTTGCGTAGGGTGATAGTATGTGTGAGTTGGGATTATATTTATTAGCCTTGTAACCTGAAATTTGCACTCGGTTGCAAGTTGCGACATGTAAGCACTGAGTATACTATTTAATGGATATTGCAACTGCAAGCCTGTGTGTTGTTCGCGGATTGTAAGACGTCCGGACACTACAAAATGGGCCAGACGGTAGCCCATTACCATCGTGTATGATATATATGCACCGAAACGAATCCACTCCTACGGTC]
[+] EMBL CB618098 [ GTCGGGCCGGCCATCTTCCAGCGGATCGCGCTGTACGGGATCAACGTCGTCTCGCAGGCGTTCATCGGCCACATGGGCGACCTCGAGCTTGCCGCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTCAACTTCGGTTTCCTGCTGGGCATGGCGAGCGCGCTGGAGACGCTGTGCGGGCAGGCGTTCGGCGCCAAGAAGTACCACATGCTGGGCGTGTACCTGCAGCGGTCGTGGCTGGTGCTCCTCATGTTCGCCGTCGCGCTGACGCCGACGTACGTGCTCATGGAGGACCTGCTGCTGCTGATCGGGCAGCCGGCCGACCTCGCCAGCCTCGCCGGCAAGATGAGCGTCTGGCTGCTGCCGCAGCACTTCGCCATGGCGATGCTGCTCCCGCTCACGCGGTTCCTGCAGTCCCAGCTCAAGAACTGGGTCACCGCGGTCACCGCCGGCGTCGCGCTCGCGCTCCACCTCGTGATCACCTACCTGCTCGTCAACACCCTCCACCTGGGCCTCCTCGGCGCCGTCGCCGCCGCCAACGTGGCGTGGTGGATCGTCGTGCTGGGGCAGTTGGTCTACGTCGTCGGCGGCTGGTGCCCGCTGTCGTGGAAGGGATTCTCCATGGAAGCGTTCGCCGACTTCTGGGAGTTCATCAAGCTCTCCTCGGCCTCCGGGGTGATGCTTTGCTTGGAGAACTGGTACTACAGGGTGTTGGTGTTGCTTACAGGGTACCTGAATAACGCTGAAATCGCTGTGGATGCACTCTCCATATGGTTcttg ]
[+] EMBL AA754133 [ GTGCCTCATCATTGCCTACAACGACAAGATCGCTCTCCTCTTCTCGTCGAGCAAGGTGGTGCTCGACGCCGTCAGCGACCTGTCCGTGCTGCTCGCCTTCACCGTCCTCCTCAACAGCGTGCAGCCCGTCCTCTCAGGTGTGGCCATTGGCTCAGGGTGGCAAGCACTCGTAGCCTACGTCAACGTCGGTAGCTACTACTTGGTCGGAGTTCCCATCGGTGCCATATTGGGCTGGCCATTGCATTTCGGAGTTTGGGGGAATTTGGTCCGGGTTGATTGGTGGCACAGCTGTTCAGACACTGAATATTAGCCCTATCTCAACTATCAAGCTGTTGAATTTGGGAATGAAAGAAAGGCAAAGAAAAAGCCAAGTTACAAAGGAATGGAAATTATGGGGGCCCAGCTTCCAAAATTGAAAGCAAACCAAatttacc ]
[-] EMBL CB684032 [ TACAACGACAAGATCGCTCTCCTCTTCTCGTCGAGCAAGGTGGTGCTCGACGCCGTCAGCGACCTGTCCGTGCTGCTCGCCTTCACCGTCCTCCTCAACAGCGTGCAGCCCGTCCTCTCAGGTGTGGCCATTGGCTCAGGGTGGCAAGCACTCGTAGCCTACGTCAACGTCGGTAGCTACTACTTGGTCGGAGTTCCCATCGGTGCCATATTGGGCTGGCCATTGCATTTCGGAG TTGGGGGAATTTGGTCCGGGTTGATTGGTGGCACAGCTGTTCAGACACTG ATATTAG CCTATCTC ACTATC AGCTG TGA TTGGG ATG AAG AGGCAAAG AAAG CAAG TAC AAGG ATGG AAGTATGGG CCAGCT CAAAA TG AAGC AACCAAGTACCAACAGTGTGTTGGTGAGGTTTCTTGGACACACAAAGGGGGCACTTCAGTGGGCAGCAGAAGAACCGCAACTTCTGCTCAGTACAAAGAGGCAAACCATCAGAATAGATCAAGAAGACGAGAACATTTTGGAAGGCATAGCTGGTGTTTCACATATAGACATATTCACGTTACCTTAGGCTGCAGACAGCCAGTTTCTGAAGACGCTCGTTTGCCAAGAGAACATTGGAGAAGAGTGCAGAGGCTTGCGTAGGGTGATAGTATGTGTGAGTTGGGATTATATTTATTAGCCTTGTAACCTGAAATTTGCACTCGGTTGCAAGTTGCGACATGTAAGCGGGGAGTATACTATTTAATGGATATTGCAACTG ]
[+] EMBL CB685816 [ AGGCATAGCTGGTGTTTCACATATAGACATATTCACGTTACCTTAGGCTGCAGACAGCCAGTTTCTGAAGACGCTCGTTTGCCAAGAGAACATTGGAGAAGAGTGCAGAGGCTTGCGTAGGGTGATAGTATGTGTGAGTTGGGATTATATTTATTAGCCTTGTAACCTGAAATTTGCACTCGGTTGCAAGTTGCGACATGTAAGCACTGAGTATACTATTTAATGGATA ]
[-] EMBL AU165110 [ GCCAAGAGAACATTGGAGAAGAGTGCAGAGGCTTGCGTAGGGTGATAGTATGTGTGAGTTGGGATTAAATTTATTAGCCTTGTAACCTGAAAATTGCACTCGGTTGCAAGTTGCGACATGTAAGCACTGAGTATACAATTTTATGGAAATTGCAACTGCAAaaaa ]
consensusID : consensus_13219#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 811 fasta sequence
[TTGTGGTCTTTTAGCTGGGCATGGCGAGCGCGCTGGAGACGCTGTGCGGGCAGGCGTTCGGCGCCAAGAAGTACCACATGCTGGGCGTGTACCTGCAGCGGTCGTGGCTGGTGCTCCTCATGTTCGCCGTCGCGCTGACGCCGACGTACGTGCTCATGGAGGACCTGCTGCTGCTGATCGGGCAGCCGGCCGACCTCGCCAGCCTCGCCGGCAAGATGAGCGTCTGGCTGCTGCCGCAGCACTTCGCCATGGCGATGCTGCTCCCGCTCACGCGGTTCCTGCAGTCCCAGCTCAAGAACTGGGTCACCGCGGTCACCGCCGGCGTCGCGCTCGCGCTCCACCTCGTGATCACCTACCTGCTCGTCAACACCCTCCACCTGGGCCTCCTCGGCGCCGTCGCCGCCGCCAACGTGGCGTGGTGGATCGTCGTGCTGGGGCAGTTGGTCTACGTCGTCGGCGGCTGGTGCCCGCTGTCGTGGAAGGGATTCTCCATGGAAGCGTTCGCCGACTTCTGGGAGTTCATCAAGCTCTCCTCGGCCTCCGGGGTGATGCTTTGCTTGGAGAACTGGTACTACAGGGTGTTGGTGTTGCTTACAGGGTACCTGAATAACGCTGAAATCGCTGTGGATGCACTCTCCATATGCTTGACGATCAACGGATGGGAGATGATGATTCCTTTTGGCTTCTTGGCTGCAACTGGCGTGCGGGTGGCAAACGAGCTCGGCGCCGGCAGCGGCAAGGGCGCGCGGTTCGCCATCGTGGTGTCCGTCACCACCTCCGTGGCGATCGGCCTCGTCTTCTGGTGCCTCAT]
[+] EMBL CB684031 [TTGTGGTCTTTTAGCTGGGCATGGCGAGCGCGCTGGAGACGCTGTGCGGGCAGGCGTTCGGCGCCAAGAAGTACCACATGCTGGGCGTGTACCTGCAGCGGTCGTGGCTGGTGCTCCTCATGTTCGCCGTCGCGCTGACGCCGACGTACGTGCTCATGGAGGACCTGCTGCTGCTGATCGGGCAGCCGGCCGACCTCGCCAGCCTCGCCGGCAAGATGAGCGTCTGGCTGCTGCCGCAGCACTTCGCCATGGCGATGCTGCTCCCGCTCACGCGGTTCCTGCAGTCCCAGCTCAAGAACTGGGTCACCGCGGTCACCGCCGGCGTCGCGCTCGCGCTCCACCTCGTGATCACCTACCTGCTCGTCAACACCCTCCACCTGGGCCTCCTCGGCGCCGTCGCCGCCGCCAACGTGGCGTGGTGGATCGTCGTGCTGGGGCAGTTGGTCTACGTCGTCGGCGGCTGGTGCCCGCTGTCGTGGAAGGGATTCTCCATGGAAGCGTTCGCCGACTTCTGGGAGTTCATCAAGCTCTCCTCGGCCTCCGGGGTGATGCTTTGCTTGGAGAACTGGTACTACAGGGTGTTGGTGTTGCTTACAGGGTACCTGAATAACGCTGAAATCGCTGTGGATGCACTCTCCATATGCTTGACGATCAACGGATGGGAGATGATGATTCCTTTTGGCTTCTTGGCTGCAACTGGCGTGCGGGTGGCAAACGAGCTCGGCGCCGGCAGCGGCAAGGGCGCGCGGTTCGCCATCGTGGTGTCCGTCACCACCTCCGTGGCGATCGGCCTCGTCTTCTGGTGCCTCAT]
consensusID : consensus_13219#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 715 fasta sequence
[TATTGTCAGCCGTGCTTTGTTCAGTTCGCAGCGCTAGGAAGCATTCAGGAATTTGATGGCTCTCAATGGTTTCTTAGGATGATGAAAGTGAACCTATCAGAATATGGCATCCATCTTTTATTTTTTCTGCCATTTGTCTTCTAAGAAAGTGCTATGCTTTTCTGCATACTAATTTAGAAAAGGCACATGG-GCGCGTCGTCGGGCCGGCCATCTTCCAGCGGATCGCGCTGTACGGGATCAACGTCGTCTCGCAGGCGTTCATCGGCCACATGGGCGACCTCGAGCTTGCCGCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTCAACTTCGGTTTCCTGGTTGATGTGATGAAAAAGGACTGAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCTTATGAAATGCCCCGAGAGTTCTTTTATGCGCTGAGGTTCAGGAACAATCCAAGAACAGATGGAAATAGTTGGGTAGTTAATCGAGGATAAGTGATCCAATCACCCTAATCATCTTTCCTTTTGTAATTTTTGCAATTAATTATTTGCCCGGCGTAAAAGTTCTGTAATGACTAATGAATTAAGCCGGAAGTATCGTGTCGTAGCTGAGCACATGGATTGGGCGAATCAATGCTCTCT-GATCG-TGTCGCCTTCTGCTGCTGCAGTTATTGTTCTTTATGTTTGTCCCTGTCTGTGTCCCGACACTGACGCCGCCAC]
[+] EMBL BE039641 [TATTGTCAGCCGTGCTTTGTTCAGTTCGCAGCGCTAGGAAGCATTCAGGAATTTGATGGCTCTCAATGGTTTCTTAGGATGATGAAAGTGAACCTATCAGAATATGGCATCCATCTTTTATTTTTTCTGCCATTTGTCTTCTAAGAAAGTGCTATGCTTTTCTGCATACTAATTTAGAAAAGGCACATGGTGATAAAC TCGGGCCGGCCATCTTCCAGCGGATCGCGCTGTACGGGATCAACGTCGTCTCGCAGGCGTTCATCGGCCACATGGGCGACCTCGAGCTTGCCGCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTCAACTTCGGTTTCCTGGTTGATGTGATGAAAAAGGACTGAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCTTATGAAATGCCCCGAGAGTTCTTTTATGCGCTGAGGTTCAGGAACAATCCAAGAACAGATGGAAATAGTTGGGTAGTTAATCGAGGATAAGTGATCCAATCACCCTAATCATCTTTCCTTTTGTAATTTTTGCAATTAATTATTTGCCCGGCGTAAAAGTTCTGTAATGACTAATGAATTAAGCCGGAAGTATCGTGTCGTAGCTGAGCACATGGATTGGGCGAAT AATGCTCT ]
[+] EMBL AU081018 [ G GCGCGTCGTCGGGCCGGCCATCTTCCAGCGGATCGCGCTGTACGGGATCAACGTCGTCTCGCAGGCGTTCATCGGCCACATGGGCGACCTCGAGCTTGCCGCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTCAACTTCGGTTTCCTGGTTGATGTGATGAAAAAGGACTGAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCTTATGAAATGCCCCGAGAGTTCTTTTATGCGCTGAGGTTCAGGAACAATCCAAGAACAGATGGAAATAGTTGGGTAGTTAATCGAGGATAAGTGATCCAATCACCCTAATCATCTTTCCTTTTGTAATTTTTGCAATTAATTATTTGCCCGGCGTAAAAGTTCTGTAATGACTAATGAATTAAGCCGGAAGTATCGTGTCGTAGCTGAGCACATGGATTGGGCGAATCAATGCTCTCT GATCG TGTCGCCTTCTGCTGCTGCAGTTATTGTTCTTTATGTTTGTCCCTGTCTGTGTCCCGACACTGACGCCGCCAC]
[+] EMBL AU057063 [ G GCGCGTCGTCGGGCCGGCCATCTTCCAGCGGATCGCGCTGTACGGGATCAACGTCGTCTCGCAGGCGTTCATCGGCCACATGGGCGACCTCGAGCTTGCCGCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTCAACTTCGGTTTCCTGGTTGATGTGATGAAAAAGGACTGAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCTTATGAAATGCCCCGAGAGTTCTTTTATGCGCTGAGGTTCAGGAACAATCCAAGAACAGATGGAAATAGTTGGGTAGTTAATCGAGGATAAGTGATCCAATCACCCTAATCATCTTTCCTTTTGTAATTTTTGCAATTAATTATTTGCCCGGCGTAAAAGTTCTGTAATGACTAATGAATTAAGCCGGAAGTATCGTGTCGTAGCTGAGCACATGGATTGGGCGAATCAATGCTCTCTGGATCGCTGTCGCCTTCTGCTGCTGCAGTTATTGTTCTTTATGTTTGTCCCTGTCTGTGTCCCGACACTGACGCCG ]
consensusID : consensus_13219#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 667 fasta sequence
[GACCAGCGCGCAGCTTTGCCGCGGAAGAGTTGGAGGGAGCCGCCGCTCGCCGGAGATCATGGACTCGTTCTCGTCGCCGTCGTCGGCGGGGTCGACTGCGTCC-ACGGAGCATCTCATGGAACAGATCAAGGCCCAGCTCGCGCAGGCCTACGCGCAGGAGTTCCTCGAGACTGTTGGAAACAAATGCTTTGCAAAGTGTGTCACTAAACCAGGAACAAGCTTGAGTGGAAGTGAGAGTAGCTGCATATCACGGTGTGTTGATCGGTACA-TTGAGGCAACTGGTATTGTCAGCCGTGCTTTGTTCAGTTCACAGCGCTAGGAAGCATTCAGGAATTTGATGGCTCTCAATGGTTTCTTAGGATGATGAAAGTGAACCT-ATCAGAATATGGCATCCATCTTTTATTTTTTCTGCCATTTGTCTTCTAAGAAAGTGCTATGCTTTTCTGCATACTAATTTAGAAAAGGCACATGGTGATAAACCATAAATGTGCAATATTTTTGTATTTAAGTTCATGCAATTGTTCATGGTCTCTTTTCATCCTTTGATGGAGAAATGCACCAATGGATTTGTGTGCAGGCTATCATATGCCATCGCGGTTTGCAGCACTAAGTTCCCTGTAGACCTTGCTTGAAATTTGGGTTAACAATGGCACAGCTTCCCTGAAGC]
[+] EMBL AK063093 [GACCAGCGCGCAGCTTTGCCGCGGAAGAGTTGGAGGGAGCCGCCGCTCGCCGGAGATCATGGACTCGTTCTCGTCGCCGTCGTCGGCGGGGTCGACTGCGTCC ACGGAGCATCTCATGGAACAGATCAAGGCCCAGCTCGCGCAGGCCTACGCGCAGGAGTTCCTCGAGACTGTTGGAAACAAATGCTTTGCAAAGTGTGTCACTAAACCAGGAACAAGCTTGAGTGGAAGTGAGAGTAGCTGCATATCACGGTGTGTTGATCGGTACA TTGAGGCAACTGGTATTGTCAGCCGTGCTTTGTTCAGTTCACAGCGCTAGGAAGCATTCAGGAATTTGATGGCTCTCAATGGTTTCTTAGGATGATGAAAGTGAACCT ATCAGAATATGGCATCCATCTTTTATTTTTTCTGCCATTTGTCTTCTAAGAAAGTGCTATGCTTTTCTGCATACTAATTTAGAAAAGGCACATGGTGATAAACCATAAATGTGCAATATTTTTGTATTTAAGTTCATGCAATTGTTCATGGTCTCTTTTCATCCTTTGATGGAGAAATGCACCAATGGATTTGTGTGCAGGCTATCATATGCCATCGCGGTTTGCAGCACTAAGTTCCCTGTAGACCTTGCTTGAAATTTGGGTTAACAATGGCACAGCTTCCCTGAAGC]
[+] EMBL BI797775 [ tCGGGTTCGACTGCGTCCAACGGAGCATCTCATGGACCAGATCAA GCCCAGTTCGC CAGGCCTACGCGCAGGAGTTCCTCGAGACTGTTGGAAACAAATGCTTTGCAAAGTGTGTCACTAAACCAGGAACAAGCTTGAGTGGAAGTGAGAGTAGTTGCATATCACGGTGTGTTGATCGGTACATTTGAGGCAACTGGTATTGTCACCCGTGCTTTGTTCAGTTCGCAGCGCTAGGAAGCATTCAGGAATTTGATGGCTCTCAATGGTTTCTTAGGATGATGAAAGTGAACCTGATCAGAATATGGCATCCATCTTTTATTTTTTCTGCCATTTGTCTTCTAAGCAAGTGCTATGCTTTTCTGCATACTAATTTAGAAAAGGCACATGGTGATAAACCATAAATGTCCAATATTTTTGTATTTAAGTTCAT CAATTGTTCAT GTCTCTTTTCATCCTTTGATGGAGAAAT CACCAATGGATTTGTGT CAGGCTATCATGT CCATC CCGTTT CACCACTAAaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_13219#0 CGCAGCACTCGCAGGAGAGGATCGAGTTAACCAAGTACGAAGCGAGTAGTTAGCGGGCGA 60
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 GTACGTGGTGTTTGTCATGGAGGACGAGGCGACGTCGGTGGCGGCGCCGCTGCTGCGGCC 120
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 GCGCGGCGGCGTTGACGCGGAGGCGGTGAAGCAGCAGCTGTGGCCGGCCGGCGCGAGGGT 180
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 GGCGGGGGAGTGGTGGGTGGAGTCGAAGAAGCTGTGGCGCGTCGTCGGGCCGGCCATCTT 240
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 CCAGCGGATCGCGCTGTACGGGATCAACGTCGTCTCGCAGGCGTTCATCGGCCACATGGG 300
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 CGACCTCGAGCTTGCCGCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTCAACTTCGG 360
consensus_13219#1 ------------------------------------------------------TTGTGG 6
consensus_13219#2 ------------------------------------------------------TATTGT 6
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 TTTCCT-GCTGGGCATGGCGAGC-GCGCTGGAGACGCTGTGCGGGCAGGCGTTCGGCGCC 418
consensus_13219#1 TCTTTTAGCTGGGCATGGCGAGC-GCGCTGGAGACGCTGTGCGGGCAGGCGTTCGGCGCC 65
consensus_13219#2 CAGCCGTGCTTTGTTCAGTTCGCAGCGCTAGGAA--GCATTCAGGAATTTGATGGCTCTC 64
consensus_13219#3 ------------GACCAGCGCGCAGCTTTG------CCGCGGAAGAGTTGGA-GGGAGCC 41
* * ** ** * * * * *
consensus_13219#0 AAGAAGTACC--ACATGCTGGGCGTGTACCTGCAGCGGTCGTGGCTGGTGCTCCTCATGT 476
consensus_13219#1 AAGAAGTACC--ACATGCTGGGCGTGTACCTGCAGCGGTCGTGGCTGGTGCTCCTCATGT 123
consensus_13219#2 AATGGTTTCTTAGGATGATGAAAGTGAACCTATCA-GAATATGGCATCCATCTTTTATTT 123
consensus_13219#3 GCCGCTCGCCGGAGATCATGGACTCGTTCTCGTCGCCGTCGTCGGCGGGGTCGACTGCGT 101
* ** ** * * * * *
consensus_13219#0 TCGCCGTCGCGCTGACGCCGACGTACGTGCTCATGGAGGACCTGCTGC-TGCTGATCGGG 535
consensus_13219#1 TCGCCGTCGCGCTGACGCCGACGTACGTGCTCATGGAGGACCTGCTGC-TGCTGATCGGG 182
consensus_13219#2 TTTCTGCCAT-TTGTCTTCTAAGAAAGTGCT-----ATGCTTTTCTGCATACTAATTTAG 177
consensus_13219#3 ------CCACGGAGCATCTCATGGAACAGATCA---AGGCCCAGCT-CGCGCAGGCCTAC 151
* * * * * * * * * ** * *
consensus_13219#0 CAGCCGGCCGACCTCGCCAGCCTCGCCGGCAAGATGAGCGTCTGGCTGCTGCCGCAGCAC 595
consensus_13219#1 CAGCCGGCCGACCTCGCCAGCCTCGCCGGCAAGATGAGCGTCTGGCTGCTGCCGCAGCAC 242
consensus_13219#2 AAAA-GGC--ACATGGGC-GCGTCGTCGGGCCGGCCATCTTCCAGCGGATCGCGCTGTAC 233
consensus_13219#3 GCGCAGGAGTTCCTCGAGACTGTTG--GAAACAAATGCTTTGCAAAGTGTGTCACTAAAC 209
** * * * * * * * * * * **
consensus_13219#0 -TTCGCCATGGCGATGCTGCTCCCGCTCACGCGGTTCCTGCAGTCCCAGCTCAAGAACTG 654
consensus_13219#1 -TTCGCCATGGCGATGCTGCTCCCGCTCACGCGGTTCCTGCAGTCCCAGCTCAAGAACTG 301
consensus_13219#2 -GGGATCAACGTCGTCTCGCAGGCGTTCATCGGCCACATGGG---CGACCTCGAGCTTGC 289
consensus_13219#3 CAGGAACAAGCTTGAGTGGAAGTGA--GAGTAGCTGCAT--------ATCACG-GTGTGT 258
** * * * * * * * * *
consensus_13219#0 GGTCACCGCGGTCACCGCCGGCGTCGCGCTCGCGCTCCACCTCGTGATCACCTACCTGCT 714
consensus_13219#1 GGTCACCGCGGTCACCGCCGGCGTCGCGCTCGCGCTCCACCTCGTGATCACCTACCTGCT 361
consensus_13219#2 CGCCTTCTCCATCGCCTCCACCGTCGTCGCCGGCTTCAACTTC--GGTTTCCTGGTTGAT 347
consensus_13219#3 TGATCGGTACATTGAGGCAACTGGTATTGTCAGCCGTGCTTTG-------TTCAGTTCAC 311
* * * * * * *
consensus_13219#0 CGTCAACACCCTCCACCTGGGCCTCCTCGGCGCCGTCGCCGCCGCCAACGTGGCGTGGTG 774
consensus_13219#1 CGTCAACACCCTCCACCTGGGCCTCCTCGGCGCCGTCGCCGCCGCCAACGTGGCGTGGTG 421
consensus_13219#2 -GTGATGAAAAAGGACTGAAGTTTGGATCCAAACTTTG--GATCTAAACACAGCCTTATG 404
consensus_13219#3 AGCGCTAGGAAGCATTCAGGAATTTGAT--GGCTCTCAATGGTTT---CTTAGGATGATG 366
* * * * * * * **
consensus_13219#0 GATCGTCGTGCTGGGGCAGTTGGTCTACGTCGTCGGCGGCTGGTGCCCGCTGTCGTGGAA 834
consensus_13219#1 GATCGTCGTGCTGGGGCAGTTGGTCTACGTCGTCGGCGGCTGGTGCCCGCTGTCGTGGAA 481
consensus_13219#2 AA-----ATGCCCCGAGAGTTCTTTTATG-CGCTGAGGTTCAGGA---ACAATCCAAGAA 455
consensus_13219#3 AAAGTGAACCTATCAGAATATGGCATCCATCTTTTATTTTTTCTGCCATTTGTCTTCTAA 426
* * * * * ** **
consensus_13219#0 GGGATTCTCCATGGAAGCGTTCGCCGACTTCTGGGAGTTCATCAAGCTCTCCTCGGCCTC 894
consensus_13219#1 GGGATTCTCCATGGAAGCGTTCGCCGACTTCTGGGAGTTCATCAAGCTCTCCTCGGCCTC 541
consensus_13219#2 CAGATG------GAAATAGTTGGGTAGTTAATCGAGGATAAGTGATC------CAATCAC 503
consensus_13219#3 GAAAGTGC---TATGCTTTTCTGCATACTAATTTAGAAAAGGCACATGGTGATAAACCAT 483
* * * * * *
consensus_13219#0 CGGGGTG--ATGCTTTGCTTGGAGAACTGGTACTACAGGGTGTTGGTGTTGCTTACAGGG 952
consensus_13219#1 CGGGGTG--ATGCTTTGCTTGGAGAACTGGTACTACAGGGTGTTGGTGTTGCTTACAGGG 599
consensus_13219#2 CCTAATC--AT-CTTTCCTTTTGTAATTTTTGCAATTAATTATTTGCCCGGCGTA-AAAG 559
consensus_13219#3 AAATGTGCAATATTTTTGTATTTAAGTTCATGCAATTGTTCATGGTCTCTTTTCATCCTT 543
* ** *** * * * * * * * *
consensus_13219#0 TACCTGAATAACGCTGAAATCGCTGTGGATGCACTCTCCATATGCTTGACGATCA-ACGG 1011
consensus_13219#1 TACCTGAATAACGCTGAAATCGCTGTGGATGCACTCTCCATATGCTTGACGATCA-ACGG 658
consensus_13219#2 TTCTGTAATGACTAATGAATTAAGCCGGAAGTAT----CGTGTCGTAGCTGAGCACATGG 615
consensus_13219#3 TGATGGAGAAATGCACCAATGGATTTGTGTGCAG----GCTATCATATGCCATCG--CGG 597
* * * *** * * * * * * * * **
consensus_13219#0 ATGGGAGATGATGATTCCTTTTGGCT-TCTTGGCTGCAACTGGCGT-GCGGGTGGCAAAC 1069
consensus_13219#1 ATGGGAGATGATGATTCCTTTTGGCT-TCTTGGCTGCAACTGGCGT-GCGGGTGGCAAAC 716
consensus_13219#2 ATTGGGCGAATCAATGCTCTCTGATCGTGTCGCCTTCTGCTGCTGCAGTTATTGTTCTTT 675
consensus_13219#3 TTTGCAGCACTAAGTTCCCTGTAGAC--CTTGCTTGAAATT--TGG-GTTAACAATGGCA 652
* * * * * * * * * * * *
consensus_13219#0 GAGCTCGGCGCCGGCAGCGGCAAGGGCGCGCGGTTCGCCATCGTGGTGTCCGTCACCACC 1129
consensus_13219#1 GAGCTCGGCGCCGGCAGCGGCAAGGGCGCGCGGTTCGCCATCGTGGTGTCCGTCACCACC 776
consensus_13219#2 ATGTTTGTCCCTGTCTGTGTCCCGA-CACTGACGCCGCCAC------------------- 715
consensus_13219#3 CAGCTTCCCTGAAGC--------------------------------------------- 667
* * * *
consensus_13219#0 TCCGTGGCGATCGGCCTCGTCTTCTGGTGCCTCATCATTGCCTACAACGACAAGATCGCT 1189
consensus_13219#1 TCCGTGGCGATCGGCCTCGTCTTCTGGTGCCTCAT------------------------- 811
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 CTCCTCTTCTCGTCGAGCAAGGTGGTGCTCGACGCCGTCAGCGACCTGTCCGTGCTGCTC 1249
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 GCCTTCACCGTCCTCCTCAACAGCGTGCAGCCCGTCCTCTCAGGTGTGGCCATTGGCTCA 1309
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 GGGTGGCAAGCACTCGTAGCCTACGTCAACGTCGGTAGCTACTACTTGGTCGGAGTTCCC 1369
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 ATCGGTGCCATATTGGGCTGGCCATTGCATTTCGGAGTTGGGGGAATTTGGTCCGGGTTG 1429
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 ATTGGTGGCACAGCTGTTCAGACACTGATATTAGCCTATCTCACTATCAGCTGTGATTGG 1489
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 GATGAAGAGGCAAAGAAAGCAAGTACAAGGATGGAAGTATGGGCCAGCTCAAAATGAAGC 1549
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 AACCAAGTACCAACAGTGTGTTGGTGAGGTTTCTTGGACACACAAAGGGGGCACTTCAGT 1609
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 GGGCAGCAGAAGAACCGCAACTTCTGCTCAGTACAAAGAGGCAAACCATCAGAATAGATC 1669
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 AAGAAGACGAGAACATTTTGGAAGGCATAGCTGGTGTTTCACATATAGACATATTCACGT 1729
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 TACCTTAGGCTGCAGACAGCCAGTTTCTGAAGACGCTCGTTTGCCAAGAGAACATTGGAG 1789
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 AAGAGTGCAGAGGCTTGCGTAGGGTGATAGTATGTGTGAGTTGGGATTATATTTATTAGC 1849
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 CTTGTAACCTGAAATTTGCACTCGGTTGCAAGTTGCGACATGTAAGCACTGAGTATACTA 1909
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 TTTAATGGATATTGCAACTGCAAGCCTGTGTGTTGTTCGCGGATTGTAAGACGTCCGGAC 1969
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 ACTACAAAATGGGCCAGACGGTAGCCCATTACCATCGTGTATGATATATATGCACCGAAA 2029
consensus_13219#1 ------------------------------------------------------------
consensus_13219#2 ------------------------------------------------------------
consensus_13219#3 ------------------------------------------------------------
consensus_13219#0 CGAATCCACTCCTACGGTC 2048
consensus_13219#1 -------------------
consensus_13219#2 -------------------
consensus_13219#3 -------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||