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Oryza sativa
cluster # 13241 cluster # 13241       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13241#0 length = 1031 sequences # 3  
consensus_13241#1 length = 1009 sequences # 8  
consensus_13241#2 length = 155 sequences # 1  

consensusID : consensus_13241#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1031
fasta sequence
                              [AGCTCCTCTCCCTCCAAGGTTACTACTGCCAAATTCGTTACAGGGTTACGTGCATAATTCAGTGAAACTGTTTCGAGTTTCGACCATCTTCAGAGTTGTGATTGGTTAGCTGTTTAAGCATGCTAATTAATCTTGGCTTGCCGATGCAACTGGATGTGCAGCTAGGAGGAGGCGTCACCAGATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCACTTCCAGAAGGCGGCGACGACAGCGGCGGCCTTCCACCACAAGCCTCCCCCGGCCGAGCTGTCCCTTCGGCTCTCGCCGGCGAGGAGCAAGCATGCAAGAACGTGCCCGGCCGCCGACAACGACCGCGCGGCGCCCGCGGCACAGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAGCGCCAACGGCAGCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCACTGACGGCGCGGGAGCGGCTGCGCGCGGCGCGCGTGCTGGGCAAGTACGCGGAGCCGGGGGGCTCGTCTCCGAAGGGCAAGGCCTCGGCGGCGTCGGCGGCGGCGGCTGGGGCGGCAGGGAAGAAGCCGGAGTTCGGGAGCCGGGTGCTGGACGCGCTCCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCGGCTGCCCGAGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGTGGACGTTCGAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCTTCACACTCATCACCGTCGTCATGTTCGGCCCCACGTACCTCGTTTGGAAGCTCGGCGCCATTCACTTCAACGAGTTTTAGGCTACGTACTATCACTCACCCAATGAGCTCGCTAGATTTGTGGGTCTTTGGGTGATGAAATCGCGTTGGATTTGTAGCTGCCTTTTGCGGTGCTTTGATCAGATACTCGTGTGATATTGTACTGAACTGCCGGCTTTGGTTTTTAGGGTGGATTTTGGAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB628640             [AGCTCCTCTCCCTCCAAGGTTACTACTGCCAAATTCGTTACAGGGTTACGTGCATAATTCAGTGAAACTGTTTCGAGTTTCGACCATCTTCAGAGTTGTGATTGGTTAGCTGTTTAAGCATGCTAATTAATCTTGGCTTGCCGATGCAACTGGATGTGCAGCTAGGAGGAGGCGTCACCAGATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCACTTCCAGAAGGCGGCGACGACAGCGGCGGCCTTCCACCACAAGCCTCCCCCGGCCGAGCTGTCCCTTCGGCTCTCGCCGGCGAGGAGCAAGCATGCAAGAACGTGCCCGGCCGCCGACAACGACCGCGCGGCGCCCGCGGCACAGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAGCGCCAACGGCAGCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCACTGACGGCGCGGGAGCGGCTGCGCGCGGCGCGCGTGCTGGGCAAGTACGCGGAGCCGGGGGGCTCGTCTCCGAAGGGCAAGGCCTCGGCGGCGTCGGCGGCGGCGGCTGGGGCGGCAGGGAAGAAGCCGGAGTTCGGGAGCCGGGTGCTGGACGCGCTCCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCGGCTGCCCGAGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGTGGACGTTCGAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCT                                                                                                                                                                                                                                                                       ]
[-] EMBL CB628641             [                                                                                                                                                                                                                                                                                          AGCTGTCCCTTCGGCTCTCGCCGGCGAGGAGCAAGCATGCAAGAACGTGCCCGGCCGCCGACAACGACCGCGCGGCGCCCGCGGCACAGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAGCGCCAACGGCAGCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCACTGACGGCGCGGGAGCGGCTGCGCGCGGCGCGCGTGCTGGGCAAGTACGCGGAGCCGGGGGGCTCGTTTCCGAAGGGCAAGGCCTCGGCGGCGTCGGCGGCGGCGGCTGGGGCGGCAGGGAAGAAGCCGGAGTTCGGGAGCCGGGTGCTGGACGCGCTCCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCGGCTGCCCGAGGCGCCGAGCAACATGTTTGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGTGGACGTTCGAGGCGCTGCCGTTCGGCCCCGACGTGATCGTCATCGCCGCCTCCTTCACACTCATCACCGTCGTCATGTTCGGCCCCACGTACCTCGTTTGGAAGCTCGGCGCCATTCACTTCAACGAGTTTTAGGCTACGTACTATCACTCACCCAATGAGCTCGCTAGATTTGTGGGTCTTTGGGTGATGAAATCGCGTTGGATTTGTAGCTGCCTTTTGCGGTGCTTTGATCAGATACTCGTGTGATATTGTACTGAACTGCCGGCTTTGGTTTTTAGGGT                                  ]
[+] EMBL AU094295             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGGCTGCCCGAGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGTGGACGTTCNAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCTTCACGCTCATCACCGTCGTCATGTTCGGCACCACGTACCTCGTCTGGAAGCTCGGCGCCATTCACTTCAACGAGTTNTAGGCTACGTACTATCACTCACACAATGAGCTCGCTANATTTGTGGGTCTTTGGGTGATGAAATCGCGTTGGATTTGTANCTGCCTTTTGCGGTGCTTTGATCANATACTCGTGTGATATTGTACTGAACTGCCGGCTTTGGTTTTAAGGGTGGATTTTGGAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13241#0 AGCTCCTCTCCCTCCAAGGTTACTACTGCCAAATTCGTTACAGGGTTACGTGCATAATTC AGTGAAACTGTTTCGAGTTTCGACCATCTTCAGAGTTGTGATTGGTTAGCTGTTTAAGCA TGCTAATTAATCTTGGCTTGCCGATGCAACTGGATGTGCAGCTAGGAGGAGGCGTCACCA GATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCACTTCCAGAAGGCGG CGACGACAGCGGCGGCCTTCCACCACAAGCCTCCCCCGGCCGAGCTGTCCCTTCGGCTCT CGCCGGCGAGGAGCAAGCATGCAAGAACGTGCCCGGCCGCCGACAACGACCGCGCGGCGC CCGCGGCACAGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAGCGCCAACGGCA GCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCACTGACGGCGCGGGAGCGGCTGCGCGCGG CGCGCGTGCTGGGCAAGTACGCGGAGCCGGGGGGCTCGTCTCCGAAGGGCAAGGCCTCGG CGGCGTCGGCGGCGGCGGCTGGGGCGGCAGGGAAGAAGCCGGAGTTCGGGAGCCGGGTGC TGGACGCGCTCCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCGGCTGCCCG AGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGTGGACGT TCGAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCTTCACACTCATCA CCGTCGTCATGTTCGGCCCCACGTACCTCGTTTGGAAGCTCGGCGCCATTCACTTCAACG AGTTTTAGGCTACGTACTATCACTCACCCAATGAGCTCGCTAGATTTGTGGGTCTTTGGG TGATGAAATCGCGTTGGATTTGTAGCTGCCTTTTGCGGTGCTTTGATCAGATACTCGTGT GATATTGTACTGAACTGCCGGCTTTGGTTTTTAGGGTGGATTTTGGAAAAAAAAAAAAAA AAAAAAAAAAA



consensusID : consensus_13241#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1009
fasta sequence
                              [ATCTCCATTGTCATCGGCATCAAAACTCTGCAGTCGCTGTGGCCAAGCAGATGAGCCGAAGATGGCTGCC-ACCACCTTCAGCTCCTCTCCCTCCAAGGTTACTACTGCCAAACTAGGAGGAGGCGTCACCAGATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCACTTCCAGAAGGCGGCGACGACAGCG-GCGGCCTTCCACCACAAGCCTCCCCCGGCCGAGCTGTCCCTTCTGCTCTCGCCGGCGAGGAGCAAGCATGC-AAGAACGTGCCCGGCCGCCGACAACGACCGCGCGGCGCCCGCGGCAC-AGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAGCGCCAACGGCAGCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCACTGACGGCGCGGGAGCGGCTGCGCGC-GGCGCGCGT-GCTGGGCAAGTACGCGGAGCCTGGGGGCTCGTCTCCGAAGGGCAAGGCCTCGGCGGCGTCGGCGGCGGCTGGGGCGGCAGGGAAGAAGCCGGAGTTCGGGAGCCGGGTGCTGGACGCGCT-CCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCGGCTGCCCGAGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGTGGACGTTCGAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCTTCACGCTCATCACCGTCGTCATGTTCGGCACCACGTACCTCGTCTGGAAGCTCGGCGCCATTCACTTCAACGAGTTCTAGGCTACGTACTATCACTCACACAATGAGCTCGCTAGATTTGTGGGTCTTTGGGTGATGAAATCGCGTTGGATTTGTAGCTGCCTTTTGCGGTGCTTTGATCAGATACTCGTGTGATATTGTACTGAACTGCCGGCTTTGGTTTTAAGGGTGGATTTTGGAAAAACGTTGTACGAATCGATAGTTTACTTAATATAGTTATTATTCTACTAAAAA]

[+] EMBL AK060680             [ATCTCCATTGTCATCGGCATCAAAACTCTGCAGTCGCTGTGGCCAAGCAGATGAGCCGAAGATGGCTGCC ACCACCTTCAGCTCCTCTCCCTCCAAGGTTACTACTGCCAAACTAGGAGGAGGCGTCACCAGATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCACTTCCAGAAGGCGGCGACGACAGCG GCGGCCTTCCACCACAAGCCTCCCCCGGCCGAGCTGTCCCTTCTGCTCTCGCCGGCGAGGAGCAAGCATGC AAGAACGTGCCCGGCCGCCGACAACGACCGCGCGGCGCCCGCGGCAC AGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAGCGCCAACGGCAGCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCACTGACGGCGCGGGAGCGGCTGCGCGC GGCGCGCGT GCTGGGCAAGTACGCGGAGCCTGGGGGCTCGTCTCCGAAGGGCAAGGCCTCGGCAGCGTCGGCGGCGGCTGGGGCGGCAGGGAAGAAGCCGGAGTTCGGGAGCCGGGTGCTGGACGCGCT CCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCGGCTGCCCGAGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGTGGACGTTCGAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCTTCACGCTCATCACCGTCGTCATGTTCGGCACCACGTACCTCGTCTGGAAGCTCGGCGCCATTCACTTCAACGAGTTCTAGGCTACGTACTATCACTCACACAATGAGCTCGCTAGATTTGTGGGTCTTTGGGTGATGAAATCGCGTTGGATTTGTAGCTGCCTTTTGCGGTGCTTTGATCAGATACTCGTGTGATATTGTACTGAACTGCCGGCTTTGGTTTTAAGGG                                                                 ]
[+] EMBL C73377               [                              CAGTCGCTGTGGCCAAGCAGATGAGCCGAAGATGGCTGCC ACCACCTTCAGCTCCTNTCCCTCCAAGGTTACTACTGCCAAACTAGGAGGAGGCGTCACCAGATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCACTTCCAGAAGGCGGCGACGACAGCG GCGGCCTTCCACCACAAGCNTCCCCCGGCCGAGCTGTCCCTTCTGCTCTCGCCGGCGAGGAGCAAGCATGCAAAGAACGTGCCCGGCCGCCGACAACGACCGCGCGGCGCCCGGGGCAC AGGAAGCAACAAACACGNCTCCGCNGCCGGCCGCGNCCAGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF325909             [                                                                 CTGCC ACCACCTTCAGCTCCTCTCCCTCCAAGGTTACTACTGCCAAACTAGGAGGAGGCGTCACCAGATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCACTTCCAGAAGGCGGCGACGACAGCGTGTGTTCTTCCACCACAAGCCTCCCCCGGCCGAGCTGTCCCTTCTGCTCTCGCCGGCGAGGAGCAAGCATGC AAGAACGTGCCCGGCCGCCGACAACGACCGCGCGGCGCCCGCGGCAC AGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAGCGCCAACGGCAGCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCACTGACGGCGCGGGAGCGGCTGCGCGC GGCGCGCGT GCTGGGCAAGTACGCGGAGCCTGGGGGCTCGTCTCCGAAGGGCAAGGCCTCGGCGGCGTCGGCGGCGGCTGGGGCGGCAGGGAAGAAGCCGGAGTTCGGGAGCCGGGTGCTGGACGCGCT CCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCGGCTGCCCGAGGCGCCGAGCAACATGTTCGACGACAG                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OSC169               [                                                              ncntnGCCNACCACCTTCAGCTCCTCTCCCTCCAAGGTTACTACTGCCAAACTAGGAGGAGGCGTCACCAGATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCACTTCCAGAAGGCGGCGACGACAGCG GCGGCCTTCCACCACAAGCCTCCCCCNGCCGAGCTGTCCCTTCTGCTCTCNCCGGCGAGGAGCAAGCATGC AAGAACGTNCCCGGCCGCCGACAACGACCGCGCNGCGCCC TGGCACAAGGAAGCAACAAACACGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C72066               [                                                                       ACCACCTTCAGCTCCTNTCCCTCCAAGGTTACTACTGCCAAACTAGGAGGNGGCGTCACCAGATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCANTTCCAGAAGGCGGCGACGACAGCG GCGGCCTTCCACCACAAGCNTCCCCCGGCCGAGCTGTCCCTTCTNCTCTCGCCGGCGAGGAGCAAGCATGC AAGAACGTGCCCGGCCGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU162734             [                                                                               CAGCTCCTCTCCCTCCAAGGTTACTACTGCCAAACTAGGAGGAGGCGTCACCAGATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCACTTCCAGAAGGCGGCGACGACAGCG GCGGCCTTCCACCACAAGCCTCCCCCGGCCGAGCTGTCCCTTCTGCTCTCGCCGGCGAGGAGCAAGCATGC AAGAACGTGCCCGGCCGCCGACAACGACCGCGCGGCGCCCGCGGCAC AGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAGCGCCAACGGCAGCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCANTGANGGCGCGGGAGGGGCTGCGCGCGGGCGCG GTGGCTGGGCAAGTACGCGGAGCCTGGGGGCTCGTCTCCGAAGGGCAAGGCCTCGGCGGCGTCGGCGGCGGNTGGGGCGGCANGGAAGAAGCCGGAGTTCGGGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU057080             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGACGCGCTCCCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCGGCTGCCCGAGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGTGGACGTTCGAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCTTCACGCTCATCACCGTCGTCATGTTCGGCACCACGTACCTCGTCTGGAAGCTCGGCGCCATTCACTTCAACGAGTTCTAGGCTACGTACTATCACTCACACAATGAGCTCGCTAGATTTGTGGGTCTTTGGGTGATGAAATCGCGTTGGATTTGTAGCTGCCTTTTGCGGTGCTTTGATCAGATACTCGTGTGATATTGTACTGAACTGCCGGCTTTGGTTTTAAGGGTGGATTTTGGAAAAA                                                  ]
[+] EMBL AU094357             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGGACGGGAAGGCCGGGAAGAANCGGTCGTCGCGGCTGCCCGAGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGTGGACGTTCGAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCTTCACGCTCATCACCGTCGTCATGTTCGGCACCACGTACCTCGTCTGGAAGCTCGGCGCCATTCACTTCAACGAGTTCTAGGCTACGTACTATCACTCACACAATGAGCTCGCTAGATTTGTGGGTCTTTGGGTGATGAAATCGCGTTGGATTTGTAGCTGCCTTTTGCGGTGCTTTGATCAGATACTCGTGTGATATTGTACTGAACTGCCGGCTTTGGTTTTAAGGGTGGATTTTGGAACATCGTTGTACGAATCGATAGTTTACTTAATATAGTTATTATTCTACTAAAAA]


>consensus_13241#1 ATCTCCATTGTCATCGGCATCAAAACTCTGCAGTCGCTGTGGCCAAGCAGATGAGCCGAA GATGGCTGCCACCACCTTCAGCTCCTCTCCCTCCAAGGTTACTACTGCCAAACTAGGAGG AGGCGTCACCAGATCTTCCTCGCCATACACGCAGCTCACCTTCTGCTCGAGGCATCACTT CCAGAAGGCGGCGACGACAGCGGCGGCCTTCCACCACAAGCCTCCCCCGGCCGAGCTGTC CCTTCTGCTCTCGCCGGCGAGGAGCAAGCATGCAAGAACGTGCCCGGCCGCCGACAACGA CCGCGCGGCGCCCGCGGCACAGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAG CGCCAACGGCAGCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCACTGACGGCGCGGGAGCG GCTGCGCGCGGCGCGCGTGCTGGGCAAGTACGCGGAGCCTGGGGGCTCGTCTCCGAAGGG CAAGGCCTCGGCGGCGTCGGCGGCGGCTGGGGCGGCAGGGAAGAAGCCGGAGTTCGGGAG CCGGGTGCTGGACGCGCTCCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCG GCTGCCCGAGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGG GTGGACGTTCGAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCTTCAC GCTCATCACCGTCGTCATGTTCGGCACCACGTACCTCGTCTGGAAGCTCGGCGCCATTCA CTTCAACGAGTTCTAGGCTACGTACTATCACTCACACAATGAGCTCGCTAGATTTGTGGG TCTTTGGGTGATGAAATCGCGTTGGATTTGTAGCTGCCTTTTGCGGTGCTTTGATCAGAT ACTCGTGTGATATTGTACTGAACTGCCGGCTTTGGTTTTAAGGGTGGATTTTGGAAAAAC GTTGTACGAATCGATAGTTTACTTAATATAGTTATTATTCTACTAAAAA



consensusID : consensus_13241#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 155
fasta sequence
                              [GTCCACCTGAGCAGAGAGTATAGCATATCGTGCCTAAACCTAACGCGAAGCGCTAGTGCAGCTCTACCTAGATTCTTCCTCGCCATACATCGCTAGCTCACCTTCTGCTCGAGGCATCACTTCAGTAAGGTCGGCGAGCACAGCGGCGGCCTTCC]

[+] EMBL AA749789             [GTCCACCTGAGCAGAGAGTATAGCATATCGTGCCTAAACCTAACGCGAAGCGCTAGTGCAGCTCTACCTAGATTCTTCCTCGCCATACATCGCTAGCTCACCTTCTGCTCGAGGCATCACTTCAGTAAGGTCGGCGAGCACAGCGGCGGCCTTCC]


>consensus_13241#2 GTCCACCTGAGCAGAGAGTATAGCATATCGTGCCTAAACCTAACGCGAAGCGCTAGTGCA GCTCTACCTAGATTCTTCCTCGCCATACATCGCTAGCTCACCTTCTGCTCGAGGCATCAC TTCAGTAAGGTCGGCGAGCACAGCGGCGGCCTTCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13241#0      AGCTCCTCTCCCTCCAAGGTTACTACTGCCAAATTCGTTACAGGGTTACGTGCAT-AATT 59
consensus_13241#1      -----------------------------------ATCTCCATTGTCATCGGCATCAAAA 25
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      CAGTGAAACTGTTTCGAGTTTCGACCATCTTCAGAGTTGTGATTGGTTAGCTGTTTAAGC 119
consensus_13241#1      CTCTGCAGTCGCTGTGG---CCAAGCAGAT---GAGCCGAAGATGGCTGCC------ACC 73
consensus_13241#2      --------------------------------------------GTCCACCTG----AGC 12
                                                                   *     *      * *

consensus_13241#0      ATGCTAATTAATCTTGGCTTGCCGATGCAACTGGATGTGCAGCTAGGAGGAGGCGTCACC 179
consensus_13241#1      ACCTTCAGC--TCCTCTCCCTCCAAGGTTACTAC-TGCCAAACTAGGAGGAGGCGTCACC 130
consensus_13241#2      AGAGAGTATA-GCATATCGTGCCTA---AACCTAACGCGAAGCGCTAGTGCAGCTCTACC 68
                       *           * *  *   ** *    **     *   * *      *  **   ***

consensus_13241#0      -AGAT-CTTCCTCGCCATACA-CGC-AGCTCACCTTCTGCTCGAGGCATCACTTCCAGAA 235
consensus_13241#1      -AGAT-CTTCCTCGCCATACA-CGC-AGCTCACCTTCTGCTCGAGGCATCACTTCCAGAA 186
consensus_13241#2      TAGATTCTTCCTCGCCATACATCGCTAGCTCACCTTCTGCTCGAGGCATCACTTCAGTAA 128
                        **** *************** *** *****************************   **

consensus_13241#0      GG-CGGCGACGACAGCGGCGGCCTTCCACCACAAGCCTCCCCCGGCCGAGCTGTCCCTTC 294
consensus_13241#1      GG-CGGCGACGACAGCGGCGGCCTTCCACCACAAGCCTCCCCCGGCCGAGCTGTCCCTTC 245
consensus_13241#2      GGTCGGCGAGCACAGCGGCGGCCTTCC--------------------------------- 155
                       ** ******  ****************                                 

consensus_13241#0      GGCTCTCGCCGGCGAGGAGCAAGCATGCAAGAACGTGCCCGGCCGCCGACAACGACCGCG 354
consensus_13241#1      TGCTCTCGCCGGCGAGGAGCAAGCATGCAAGAACGTGCCCGGCCGCCGACAACGACCGCG 305
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      CGGCGCCCGCGGCACAGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAGCGCCA 414
consensus_13241#1      CGGCGCCCGCGGCACAGGAAGCAACAAACACGCCTCCGCCGCCGGCCGCGCCCAGCGCCA 365
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      ACGGCAGCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCACTGACGGCGCGGGAGCGGCTGC 474
consensus_13241#1      ACGGCAGCCCGCCCCAGGAGCCGCCGAAGCGGGCGCCACTGACGGCGCGGGAGCGGCTGC 425
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      GCGCGGCGCGCGTGCTGGGCAAGTACGCGGAGCCGGGGGGCTCGTCTCCGAAGGGCAAGG 534
consensus_13241#1      GCGCGGCGCGCGTGCTGGGCAAGTACGCGGAGCCTGGGGGCTCGTCTCCGAAGGGCAAGG 485
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      CCTCGGCGGCGTCGGCGGCGGCGGCTGGGGCGGCAGGGAAGAAGCCGGAGTTCGGGAGCC 594
consensus_13241#1      CCTCGGCGGCGTCGGCGGCGGC---TGGGGCGGCAGGGAAGAAGCCGGAGTTCGGGAGCC 542
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      GGGTGCTGGACGCGCTCCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCGGC 654
consensus_13241#1      GGGTGCTGGACGCGCTCCGGGAGACGGACGGGAAGGCCGGGAAGAAGCGGTCGTCGCGGC 602
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      TGCCCGAGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGT 714
consensus_13241#1      TGCCCGAGGCGCCGAGCAACATGTTCGACGACAGCAAGCGCGGCCTGCCCAAGGAAGGGT 662
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      GGACGTTCGAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCTTCACAC 774
consensus_13241#1      GGACGTTCGAGGCGCTGCCGTTCGGCACCGACGTGATCGTCATCGCCGCCTCCTTCACGC 722
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      TCATCACCGTCGTCATGTTCGGCCCCACGTACCTCGTTTGGAAGCTCGGCGCCATTCACT 834
consensus_13241#1      TCATCACCGTCGTCATGTTCGGCACCACGTACCTCGTCTGGAAGCTCGGCGCCATTCACT 782
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      TCAACGAGTTTTAGGCTACGTACTATCACTCACCCAATGAGCTCGCTAGATTTGTGGGTC 894
consensus_13241#1      TCAACGAGTTCTAGGCTACGTACTATCACTCACACAATGAGCTCGCTAGATTTGTGGGTC 842
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      TTTGGGTGATGAAATCGCGTTGGATTTGTAGCTGCCTTTTGCGGTGCTTTGATCAGATAC 954
consensus_13241#1      TTTGGGTGATGAAATCGCGTTGGATTTGTAGCTGCCTTTTGCGGTGCTTTGATCAGATAC 902
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      TCGTGTGATATTGTACTGAACTGCCGGCTTTGGTTTTTAGGGTGGATTTTGGAAAAAAAA 1014
consensus_13241#1      TCGTGTGATATTGTACTGAACTGCCGGCTTTGGTTTTAAGGGTGGATTTTGGAAAAACGT 962
consensus_13241#2      ------------------------------------------------------------
                                                                                   

consensus_13241#0      AAAAAAAAAAAAAAAAA------------------------------ 1031
consensus_13241#1      TGTACGAATCGATAGTTTACTTAATATAGTTATTATTCTACTAAAAA 1009
consensus_13241#2      -----------------------------------------------
                                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)