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Oryza sativa
cluster # 13269 cluster # 13269       Sequences # 12       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13269#0 length = 1507 sequences # 2  
consensus_13269#1 length = 1002 sequences # 1  
consensus_13269#2 length = 670 sequences # 4  
consensus_13269#3 length = 624 sequences # 1  
consensus_13269#4 length = 565 sequences # 2  
consensus_13269#5 length = 529 sequences # 1  
consensus_13269#6 length = 501 sequences # 1  

consensusID : consensus_13269#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1507
fasta sequence
                              [GGCGGCGACACACACAATGGCACAGCCACGCACTCACGTCGTAGGCGGCCTCCGCGCCCTCCGAACCGCGATCGTCTCGCCGTCGCCGGCGCCGCCCGCAGGCGAGCGCGCTCTACCTCTCACCTTCCTGGACGCGCAGTGGCTCAGCGCCCACCCCGTCGAGCGCGTCTTCTTCTACCGCCTCGGCCCCGGCGGCGACGACGTCGACGCCGTGCTGTCCCGGCTGGTCGAGTCGCTGGCCCGGGCGCTCCACGCCTTCTACCCGCTCGCCGGCCGCGTCCGCCTCACGCCCGGCGAGACCAACCGGTACGAGCTCTTCTACCAGCCCGGCGACGGCGTGGCGTTCACTGTCGCCGAGCACGACGGCGTCGGCGTCGGCGTCGATGAGCTGGCGGACACGGACGAGCCGAGGGAGGTTGCCAGGATTGCCACGTTCGTCCCGGAGCTCCCGAAGGGCGGCGCGGTGCTCGCGTTGCAGGCCACCGTGCTGCCGCCCGACCGCCGTGGCCTCGCTCTCGGCGTCACCGTCCACCACTCCGCCTGCGATGGGGTGAGCTCGACGCACTTCCTCCACACCTGGGCCGCCGCCTGCGCCGGCGACCGGGTGCTCCCGGAGCCACCCGTCATTGACCGCACGATCATCCGCGACCGCAACGACATGTACGACGCGTTCGCCTCACCCGCGAGCGAAGCCAAACATGCGTTCGATTCGCCCGACGTCGCCGGCAAGCTCCTCGCCACCTTCACTCTGTCGCGACAGCAGCTGCAGAACGTCAAGGACGCCGTCGCCGGCGAGGCCGCACGTCGCGGCGTGGCGCCGCCGCGTTGCACGTCGCTCGTCGCCACGCTCGGCCTCACGTGGCTGTGCTTCCGCCGCGCTGGGCCCGACGGCGAAGAAGGGCCTCGCGGTGACGGCCGCGCCCACCTCGTCTTCCCCGTCGACCACCGGTCGCGGCTGGAGCCCCGCGTCCCCGAAAAGTACCTCGGCAACTGCATCGGCCCGGGCTTTGCCACGGCACACGAGACGGAGCTCGCCACCACCACCACCACCGCCGATGGCCTCTTCACGGCTTGCGCCGCGGTCGCCGCCGGCATCGACGAGGCGGTGCGCGGCGAGCCGACATACTGGGAGCGGTGGGTGGAGCGCATCACCGAGGCGTGCGCGGACGACATGTCGCTGTCCGTGGCAGGATCGACGAGGTTCGGCGTGTACGACATGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGATGTCGTGTCCGTGGCGAAGACCGACGCGATGTCGGTGGCCGAGGACCGTTCCGGCTCCGGCGGCATCGAGGTGGGCATCGCTCTGTCGCCGGCGCGCATGGAGCGGTTCCGGAGGTGGCTCGCCGACGCCATCGCCCTGCTCTCCTCGTCTTCCCACTGCAACTAGCTAGGGTGGAATCTGCAAAAATAATTAAGTATTTTGCTTGAATTCTAGAACTTTGAATTTATTACCCTAAAAAATCTAATCCTTTGAATC]

[+] EMBL AK073495             [GGCGGCGACACACACAATGGCACAGCCACGCACTCACGTCGTAGGCGGCCTCCGCGCCCTCCGAACCGCGATCGTCTCGCCGTCGCCGGCGCCGCCCGCAGGCGAGCGCGCTCTACCTCTCACCTTCCTGGACGCGCAGTGGCTCAGCGCCCACCCCGTCGAGCGCGTCTTCTTCTACCGCCTCGGCCCCGGCGGCGACGACGTCGACGCCGTGCTGTCCCGGCTGGTCGAGTCGCTGGCCCGGGCGCTCCACGCCTTCTACCCGCTCGCCGGCCGCGTCCGCCTCACGCCCGGCGAGACCAACCGGTACGAGCTCTTCTACCAGCCCGGCGACGGCGTGGCGTTCACTGTCGCCGAGCACGACGGCGTCGGCGTCGGCGTCGATGAGCTGGCGGACACGGACGAGCCGAGGGAGGTTGCCAGGATTGCCACGTTCGTCCCGGAGCTCCCGAAGGGCGGCGCGGTGCTCGCGTTGCAGGCCACCGTGCTGCCGCCCGACCGCCGTGGCCTCGCTCTCGGCGTCACCGTCCACCACTCCGCCTGCGATGGGGTGAGCTCGACGCACTTCCTCCACACCTGGGCCGCCGCCTGCGCCGGCGACCGGGTGCTCCCGGAGCCACCCGTCATTGACCGCACGATCATCCGCGACCGCAACGACATGTACGACGCGTTCGCCTCACCCGCGAGCGAAGCCAAACATGCGTTCGATTCGCCCGACGTCGCCGGCAAGCTCCTCGCCACCTTCACTCTGTCGCGACAGCAGCTGCAGAACGTCAAGGACGCCGTCGCCGGCGAGGCCGCACGTCGCGGCGTGGCGCCGCCGCGTTGCACGTCGCTCGTCGCCACGCTCGGCCTCACGTGGCTGTGCTTCCGCCGCGCTGGGCCCGACGGCGAAGAAGGGCCTCGCGGTGACGGCCGCGCCCACCTCGTCTTCCCCGTCGACCACCGGTCGCGGCTGGAGCCCCGCGTCCCCGAAAAGTACCTCGGCAACTGCATCGGCCCGGGCTTTGCCACGGCACACGAGACGGAGCTCGCCACCACCACCACCACCGCCGATGGCCTCTTCACGGCTTGCGCCGCGGTCGCCGCCGGCATCGACGAGGCGGTGCGCGGCGAGCCGACATACTGGGAGCGGTGGGTGGAGCGCATCACCGAGGCGTGCGCGGACGACATGTCGCTGTCCGTGGCAGGATCGACGAGGTTCGGCGTGTACGACATGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGATGTCGTGTCCGTGGCGAAGACCGACGCGATGTCGGTGGCCGAGGACCGTTCCGGCTCCGGCGGCATCGAGGTGGGCATCGCTCTGTCGCCGGCGCGCATGGAGCGGTTCCGGAGGTGGCTCGCCGACGCCATCGCCCTGCTCTCCTCGTCTTCCCACTGCAACTAGCTAGGGTGGAATCTGCAAAAATAATTAAGTATTTTGCTTGAATTCTAGAACTTTGAATTTATTACCCTAAAAAATCTAATCCTTTGAATC]
[+] EMBL AK105836             [               AATGGCACAGCCACGCACTCACGTCGTAGGCGGCCTCCGCGCCCTCCGAACCGCGATCGTCTCGCCGTCGCCGGCGCCGCCCGCAGGCGAGCGCGCTCTACCTCTCACCTTCCTGGACGCGCAGTGGCTCAGCGCCCACCCCGTCGAGCGCGTCTTCTTCTACCGCCTCGGCCCCGGCGGCGACGACGTCGACGCCGTGCTGTCCCGGCTGGTCGAGTCGCTGGCCCGGGCGCTCCACGCCTTCTACCCGCTCGCCGGCCGCGTCCGCCTCACGCCCGGCGAGACCAACCGGTACGAGCTCTTCTACCAGCCCGGCGACGGCGTGGCGTTCACTGTCGCCGAGCACGACGGCGTCGGCGTCGGCGTCGATGAGCTGGCGGACACGGACGAGCCGAGGGAGGTTGCCAGGATTGCCACGTTCGTCCCGGAGCTCCCGAAGGGCGGCGCGGTGCTCGCGTTGCAGGCCACCGTGCTGCCGCCCGACCGCCGTGGCCTCGCTCTCGGCGTCACCGTCCACCACTCCGCCTGCGATGGGGTGAGCTCGACGCACTTCCTCCACACCTGGGCCGCCGCCTGCGCCGGCGACCGGGTGCTCCCGGAGCCACCCGTCATTGACCGCACGATCATCCGCGACCGCAACGACATGTACGACGCGTTCGCCTCACCCGCGAGCGAAGCCAAACATGCGTTCGATTCGCCCGACGTCGCCGGCAAGCTCCTCGCCACCTTCACTCTGTCGCGACAGCAGCTGCAGAACGTCAAGGACGCCGTCGCCGGCGAGGCCGCACGTCGCGGCGTGGCGCCGCCGCGTTGCACGTCGCTCGTCGCCACGCTCGGCCTCACGTGGCTGTGCTTCCGCCGCGCTGGGCCCGACGGCGAAGAAGGGCCTCGCGGTGACGGCCGCGCCCACCTCGTCTTCCCCGTCGACCACCGGTCGCGGCTGGAGCCCCGCGTCCCCGAAAAGTACCTCGGCAACTGCATCGGCCCGGGCTTTGCCACGGCACACGAGACGGAGCTCGCCACCACCACCACCACCGCCGATGGCCTCTTCACGGCTTGCGCCGCGGTCGCCGCCGGCATCGACGAGGCGGTGCGCGGCGAGCCGACATACTGGGAGCGGTGGGTGGAGCGCATCACCGAGGCGTGCGCGGACGACATGTCGCTGTCCGTGGCAGGATCGACGAGGTTCGGCGTGTACGACATGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGATGTCGTGTCCGTGGCGAAGACCGACGCGATGTCGGTGGCCGAGGACCGTTCCGGCTCCGGCGGCATCGAGGTGGGTATCGCTCTGTCGCCGGCGCGCATGGAGCGGTTCCGGAGGTGGCTCGCCGACGCCATCGCCCTGCTCTCCTCGTCTTCCCACTGCAACTAGCTAGAGTGGAATCTGCAAAAATAATTAAGTATTTTGCTTGAATTCTAGAACTTTGAATTTATTACCCTAAAAAATCTAATCCTTTGAATC]


>consensus_13269#0 GGCGGCGACACACACAATGGCACAGCCACGCACTCACGTCGTAGGCGGCCTCCGCGCCCT CCGAACCGCGATCGTCTCGCCGTCGCCGGCGCCGCCCGCAGGCGAGCGCGCTCTACCTCT CACCTTCCTGGACGCGCAGTGGCTCAGCGCCCACCCCGTCGAGCGCGTCTTCTTCTACCG CCTCGGCCCCGGCGGCGACGACGTCGACGCCGTGCTGTCCCGGCTGGTCGAGTCGCTGGC CCGGGCGCTCCACGCCTTCTACCCGCTCGCCGGCCGCGTCCGCCTCACGCCCGGCGAGAC CAACCGGTACGAGCTCTTCTACCAGCCCGGCGACGGCGTGGCGTTCACTGTCGCCGAGCA CGACGGCGTCGGCGTCGGCGTCGATGAGCTGGCGGACACGGACGAGCCGAGGGAGGTTGC CAGGATTGCCACGTTCGTCCCGGAGCTCCCGAAGGGCGGCGCGGTGCTCGCGTTGCAGGC CACCGTGCTGCCGCCCGACCGCCGTGGCCTCGCTCTCGGCGTCACCGTCCACCACTCCGC CTGCGATGGGGTGAGCTCGACGCACTTCCTCCACACCTGGGCCGCCGCCTGCGCCGGCGA CCGGGTGCTCCCGGAGCCACCCGTCATTGACCGCACGATCATCCGCGACCGCAACGACAT GTACGACGCGTTCGCCTCACCCGCGAGCGAAGCCAAACATGCGTTCGATTCGCCCGACGT CGCCGGCAAGCTCCTCGCCACCTTCACTCTGTCGCGACAGCAGCTGCAGAACGTCAAGGA CGCCGTCGCCGGCGAGGCCGCACGTCGCGGCGTGGCGCCGCCGCGTTGCACGTCGCTCGT CGCCACGCTCGGCCTCACGTGGCTGTGCTTCCGCCGCGCTGGGCCCGACGGCGAAGAAGG GCCTCGCGGTGACGGCCGCGCCCACCTCGTCTTCCCCGTCGACCACCGGTCGCGGCTGGA GCCCCGCGTCCCCGAAAAGTACCTCGGCAACTGCATCGGCCCGGGCTTTGCCACGGCACA CGAGACGGAGCTCGCCACCACCACCACCACCGCCGATGGCCTCTTCACGGCTTGCGCCGC GGTCGCCGCCGGCATCGACGAGGCGGTGCGCGGCGAGCCGACATACTGGGAGCGGTGGGT GGAGCGCATCACCGAGGCGTGCGCGGACGACATGTCGCTGTCCGTGGCAGGATCGACGAG GTTCGGCGTGTACGACATGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGATGTCGTGTC CGTGGCGAAGACCGACGCGATGTCGGTGGCCGAGGACCGTTCCGGCTCCGGCGGCATCGA GGTGGGCATCGCTCTGTCGCCGGCGCGCATGGAGCGGTTCCGGAGGTGGCTCGCCGACGC CATCGCCCTGCTCTCCTCGTCTTCCCACTGCAACTAGCTAGGGTGGAATCTGCAAAAATA ATTAAGTATTTTGCTTGAATTCTAGAACTTTGAATTTATTACCCTAAAAAATCTAATCCT TTGAATC



consensusID : consensus_13269#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1002
fasta sequence
                              [GCGACGTACCGGAGATGCACGACGAGTTCGCCGCACCCACGAACGAAGCCAAAGATCTGTTCAAGGCGCCCGACGCCGGCAAGTTCCTCGCCACCTTCACCCTGTCCAGAGAGCACCTCCAGGGCGTCAAGGACGCCGTCGCCGCCGAGGCCGCACGTCGCGGCGTTCCGCCGCCTCGGTGCACGTCCCTCGTGGCGATGTACGGCCTCATGTGGCACTGCTACCGCCGCTCCAGACGGGAAAGCGACAACGGCGGCAGCGGCCGTGCCGCCGCCGCCGCCCACTTCATCTTCTCCGTCGACCACCGGTCGCGGCTGGTGCCCCGCGTCCCCGACAAGTACCTCGGCAACTGCGTCGGCCCGGGCTTCGTCTCGGCGCCCGAGGAGGAGCTCGCCGGCGCCGCCGTGGCGGGCGGCGTCTTCACGGCCTGCGCGGCGGTGGCCGCCGCCATCGACGAGGCGGTGCGCGGCGAGCCCGCGTACTGGGAGGGGTGGAAGGAGCGCATCGTGGAGGCGTGCAGGGACGACGCGCCGTTCTCGGTGGCCGGGTCGACGAGGTTCCGCGTGTACGACGTCGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGAGATCGTGTCCGTGGCGAAGACCGGCGCGGTGTCGGCGGCGGAGGATCGTTCTGGCGCCGGCGGCATCGAGGTGGGCATAGCTCTGCTGCCGGAGCGCATGGACACGTTCCGGAGGTGCCTCGCCGACGCCATGGCTTGGTTTTCCTCGTCTTCCCAATGCAACTAGCGTGGGAACTGCAACACGTACGTCGAGTAGATTTCTTTAGAGAGATTCGGTTTTCATGTCTTTTTGCTGGCTTATACTCTCTCTGTGAAAAAAGAAATCAAAACCTGGGATGAATCCACACATGTATGTTAATATTCATCCCTTGGGTTTGATTCTTTTTAGAACTTTATAATTTAATTTTGGTGATTGTATTTTTATGCCTACTACTTTTAAAATTCTAGTAATAATT]

[+] EMBL AK064246             [GCGACGTACCGGAGATGCACGACGAGTTCGCCGCACCCACGAACGAAGCCAAAGATCTGTTCAAGGCGCCCGACGCCGGCAAGTTCCTCGCCACCTTCACCCTGTCCAGAGAGCACCTCCAGGGCGTCAAGGACGCCGTCGCCGCCGAGGCCGCACGTCGCGGCGTTCCGCCGCCTCGGTGCACGTCCCTCGTGGCGATGTACGGCCTCATGTGGCACTGCTACCGCCGCTCCAGACGGGAAAGCGACAACGGCGGCAGCGGCCGTGCCGCCGCCGCCGCCCACTTCATCTTCTCCGTCGACCACCGGTCGCGGCTGGTGCCCCGCGTCCCCGACAAGTACCTCGGCAACTGCGTCGGCCCGGGCTTCGTCTCGGCGCCCGAGGAGGAGCTCGCCGGCGCCGCCGTGGCGGGCGGCGTCTTCACGGCCTGCGCGGCGGTGGCCGCCGCCATCGACGAGGCGGTGCGCGGCGAGCCCGCGTACTGGGAGGGGTGGAAGGAGCGCATCGTGGAGGCGTGCAGGGACGACGCGCCGTTCTCGGTGGCCGGGTCGACGAGGTTCCGCGTGTACGACGTCGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGAGATCGTGTCCGTGGCGAAGACCGGCGCGGTGTCGGCGGCGGAGGATCGTTCTGGCGCCGGCGGCATCGAGGTGGGCATAGCTCTGCTGCCGGAGCGCATGGACACGTTCCGGAGGTGCCTCGCCGACGCCATGGCTTGGTTTTCCTCGTCTTCCCAATGCAACTAGCGTGGGAACTGCAACACGTACGTCGAGTAGATTTCTTTAGAGAGATTCGGTTTTCATGTCTTTTTGCTGGCTTATACTCTCTCTGTGAAAAAAGAAATCAAAACCTGGGATGAATCCACACATGTATGTTAATATTCATCCCTTGGGTTTGATTCTTTTTAGAACTTTATAATTTAATTTTGGTGATTGTATTTTTATGCCTACTACTTTTAAAATTCTAGTAATAATT]


>consensus_13269#1 GCGACGTACCGGAGATGCACGACGAGTTCGCCGCACCCACGAACGAAGCCAAAGATCTGT TCAAGGCGCCCGACGCCGGCAAGTTCCTCGCCACCTTCACCCTGTCCAGAGAGCACCTCC AGGGCGTCAAGGACGCCGTCGCCGCCGAGGCCGCACGTCGCGGCGTTCCGCCGCCTCGGT GCACGTCCCTCGTGGCGATGTACGGCCTCATGTGGCACTGCTACCGCCGCTCCAGACGGG AAAGCGACAACGGCGGCAGCGGCCGTGCCGCCGCCGCCGCCCACTTCATCTTCTCCGTCG ACCACCGGTCGCGGCTGGTGCCCCGCGTCCCCGACAAGTACCTCGGCAACTGCGTCGGCC CGGGCTTCGTCTCGGCGCCCGAGGAGGAGCTCGCCGGCGCCGCCGTGGCGGGCGGCGTCT TCACGGCCTGCGCGGCGGTGGCCGCCGCCATCGACGAGGCGGTGCGCGGCGAGCCCGCGT ACTGGGAGGGGTGGAAGGAGCGCATCGTGGAGGCGTGCAGGGACGACGCGCCGTTCTCGG TGGCCGGGTCGACGAGGTTCCGCGTGTACGACGTCGACTTCGGGTTCGGGAGGCCGGCGA AGGTGGAGATCGTGTCCGTGGCGAAGACCGGCGCGGTGTCGGCGGCGGAGGATCGTTCTG GCGCCGGCGGCATCGAGGTGGGCATAGCTCTGCTGCCGGAGCGCATGGACACGTTCCGGA GGTGCCTCGCCGACGCCATGGCTTGGTTTTCCTCGTCTTCCCAATGCAACTAGCGTGGGA ACTGCAACACGTACGTCGAGTAGATTTCTTTAGAGAGATTCGGTTTTCATGTCTTTTTGC TGGCTTATACTCTCTCTGTGAAAAAAGAAATCAAAACCTGGGATGAATCCACACATGTAT GTTAATATTCATCCCTTGGGTTTGATTCTTTTTAGAACTTTATAATTTAATTTTGGTGAT TGTATTTTTATGCCTACTACTTTTAAAATTCTAGTAATAATT



consensusID : consensus_13269#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 670
fasta sequence
                              [CCTCTTCACGACCTGCGCCGCGATCGCCGCCGCCATCGACGAAGGAACGAGATACGATCCCGGCTACTGGGAGAGGTGCAGGGAGCACGTCAGAGGGATGAGCACGAGCGACGGCCCGCCGCTAGCGGTGGCCGGGTCGCCGAGGTTCCGCGTGTACGACGTGGACTTTGGGTTCGGGAGGCCGACGAAGGTGGACGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGGTGGCGGAGGGCCGCGGCGGCGGCATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTTCACTGATGCCGTCACGTGGCTATCGTCGCCATCGTCCAGTGACACGTGACACGTGGCGCGCGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCGTGGGCTTCGATGGGCTGCTTCCGTCAGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGATTGATAAGTGCTGAAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTC-TTTTTTTTTTTAAGAGAATACCGTAGTATTGTATCGACGTATCCGTATCCCAATATCCATCCCTATTTAAAACATATATGGATTTTTCTCATCGTCGCAGATAAATTTGTAATGAAAAAAACAAATTAAACTACAGC]

[+] EMBL AK103832             [CCTCTTCACGACCTGCGCCGCGATCGCCGCCGCCATCGACGAAGGAACGAGATACGATCCCGGCTACTGGGAGAGGTGCAGGGAGCACGTCAGAGGGATGAGCACGAGCGACGGCCCGCCGCTAGCGGTGGCCGGGTCGCCGAGGTTCCGCGTGTACGACGTGGACTTTGGGTTCGGGAGGCCGACGAAGGTGGACGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGGTGGCGGAGGGCCGCGGCGGCGGCATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTTCACTGATGCCGTCACGTGGCTATCGTCGCCATCGTCCAGTGACACGTGACACGTGGCGCGCGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCGTGGGCTTCGATGGGCTGCTTCCGTCAGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGATTGATAAGTGCTGAAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTC TTTTTTTTTTTAAGAGAATACCGTAGTATTGTATCGACGTATCCGTATCCCAATATCCATCCCTATTTAAAACATATATGGATTTTTCTCATCGTCGCAGATAAATTTGTAATGAAAAAAACAAATTAAACTACAGC]
[+] EMBL AU181878             [                                                                                                                                       GTCGCCGAGGTTCCGCGTGTACGACGTGGACTTTGGGTTCGGGAGGCCGACGAAGGTGGACGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGGTGGCGGAGGGCCGCGGCGGCGGCATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTTCACTGATGCCGTCACGTGGCTATCGTCGCCATCGTCCAGTGACACGTGACACGTGGCGCGCGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCGTGGGCTTCGATGGGCTGCTTCCGTCAGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGATTGATAAGTGCTGAAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTC TTTTTTTTTTTAAGAGAATACCGTAGTATTGTATCGACGTATCCGTATCCCAATATCCATCCCTATTTAAAACAaaaa                                                           ]
[+] EMBL AU181250             [                                                                                                                                                                             TCGGGAGGCCGACGAAGGTGGACGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGGTGGCGGAGGGCCGCGGCGGCGGCATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTTCACTGATGCCGTCACGTGGCTATCGTCGCCATCGTCCAGTGACACGTGACACGTGGCGCGCGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCGTGGGCTTCGATGGGCTGCTTCCGTCAGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGATTGATAAGTGCTGAAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTC TTTTTTTTTTTAAGAGAATACCGTAGTATTGTATCGACGTATCCGTATCCCAATATCCATCCCTATTTAAAACAaaaa                                                           ]
[+] EMBL AU166419             [                                                                                                                                                                                                   CGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGGTGGCGGAGGGCCNCGGCGGCGGCATTNAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTTCACTGATGCCGTCACGTGGCTATCGTCGCCATCGTCCAGTGACACGTGACACGTGGCGCGCGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCGTGGGCTTCGATGGGCTGCTTCCGTCAGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGATTGATAAGTGCTGAAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTCTTTTTTTTTTTTAAGAGAATACCGTAGTATTGTATCGACGTATCCGTATCCCAATATCCATCCCTATTTAAAACATATATGGATTTTTCTCAaaaa                                          ]


>consensus_13269#2 CCTCTTCACGACCTGCGCCGCGATCGCCGCCGCCATCGACGAAGGAACGAGATACGATCC CGGCTACTGGGAGAGGTGCAGGGAGCACGTCAGAGGGATGAGCACGAGCGACGGCCCGCC GCTAGCGGTGGCCGGGTCGCCGAGGTTCCGCGTGTACGACGTGGACTTTGGGTTCGGGAG GCCGACGAAGGTGGACGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGGTGGCGGAGGG CCGCGGCGGCGGCATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCG GAGGTGCTTCACTGATGCCGTCACGTGGCTATCGTCGCCATCGTCCAGTGACACGTGACA CGTGGCGCGCGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCGTGGGCTTCGATG GGCTGCTTCCGTCAGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGA TTGATAAGTGCTGAAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTCTTTTTTT TTTTAAGAGAATACCGTAGTATTGTATCGACGTATCCGTATCCCAATATCCATCCCTATT TAAAACATATATGGATTTTTCTCATCGTCGCAGATAAATTTGTAATGAAAAAAACAAATT AAACTACAGC



consensusID : consensus_13269#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 624
fasta sequence
                              [TGCGCCGCGATCGCCGCCGCNATCGACGAAGGAACGAGATACGATCCCGGCTACTGGGAGAGGTGCAGGGAGCACGTCAGAGGGATGAGCACGAGCGACGGCCCGCCGCTAGCGGTGGCCGGGTCGCCGAGGTTCCGCGTNTACGACGTGGACTTTGGGTTCGGGAGGCCGACGAAGGTGGACGTCGTGTCCGTGGCGAAGACCGGGGCGATNTCGGTGGCGGAGGGCCGCGGCGGCGGCATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTTCACTGATGCCGTCACGTGGCTATCGTCGCCATCGTCCAGTGACACGTGACACGTGGCGCGCGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCGTGGGCTTCGATGGGCTGCTTCCGTCAGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGATTGATAAGTGCTGAAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTCTTTTTTTTTTAAGAGAATACCGTAGTATTGTATCGACGTATCCGTATCCCAATATCCATCCCTATTTAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU092868             [TGCGCCGCGATCGCCGCCGCNATCGACGAAGGAACGAGATACGATCCCGGCTACTGGGAGAGGTGCAGGGAGCACGTCAGAGGGATGAGCACGAGCGACGGCCCGCCGCTAGCGGTGGCCGGGTCGCCGAGGTTCCGCGTNTACGACGTGGACTTTGGGTTCGGGAGGCCGACGAAGGTGGACGTCGTGTCCGTGGCGAAGACCGGGGCGATNTCGGTGGCGGAGGGCCGCGGCGGCGGCATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTTCACTGATGCCGTCACGTGGCTATCGTCGCCATCGTCCAGTGACACGTGACACGTGGCGCGCGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCGTGGGCTTCGATGGGCTGCTTCCGTCAGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGATTGATAAGTGCTGAAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTCTTTTTTTTTTAAGAGAATACCGTAGTATTGTATCGACGTATCCGTATCCCAATATCCATCCCTATTTAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_13269#3 TGCGCCGCGATCGCCGCCGCNATCGACGAAGGAACGAGATACGATCCCGGCTACTGGGAG AGGTGCAGGGAGCACGTCAGAGGGATGAGCACGAGCGACGGCCCGCCGCTAGCGGTGGCC GGGTCGCCGAGGTTCCGCGTNTACGACGTGGACTTTGGGTTCGGGAGGCCGACGAAGGTG GACGTCGTGTCCGTGGCGAAGACCGGGGCGATNTCGGTGGCGGAGGGCCGCGGCGGCGGC ATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTTCACT GATGCCGTCACGTGGCTATCGTCGCCATCGTCCAGTGACACGTGACACGTGGCGCGCGGC AGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCGTGGGCTTCGATGGGCTGCTTCCGTC AGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGATTGATAAGTGCTG AAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTCTTTTTTTTTTAAGAGAATAC CGTAGTATTGTATCGACGTATCCGTATCCCAATATCCATCCCTATTTAAAACAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13269#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 565
fasta sequence
                              [AGTTACGTTCCGGACTACTGGAAGAGGTGCATGGAACACGTTGGAGGGATGAGCGCGAGCNTCGGTCCGCCGTTAGCGTGGCCGGGTCGCCGAGGTTCCGCGTGTACGACGTGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGACGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGGTGGCGGAGGGCCGCCGCGGC-GCATTG-AGGTGGGCGTCGGTTTG-CCGCCGGAGC-GATGGAGAGGTTCCGG-AGGTGCTTCGCTGATGCCGTCGCGTGGCTATCGTCGCCGTCTCGTCCAGTGACACGTGACATGGATCGATCAGCTCCGGGCCACTCCCCGGCGTAGGCGGCGGCGGCAGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTCCACTCGCTGGGCTTCCGTGGGATTCGATGGGCTGGTTCCCCGTACCCTTATTTTTTTTCTTGGAAAATACCGTAGCATTGTACCGACAGGGTGTGTTCGCTAAGTTGCCAGCGTGGAACAGTCTGCATGGTATGCATGGTAAACAGAGGTATTAGCGTGTGAAAAAAAAAAA]

[+] EMBL AU083378             [AGTTACGTTCCGGACTACTGGAAGAGGTGCATGGAACACGTTGGAGGGATGAGCGCGAGCNTCGGTCCGCCGTTAGCGTGGCCGGGTCGCCGAGGTTCCGCGTGTACGACGTGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGACGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGGTGGCGGAGGGCCGCCGCGGC GCATTG AGGTGGGCGTCGGTTTG CCGCCGGAGC GATGGAGAGGTTCCGG AGGTGCTTCGCTGATGCCGTCGCGTGGCTATCGTCGCCGTCTCGTCCAGTGACACGTGACATGGATCGATCAGCTCCGGGCCACTCCCCGGCGTAGGCGGCGGCGGCAGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTCCACTCGCTG                                                                                                                                                                   ]
[+] EMBL AU083379             [                                                                                       CGCCGAGGTTCCGCGTGTACGACNTGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGACGTCNTGTCCGTGGCGAAGACCGGGGCGATCTCGNTGGCGGAAGGGCGCCGCGGCGGCATTGAAGGTGGGCGTCGGTTTGCCCGCCGGAGCGGATGGAGAGGTTCCGGAAGGTG TTCGCTGATGCCGTCGCGTGGCTATCGTCGCCGTCTCGTCCAGTGACACGTGACATGGATCGATCAGCTCCGGGCCACTCCCCGGCNTAGGCGGCGGCGGCAGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTCCACTCGCTGGGCTTCCGTGGGATTCGATGGGCTGGTTCCCCGTACCCTTATTTTTTTTCTTGGAAAATACCGTAGCATTGTACCGACAGGGTGTGTTCGCTAAGTTGCCAGCGTGGAACAGTCTGCATGGTATGCATGGTAAACAGAGGTATTAGCGTGTGAAAAAAAAAAA]


>consensus_13269#4 AGTTACGTTCCGGACTACTGGAAGAGGTGCATGGAACACGTTGGAGGGATGAGCGCGAGC NTCGGTCCGCCGTTAGCGTGGCCGGGTCGCCGAGGTTCCGCGTGTACGACGTGGACTTCG GGTTCGGGAGGCCGGCGAAGGTGGACGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGG TGGCGGAGGGCCGCCGCGGCGCATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGATGGAG AGGTTCCGGAGGTGCTTCGCTGATGCCGTCGCGTGGCTATCGTCGCCGTCTCGTCCAGTG ACACGTGACATGGATCGATCAGCTCCGGGCCACTCCCCGGCGTAGGCGGCGGCGGCAGGC AGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTCCACTCGCTGGGCTTCCGTGGGATTCGA TGGGCTGGTTCCCCGTACCCTTATTTTTTTTCTTGGAAAATACCGTAGCATTGTACCGAC AGGGTGTGTTCGCTAAGTTGCCAGCGTGGAACAGTCTGCATGGTATGCATGGTAAACAGA GGTATTAGCGTGTGAAAAAAAAAAA



consensusID : consensus_13269#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 529
fasta sequence
                              [TCGCGGCGGAGGTATCGTTCTGGCGTCCGGCGGCATCGAGGTGGGCATAGCTATGCTGCCGGAGCGCATGGACACGTTCCGGAGGTGCCTCGCCGACGCCATGGCTTGGTTTTCCTCGTCTTCCCAATGCAACTAGCGTGGGAACTGCAACACGTACGTCGAGTAGATTTCNTTAGAGAGATTCGGTTTTCCAAGTCTATTTGCTGGCTTATACTCTCTCTGTGCAAAAGAATAAAAAATCAAAATCAAACCAGCGATGAATGACATTGGCCTTGTTTAGTTCCAAGTTTTTTTCTAAACTTTCAACNGTTCCCATCACATGCAATCTGTCCTACACACATAAACTNTCAATCACATCGTTCTAATTTTCAACCAACTTCCACTTCGGCGCGAACTAAACACACCATATGTGTGGTCAGATTCATCTTTAGGTTTGATTCCTTTTAGAAATTTATAATTNAATTTTGGTGATTGTATNTTNATCTCTACTACNTTTAAACTGCTAGTAATAATTATTTACCNATAAAAA]

[+] EMBL BI805765             [TCGCGGCGGAGGTATCGTTCTGGCGTCCGGCGGCATCGAGGTGGGCATAGCTATGCTGCCGGAGCGCATGGACACGTTCCGGAGGTGCCTCGCCGACGCCATGGCTTGGTTTTCCTCGTCTTCCCAATGCAACTAGCGTGGGAACTGCAACACGTACGTCGAGTAGATTTCNTTAGAGAGATTCGGTTTTCCAAGTCTATTTGCTGGCTTATACTCTCTCTGTGCAAAAGAATAAAAAATCAAAATCAAACCAGCGATGAATGACATTGGCCTTGTTTAGTTCCAAGTTTTTTTCTAAACTTTCAACNGTTCCCATCACATGCAATCTGTCCTACACACATAAACTNTCAATCACATCGTTCTAATTTTCAACCAACTTCCACTTCGGCGCGAACTAAACACACCATATGTGTGGTCAGATTCATCTTTAGGTTTGATTCCTTTTAGAAATTTATAATTNAATTTTGGTGATTGTATNTTNATCTCTACTACNTTTAAACTGCTAGTAATAATTATTTACCNATAAAAA]


>consensus_13269#5 TCGCGGCGGAGGTATCGTTCTGGCGTCCGGCGGCATCGAGGTGGGCATAGCTATGCTGCC GGAGCGCATGGACACGTTCCGGAGGTGCCTCGCCGACGCCATGGCTTGGTTTTCCTCGTC TTCCCAATGCAACTAGCGTGGGAACTGCAACACGTACGTCGAGTAGATTTCNTTAGAGAG ATTCGGTTTTCCAAGTCTATTTGCTGGCTTATACTCTCTCTGTGCAAAAGAATAAAAAAT CAAAATCAAACCAGCGATGAATGACATTGGCCTTGTTTAGTTCCAAGTTTTTTTCTAAAC TTTCAACNGTTCCCATCACATGCAATCTGTCCTACACACATAAACTNTCAATCACATCGT TCTAATTTTCAACCAACTTCCACTTCGGCGCGAACTAAACACACCATATGTGTGGTCAGA TTCATCTTTAGGTTTGATTCCTTTTAGAAATTTATAATTNAATTTTGGTGATTGTATNTT NATCTCTACTACNTTTAAACTGCTAGTAATAATTATTTACCNATAAAAA



consensusID : consensus_13269#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 501
fasta sequence
                              [GACCACCATGTGCTCCCCGCTTTCGTGCTGGTCCCGAGGTTCCGCGTGTACGACTGGACTTTGGTTCGGGAGCCGGCGAAGGTGGACGTCGTGTCCGTGGCCAAGACCGGGGCGATGTCGGTGGCGGCGGCCTTGAGGTGGGCATCGCTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTTCGGCGAAGACGTCGCCGTCGCGTGGCCGTCGTCGTGATCCAGTGATAAGTGGCCTTGAATATATGTCCATAGCGGGGCCGCCTAATGGGCGACTGGTCGCGGAGGGGCGTGGGCGCACGCCCCGCGCCGCTTCTGCTCTACTAGACTACTAGCTACTACGTGCAGTACNACTAGTCTACTCTGTTGCTGTATGATACTACTGCTATGTAGTCTGTACTACTCCATCCGTCCCTTAATATAAGAGGTTTTAATATTTTACTTACCCTATTTGACCCTTCATCTTAATAAAAAAAAGTTTAGATTTAAAAAAAAAA]

[+] EMBL BM038754             [GACCACCATGTGCTCCCCGCTTTCGTGCTGGTCCCGAGGTTCCGCGTGTACGACTGGACTTTGGTTCGGGAGCCGGCGAAGGTGGACGTCGTGTCCGTGGCCAAGACCGGGGCGATGTCGGTGGCGGCGGCCTTGAGGTGGGCATCGCTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTTCGGCGAAGACGTCGCCGTCGCGTGGCCGTCGTCGTGATCCAGTGATAAGTGGCCTTGAATATATGTCCATAGCGGGGCCGCCTAATGGGCGACTGGTCGCGGAGGGGCGTGGGCGCACGCCCCGCGCCGCTTCTGCTCTACTAGACTACTAGCTACTACGTGCAGTACNACTAGTCTACTCTGTTGCTGTATGATACTACTGCTATGTAGTCTGTACTACTCCATCCGTCCCTTAATATAAGAGGTTTTAATATTTTACTTACCCTATTTGACCCTTCATCTTAATAAAAAAAAGTTTAGATTTAAAAAAAAAA]


>consensus_13269#6 GACCACCATGTGCTCCCCGCTTTCGTGCTGGTCCCGAGGTTCCGCGTGTACGACTGGACT TTGGTTCGGGAGCCGGCGAAGGTGGACGTCGTGTCCGTGGCCAAGACCGGGGCGATGTCG GTGGCGGCGGCCTTGAGGTGGGCATCGCTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGA GGTGCTTCGGCGAAGACGTCGCCGTCGCGTGGCCGTCGTCGTGATCCAGTGATAAGTGGC CTTGAATATATGTCCATAGCGGGGCCGCCTAATGGGCGACTGGTCGCGGAGGGGCGTGGG CGCACGCCCCGCGCCGCTTCTGCTCTACTAGACTACTAGCTACTACGTGCAGTACNACTA GTCTACTCTGTTGCTGTATGATACTACTGCTATGTAGTCTGTACTACTCCATCCGTCCCT TAATATAAGAGGTTTTAATATTTTACTTACCCTATTTGACCCTTCATCTTAATAAAAAAA AGTTTAGATTTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      GGCGGCGACACACACAATGGCACAGCCACGCACTCACGTCGTAGGCGGCCTCCGCGCCCT 60
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CCGAACCGCGATCGTCTCGCCGTCGCCGGCGCCGCCCGCAGGCGAGCGCGCTCTACCTCT 120
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CACCTTCCTGGACGCGCAGTGGCTCAGCGCCCACCCCGTCGAGCGCGTCTTCTTCTACCG 180
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CCTCGGCCCCGGCGGCGACGACGTCGACGCCGTGCTGTCCCGGCTGGTCGAGTCGCTGGC 240
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CCGGGCGCTCCACGCCTTCTACCCGCTCGCCGGCCGCGTCCGCCTCACGCCCGGCGAGAC 300
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CAACCGGTACGAGCTCTTCTACCAGCCCGGCGACGGCGTGGCGTTCACTGTCGCCGAGCA 360
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CGACGGCGTCGGCGTCGGCGTCGATGAGCTGGCGGACACGGACGAGCCGAGGGAGGTTGC 420
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CAGGATTGCCACGTTCGTCCCGGAGCTCCCGAAGGGCGGCGCGGTGCTCGCGTTGCAGGC 480
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CACCGTGCTGCCGCCCGACCGCCGTGGCCTCGCTCTCGGCGTCACCGTCCACCACTCCGC 540
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CTGCGATGGGGTGAGCTCGACGCACTTCCTCCACACCTGGGCCGCCGCCTGCGCCGGCGA 600
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      --------------------------------------------GCGACGTACCGGAGAT 16
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CCGGGTGCTCCCGGAGCCACCCGTCATTGACCGCACGATCATCCGCGACCGCAACGACAT 660
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      GCACGACGAGTTCGCCGCACCCACGAACGAAGCCAAAGATCTGTTCAAGGCGCCCGACG- 75
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      GTACGACGCGTTCGCCTCACCCGCGAGCGAAGCCAAACATGCGTTCGATTCGCCCGACGT 720
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      --CCGGCAAGTTCCTCGCCACCTTCACCCTGTCCAGAGAGCACCTCCAGGGCGTCAAGGA 133
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CGCCGGCAAGCTCCTCGCCACCTTCACTCTGTCGCGACAGCAGCTGCAGAACGTCAAGGA 780
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      CGCCGTCGCCGCCGAGGCCGCACGTCGCGGCGTTCCGCCGCCTCGGTGCACGTCCCTCGT 193
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CGCCGTCGCCGGCGAGGCCGCACGTCGCGGCGTGGCGCCGCCGCGTTGCACGTCGCTCGT 840
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      GGCGATGTACGGCCTCATGTGGCACTGCTACCGCCGCTCCAGACGGGAAAGCGACAACGG 253
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      CGCCACGCTCGGCCTCACGTGGCTGTGCTTCCGCCGCGCTGGGCC------CGACGGCGA 894
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      CGGCAGCGGCCGTGCCGCCGCCGCCGCCCACTTCATCTTCTCCGTCGACCACCGGTCGCG 313
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      AGAAGGGCCTCGCGGTGACGGCCGCGCCCACCTCGTCTTCCCCGTCGACCACCGGTCGCG 954
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      GCTGGTGCCCCGCGTCCCCGACAAGTACCTCGGCAACTGCGTCGGCCCGGGCTTCGTCTC 373
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      GCTGGAGCCCCGCGTCCCCGAAAAGTACCTCGGCAACTGCATCGGCCCGGGCTTTGCCAC 1014
consensus_13269#2      ------------------------------------------------------------
consensus_13269#3      ------------------------------------------------------------
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      GGCGCCCGAGGAGGAGCTCGCCGGCGCCGCCGTG---GCGGGCGGCGTCTTCACGGCCTG 430
consensus_13269#5      ------------------------------------------------------------
consensus_13269#0      GGCACACGAGACGGAGCTCGCCACCACCACCACCACCGCCGATGGCCTCTTCACGGCTTG 1074
consensus_13269#2      ---------------------------------------------CCTCTTCACGACCTG 15
consensus_13269#3      ----------------------------------------------------------TG 2
consensus_13269#4      ------------------------------------------------------------
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      CGCGGCGGTGGCCGCCGCCATCGACGAGGCGGTGCGCGGCGAGCCCGCGTACTGGGAGGG 490
consensus_13269#5      -----------------------TCGCGGCGGAG-GTATCGTTCTGGCGTCC--GGCGGC 34
consensus_13269#0      CGCCGCGGTCGCCGCCGGCATCGACGAGGCGGTGCGCGGCGAGCCGACATACTGGGAGCG 1134
consensus_13269#2      CGCCGCGATCGCCGCCGCCATCGACGAAGGAACGAGATACGATCCCGGCTACTGGGAGAG 75
consensus_13269#3      CGCCGCGATCGCCGCCGCNATCGACGAAGGAACGAGATACGATCCCGGCTACTGGGAGAG 62
consensus_13269#4      ----------------------------------AGTTACGTTCCGGACTACTGGAAGAG 26
consensus_13269#6      ------------------------------------------------------------
                                                                                   

consensus_13269#1      GTGGAAGGAGCGCATCGTGGAGGCGTGCAGGGACGACGC---GCCGTTCTCGGTGGCCGG 547
consensus_13269#5      ATCGAGGTGG-GCATAGCTATGC--TGCCGGAGCGCATG---GACACGTTCCGGAGGTGC 88
consensus_13269#0      GTGGGTGGAGCGCATCACCGAGGCGTGCGCGGACGACAT---GTCGCTGTCCGTGGCAGG 1191
consensus_13269#2      GTGCAGGGAGCACGTCAGAGGGATGAGCACGAGCGACGGCCCGCCGCTAGCGGTGGCCGG 135
consensus_13269#3      GTGCAGGGAGCACGTCAGAGGGATGAGCACGAGCGACGGCCCGCCGCTAGCGGTGGCCGG 122
consensus_13269#4      GTGCATGGAACACGTTGGAGGGATGAGCGCGAGCNTCGGTCCGCCGTTAGCG-TGGCCGG 85
consensus_13269#6      ---------------------------GACCACCATGTGCTCCCCGCTTTCG-TG--CTG 30
                                                        *          *     *         

consensus_13269#1      GTCGACGAGGTTCCGCGTGTACGACGTCGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGA 607
consensus_13269#5      CTCGCCGACGCCATG-----GCTTGGTTTTCCTCGTCTTCCCAATGC-AACTAGCGTGGG 142
consensus_13269#0      ATCGACGAGGTTCGGCGTGTACGACATGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGA 1251
consensus_13269#2      GTCGCCGAGGTTCCGCGTGTACGACGTGGACTTTGGGTTCGGGAGGCCGACGAAGGTGGA 195
consensus_13269#3      GTCGCCGAGGTTCCGCGTNTACGACGTGGACTTTGGGTTCGGGAGGCCGACGAAGGTGGA 182
consensus_13269#4      GTCGCCGAGGTTCCGCGTGTACGACGTGGACTTCGGGTTCGGGAGGCCGGCGAAGGTGGA 145
consensus_13269#6      GTC-CCGAGGTTCCGCGTGTACGAC-TGGACTTTGG-TTCGGGAG-CCGGCGAAGGTGGA 86
                        **  *** *    *      *    *   * * *  ***   *  *   * *  **** 

consensus_13269#1      GATCGTGTCCGTGGCGAAGACCGGCGCGGTGTCGGCGGCGGAGGATCGTTCTGGCGCCGG 667
consensus_13269#5      AACTGCAAC----ACGTACGTCGAGTAGATTTCNTTAG-AGAGATTCGGTTTT---CCAA 194
consensus_13269#0      TGTCGTGTCCGTGGCGAAGACCGACGCGATGTCGGTGGCCGAGGACCGTTCCGGCTCCGG 1311
consensus_13269#2      CGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGGTGGCGGAGGGCCGCGGCG------G 249
consensus_13269#3      CGTCGTGTCCGTGGCGAAGACCGGGGCGATNTCGGTGGCGGAGGGCCGCGGCG------G 236
consensus_13269#4      CGTCGTGTCCGTGGCGAAGACCGGGGCGATCTCGGTGGCGGAGGGCCGCCGCG------G 199
consensus_13269#6      CGTCGTGTCCGTGGCCAAGACCGGGGCGATGTCGGTGGCGG------------------- 127
                           *   *     *  *   **    * * **    *  *                   

consensus_13269#1      CGGCATCGAGGTGGGCATAGCTCTGCTGCCGGAGCGCATGGACACGTTCCGGAGGTGCCT 727
consensus_13269#5      GTCTATTTGCTGGCTTATACTCTCTCTGTGCAAAAGAATAAAAAA---TCAAAATCAAAC 251
consensus_13269#0      CGGCATCGAGGTGGGCATCGCTCTGTCGCCGGCGCGCATGGAGCGGTTCCGGAGGTGGCT 1371
consensus_13269#2      CGGCATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTT 309
consensus_13269#3      CGGCATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTT 296
consensus_13269#4      CG-CATTGAGGTGGGCGTCGGTTTGCCGCCGGAGCG-ATGGAGAGGTTCCGGAGGTGCTT 257
consensus_13269#6      CGGCCTTGAGGTGGGCATCGCTTTGCCGCCGGAGCGGATGGAGAGGTTCCGGAGGTGCTT 187
                            *      *    *         *       * **  *       *  *       

consensus_13269#1      CGCCGACGCCATGGC-TTGGTTTTCCTCGTCTT----CCCAATGCAACTA-GCGTGGGAA 781
consensus_13269#5      CAGCGATGA-ATGACATTGGCCTTGTTTAGTT------CCAAGTTTTTTT-CTAAACTTT 303
consensus_13269#0      CGCCGACGCCATCGC-CCTGCTCTCCTCGTCTT----CCCACTGCAACTAGCTAGGGTGG 1426
consensus_13269#2      CACTGATGCCGTCACGTGGCTATCGTCGCCATC---GTCCAGTGACACGTGACACGTGGC 366
consensus_13269#3      CACTGATGCCGTCACGTGGCTATCGTCGCCATC---GTCCAGTGACACGTGACACGTGGC 353
consensus_13269#4      CGCTGATGCCGTCGCGTGGCTATCGTCGCCGTCTC-GTCCAGTGACACGTGACATGGATC 316
consensus_13269#6      CGGCGAAGACGTCGCCGTCGCGTGGCCGTCGTCGTGATCCAGTGATAAGTGGCCTTGAAT 247
                       *   ** *   *  *                *      ***                   

consensus_13269#1      CTGCAACACGTAC-----GTCGAGTAGATTTCTTTAGAGAGATTCGGTTTTCATGTCTTT 836
consensus_13269#5      CAACNGTTCCCAT-----CACATGCAATCTGTCCTACACACATAAACTNTCAATCACATC 358
consensus_13269#0      AATCTGCAAAAAT-----AATTAAGTATTTTGCTTGAATTCTAGAACTTTGAATT-TATT 1480
consensus_13269#2      GCGCGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCG-TGGGCTTCGATG-GGCT 424
consensus_13269#3      GCGCGGCAGGCAGGCAGGCAGGCACGTGTCGCTTGGCTTTCG-TGGGCTTCGATG-GGCT 411
consensus_13269#4      GATCAGC---------------TCCGGGCCACTCC-CCGGCG-TAGGCGGCGGCG-GCAG 358
consensus_13269#6      ATATGTC-----------CATAGCGGGGCCGCCTAATGGGCGACTGGTCGCGGAG-GGGC 295
                                                                                   

consensus_13269#1      TTGCTGGCTTATACTCTCTCTGTGAAAAAAGAAATCAAAACCTGGGATGAATCCAC-ACA 895
consensus_13269#5      GTTCTAATTTTCAACCAACTTCC----------ACTTCGGCGCGAACTAAACACACCATA 408
consensus_13269#0      ACCCTAA---AAAATCTAATCCTTTGAATC------------------------------ 1507
consensus_13269#2      GCTTCCGTCAGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGATTGA 484
consensus_13269#3      GCTTCCGTCAGCTATCACGTGCGTGCCCTATGTGAGCCGTCGGATGGCTTGGACGATTGA 471
consensus_13269#4      GCAG--GCAGGCAGGCAGGCACGTG--------------TCGCTTGGCTTCCAC--TCGC 400
consensus_13269#6      GTGGGCGCACGCCCCGCGCCGCTTCTGCTCTACTAG---ACTACTAGCTACTACG--TGC 350
                                                                                   

consensus_13269#1      TGTATGTTAATATTCATCCCTTGGGTTTGATTCTTTTTAGAACTTTATAATTTAATTTT- 954
consensus_13269#5      TGTGTGGTCAGATTCATCT-TTAGGTTTGATTCCTTTTAGAAATTTATAATTNAATTTT- 466
consensus_13269#0      ------------------------------------------------------------
consensus_13269#2      TAAGTGCTGAAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTCTTTTTTTTTTT 544
consensus_13269#3      TAAGTGCTGAAGGCACGCTATATGCACATGCACCCCGGACGCTTTGCTCTTTTTTTTTT- 530
consensus_13269#4      TGGGCTTCCGTGGGATTCGAT--GGGCTGGTTCCCCGTAC-CCTTATTTTTTTTCTT--- 454
consensus_13269#6      AGTACNACTAGTCTACTCTGTTGCTGTATGATACTACTGCTATGTAGTCTGTACTACTC- 409
                                                                                   

consensus_13269#1      ----GGTGATTGTATTTTTATGCCTACTACTTTTAAAATTCTAGTAATAATT-------- 1002
consensus_13269#5      ----GGTGATTGTATNTTNATCTCTACTACNTTTAAACTGCTAGTAATAATTATTTACCN 522
consensus_13269#0      ------------------------------------------------------------
consensus_13269#2      AAGAGAATACCGTAGTATTGTATCGAC-GTATCCGTATCCCAATATCCATCCCTATTTAA 603
consensus_13269#3      AAGAGAATACCGTAGTATTGTATCGAC-GTATCCGTATCCCAATATCCATCCCTATTTAA 589
consensus_13269#4      -GGAAAATACCGTAGCATTGTACCGACAGGGTGTGTTCGCTAAGTTGCCAGCGTGGAACA 513
consensus_13269#6      -----CAT-CCGTCCCTTAATATAAGAGGTTTTAATATTTTA----CTTACCCTATTTGA 459
                                                                                   

consensus_13269#1      ------------------------------------------------------------
consensus_13269#5      ATAAAAA----------------------------------------------------- 529
consensus_13269#0      ------------------------------------------------------------
consensus_13269#2      AACATATATGGATTTTTCTCATCGTCGCAGATAAATTTGTAATGAAAAAAACAAATTAAA 663
consensus_13269#3      AACAAAAAAAAA----------------AAAAAAAAAAAAAAAAAAAAAAA--------- 624
consensus_13269#4      GTCTGCATGGTATGCATGGTAAACAGAGGTATTAGCGTGTGAAAAAAAAAAA-------- 565
consensus_13269#6      CCCTTCATCTTA--------ATAAAAAAAAGTTTAGATTTAAAAAAAAAA---------- 501
                                                                                   

consensus_13269#1      -------
consensus_13269#5      -------
consensus_13269#0      -------
consensus_13269#2      CTACAGC 670
consensus_13269#3      -------
consensus_13269#4      -------
consensus_13269#6      -------
                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)