These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_13346#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1573 fasta sequence [TCCCCTTCTCCATCTACCTGTCTGTCCCCCAATTCCCCACTTCCCCAACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC-GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGTGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTTCTACTTCTTGCTGCCCACCCGGTCCATCTTCGCGTCCGCCGCCGCTGCTCGGCATCCGCCTATCATCCCGCAGCAGATG-CCTCCACCATCCTATGTGCGGACAGGCCG-CCCTCGTCTGTCTGAATTTCATGACAGGTCCTTTGAGGGTGACTATGGCCGGGAGGGTGATGAGATTGGGAATGGTATCAGTGAGAGTGGTGGGATGAGGGGGAAGTTGATTAAGAGGAACAAGAAGCTGTCCGCGGAGTCGGAGATGTATGGCGGGCACCGGATCAATGTTGAAGCAATCGGGACACTCGGTGAAGACAGCAGATCAGAAATAAGATCAAGGGGTGACAGGGATATGGATAACCAGCACATCCTGCAAGCAGAAGAAAAGGATGTAGTGTCATCTGTTGCAACAGTGTTATCTGACCTCTGTGGTCCTGGAGAATGGATGCCTATGGCAAAACTCCACACAGAGCTTCTTGAACAGTTTGGCAATGTGTGGCACCACAGCAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCAACTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGCATTTTGCTGATTGGAAGATTTTGAAACTTTGCCGTAAAAAAAGAAGTGTAGTTG] [+] EMBL AK103731 [TCCCCTTCTCCATCTACCTGTCTGTCCCCCAATTCCCCACTTCCCCAACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGTGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTTCTACTTCTTGCTGCCCACCCGGTCCATCTTCGCGTCCGCCGCCGCTGCTCGGCATCCGCCTATCATCCCGCAGCAGATGCCCTCCACCATCCTATGTGCGGACAGGCCG CCCTCGTCTGTCTGAATTTCATGACAGGTCCTTTGAGGGTGACTATGGCCGGGAGGGTGATGAGATTGGGAATGGTATCAGTGAGAGTGGTGGGATGAGGGGGAAGTTGATTAAGAGGAACAAGAAGCTGT GCGGAGTCGGAGATGTATGGCGGGCACCGGATCAATGTTGAAGCAATCGGGACACTCGGTGAAGACAGCAGATCAGAAATAAGATCAAGGGGTGACAGGGATATGGATAACCAGCACATCCTGCAAGCAGAAGAAAAGGATGTAGTGTCATCTGTTGCAACAGTGTTATCTGACCTCTGTGGTCCTGGAGAATGGATGCCTATGGCAAAACTCCACACAGAGCTTCTTGAACAGTTTGGCAATGTGTGGCACCACAGCAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCAACTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGCATTTTGCTGATTGGAAGATTTTGA ] [+] EMBL AK065800 [ CCCTTCTCCATCTACCTGTCTGTCCCCCAATTCCCCACTTCCCCAACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACGCTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGTGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTTCTACTTCTTGCTGCCCACCCGGTCCATCTTCGCGTCCGCCGCCGCTGCTCGGCATCCGCCTATCATCCCGCAGCAGATG CCTCCACCATCCTATGTGCGGACAGGCCG CCCTCGTCTGTCTGAATTTCATGACAGGTCCTTTGAGGGTGACTATGGCCGGGAGGGTGATGAGATTGGGAATGGTATCAGTGAGAGTGGTGGGATGAGGGGGAAGTTGATTAAGAGGAACAAGAAGCTGTCCGCGGAGTCGGAGATGTATGGCGGGCACCGGATCAATGTTGAAGCAATCGGGACACTCGGTGAAGACAGCAGATCAGAAATAAGATCAAGGGGTGACAGGGATATGGATAACCAGCACATCCTGCAAGCAGAAGAAAAGGATGTAGTGTCATCTGTTGCAACAGTGTTATCTGACCTCTGTGGTCCTGGAGAATGGATGCCTATGGCAAAACTCCACACAGAGCTTCTTGAACAGTTTGGCAATGTGTGGCAACACAGCAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCAACTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGCATTTTGCTGATTGGAAGATTTTGAAACTTTGCCGTACTCGAAGAAGTGTAGTTG] [+] EMBL CB672141 [ ATCTACCTGTCTGTCCCCCAATTCCCCACTTCCCCAACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGAGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTGCTACTTCTTGCTGCCCACCCGGTCCATCTTCGCGTCCGCCGCCGCTGCTCGGCATGCGCCTA ] [+] EMBL CB663753 [ CCACTTCCCCAACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGTGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTTCTACTTCTTGCTGACCACCCGGTCCATCTTCGCGTCCGCCGCCGCTGCTCGGTATCCGCCTATCATCCCGCAGGAGATG CCTCCACCATCCTATGTGCGGACAGGCCGCCCCTCGTC ] [+] EMBL AU166493 [ AACCCAGGCGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGAGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTC GGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGT ] [+] EMBL CB663752 [ CCAGGTGATCCTCCGCCGCCGCCGCCGGCGGCCGGCCGCCTCCCTCCGCCGCCACGCAGCCGCGCCCCCTCCGCCGGACACTCCAGACCCCGGTGAGCCTCCCCTCCTCCGCCGGCCGCCTTGCCCGCGCCCGAACGCCACGCCAAGCTCAGGATCATTTCGTCGATTTCGTGGATTGGATGGCCAACCTTGGCGGTGGCGCGATGCCGGCGGGATCCTCGGGCGGCGACGGCGAGGTGGAGGCCGGGTTCGCGAAGCTCCAGGGGGAGGATTTCGAGTACTACATGCAGACCTACTCGATCATGCTGGGGCGCAACAGCAAGAAGTCGACGGTGGACGTGGACCTCTCCAGCCTCGGGCGGCGGGATGAACATCTCGCGCCACCACGCCCGGATCTTCTACGACTTCCAGCGCCGCCGCTTCGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGG ] [+] EMBL AU062752 [ CCGGNTCTTCTACGACTTCCAGCGCCGCCGCTTNGCGCTCGACGTGATCGGCAAGAACGGGTGCCTCGTCGAGGGCGTCCTCCACCTCCCCGGGAACCACCCCGTGAAGCTGGATTCCCAGGATCTGCTCCAGATTGGGGACAAGAAGTTCTACTTCTTGCTGCCCACCCGGTNCATCTTCGNGTCCGNCGCCGCTGCTCGGCATCCGNCTATCATCCCGCAGCAGATG CCTCCACCATCCTATGTGCGGACAGGCCG NCCTTGTNTGTCTGAATTTCATGACAGGTCCTTTGAGGGT ] [-] EMBL CB663754 [ AATGGTATCAGTGAGAGTGGTGGGATGAGGGGGAAGTTGATTAAGAGGAACAAGAAGCTGTCCGCGGAGTCGGAGATGTATGGCGGGCACCGGATCAATGTTGAAGCAATCGGGACACTCGGTGAAGACAGCAGATCAGAAATAAGATCAAGGGGTGACAGGGATATGGATAACCAGCACATCCTGCAAGCAGAAGAAAAGGATGTAGTGTCATCTGTTGCAACAGTGTTATCTGACCTCTGTGGTCCTGGAGAATGGATGCCTATGGCAAAACTCCACACAGAGCTTCTTGAACAGTTTGGCAATGTGTGGCACCACAGCAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCAACTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATTTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGC ] [-] EMBL CB672142 [ GCAATCGGGACACTCGGTGAAGACAGCAGATCAGAAATAAGATCAAGGGGTGACAGGGATATGGATAACCAGCACATCCTGCAAGCAGAAGAAAAGGATGTAGTGTCATCTGTTGCAACAGTGTTATCTGACCTCTGTGGTCCTGGAGAATGGATGCCTATGGCAAAACTCCACACAGAGCTTCTTGAACAGTTTGGCAATGTGTGGCACCACAGCAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCACCTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGTTGAGGAAGTATCCGGACCATTTTGTCATCATCACAAGATCGAAAGGCAGGGTATCATCGGAGTTCGTCTCGATGGTCTCTTTGCTCTCCTAGAGGTAACCTGGGCCTTGGCATAATATGTTCTCACCGTTCTGGCCCT CCGAAGAATGATTGGCATCTTCAATCGCTCAAGTGAATTGAAGCgct ] [+] EMBL BM419772 [ aatTGTGTGGCACCACA CAGGGTCCGGAAGTACCTTTCACCAGAGGACTGGTCGCCAACTGAAACCAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTNTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTGACAGCACTTTGCTGATTGGAAGATTTTGAAACTTTGCCGTAAAAAAAAAA ] [+] EMBL AU166494 [ CTGGTCGCCAACTGAAACAAAAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGATCGAAAGGCAGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCTCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTGAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGCATTTTGCTGATTGGAAGATTTTGAAACTTTGCCGTAAAAAA ] [+] EMBL AU100772 [ AAGGTAGGCCATGGTACGGTCTCCTTGCATTGCTGAGGAAGTATCCGGAACATTTTGTCATCAACACAAGNTCGAAAGGCNGGGTAACATCGGAGTTCGTCTCGCTGGTCTCTTTGCNCTCCTAGAGGTAACCTGGACCGTGGCATAATCTGTTCTCACCGTTCTGGCCCTGCTNAAGAATGATTCGCATCTTCAATCGCTGAACTGAATTGAAGCCTGTTGTACTTTACTGGCCTGTGTTTACCCTTAGCTATGTAATCCGGAGAAATACATAGGGAAACAGGATTTTAACTTATGTTAGTAGCTGGGTTCATGTCTCACTGTTGTGTGGGGTGAGAATGTATGTCTAGTGTTGTTGAGACTGGAAGCGCGAAAGTTCACAGCATTTTGCTGATTGGAAGATTTAAAAAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||