cluster # 1336

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Oryza sativa
cluster # 1336 cluster # 1336 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1336#0 length = 845 sequences # 2

consensusID : consensus_1336#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 845
fasta sequence

                              [CCCAGATCTTTCCGCTCCTCCTCCTCGTCGTCGTCTTCCTCCTCTTTCCTCCTCCTCCCCGTCTCTCCCTCTCCGCTTCTCTCTCCCACCAACCCCCCGCCCCCACCCATGGCGCTCGCATCCGGCACGTCCTGCGCCCTCCCCGGCGCCGCGCGCCCCCACCTCGCCGTGTCCCCCTCTCCGCCCGCCTCCTCGATCCGTTTCTGCAGAGGCGGCTCCCGCGGAGGCAGGGCCGTCGTCTCCCTCCGCGCCTCCGTGCCTCCAGCAGCAGCGGCAGCAACAACATCTGGTAGCATTGCACCTGCAATTTCATTGACTGAAAAGGCTTTGAAGCATCTGAATAAAATGAGGGCTGAACGGAATGAAGATCTCTGTTTGAGAATTGGAGTTAGGCAAGGTGGATGTTCTGGCATGTCTTACACCATGGAGTTTGAAGATCGATCCAATGCCAGCCCTGATGATTCAGTTGTAGAATATGATGGCTTTGCAATAGTCTGCGACCCGAAGAGCCTTCTTTTCATGTTTGGAATGGAGCTGGACTACAGTGACGCCCTTATCGGTGGGGGATTCGGCTTCCAGAANCC-AATGC-ACCAAGACATGTGGGTGTGGCAAATCTTTCGCCACCGGAAAAGAAACAGAGAGCACAGCAACAGCCTGCAACAACTAAGCTAGAAACATATAGGTGGAAATGCCATATATATAGCTCACCCTTGACAAAATGTTCTATGGATATACCACAGATGAATACTCGAAACTCAGAAGTGTAACGATTTTCATTACAGTTTGTGTGTATCACTGTATCCAATTGGACAAATTACTGCTCGATAGAATTCAAAGATAGTTAC]

[+] EMBL CA754115             [CCCAGATCTTTCCGCTCCTCCTCCTCGTCGTCGTCTTCCTCCTCTTTCCTCCTCCTCCCCGTCTCTCCCTCTCCGCTTCTCTCTCCCACCAACCCCCCGCCCCCACCCATGGCGCTCGCATCCGGCACGTCCTGCGCCCTCCCCGGCGCCGCGCGCCCCCACCTCGCCGTGTCCCCCTCTCCGCCCGCCTCCTCGATCCGTTTCTGCAGAGGCGGCTCCCGCGGAGGCAGGGCCGTCGTCTCCCTCCGCGCCTCCGTGCCTCCAGCAGCAGCGGCAGCAACAACATCTGGTAGCATTGCACCTGCAATTTCATTGACTGAAAAGGCTTTGAAGCATCTGAATAAAATGAGGGCTGAACGGAATGAAGATCTCTGTTTGAGAATTGGAGTTAGGCAAGGTGGATGTTCTGGCATGTCTTACACCATGGAGTTTGAAGATCGATCCAATGCCAGCCCTGATGATTCAGTTGTAGAATATGATGGCTTTGCAATAGTCTGCGACCCGAAGAGCCTTCTTTTCATGTTTGGAATGGAGCTGGACTACAGTGACGCCCTTATCGGTGGGGGATTCGGCTTCCAGAANCC AATGC ACCAAGACATGTGGGTGTGGCA                                                                                                                                                                                                                                          ]
[+] EMBL AK070964             [           CCGCTCCTCCTCCTCGTCGTCGTCTTCCTCCTCTTTCCTCCTCCTCCCCGTCTCTCCCTCTCCGCTTCTCTCTCCCACCAACCCCCCGCCCCCACCCATGGCGCTCGCATCCGGCACGTCCTGCGCCCTCCCCGGCGCCGCGCGCCCCCACCTCGCCGTGTCCCCCTCTCCGCCCGCCTCCTCGATCCGTTTCTGCAGAGGCGGCTCCCGCGGAGGCAGGGCCGTCGTCTCCCTCCGCGCCTCCGTGCCTCCAGCAGCAGCGGCAGCAACAACATCTGGTAGCATTGCACCTGCAATTTCATTGACTGAAAAGGCTTTGAAGCATCTGAATAAAATGAGGGCTGAACGGAATGAAGATCTCTGTTTGAGAATTGGAGTTAGGCAAGGTGGATGTTCTGGCATGTCTTACACCATGGAGTTTGAAGATCGATCCAATGCCAGCCCTGATGATTCAGTTGTAGAATATGATGGCTTTGCAATAGTCTGCGACCCGAAGAGCCTTCTTTTCATGTTTGGAATGGAGCTGGACTACAGTGACGCCCTTATCGGTGGTGGATTCGCCTTCCAGAACCCAAATGCAACAAAGACATGTGGGTGTGGCAAATCTTTCGCCACCGGAAAAGAAACAGAGAGCACAGCAACAGCCTGCAACAACTAAGCTAGAAACATATAGGTGGAAATGCCATATATATAGCTCACCCTTGACAAAATGTTCTATGGATATACCACAGATGAATACTCGAAACTCAGAAGTGTAACGATTTTCATTACAGTTTGTGTGTATCACTGTATCCAATTGGACAAATTACTGCTCGATAGAATTCAAAGATAGTTAC]




>consensus_1336#0
CCCAGATCTTTCCGCTCCTCCTCCTCGTCGTCGTCTTCCTCCTCTTTCCTCCTCCTCCCC
GTCTCTCCCTCTCCGCTTCTCTCTCCCACCAACCCCCCGCCCCCACCCATGGCGCTCGCA
TCCGGCACGTCCTGCGCCCTCCCCGGCGCCGCGCGCCCCCACCTCGCCGTGTCCCCCTCT
CCGCCCGCCTCCTCGATCCGTTTCTGCAGAGGCGGCTCCCGCGGAGGCAGGGCCGTCGTC
TCCCTCCGCGCCTCCGTGCCTCCAGCAGCAGCGGCAGCAACAACATCTGGTAGCATTGCA
CCTGCAATTTCATTGACTGAAAAGGCTTTGAAGCATCTGAATAAAATGAGGGCTGAACGG
AATGAAGATCTCTGTTTGAGAATTGGAGTTAGGCAAGGTGGATGTTCTGGCATGTCTTAC
ACCATGGAGTTTGAAGATCGATCCAATGCCAGCCCTGATGATTCAGTTGTAGAATATGAT
GGCTTTGCAATAGTCTGCGACCCGAAGAGCCTTCTTTTCATGTTTGGAATGGAGCTGGAC
TACAGTGACGCCCTTATCGGTGGGGGATTCGGCTTCCAGAANCCAATGCACCAAGACATG
TGGGTGTGGCAAATCTTTCGCCACCGGAAAAGAAACAGAGAGCACAGCAACAGCCTGCAA
CAACTAAGCTAGAAACATATAGGTGGAAATGCCATATATATAGCTCACCCTTGACAAAAT
GTTCTATGGATATACCACAGATGAATACTCGAAACTCAGAAGTGTAACGATTTTCATTAC
AGTTTGTGTGTATCACTGTATCCAATTGGACAAATTACTGCTCGATAGAATTCAAAGATA
GTTAC

clustalw multiple alignements is not computed in this case