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Oryza sativa
cluster # 13392 cluster # 13392       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13392#0 length = 1125 sequences # 11  
consensus_13392#1 length = 746 sequences # 1  
consensus_13392#2 length = 355 sequences # 1  

consensusID : consensus_13392#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1125
fasta sequence
                              [ACTTTTCCTTCCACGCTAAGGCAAACAGCGCAACGCAGCACACAACACAAGCACTAGCTGCTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATCGAGCGAACAGCCATGAGGAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTGACCGCCAA-GGCGTTTGGCATAGAGGAGGAGG-TG-TCGTTGGCCAGGGGCCAGTCGTTCAGGAAGGCCGACGGCGATCACCTTGCGGTCTCGTTGTCGCACCCCAGCCCTTATACGTCTTTCGGCTATAAGCACAGCAGCAAGGGTCAGGTTATCCACTGGGTGAGCAAGCTGAGCAGAAGGGCACAGGGCTTCAGGGAGCATGTGACCTTGGGGCCAAAGCTGTCGGAGACGGTGAAGGGGAAGCTGAGCCTGGGCGCGAAAATCCTGCAGGCCGGCGGGATCGAGCGCGTGTTCCGGAAGGCGTTCTCGGCGGAGAAAGGCGAGCGGCTGGTGAAGGCGCTGCAGTGCTACCTGTACACCACCGGCGGGCCCATCGCCGGGATGCTCTTCGTCTCCACCAAGAAGGTCGCCTTCCGCAGCGACCGGCCGGTCACGGTCACCTCGGCCAAGGGCGACGTCGCGCGGGTGCCCTACAAGGTGGTGGTCCCGCTCAGGAGGATCGCCCAGGTGCGGCCGAGCGAGAATGCCGACAAGCCGGAGGAGAAGTACATCCACGTCGTCACGGTGGACGGCTTCGAGTTCTGGTTCATGGGGTTCGTGAGCTACCAGAGGTCGTGCAAGTACATGCAGCAAGCCATCTCGGAGCTGCAATGACTAGTGCGCGTGCATGTTGGTGGTCTGGTGGTGATCGCGAGGTCCACTATTGTTTGTTCCGTCGGCACGATGAGAAGAGAAGTTATGGGCTGCTGCGCCGTCTTTTGTTGCGAGGCAGCCCTGGCTGAAGTTGCTCGATCTTATTTCGGGTTCTTCCGCGTA-CGATTTGGATTGACATTATGTGTGTTCTTTCAAATACTAGTAGCTAGTATTTTGTACGATGGGCCGCGAAAATTAACCATGACCCGTGTTGATGAATGGAAAATTTTAAGTTGTTCAGATCAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF310508             [ACTTTTCCTTCCACGCTAAGGCAAACAGCGCAACGCAGCACACAACACAAGCACTAGCTGCTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATCGAGCGAACAGCCATGAGGAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTGACCGCCAA GGCGTTTGGCATAGAGGAGGAGG TG TCGTTGGCCAGGGGCCAGTCGTTCAGGAAGGCCGACGGCGATCACCTTGCGGTCTCGTTGTCGCACCCCAGCCCTTATACGTCTTTCGGCTATAAGCACAGCAGCAAGGGTCAGGTTATCCACTGGGTGAGCAAGCTGAGCAGAAGGGCACAGGGCTTCAGGGAGCATGTGACCTTGGGGCCAAAGCTGTCGGAGACGGTGAAGGGGAAGCTGAGCCTGGGCGCGAAAATCCTGCAGGCCGGCGGGATCGAGCGCGTGTTCCGGAAGGCGTTCTCGGCGGAGAAAGGCGAGCGGCTGGTGAAGGCGCTGCAGTGCTACCTGTACACCACCGGCGGGCCCATCGCCGGGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF309133             [ACTTTTCCTTCCACGCTAAGGCAAACAGCGCAACGCAGCACACAACACAAGCACTAGCTGCTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATCGAGCGAACAGCCATGAGGAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTGACCGCCAAGGGCGTTTGGCATAGAGGAGGAGG TGTTCGTTGGCCAGGGGCCAGTCGTTCAGGAAGGCCGACGGCGATCACCTTGCGGTCTCGTTGTCGCACCCCAGCCCTTATACGTCTTTCGGCTATAAGCACAGCAGCAAGGGTCAGGTTATCCACTGGGTGAGCAAGCTGAGCAGAAGGGCACAGGGCTTCAGGGAGCATGTGACCTTGGGGCCAAAGCTGTCGGAGACGGTGAAGGGGAAGCTGAGCCTGGGCGCGAAAATCCTGCAGGCCGGCGGGATCGAGCGCGTGTTCCGGAAGGCGTTCTCGGCGGAGAAAGGCGAGCGGCGGGTGAAGGCGCTGCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF310116             [ACTTTTCCTTCCACGCTAAGGCAAACAGCGCAACGCAGCACACAACACAAGCACTAGCTGCTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATCGAGCGAACAGCCATGAGGAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTGACCGCCAA GGCGTTTGGCATAGAGGAGGAGGCTG TCGTTGGCCAGGGGCCAGTCGTTCAGGAAGGCCGACGGCGATCACCTTGCGGTCTCGTTGTCGCACCCCAGCCCTTATACGTCTTTCGGCTATAAGCACAGCAGCAAGGGTCAGGTTATCCACTGGGTGAGCAAGCTGAGCAGAAGGGCACAGGGCTTCAGGGAGCATGTGACCTTGGGGCCAAAGCTGTCGGAGACGGTGAAGGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF308260             [ACTTTTCCTTCCACGCTAAGGCAAACAGCGCAACGCAGCACACAACACAAGCACTAGCTGCTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATCGAGCGAACAGCCATGAGGAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTGACCGCCAA GGCGTTTGGCATAGAGGAGGAGG TG TCGTTGGCCAGGGGCCAGTCGTTCAGGAAGGCCGACGGCGATCACCTTGCGGTCTCGTTGTCGCACCCCAGCCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK061581             [ CTTTTCCTTCCACGCTAAGGCAAACAGCGCAACGCAGCACACAACACAAGCACTAGCTGCTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATCGAGCGAACAGCCATGAGGAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTGACCGCCAA GGCGTTTGGCATAGAGGAGGAGG TG TCGTTGGCCAGGGGCCAGTCGTTCAGGAAGGCCGACGGCGATCACCTTGCGGTCTCGTTGTCGCACCCCAGCCCTTATACGTCTTTCGGCTATAAGCACAGCAGCAAGGGTCAGGTTATCCACTGGGTGAGCAAGCTGAGCAGAAGGGCACAGGGCTTCAGGGAGCATGTGACCTTGGGGCCAAAGCTGTCGGAGACGGTGAAGGGGAAGCTGAGCCTGGGCGCGAAAATCCTGCAGGCCGGCGGGATCGAGCGCGTGTTCCGGAAGGCGTTCTCGGCGGAGAAAGGCGAGCGGCTGGTGAAGGCGCTGCAGTGCTACCTGTACACCACCGGCGGGCCCATCGCCGGGATGCTCTTCGTCTCCACCAAGAAGGTCGCCTTCCGCAGCGACCGGCCGGTCACGGTCACCTCGGCCAAGGGCGACGTCGCGCGGGTGCCCTACAAGGTGGTGGTCCCGCTCAGGAGGATCGCCCAGGTGCGGCCGAGCGAGAATGCCGACAAGCCGGAGGAGAAGTACATCCACGTCGTCACGGTGGACGGCTTCGAGTTCTGGTTCATGGGGTTCGTGAGCTACCAGAGGTCGTGCAAGTACATGCAGCAAGCCATCTCGGAGCTGCAATGACTAGTGCGCGTGCATGTTGGTGGTCTGGTGGTGATCGCGAGGTCCACTATTGTTTGTTCCGTCGGCACGATGAGAAGAGAAGTTATGGGCTGCTGCGCCGTCTTTTGTTGCGAGGCAGCCCTGGCTGAAGTTGCTCGATCTTATTTCGGGTTCTTCCGCGTA CGATTTGGATTGACATTATGTGTGTTCTTTCAAATACTAGTAGCTAGTATTTTGTACGATGGGCCGCGAAAATTAACCATGACCCGTGTTGATGAATGGAAAATTT                                        ]
[-] EMBL CF308261             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCTCGGCCAAGGGCGACGTCGCGCGGGTGCCCTACAAGGTGGTGGTCCCGCTCAGGAGGATCGCCCAGGTGCGGCCGAGCGAGAATGCCGACAAGCCGGAGGAGAAGTACATCCACGTCGTCACGGTGGACGGCTTCGAGTTCTGGTTCATGGGGTTCGTGAGCTACCAGAGGTCGTGCAAGTACATGCAGCAAGCCATCTCGGAGCTGCAATGACTAGTGCGCGTGCATGTTGGTGGTCTGGTGGTGATCGCGAGGTCCACTATTGTTTGTTCCGTCGGCACGATGAGAAGAGAAGTTATGGGCTGCTGCGCCGTCTTTTGTTGCGAGGCAGCCCTGGCTGAAGTTGCTCGATCTTATTTCGGGTTCTTCCGCGTA CGATTTGGATTGACATTATGTGTGTTCTTTCAAATACTAGTAGCTAGTATTTTGTACGATGGGCCGCGAAAATTAACCATGACCCGTGTTGATGAATGGAAAATTTTAAGTTGTTCAGATCCAAAAAAA                 ]
[-] EMBL CF309134             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGGTGGTGGTCCCGCTCAGGAGGATCGCCCAGGTGCGGCCGAGCGAGAATGCCGACAAGCCGGAGGAGAAGTACATCCACGTCGTCACGGTGGACGGCTTCGAGTTTTGGTTCATGGGGTTCGTGAGCTACCAGAGGTCGTGCAAGTACATGCAGCAAGCCATTTGGGAGCTGCAATGACTAGGGGGCGTGCATGTTGGTGGTCTGGTGGTGATCGCAAGGTCCACTATTGTTTGTTCCGTCGGCCCGATGAAAAAAGAAGTTATGGGCTGTTGCCCCGTTTTTTGTTGCAAGGCAGCCCTGGCTGAAGTTGCTCGATTTTATTTCGGGTTTTTCCGGGTA CGATTTGGATTGACATTATGTGTGTTTTTTCAAATACTAGTAGTTAGTATTTTGTACGATGGGCCGCGAAAATTACCCATGACCCGTGTTGATGAATGGAAAATTTTAAGTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CF310117             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GGTTCGTGAGCTACCAGAGGTCGTGCAAGTACATGCAGCAAGCCATTTCGGAGCTGCAATGACTAGTGCGCGTGCATTTTGGTGGTCTGGTGGTGATCGCGAGGTCCACTATTGTTTGTTCCGTCGGCACGATGAGAAGAGAAGTTATGGGCTGCTGCCCCGTCTTTTGTTGCGAGGCAGCCCTGGCTGAAGTTGCTCGATCTTATTTCGGGTTCTTCCGCGTA CGATTTGGATTGACATTATGTGTGTTCTTTCAAATACTAGTAGCTAGTATTTTGTACGATGGGCCGCGAAAATTAACCATGACCCGTGTTGATGAATGGAAAATTTTAAGTTGTTCAGATCAAAAAAAAAAAAAAAAAA       ]
[+] EMBL BM414926             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 aCGTACCGATTTGGATTGACATTATGTGTGTTCTTTCAAATACTAGTAGCTAGTATTTTGTACGATGGGCCGCGAAAATTAACCATGACCCGTGTTGATGAATGGAAAATTTTAAGTTGTTCA                             ]
[+] EMBL AU223079             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTTGGATTGACATTATGTGTGTTCTTTCAAATACTAGTAGCTAGTATTTTGTACGATGGGCCGCGAAAATTAACCATGACCCGTGTTGATGAATGGAAAATTTTAAGTTGTTCAaaaa                         ]
[+] EMBL BM414925             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       cnATTTGGATTGACATTATGTGTGTAGTTTCAAATACTAGTAGCTAGTATTTTGTACGATGGGCCGCGAAAATTAACCATGACCCGTGTTGATGAATGGAAAATTTTAAGTTGTTCA                             ]


>consensus_13392#0 ACTTTTCCTTCCACGCTAAGGCAAACAGCGCAACGCAGCACACAACACAAGCACTAGCTG CTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATCGAGCGAACAGCCATGAG GAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTGACCGCCAAGGCGTTTGG CATAGAGGAGGAGGTGTCGTTGGCCAGGGGCCAGTCGTTCAGGAAGGCCGACGGCGATCA CCTTGCGGTCTCGTTGTCGCACCCCAGCCCTTATACGTCTTTCGGCTATAAGCACAGCAG CAAGGGTCAGGTTATCCACTGGGTGAGCAAGCTGAGCAGAAGGGCACAGGGCTTCAGGGA GCATGTGACCTTGGGGCCAAAGCTGTCGGAGACGGTGAAGGGGAAGCTGAGCCTGGGCGC GAAAATCCTGCAGGCCGGCGGGATCGAGCGCGTGTTCCGGAAGGCGTTCTCGGCGGAGAA AGGCGAGCGGCTGGTGAAGGCGCTGCAGTGCTACCTGTACACCACCGGCGGGCCCATCGC CGGGATGCTCTTCGTCTCCACCAAGAAGGTCGCCTTCCGCAGCGACCGGCCGGTCACGGT CACCTCGGCCAAGGGCGACGTCGCGCGGGTGCCCTACAAGGTGGTGGTCCCGCTCAGGAG GATCGCCCAGGTGCGGCCGAGCGAGAATGCCGACAAGCCGGAGGAGAAGTACATCCACGT CGTCACGGTGGACGGCTTCGAGTTCTGGTTCATGGGGTTCGTGAGCTACCAGAGGTCGTG CAAGTACATGCAGCAAGCCATCTCGGAGCTGCAATGACTAGTGCGCGTGCATGTTGGTGG TCTGGTGGTGATCGCGAGGTCCACTATTGTTTGTTCCGTCGGCACGATGAGAAGAGAAGT TATGGGCTGCTGCGCCGTCTTTTGTTGCGAGGCAGCCCTGGCTGAAGTTGCTCGATCTTA TTTCGGGTTCTTCCGCGTACGATTTGGATTGACATTATGTGTGTTCTTTCAAATACTAGT AGCTAGTATTTTGTACGATGGGCCGCGAAAATTAACCATGACCCGTGTTGATGAATGGAA AATTTTAAGTTGTTCAGATCAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_13392#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 746
fasta sequence
                              [AACACAAGCACTAGCTGCTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATCGAGCGAACAGCCATGAGGAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTGACCGCCAAGGCGTTTGGCATAGAGGAGGAGGTGTCGTTGGCCAGGGGCCAGTCGTTCAGGAAGGCCGACGGCGATCACCTTGCGGTCTCGTTGTCGCACCCCAGCCCTTATACGTCTTTCGGCTATAAGCACAGCAGCAAGGGTCAGGTTATCCACTGGGTGAGCAAGCTGAGCAGAAGGGCACAGGGCTTCAGGGAGCATGGTGAGTTAGCGTTCATGCATGCATGTTTAATTCGCCATAAAAAAAAACTTGTTGATCATTAGGACTTAAGTGATGAACGCCGTGTCCTGATATATATCCATCACCGTGTGTAACGTGCAGTGACCTTGGGGCCAAAGCTGTCGGAGACGGTGAAGGGGAAGCTGAGCCTGGGCGCGAAAATCCTGCAGGCCGGCGGGATCGAGCGCGTGTTCCGGAAGGCGTTCTCGGCGGAGAAAGGCGAGCGGCTGGTGAAGGCGCTGCAGTGCTACCTGTACACCACCGGCGGGCCCATCGCCGGGATGCTCTTCGTCTCCACCAAGAAGGTCGCCTTCCGCAGCGACCGGCCGGTCACGGTCACCTCGGCCAAGGGCGACGTCGCGCGGGTGCCCTACAAGGTGGTGGTCCCGCTCAGGAGGATCGCCCA]

[+] EMBL CB655547             [AACACAAGCACTAGCTGCTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATCGAGCGAACAGCCATGAGGAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTGACCGCCAAGGCGTTTGGCATAGAGGAGGAGGTGTCGTTGGCCAGGGGCCAGTCGTTCAGGAAGGCCGACGGCGATCACCTTGCGGTCTCGTTGTCGCACCCCAGCCCTTATACGTCTTTCGGCTATAAGCACAGCAGCAAGGGTCAGGTTATCCACTGGGTGAGCAAGCTGAGCAGAAGGGCACAGGGCTTCAGGGAGCATGGTGAGTTAGCGTTCATGCATGCATGTTTAATTCGCCATAAAAAAAAACTTGTTGATCATTAGGACTTAAGTGATGAACGCCGTGTCCTGATATATATCCATCACCGTGTGTAACGTGCAGTGACCTTGGGGCCAAAGCTGTCGGAGACGGTGAAGGGGAAGCTGAGCCTGGGCGCGAAAATCCTGCAGGCCGGCGGGATCGAGCGCGTGTTCCGGAAGGCGTTCTCGGCGGAGAAAGGCGAGCGGCTGGTGAAGGCGCTGCAGTGCTACCTGTACACCACCGGCGGGCCCATCGCCGGGATGCTCTTCGTCTCCACCAAGAAGGTCGCCTTCCGCAGCGACCGGCCGGTCACGGTCACCTCGGCCAAGGGCGACGTCGCGCGGGTGCCCTACAAGGTGGTGGTCCCGCTCAGGAGGATCGCCCA]


>consensus_13392#1 AACACAAGCACTAGCTGCTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATC GAGCGAACAGCCATGAGGAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTG ACCGCCAAGGCGTTTGGCATAGAGGAGGAGGTGTCGTTGGCCAGGGGCCAGTCGTTCAGG AAGGCCGACGGCGATCACCTTGCGGTCTCGTTGTCGCACCCCAGCCCTTATACGTCTTTC GGCTATAAGCACAGCAGCAAGGGTCAGGTTATCCACTGGGTGAGCAAGCTGAGCAGAAGG GCACAGGGCTTCAGGGAGCATGGTGAGTTAGCGTTCATGCATGCATGTTTAATTCGCCAT AAAAAAAAACTTGTTGATCATTAGGACTTAAGTGATGAACGCCGTGTCCTGATATATATC CATCACCGTGTGTAACGTGCAGTGACCTTGGGGCCAAAGCTGTCGGAGACGGTGAAGGGG AAGCTGAGCCTGGGCGCGAAAATCCTGCAGGCCGGCGGGATCGAGCGCGTGTTCCGGAAG GCGTTCTCGGCGGAGAAAGGCGAGCGGCTGGTGAAGGCGCTGCAGTGCTACCTGTACACC ACCGGCGGGCCCATCGCCGGGATGCTCTTCGTCTCCACCAAGAAGGTCGCCTTCCGCAGC GACCGGCCGGTCACGGTCACCTCGGCCAAGGGCGACGTCGCGCGGGTGCCCTACAAGGTG GTGGTCCCGCTCAGGAGGATCGCCCA



consensusID : consensus_13392#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 355
fasta sequence
                              [ATGGGGTTTGTGAGCTACCAAAGGTTGTGCAAGTACATGCAGCAAGCCATTTTGGAGCTGCAATGAATAGTGGGCGGGCATGTTGGTGGTTTGGTGGTGATCGCGAGGTCCACTATTGTTTGTTCCGTCGGCCCGATTAAAAAAAAAGTTATGGGCTGCTGCCCCGTTTTTTGTTGCGAGGCAGCCCTGGCTGAAGTTGCTCGATTTTATTTCGGGTTTTTCCGGGTACGATTTGGATTGACATTATGTGTGTTTTTTCAAAAAATAGTAGGTAGTATTTTGTACGATGGGCCGCGAAAATTAACCATGACCCGTGTTGAAGAATGGAAAATTTTAAGTTGTTCCAAAAAAAAAA]

[-] EMBL CF310509             [ATGGGGTTTGTGAGCTACCAAAGGTTGTGCAAGTACATGCAGCAAGCCATTTTGGAGCTGCAATGAATAGTGGGCGGGCATGTTGGTGGTTTGGTGGTGATCGCGAGGTCCACTATTGTTTGTTCCGTCGGCCCGATTAAAAAAAAAGTTATGGGCTGCTGCCCCGTTTTTTGTTGCGAGGCAGCCCTGGCTGAAGTTGCTCGATTTTATTTCGGGTTTTTCCGGGTACGATTTGGATTGACATTATGTGTGTTTTTTCAAAAAATAGTAGGTAGTATTTTGTACGATGGGCCGCGAAAATTAACCATGACCCGTGTTGAAGAATGGAAAATTTTAAGTTGTTCCAAAAAAAAAA]


>consensus_13392#2 ATGGGGTTTGTGAGCTACCAAAGGTTGTGCAAGTACATGCAGCAAGCCATTTTGGAGCTG CAATGAATAGTGGGCGGGCATGTTGGTGGTTTGGTGGTGATCGCGAGGTCCACTATTGTT TGTTCCGTCGGCCCGATTAAAAAAAAAGTTATGGGCTGCTGCCCCGTTTTTTGTTGCGAG GCAGCCCTGGCTGAAGTTGCTCGATTTTATTTCGGGTTTTTCCGGGTACGATTTGGATTG ACATTATGTGTGTTTTTTCAAAAAATAGTAGGTAGTATTTTGTACGATGGGCCGCGAAAA TTAACCATGACCCGTGTTGAAGAATGGAAAATTTTAAGTTGTTCCAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13392#0      ACTTTTCCTTCCACGCTAAGGCAAACAGCGCAACGCAGCACACAACACAAGCACTAGCTG 60
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      CTCGATCTCGTGAGGCTCGTAGTAAGCACACTAGCTGCAGATCGAGCGAACAGCCATGAG 120
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      GAAGTCAAGCATCAACGGCGTCCATGTCATCGGAGTCCCGGTGACCGCCAAGGCGTTTGG 180
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      CATAGAGGAGGAGGTGTCGTTGGCCAGGGGCCAGTCGTTCAGGAAGGCCGACGGCGATCA 240
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      CCTTGCGGTCTCGTTGTCGCACCCCAGCCCTTATACGTCTTTCGGCTATAAGCACAGCAG 300
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      CAAGGGTCAGGTTATCCACTGGGTGAGCAAGCTGAGCAGAAGGGCACAGGGCTTCAGGGA 360
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      GCATGTGACCTTGGGGCCAAAGCTGTCGGAGACGGTGAAGGGGAAGCTGAGCCTGGGCGC 420
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      GAAAATCCTGCAGGCCGGCGGGATCGAGCGCGTGTTCCGGAAGGCGTTCTCGGCGGAGAA 480
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      AGGCGAGCGGCTGGTGAAGGCGCTGCAGTGCTACCTGTACACCACCGGCGGGCCCATCGC 540
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      CGGGATGCTCTTCGTCTCCACCAAGAAGGTCGCCTTCCGCAGCGACCGGCCGGTCACGGT 600
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      CACCTCGGCCAAGGGCGACGTCGCGCGGGTGCCCTACAAGGTGGTGGTCCCGCTCAGGAG 660
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      GATCGCCCAGGTGCGGCCGAGCGAGAATGCCGACAAGCCGGAGGAGAAGTACATCCACGT 720
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      ------------------------------------------------------------
                                                                                   

consensus_13392#0      CGTCACGGTGGACGGCTTCGAGTTCTGGTTCATGGGGTTCGTGAGC----TACCAGAGGT 776
consensus_13392#2      -------------------------------ATGGGGTTTGTGAGC----TACCAAAGGT 25
consensus_13392#1      --------------AACACAAGCACTAGCTGCTCGATCTCGTGAGGCTCGTAGTAAGCAC 46
                                                       * *   * *****     **  *     

consensus_13392#0      CGTGCAAGTACATGCAGCAAGCCATCTCGGAGCTGCAATGACTAGTGCGCGTGCATGTTG 836
consensus_13392#2      TGTGCAAGTACATGCAGCAAGCCATTTTGGAGCTGCAATGAATAGTGGGCGGGCATGTTG 85
consensus_13392#1      ACTAGCTGCAGATCGAGCGAACAGCCATGAGGAAGTCAAGCATCAACGGCGTCCATGTCA 106
                         *    * * **  *** * *      *  *  *  * *  *     ***  *****  

consensus_13392#0      GTGGTCTGGTGGTGATCGCGAGGTCCACTATTGTTT--------GTTCCGTCGGCA---- 884
consensus_13392#2      GTGGTTTGGTGGTGATCGCGAGGTCCACTATTGTTT--------GTTCCGTCGGCC---- 133
consensus_13392#1      TCGGAGTCCCGGTGACCGCCAAGGCGTTTGGCATAGAGGAGGAGGTGTCGTTGGCCAGGG 166
                         **  *   ***** *** * * *   *    *          **  *** ***     

consensus_13392#0      ------CGATGAGAAGAGAAGTTATGGGCTGCTGCGCCGTCTT-TTGTTGCGAGGCAGCC 937
consensus_13392#2      ------CGATTAAAAAAAAAGTTATGGGCTGCTGCCCCGTTTT-TTGTTGCGAGGCAGCC 186
consensus_13392#1      GCCAGTCGTTCAGGAAGGCCGACGGCGATCACCTTGCGGTCTCGTTGTCGCACCCCAGCC 226
                             ** * *  *     *     *    *    * ** *  **** **    *****

consensus_13392#0      CTGGCTGAAGTTGCTCGATCTTATTTCGGGTTCT-----TCCGCGTACGATTTGGATTGA 992
consensus_13392#2      CTGGCTGAAGTTGCTCGATTTTATTTCGGGTTTT-----TCCGGGTACGATTTGGATTGA 241
consensus_13392#1      CTTAT--ACGTCTTTCGGCTATAAGCACAGCAGCAAGGGTCAGGTTATCCACTGGGTGAG 284
                       **     * **   ***    **      *         ** *  **     *** *   

consensus_13392#0      CATTATGTGTGTTCTTTCAAATACTAGTAGCTAGTATTTTGTACGATGGGCCGCGAAAAT 1052
consensus_13392#2      CATTATGTGTGTTTTTTCAAAAAATAGTAGGTAGTATTTTGTACGATGGGCCGCGAAAAT 301
consensus_13392#1      CAAGCTGAGCAGAAGGGCACAGGGCTTCAGGGAGCATGGTGAGTTAGCGTTCATGCATGC 344
                       **   ** *        ** *       **  ** **  **    *  *  *  * *   

consensus_13392#0      TAACCATGACCCGTGTTGATGAATGGAAAATTTTAAGTTGTTCAGATCAAAAAAAAAAAA 1112
consensus_13392#2      TAACCATGACCCGTGTTGAAGAATGGAAAATTTTAAGTTGTTC----CAAAAAAAAAA-- 355
consensus_13392#1      -ATGTTTAATTCGCCATAAAAAA---AAACTTGTTGATCATTAGGACTTAAGTGATGAAC 400
                        *    * *  **   * *  **   *** ** *   *  **       **   *  *  

consensus_13392#0      AAAAAAAAAAAAA----------------------------------------------- 1125
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      GCCGTGTCCTGATATATATCCATCACCGTGTGTAACGTGCAGTGACCTTGGGGCCAAAGC 460
                                                                                   

consensus_13392#0      ------------------------------------------------------------
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      TGTCGGAGACGGTGAAGGGGAAGCTGAGCCTGGGCGCGAAAATCCTGCAGGCCGGCGGGA 520
                                                                                   

consensus_13392#0      ------------------------------------------------------------
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      TCGAGCGCGTGTTCCGGAAGGCGTTCTCGGCGGAGAAAGGCGAGCGGCTGGTGAAGGCGC 580
                                                                                   

consensus_13392#0      ------------------------------------------------------------
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      TGCAGTGCTACCTGTACACCACCGGCGGGCCCATCGCCGGGATGCTCTTCGTCTCCACCA 640
                                                                                   

consensus_13392#0      ------------------------------------------------------------
consensus_13392#2      ------------------------------------------------------------
consensus_13392#1      AGAAGGTCGCCTTCCGCAGCGACCGGCCGGTCACGGTCACCTCGGCCAAGGGCGACGTCG 700
                                                                                   

consensus_13392#0      ----------------------------------------------
consensus_13392#2      ----------------------------------------------
consensus_13392#1      CGCGGGTGCCCTACAAGGTGGTGGTCCCGCTCAGGAGGATCGCCCA 746
                                                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)