cluster # 13510

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Oryza sativa
cluster # 13510 cluster # 13510 Sequences # 13 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_13510#0 length = 2384 sequences # 12

consensus_13510#1 length = 471 sequences # 1

consensusID : consensus_13510#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2384
fasta sequence

                              [CTTTTTCTTCTTCTCGCTGAGCTCTACTACTGCACTACACTACCACTCTCTTCGCGTTCTCTCTCGCTGCAATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTGCGGCAGTGTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAATGAGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCT-GATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTC-AGACTTTCTACTAATACCATTC-AAGTCAAC-TGGAAGC-TTGTTC-AACAACAGTCGGGGAGTGG-TAAGCGGGATGCAT-GGAAGGAGAAATTGTCTTCAAATGCATTTGCTCGTAAGCTTTTCGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAGGGATACAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCCCATTTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAGTTATGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGCACCAGTTGAGTCCTCTCAGACGAACATAGCCATGGAAACTGAAAAATCAAGGCGAAACCCAAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAATGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCAAGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGACCCTACGGTAGAAACTATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTCACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAAT-GGTAAGTTGAACTCGCACTCGCCGCGTAC-ACAAAGGCCAACCCAT-GCTGGTGGCAAAGA--GGGA-GTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTT-CATCGATCGAGCACCAAATCCTCCTGTTGGGTTG-CGCAACATTCGGGTGGATG-ACG-ACG-ATG-ATGGCGTCTGCAGTTTGATCCA-ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT-TG-TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT-CCT-CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT-GATTTCCCTG-CCTCCCCGAGACA-CCCTGCTTTTGTT-GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT-ATCCCATTTGGAAATCTCTTCTGCGTTTTCTTCTTATAACTGACTAGCGAGTTGTGCCATGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101555             [CTTTTTCTTCTTCTCGCTGAGCTCTACTACTGCACTACACTACCACTCTCTTCGCGTTCTCTCTCGCTGCAATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTGCGGCAGTGTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAATGAGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCT GATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTC AGACTTTCTACTAATACCATTC AAGTCAAC TGGAAGC TTGTTC AACAACAGTCGGGGAGTGG TAAGCGGGATGCAT GGAAGGAGAAATTGTCTTCAAATGCATTTGCTCGTAAGCTTTTCGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAGGGATACAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCCCATTTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAGTTATGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGCACCAGTTGAGTCCTCTCAGACGAACATAGCCATGGAAACTGAAAAATCAAGGCGAAACCCAAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAATGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCAAGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGACCCTACGGTAGAAACTATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTCACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAAT GGTAAGTTGAACTCGCACTCGCCGCGTAC ACAAAGGCCAACCCAT GCTGGTGGCAAAGA  GGGA GTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTT CATCGATCGAGCACCAAATCCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCTGCAGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTC GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCATTTGGACATCTCTTCTGCGTTTTCTTCTTATAACTGACTAGCGAGTT                                                       ]
[+] EMBL AK101539             [                                           CACTCTCTTCGCGTTCTCTCTCGCTGCAATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTGCGGCAGTGTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAATGAGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCT GATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTC AGACTTTCTACTAATACCATTC AAGTCAAC TGGAAGC TTGTTC AACAACAGTCGGGGAGTGG TAAGCGGGATGCAT GGAAGGAGAAATTGTCTTCAAATGCATTTGCTCGTAAGCTTTTAGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAGGGATCCAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCCCATTTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAGTTATGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGCACCAGTTGAGTCCTCTCAGACGAACATAGCCATGGAAACTGAAAAATCAAGGCGAAACCCAAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAATGATAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCAAGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGACCCTACGGTAGAAACTATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTCACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAAT GGTAAGTTGAACTCGCACTCGCCGCGTAC ACAAAGGCCAACCCAT GCTGGTGGCAAAGA  GGGA GTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTT CATCGATCGAGCACCAAATCCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCTGCAGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCAT                                                                                                     ]
[+] EMBL C73765               [                                                                                                                                                                                                                                                                                                                                                                                                             ngnanGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCT GATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTCAAGACTTTCTACTAATACCATTCAAAGTCAACTTGGAAGCTTTGTTCAAACAACAGTCGGGGAGTGGTTAAGCGGGATTCATNGGAAGGNGAAATTTTCTTCAAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C99707               [                                                                                                                                                                                                                                                                                                                                                                                                          ggtngaagGGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCT GATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGGTAGGAATGTC AGACTTTCTACTAATACCATTC AAGTCAAC TGGAAGC TTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C73898               [                                                                                                                                                                                                                                                                                                                                                                                                             ttnggtGCTGTCCAGGAGGTTGGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCTGGNGAAGCAGAATACTNTCGTTTCCGATGCGTCCAACGACCCCGNGAGGTTGAGANAGGAACAAGCGGCCGTCAAGGCACAAGGTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCTGGATTCGTGGGCATCTCGTAAGGAGGCAAGCCGTTGCAACTCTTNGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA765075             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACTGAAAAAT NAGGCGAAACCCAAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAATGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCAAGTTGAAACTGAAGAAGAAGTTGCTGAACTGACTGTTGCTGATCCTGCGGTAGAAACTATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTTACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTNCCATCCTCTAATGGGTAAGNTGAACTCGCACTCGCCGCGTAC ACAAAGGCCAACCCATGGCTGGTGGCAAAGAAGGGGA GTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C99708               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              agnctaACATGGCTGCAACACAATNTGCGAAGGCGAAACTGCGGGGACAG ATTCACCCAGACTTAGTTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAAT GGTAAGTTGAACTCGCACTCGCCGCGTAC ACAAAGGCCAACCCAT GCTGGTGGCAAAGA  GGGA GTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTTCCATCGATCGAGCACCAAAACCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCTGCAGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCAaaaaaaaa                                                                                              ]
[+] EMBL BI805529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGAACTCGCACTCGCCGCGTACAACAAAGGCCAACCCAT GCT GTGTCAAAGA  GGGATGTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTT CATCGATCGAGCACC AATCCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCTGCAGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTTGATCCCATTTGGACATCTCTTCTGCGTTTTCTTCTTATAACTGACTAGCGAGTTGTGCCATGTCC                                            ]
[+] EMBL AU182700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGAATGGAAACGCTGAAGAGTT CATCGATCGAGCACCAAATCCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCTGCAGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCAaaaaaaaa                                                                                              ]
[+] EMBL BI808906             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAACGCTGAAGAGTT CATCGATCGAGCACC AATCCTCCTGTTGGGTTG CGCAACATTCGGGTGGATG ACG ACG ATG ATGGCGTCT CAGTTTGATCCACATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTTCTGCTATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTTCCCTCCTCCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTTGGATTT CCTGCCCTCCCCGAGACACCCCTGCTTTTGTTGGACCAAG                                                                                                                                                         ]
[+] EMBL C99553               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGGTTGNCGCAACATTCGGGTGGATGNACGCACGTATGNATGGCGTCTGCNGTTTGATCCA ATTGTTTTGCTTCCGATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTT CCT CTGCCATGTTCATGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCAaaaaaaaa                                                                                              ]
[+] EMBL AU033052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   gnTGCTTTGTTGTGGTT TG TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGNCCTTT CCT CTGCCATGTTCNTGTATAGCTGAAGCGTTTCCGGTTTGCTTTT GATTTCCCTG CCTCCCCGAGACA CCCTGCTTTTGTT GNGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTT ATCCCATTTGGANATNTCTTCTGNGTTTTCTTCTTATAACTGACTANNNTNTTGTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_13510#0
CTTTTTCTTCTTCTCGCTGAGCTCTACTACTGCACTACACTACCACTCTCTTCGCGTTCT
CTCTCGCTGCAATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGG
GAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAAC
CCTTGGGCGTGCGGCAGTGTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATC
CGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGAA
GGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCC
GGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAATGAGGCTGTCCAGGAGGTTGG
GAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGTGGTGCGCGATGTCAGTCAAGACCT
GGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGAGGA
ACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATTCCG
TGCGTTGAAAGGAATCATAAGACTCCAAGCCCTGATTCGTGGGCATCTCGTAAGGAGGCA
AGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCGTGG
TAGGAATGTCAGACTTTCTACTAATACCATTCAAGTCAACTGGAAGCTTGTTCAACAACA
GTCGGGGAGTGGTAAGCGGGATGCATGGAAGGAGAAATTGTCTTCAAATGCATTTGCTCG
TAAGCTTTTCGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAGGGA
TACAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCCCAT
TTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAGTTA
TGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGCACC
AGTTGAGTCCTCTCAGACGAACATAGCCATGGAAACTGAAAAATCAAGGCGAAACCCAAG
GAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGAGAA
GGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATCTAC
TCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAACTGC
AGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGAAAA
TGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTATCA
AGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGACCCTACGGTAGAAACTAT
GCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAGATC
CAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATTCTC
AACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTACAT
GGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTCACCCAGACTTAGTTC
TGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAATGGTAA
GTTGAACTCGCACTCGCCGCGTACACAAAGGCCAACCCATGCTGGTGGCAAAGAGGGAGT
GAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGCTGA
ATGGAAACGCTGAAGAGTTCATCGATCGAGCACCAAATCCTCCTGTTGGGTTGCGCAACA
TTCGGGTGGATGACGACGATGATGGCGTCTGCAGTTTGATCCAATTGTTTTGCTTCCGAT
GTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTTTGTAT
CTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTTCCTCTGCCATGTTCATG
TATAGCTGAAGCGTTTCCGGTTTGCTTTTGATTTCCCTGCCTCCCCGAGACACCCTGCTT
TTGTTGAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTTATCC
CATTTGGAAATCTCTTCTGCGTTTTCTTCTTATAACTGACTAGCGAGTTGTGCCATGTCC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_13510#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 471
fasta sequence

                              [ATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTGCGGCAGTNTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAANATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACAACTCATAACAATTAAGGCTTTCCAAGAGGTTTNGGAGGGGTNAAGATTCCANCTTACAAAGTGAAGTTGTTGGTNCGCATTTAAGTAAGACCTGGAGAAGAGATACTTTCGTTTCNATGNGTCCACGACCCCAGAGTTTANAAAGACAAGGGCC]

[+] EMBL OSS1762A             [ATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTGCGGCAGTNTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAANATTTATCGAAGGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGGAGCCGGTGCTCGTTACAACTCATAACAATTAAGGCTTTCCAAGAGGTTTNGGAGGGGTNAAGATTCCANCTTACAAAGTGAAGTTGTTGGTNCGCATTTAAGTAAGACCTGGAGAAGAGATACTTTCGTTTCNATGNGTCCACGACCCCAGAGTTTANAAAGACAAGGGCC]




>consensus_13510#1
ATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGGGAGCTAGGGTT
TTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAACCCTTGGGCGTG
CGGCAGTNTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATCCGTGCTCTTCG
GGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAANATTTATCGAAGGGCTCGAACA
ACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCCGGTGATATCGG
AGCCGGTGCTCGTTACAACTCATAACAATTAAGGCTTTCCAAGAGGTTTNGGAGGGGTNA
AGATTCCANCTTACAAAGTGAAGTTGTTGGTNCGCATTTAAGTAAGACCTGGAGAAGAGA
TACTTTCGTTTCNATGNGTCCACGACCCCAGAGTTTANAAAGACAAGGGCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13510#0      CTTTTTCTTCTTCTCGCTGAGCTCTACTACTGCACTACACTACCACTCTCTTCGCGTTCT 60
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      CTCTCGCTGCAATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGG 120
consensus_13510#1      -----------ATGGAGGCGTAGTGTTGGGAGGAGGGAGGGAGAGAGAGAGGGAGAGAGG 49
                                  *************************************************

consensus_13510#0      GAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAAC 180
consensus_13510#1      GAGCTAGGGTTTTTGGGCCGCCGCTGCCTCCTTGAGTTCGTCGTCCCTCCGGCTCCGAAC 109
                       ************************************************************

consensus_13510#0      CCTTGGGCGTGCGGCAGTGTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATC 240
consensus_13510#1      CCTTGGGCGTGCGGCAGTNTAGGCTCCAATGGGGAAGTCTCCGGCGAAGTGGATCAAATC 169
                       ****************** *****************************************

consensus_13510#0      CGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAAGATTTATCGAA 300
consensus_13510#1      CGTGCTCTTCGGGAAGAAGTCATCGAGGTCCGGCTCTACCAAGGCGAAANATTTATCGAA 229
                       ************************************************* **********

consensus_13510#0      GGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCC 360
consensus_13510#1      GGGCTCGAACAACAAAGGGTATGCTGCTGCTGGGAAGGATGCTGGGTTTGAGAGCTCCCC 289
                       ************************************************************

consensus_13510#0      GGTGATATCGGAGCCGGTGCTCGTTACACCTCATAACAAT-GAGGCTGTCCAGGAGGTT- 418
consensus_13510#1      GGTGATATCGGAGCCGGTGCTCGTTACAACTCATAACAATTAAGGCTTTCCAAGAGGTTT 349
                       **************************** ***********  ***** **** ****** 

consensus_13510#0      GGGAGGGGTGAGAATTCCAGCTTACAAGGTGAAGTGGT-GGTGCGCGATGTCAGTCAAGA 477
consensus_13510#1      NGGAGGGGTNAAGATTCCANCTTACAAAGTGAAGTTGTTGGTNCGC-ATTTAAGT-AAGA 407
                        ******** *  ****** ******* ******* ** *** *** ** * *** ****

consensus_13510#0      CCTGGAGAAGCAGAATACTGTCGTTTCCGATGCGTCCAACGACCCCGAGAGGTTGAGAGA 537
consensus_13510#1      CCTGGAGAAG--AGATACTTTCGTTTCN-ATGNGTCCA-CGACCCC-AGAGTTT---ANA 459
                       **********    ***** *******  *** ***** ******* **** **   * *

consensus_13510#0      GGAACAAGCGGCCGTCAAGGCACAAGCTGCCTTCCGAGGCTATCTGGCACGTCGGGCATT 597
consensus_13510#1      AAGACAAG-GGCC----------------------------------------------- 471
                          ***** ****                                               

consensus_13510#0      CCGTGCGTTGAAAGGAATCATAAGACTCCAAGCCCTGATTCGTGGGCATCTCGTAAGGAG 657
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      GCAAGCCGTTGCAACTCTTCGTGCAACATGGTTGATTGTGAAGTTTCAAGCTCTAGTCCG 717
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TGGTAGGAATGTCAGACTTTCTACTAATACCATTCAAGTCAACTGGAAGCTTGTTCAACA 777
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      ACAGTCGGGGAGTGGTAAGCGGGATGCATGGAAGGAGAAATTGTCTTCAAATGCATTTGC 837
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TCGTAAGCTTTTCGCTTCACCAATTCTGGTAGAGGCTCTCCATTTTCAATATGATGAGAG 897
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      GGATACAAATTCAGCCTTCAACTGGTTGGAGAGATGGACCATAGGTCGTGTCTGGAGGCC 957
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      CATTTCACATCCAAAGAGAGCTGCTGTTACTGATGCCAAGCCACACACAAGGAAGGCCAG 1017
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TTATGCAATGGAAACAGAGTCAGGGAAGTTGAAGCGCAATTCTCGGAGAAGTTCTGCTGC 1077
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      ACCAGTTGAGTCCTCTCAGACGAACATAGCCATGGAAACTGAAAAATCAAGGCGAAACCC 1137
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      AAGGAAATTCACTAGCTCTACTGCTGATTCAGTGCCCGAAAGTCAGTTAACTGAACTTGA 1197
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      GAAGGTCAAACGTAACCTTAGGAAGGTAACTAATTCTATGGCTGAGGCTTCAAAGGTATC 1257
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TACTCCTGCAACTGAGATCCCTGAACGCCAAGAGGTCCAATGTGAGAAACCACAGCGAAC 1317
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TGCAGAAGAAGTTCCAAATTATCCTGAGATCCAAGAACCTCAGAATGGTAATCTGTTGGA 1377
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      AAATGCTAAGACGGATATCCTGGTACCTGATCTTCAACCTGAACCGGAGGTTCCTTCTTA 1437
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TCAAGTTGAAACTGAAGAAAAAGTTGCTGAACTGACTGTTGCTGACCCTACGGTAGAAAC 1497
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TATGCCGCTGCAAGATATCCACAATGAAGAAAATGCTTTAGTAAATGATATGGAACAGAG 1557
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      ATCCAAAGAAGAACCTCTTTCTACTGAGAGCCTTAAAAGCAGCAAGAGGAGGTCTTCATT 1617
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      CTCAACCAAGACAGAGTATCCAGAAAATGGTTCAAAGAATTCGCCTGCTGTTCCCAGCTA 1677
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      CATGGCTGCAACACAATCTGCGAAGGCGAAACTGCGGGGACAGAATTCACCCAGACTTAG 1737
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TTCTGACTCTGCGGAGAAAAATGGCTTCACCAGGCGCCATTCCCTCCCATCCTCTAATGG 1797
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TAAGTTGAACTCGCACTCGCCGCGTACACAAAGGCCAACCCATGCTGGTGGCAAAGAGGG 1857
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      AGTGAAGGCTGACAAGTCTATGCTATCATCAAGAGACGCAAGTGAAAGACCTGCCAAAGC 1917
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TGAATGGAAACGCTGAAGAGTTCATCGATCGAGCACCAAATCCTCCTGTTGGGTTGCGCA 1977
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      ACATTCGGGTGGATGACGACGATGATGGCGTCTGCAGTTTGATCCAATTGTTTTGCTTCC 2037
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      GATGTAAAAAAGATGTTCTCCCCATCCGTGACAGTGAACCAGCTGCTTTGTTGTGGTTTG 2097
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TATCTGGTGCGATTTGACTTATTTCTATAGGGTTTTTGCGTCCTTTCCTCTGCCATGTTC 2157
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      ATGTATAGCTGAAGCGTTTCCGGTTTGCTTTTGATTTCCCTGCCTCCCCGAGACACCCTG 2217
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      CTTTTGTTGAGCAAGAGAGCTGCTGATGTTAGAGAGAACTTGTTGGATTGAACAATCTTA 2277
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TCCCATTTGGAAATCTCTTCTGCGTTTTCTTCTTATAACTGACTAGCGAGTTGTGCCATG 2337
consensus_13510#1      ------------------------------------------------------------
                                                                                   

consensus_13510#0      TCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2384
consensus_13510#1      -----------------------------------------------