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Oryza sativa
cluster # 13527 cluster # 13527       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_13527#0 length = 1436 sequences # 12  
consensus_13527#1 length = 389 sequences # 1  

consensusID : consensus_13527#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1436
fasta sequence
                              [CGCGGCCTCCGCTACCCGACGACGCCGCCGCGGCCCGCGTCATCTCCTTGGCTCGCCGCCTGCGCCGTCGTCGCGCCGGTCTCCGTCGCCGGGCGCCCTGCTGCTTCCATCGCATACTCTCGCCTCTGACCCCGAGTCCATCTCCCCGTCCCGGCGTCGCCTCGGCCTCGACTCCCGTCTCCTCGAGGAGTTCGCCCCGTCGCCTGCGGCCGATCTCCATCCATCCCGCGAGCGGCGGTGCGGTGTTCCTGCTGCTTCCGCCTCCGGGCGGGAGAGGGAGGAGCGGGTGACCATGGTGAGCATGGAGGTCACCGATGAGATGTTCAAGTGCATGGAGGTTGGGCTGGCCTTCCGGGACTATAATGGAAGAATCAGTTCTATGGATTTCCACAGCAAGGCTACAAATTACCTCGTGACAGCATGTGATGATGAATCAATTCGCCTATATGACATTCAAAATGCTGTGTGTTTGAAGACGATTAATAGCAAAAAATATGGGGTTGAGCTTGTGTGCTTCACTGAAAACCCAACTTATGTCTTGCATTCTTCAAAAAATGGATGGGATGATTCTCTCCGTCTACTCTCACTGGTCAATAACTGTTTTTTGAGATATTTCAAAGGCCATCTAGACAGGGTTGTTTCTATCTCATTGTGCTCTGAGAACGGGAACATTCTCTCTGGTTCACTTGATCGAACAGTTCTCCTATGGGATTCAAGGGTTGAAAAAGCACAGGGTTTGCTGCGTGTTCAGGGGAGGCCTGCAGTTTCTTATGATGATCAGGGTTTGGTTTTTGCAATTGCATATGGTGGCTACATAAGGATGTTTGATGCTCGAAATTTTGAGAAGGGGCCTTTTGATATTTTCTCTGTCGGTAATGATGATTCAGAAGCCAATGTCATAAAGTTCAGCAGTGATGGCAGGCGGCTTCTTTTAACCACCAAAGCTGGGCGTGTTCATGTGCTAGATTCATTTCA-TGGCAATAATATAGCAACATACAACGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCA-CAGATAGTGAGCCA-CCGCTAATTAGATGGGCTCCAGGATCTTTGATG-TTCTTGACTGCATCTTCGGAA-CTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGT-AATTCGAATGGTACGAGTTGTTGTTTGTGTATGCTCAGGCCTTTGTTCTAGCTGTTTGCAAAATGACAATGTTAGGTAAAAATCTGAGCTGCAGTGGGTCA-AGCCTCGGGTCAACCTAGTCCGGGCCATCTGCATATCTAAAACTTGCCCAATTTTGGCTTTACCCACAAAAAAAAA]

[+] EMBL AK072501             [CGCGGCCTCCGCTACCCGACGACGCCGCCGCGGCCCGCGTCATCTCCTTGGCTCGCCGCCTGCGCCGTCGTCGCGCCGGTCTCCGTCGCCGGGCGCCCTGCTGCTTCCATCGCATACTCTCGCCTCTGACCCCGAGTCCATCTCCCCGTCCCGGCGTCGCCTCGGCCTCGACTCCCGTCTCCTCGAGGAGTTCGCCCCGTCGCCTGCGGCCGATCTCCATCCATCCCGCGAGCGGCGGTGCGGTGTTCCTGCTGCTTCCGCCTCCGGGCGGGAGAGGGAGGAGCGGGTGACCATGGTGAGCATGGAGGTCACCGATGAGATGTTCAAGTGCATGGAGGTTGGGCTGGCCTTCCGGGACTATAATGGAAGAATCAGTTCTATGGATTTCCACAGCAAGGCTACAAATTACCTCGTGACAGCATGTGATGATGAATCAATTCGCCTATATGACATTCAAAATGCTGTGTGTTTGAAGACGATTAATAGCAAAAAATATGGGGTTGAGCTTGTGTGCTTCACTGAAAACCCAACTTATGTCTTGCATTCTTCAAAAAATGGATGGGATGATTCTCTCCGTCTACTCTCACTGGTCAATAACTGTTTTTTGAGATATTTCAAAGGCCATCTAGACAGGGTTGTTTCTATCTCATTGTGCTCTGAGAACGGGAACATTCTCTCTGGTTCACTTGATCGAACAGTTCTCCTATGGGATTCAAGGGTTGAAAAAGCACAGGGTTTGCTGCGTGTTCAGGGGAGGCCTGCAGTTTCTTATGATGATCAGGGTTTGGTTTTTGCAATTGCATATGGTGGCTACATAAGGATGTTTGATGCTCGAAATTTTGAGGAGGGGCCTTTTGATATTTTCTCTGTCGGTAATGATGATTCAGAAGCCAATGTCATAAAGTTCAGCAGTGATGGCAGGCGGCTTCTTTTAACCACCAAAGCTGGGCGTGTTCATGTGCTAGATTCATTTCA TGGCAATAATATAGCAACATACAACGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCA CAGATAGTGAGCCA CCGCTAATTAGATGGGCTCCAGGATCTTTGATG TTCTTGACTGCATCTTCGGAA CTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGT AATTCGAATGGTACGAGTTGTTGTTTGTGTATGCTCAGGCCTTTGTTCTAGCTGTTTGCAAAATGACAATGTTAGGTAAAAATCTGAGCTGCAGTGGGTCA A                                                                           ]
[+] EMBL AK104756             [   GGCCTCCGCTACCCGACGACGCCGCCGCGGCCCGCGTCATCTCCTTGGCTCGCCGCCTGCGCCGTCGTCGCGCCGGTCTCCGTCGCCGGGCGCCCTGCTGCTTCCATCGCATACTCTCGCCTCTGACCCCGAGTCCATCTCCCCGTCCCGGCGTCGCCTCGGCCTCGACTCCCGTCTCCTCGAGGAGTTCGCCCCGTCGCCTGCGGCCGATCTCCATCCATCCCGCGAGCGGCGGTGCGGTGTTCCTGCTGCTTCCGCCTCCGGGCGGGAGAGGGAGGAGCGGGTGACCATGGTGAGCATGGAGGTCACCGATGAGATGTTCAAGTGCATGGAGGTTGGGCTGGCCTTCCGGGACTATAATGGAAGAATCAGTTCTATGGATTTCCACAGCAAGGCTACAAATTACCTCGTGACAGCATGTGATGATGAATCAATTCGCCTATATGACATTCAAAATGCTGTGTGTTTGAAGACGATTAATAGCAAAAAATATGGGGTTGAGCTTGTGTGCTTCACTGAAAACCCAACTTATGTCTTGCATTCTTCAAAAAATGGATGGGATGATTCTCTCCGTCTACTCTCACTGGTCAATAACTGTTTTTTGAGATATTTCAAAGGCCATCTAGACAGGGTTGTTTCTATCTCATTGTGCTCTGAGAACGGGAACATTCTCTCTGGTTCACTTGATCGAACAGTTCTCCTATGGGATTCAAGGGTTGAAAAAGCACAGGGTTTGCTGCGTGTTCAGGGGAGGCCTGCAGTTTCTTATGATGATCAGGGTTTGGTTTTTGCAATTGCATATGGTGGCTACATAAGGATGTTTGATGCTCGAAATTTTGAGAAGGGGCCTTTTGATATTTTCTCTGTCGGTAATGATGATTCAGAAGCCAATGTCATAAAGTTCAGCAGTGATGGCAGGCGGCTTCTTTTAACCACCAAAGCTGGGCGTGTTCATGTGCTAGATTCATTTCA TGGCAATAATATAGCAACATACAACGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCA CAGATAGTGAGCCA CCGCTAATTAGATGGGCTCCAGGATCTTTGATG TTCTTGACTGCATCTTCGGAA CTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGT AATTCGAATGGTACGAGTTGTTGTTTGTGTATGCTCAGGCCTTTGTTCT                                                                                                                                 ]
[+] EMBL AK104617             [   GGCCTCCGCTACCCGACGACGCCGCCGCGGCCCGCGTCATCTCCTTGGCTCGCCGCCTGCGCCGTCGTCGCGCCGGTCTCCGTCGCCGGGCGCCCTGCTGCTTCCATCGCATACTCTCGCCTCTGACCCCGAGTCCATCTCCCCGTCCCGGCGTCGCCTCGGCCTCGACTCCCGTCTCCTCGAGGAGTTCGCCCCGTCGCCTGCGGCCGATCTCCATCCATCCCGCGAGCGGCGGTGCGGTGTTCCTGCTGCTTCCGCCTCCGGGCGGGAGAGGGAGGAGCGGGTGACCATGGTGAGCATGGAGGTCACCGATGAGATGTTCAAGTGCATGGAGGTTGGGCTGGCCTTCCGGGACTATAATGGAAGAATCAGTTCTATGGATTTCCACAGCAAGGCTACAAATTACCTCGTGACAGCATGTGATGATGAATCAATTCGCCTATATGACATTCAAAATGCTGTGTGTTTGAAGACGATTAATAGCAAAAAATATGGGGTTGAGCTTGTGTGCTTCACTGAAAACCCAACTTATGTCTTGCATTCTTCAAAAAATGGATGGGATGATTCTCTCCGTCTACTCTCACTGGTCAATAACTGTTTTTTGAGATATTTCAAAGGCCATCTAGACAGGGTTGTTTCTATCTCATTGTGCTCTGAGAACGGGAACATTCTCTCTGGTTCACTTGATCGAACAGTTCTCCTATGGGATTCAAGGGTTGAAAAAGCACAGGGTTTGCTGCGTGTTCAGGGGAGGCCTGCAGTTTCTTATGATGATCAGGGTTTGGTTTTTGCAATTGCATATGGTGGCTACATAAGGATGTTTGATGCTCGAAATTTTGAGAAGGGGCCTTTTGATATTTTCTCTGTCGGTAATGATGATTCAGAAGCCAATGTCATAAAGTTCAGCAGTGATGGCAGGCGGCTTCTTTTAACCACCAAAGCTGGGCGTGTTCATGTGCTAGATTCATTTCA TGGCAATAATATAGCAACATACAACGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCA CAGATAGTGAGCCA CCGCTAATTAGATGGGCTCCAGGATCTTTGATG TTCTTGACTGCATCTTCGGAA CTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGT AATTCGAATGGTACGAGTTGTTGTTTGTGTATGCTCAGGCCTTTGTTCT                                                                                                                                 ]
[+] EMBL CF307283             [                                                                                                                                                                                                                                                                                                                              GATGTTCAAGTGCATGGAGGTTGGGCTGGCCTTCCGGGACTATAATGGAAGAATCAGTTCTATGGATTTCCACAGCAAGGCTACAAATTACCTCGTGACAGCATGTGATGATGAATCAATTCGCCTATATGACATTCAAAATGCTGTGTGTTTGAAGACGATTAATAGCAAAAAATATGGGGTTGAGCTTGTGTGCTTCACTGAAAACCCAACTTATGTCTTGCATTCTTCAAAAAATGGATGGGATGATTCTCTCCGTCTACTCTCACTGGTCAATAACTGTTTTTTGAGATATTTCAAAGGCCATCTAGACAGGGTTGTTTCTATCTCATTGTGCTCTGAGAACGGGAACATTCTCTCTGGTTCACTTGATCGAACAGTTCTCCTATGGGATTCAAGGGTTGAAAAAGCACAGGGTTTGCTGCGTGTTCAGGGGAGGCCTGCAGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL OSR26771A            [                                                                                                                                                                                                                                                                                                                                                                                                              gTACAAATTACCTCGTTACAGCATGTNATGATGAATCAATTCGCCTATATGACATTCAAAATGCTGTGTGTTTGAAGACGATTAATAGCAAAAAATATGGGGTTGAGCTTGTNTGCTTCACTGAAAACCCAACTTATGTCTTGCATTCTTCAAAAAATGGATGGGATGATTCTCTCCGTCTACTCTCACTGGTCAATAACTGTTTTTTGAGATATTTCAAAGGCCATCTAGACAGGGTTGTTTCTATCTCATTGTGCTCTGAGAACGGGAACATTCTCTCTGGTTCACTTGATCGAACAGTTCTCCTATGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AA750741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTAGACAGGGTTGTTTCTATATAATTGTGCTCTGAGAACGGGAACATTCTCTCTGGTTCACTTGATCGAACAGTTCTCCTATGGGATTCAAGGGTTGAAAAAGCACAGGGTTTGCTGCGTGTTCAGGGGAGGCCTGCAGTTTCTTATGATGATCAGGGTTTGGTTTTTGCAATTGCATATGGTGGCTACATAAGGATGTTTGATGCTCGAAATTTTGAGAAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI799733             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTGAGAA GGGCCTTTGGATATTTTCTCTGTCGGTAATGATGATTCAGAAGCCAATGTCATAAAGTTCAGCAGTGATGGCAGGCGGCTTCTTTTAACCACC AAGCTGGGCGTGTTCATGTGCTAGATTCATTTCA TGGCAATAATATAGCAACATAC ATGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCACCAGATAGTGAGCCACCCGCTAATTAGATGGGCTCCAGGATCTTTGATG TTCTTGACTGCATCTTCGGAACCTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGT AATTCGAATGGTACGAGTTGTTGTTTGTGTATGCTCAGGCCTTTGTTCTAGCTGTTTGC AAATGAC ATGTTAGGTAAAAATCTGAGCTGCAGTGGGTCACAGCCTCGGGTCAACCTAGTCCGGGCCATCTGCAAAAAAAAAA                                  ]
[+] EMBL OS1321931            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTGATATTTNCTCTGTCGGTAATGATGATTCANAAGCCAATGTCATAAAGTTCAGCAGTGATGGCAGGCGGCTTCTTTTAACCACCAAAGCTGGGCGTGTTCATGTGCTAGATTCATTTCA TGGCAATAATATAGCAACATACAACGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCA CAGATAGTGAGCCA CCGCTAATTAGATGGGCTCCAGGATCTTTGATGTTTCTTGANTGCATCTTCGGAA CTGT                                                                                                                                                                                                                                      ]
[+] EMBL AK058328             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGATATTTTCTCTGTCGGTAATGATGATTCAGAAGCCAATGTCATAAAGTTCAGCAGTGATGGCAGGCGGCTTCTTTTAACCACCAAAGCTGGGCGTGTTCATGTGCTAGATTCATTTCA TGGCAATAAT    CAACATACAACGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCA CAGATAGTGAGCCA CCGCTAATTAGATGGGCTCCAGGATCTTTGATG TTCTTGACTGCATCTTCGGAA CTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGT AATTCGAATGGTACGAGTTGTTGTTTGTGTATGCTCAGGCCTTTGTTCTAGCTGTTTGCAAAATGACAATGTTAGGTAAAAATCTGAGCTGCAGTGGGTCA AGCCTCGGGTCAACCTAGTCCGGGCCATCTGCATATCT                                      ]
[+] EMBL CA756848             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGGTAATGATGATTCAGAAGCCAATGTCATAAAGTTCAGCAGTGATGGCAGGCGGCTTCTTTTAACCACCAAAGCTGGGCGTGTTCATGTGCTAGATTCATTTCA TGGCAATAATATAGCAACATACAATGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCA CAGATAGTGAGCCA CCGCTAATTAGATGGGCTCCAGGATCTTTGATG TTCTTGACTGCATCTTCGGAA CTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGT AATTCGAATGGTACGAGTTGTTGTTT                                                                                                                                                        ]
[+] EMBL BI797697             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGATTCAGAA CCAATGTCATAAAGTTCACCAGTGAT GCAGGCGGCTTCTTTTAACCACC AAGCTGGGCGTGTTCATGTGCTAGATTCATTTCACTGGC ATAATATAGC ACATACAATGTGAA CCAGTGGTAA CAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCA CAGATAGTGAGCCACCCGCTAATTAGATGGGCTCCAGGATCTTTGATG TTCTTGACTGCATCTTCGGAA CTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGTCAATTCGAATGGTACGAGTTGTTGTTTGTGTATGCTCAGGCCTTTGTTCTAGCTGTTTGC AAATGACAATGTTAGGTAAAAATCTGAGCTGCA TGGGTCA AGCCTCGGGTCAACCTAGTCCGGGCCATCTGCATATCTTGATCTTGCCCAATTTTGGCTTTACCCACAAAAAAAAA]
[+] EMBL AU031929             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TAAAGTTCAGCANTGATGGCAGGCGGCTTCTTTTAACCACCAAAGCTGGGCGTGTTCATGTGCTAGATTCATTTCA TGGCAATAATATAGCAACATACAACGTGAANCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCA CAGATAGTGAGCCA CCGCTAATTAGATGGGCTCCAGGATCTTTGATG TTCTTGACTGCATCTTCGGAA CTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGT AATTCGAATGGTACGAGTTGTTGTTTGTGTATGCTCAGGCCTTTGTTCTAGCTGTTTGCAAAATGACAATGTTAGGTAAAAAaa                                                                                              ]


>consensus_13527#0 CGCGGCCTCCGCTACCCGACGACGCCGCCGCGGCCCGCGTCATCTCCTTGGCTCGCCGCC TGCGCCGTCGTCGCGCCGGTCTCCGTCGCCGGGCGCCCTGCTGCTTCCATCGCATACTCT CGCCTCTGACCCCGAGTCCATCTCCCCGTCCCGGCGTCGCCTCGGCCTCGACTCCCGTCT CCTCGAGGAGTTCGCCCCGTCGCCTGCGGCCGATCTCCATCCATCCCGCGAGCGGCGGTG CGGTGTTCCTGCTGCTTCCGCCTCCGGGCGGGAGAGGGAGGAGCGGGTGACCATGGTGAG CATGGAGGTCACCGATGAGATGTTCAAGTGCATGGAGGTTGGGCTGGCCTTCCGGGACTA TAATGGAAGAATCAGTTCTATGGATTTCCACAGCAAGGCTACAAATTACCTCGTGACAGC ATGTGATGATGAATCAATTCGCCTATATGACATTCAAAATGCTGTGTGTTTGAAGACGAT TAATAGCAAAAAATATGGGGTTGAGCTTGTGTGCTTCACTGAAAACCCAACTTATGTCTT GCATTCTTCAAAAAATGGATGGGATGATTCTCTCCGTCTACTCTCACTGGTCAATAACTG TTTTTTGAGATATTTCAAAGGCCATCTAGACAGGGTTGTTTCTATCTCATTGTGCTCTGA GAACGGGAACATTCTCTCTGGTTCACTTGATCGAACAGTTCTCCTATGGGATTCAAGGGT TGAAAAAGCACAGGGTTTGCTGCGTGTTCAGGGGAGGCCTGCAGTTTCTTATGATGATCA GGGTTTGGTTTTTGCAATTGCATATGGTGGCTACATAAGGATGTTTGATGCTCGAAATTT TGAGAAGGGGCCTTTTGATATTTTCTCTGTCGGTAATGATGATTCAGAAGCCAATGTCAT AAAGTTCAGCAGTGATGGCAGGCGGCTTCTTTTAACCACCAAAGCTGGGCGTGTTCATGT GCTAGATTCATTTCATGGCAATAATATAGCAACATACAACGTGAAGCCAGTGGTAAGCAA TTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGA TGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCACAGA TAGTGAGCCACCGCTAATTAGATGGGCTCCAGGATCTTTGATGTTCTTGACTGCATCTTC GGAACTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGTA ATTCGAATGGTACGAGTTGTTGTTTGTGTATGCTCAGGCCTTTGTTCTAGCTGTTTGCAA AATGACAATGTTAGGTAAAAATCTGAGCTGCAGTGGGTCAAGCCTCGGGTCAACCTAGTC CGGGCCATCTGCATATCTAAAACTTGCCCAATTTTGGCTTTACCCACAAAAAAAAA



consensusID : consensus_13527#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 389
fasta sequence
                              [TTTAACCACCCAAAAGGCTGGNCGTGTTCATGTGCTNAGGAATTCATTTCAAATGGCAATAAATAATAGCCAACCATTACAACGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCACAGATAGTGAGCCACCGCTAATTAGATGGGCTCCAGGATCTTTGATGTTCTTGACTGCATCTTCGGAACTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGTAATTCGAATGGTACGAGTTGTTGTTTGTGTAAAAAAAAAAAAAAAAA]

[+] EMBL AU161952             [TTTAACCACCCAAAAGGCTGGNCGTGTTCATGTGCTNAGGAATTCATTTCAAATGGCAATAAATAATAGCCAACCATTACAACGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCACAGATAGTGAGCCACCGCTAATTAGATGGGCTCCAGGATCTTTGATGTTCTTGACTGCATCTTCGGAACTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGTAATTCGAATGGTACGAGTTGTTGTTTGTGTAAAAAAAAAAAAAAAAA]


>consensus_13527#1 TTTAACCACCCAAAAGGCTGGNCGTGTTCATGTGCTNAGGAATTCATTTCAAATGGCAAT AAATAATAGCCAACCATTACAACGTGAAGCCAGTGGTAAGCAATTCGACGCTGGAAGCAT CATTCAGCCCTGATGGAAACCATATAATATCTGGCTCTGGTGATGGCAGTGTATATGCTT GGAATGTTAGGAGTGGAAAGGTTGCTCGCTGGGGAAGCACAGATAGTGAGCCACCGCTAA TTAGATGGGCTCCAGGATCTTTGATGTTCTTGACTGCATCTTCGGAACTGTCTTGTTGGG TCCCTGATCTATCTAAGCTGGGATCCTTTACTGTTAGTAAGTAATTCGAATGGTACGAGT TGTTGTTTGTGTAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_13527#0      CGCGGCCTCCGCTACCCGACGACGCCGCCGCGGCCCGCGTCATCTCCTTGGCTCGCCGCC 60
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      TGCGCCGTCGTCGCGCCGGTCTCCGTCGCCGGGCGCCCTGCTGCTTCCATCGCATACTCT 120
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      CGCCTCTGACCCCGAGTCCATCTCCCCGTCCCGGCGTCGCCTCGGCCTCGACTCCCGTCT 180
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      CCTCGAGGAGTTCGCCCCGTCGCCTGCGGCCGATCTCCATCCATCCCGCGAGCGGCGGTG 240
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      CGGTGTTCCTGCTGCTTCCGCCTCCGGGCGGGAGAGGGAGGAGCGGGTGACCATGGTGAG 300
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      CATGGAGGTCACCGATGAGATGTTCAAGTGCATGGAGGTTGGGCTGGCCTTCCGGGACTA 360
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      TAATGGAAGAATCAGTTCTATGGATTTCCACAGCAAGGCTACAAATTACCTCGTGACAGC 420
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      ATGTGATGATGAATCAATTCGCCTATATGACATTCAAAATGCTGTGTGTTTGAAGACGAT 480
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      TAATAGCAAAAAATATGGGGTTGAGCTTGTGTGCTTCACTGAAAACCCAACTTATGTCTT 540
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      GCATTCTTCAAAAAATGGATGGGATGATTCTCTCCGTCTACTCTCACTGGTCAATAACTG 600
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      TTTTTTGAGATATTTCAAAGGCCATCTAGACAGGGTTGTTTCTATCTCATTGTGCTCTGA 660
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      GAACGGGAACATTCTCTCTGGTTCACTTGATCGAACAGTTCTCCTATGGGATTCAAGGGT 720
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      TGAAAAAGCACAGGGTTTGCTGCGTGTTCAGGGGAGGCCTGCAGTTTCTTATGATGATCA 780
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      GGGTTTGGTTTTTGCAATTGCATATGGTGGCTACATAAGGATGTTTGATGCTCGAAATTT 840
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      TGAGAAGGGGCCTTTTGATATTTTCTCTGTCGGTAATGATGATTCAGAAGCCAATGTCAT 900
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      AAAGTTCAGCAGTGATGGCAGGCGGCTTCTTTTAACCACC---AAAGCTGGGCGTGTTCA 957
consensus_13527#1      ------------------------------TTTAACCACCCAAAAGGCTGGNCGTGTTCA 30
                                                     **********   ** ***** ********

consensus_13527#0      TGTGCTAG---ATTCATTTCA--TGGCAATAAT--ATAGCAA--CAT-ACAACGTGAAGC 1007
consensus_13527#1      TGTGCTNAGGAATTCATTTCAAATGGCAATAAATAATAGCCAACCATTACAACGTGAAGC 90
                       ******     **********  *********   ***** *  *** ************

consensus_13527#0      CAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATAT 1067
consensus_13527#1      CAGTGGTAAGCAATTCGACGCTGGAAGCATCATTCAGCCCTGATGGAAACCATATAATAT 150
                       ************************************************************

consensus_13527#0      CTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCT 1127
consensus_13527#1      CTGGCTCTGGTGATGGCAGTGTATATGCTTGGAATGTTAGGAGTGGAAAGGTTGCTCGCT 210
                       ************************************************************

consensus_13527#0      GGGGAAGCACAGATAGTGAGCCACCGCTAATTAGATGGGCTCCAGGATCTTTGATGTTCT 1187
consensus_13527#1      GGGGAAGCACAGATAGTGAGCCACCGCTAATTAGATGGGCTCCAGGATCTTTGATGTTCT 270
                       ************************************************************

consensus_13527#0      TGACTGCATCTTCGGAACTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTA 1247
consensus_13527#1      TGACTGCATCTTCGGAACTGTCTTGTTGGGTCCCTGATCTATCTAAGCTGGGATCCTTTA 330
                       ************************************************************

consensus_13527#0      CTGTTAGTAAGTAATTCGAATGGTACGAGTTGTTGTTTGTGTATGCTCAGGCCTTTGTTC 1307
consensus_13527#1      CTGTTAGTAAGTAATTCGAATGGTACGAGTTGTTGTTTGTGTAAAAAAAAAAAAAAAAA- 389
                       *******************************************     *           

consensus_13527#0      TAGCTGTTTGCAAAATGACAATGTTAGGTAAAAATCTGAGCTGCAGTGGGTCAAGCCTCG 1367
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      GGTCAACCTAGTCCGGGCCATCTGCATATCTAAAACTTGCCCAATTTTGGCTTTACCCAC 1427
consensus_13527#1      ------------------------------------------------------------
                                                                                   

consensus_13527#0      AAAAAAAAA 1436
consensus_13527#1      ---------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)